Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005906.t1 | XP_003591867.2 | 97.7 | 388 | 9 | 0 | 1 | 388 | 19 | 406 | 3.20E-208 | 734.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005906.t1 | A8JGB0 | 52.3 | 384 | 172 | 4 | 13 | 388 | 54 | 434 | 1.8e-106 | 387.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005906.t1 | G7I505 | 97.7 | 388 | 9 | 0 | 1 | 388 | 19 | 406 | 2.3e-208 | 734.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene005906 | MS.gene019441 | PPI |
| MS.gene005906 | MS.gene36919 | PPI |
| MS.gene005906 | MS.gene63700 | PPI |
| MS.gene37554 | MS.gene005906 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005906.t1 | MTR_1g094680 | 97.680 | 388 | 9 | 0 | 1 | 388 | 19 | 406 | 0.0 | 772 |
| MS.gene005906.t1 | MTR_1g094680 | 97.714 | 350 | 8 | 0 | 39 | 388 | 8 | 357 | 0.0 | 699 |
| MS.gene005906.t1 | MTR_1g094680 | 96.990 | 299 | 9 | 0 | 1 | 299 | 19 | 317 | 0.0 | 592 |
| MS.gene005906.t1 | MTR_1g094680 | 98.354 | 243 | 4 | 0 | 57 | 299 | 1 | 243 | 6.92e-177 | 492 |
| MS.gene005906.t1 | MTR_4g058005 | 66.762 | 349 | 111 | 3 | 40 | 388 | 38 | 381 | 2.15e-174 | 491 |
| MS.gene005906.t1 | MTR_8g032880 | 31.731 | 312 | 172 | 11 | 75 | 380 | 32 | 308 | 6.41e-35 | 132 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene005906.t1 | AT3G10350 | 83.836 | 365 | 58 | 1 | 24 | 388 | 48 | 411 | 0.0 | 606 |
| MS.gene005906.t1 | AT3G10350 | 83.046 | 348 | 49 | 3 | 41 | 388 | 96 | 433 | 0.0 | 563 |
| MS.gene005906.t1 | AT5G60730 | 64.957 | 351 | 118 | 2 | 39 | 388 | 45 | 391 | 2.24e-150 | 431 |
| MS.gene005906.t1 | AT1G01910 | 32.588 | 313 | 168 | 10 | 75 | 380 | 31 | 307 | 4.35e-36 | 135 |
| MS.gene005906.t1 | AT1G01910 | 32.588 | 313 | 168 | 10 | 75 | 380 | 31 | 307 | 4.35e-36 | 135 |
| MS.gene005906.t1 | AT1G01910 | 32.588 | 313 | 168 | 10 | 75 | 380 | 31 | 307 | 4.35e-36 | 135 |
| MS.gene005906.t1 | AT1G01910 | 31.922 | 307 | 166 | 10 | 75 | 374 | 31 | 301 | 2.26e-34 | 129 |
| MS.gene005906.t1 | AT1G01910 | 32.961 | 179 | 109 | 4 | 208 | 380 | 30 | 203 | 8.19e-22 | 94.0 |
Find 105 sgRNAs with CRISPR-Local
Find 242 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGTTCCTGCTCTCAAATTTC+TGG | 0.056203 | 1.1:+68061716 | MS.gene005906:CDS |
| ATTGTCCTTGCCTGATTTCT+TGG | 0.156940 | 1.1:+68060471 | MS.gene005906:CDS |
| AATTTCTGGGTGACATTATC+TGG | 0.197363 | 1.1:+68061730 | MS.gene005906:CDS |
| GCTAAAACTGGGAGAGTTAC+TGG | 0.276118 | 1.1:+68060146 | MS.gene005906:CDS |
| TTCCTCCTTTGTTTCTTTGC+GGG | 0.295641 | 1.1:+68058136 | MS.gene005906:CDS |
| GCTGTTAAATTTGCAAATAA+TGG | 0.303414 | 1.1:+68058980 | MS.gene005906:CDS |
| CTTCAATGAGGCACTCAATC+TGG | 0.311076 | 1.1:-68061326 | None:intergenic |
| GGGTTTGACGACATGGTTGC+TGG | 0.323204 | 1.1:+68058887 | MS.gene005906:CDS |
| CGAGATGCAGCTAAACAAAA+TGG | 0.335305 | 1.1:+68059378 | MS.gene005906:CDS |
| GATGGTACAGGCTGACAAAT+TGG | 0.357327 | 1.1:+68060878 | MS.gene005906:intron |
| TTTCATGGATGGCATGGGTC+TGG | 0.364125 | 1.1:+68059422 | MS.gene005906:CDS |
| TGCTCCTACAGAATCTATAT+CGG | 0.365031 | 1.1:+68058865 | MS.gene005906:CDS |
| AAATCTTCCCTAGCCTTCTC+AGG | 0.365946 | 1.1:-68059354 | None:intergenic |
| CTTCCTCCTTTGTTTCTTTG+CGG | 0.381578 | 1.1:+68058135 | MS.gene005906:CDS |
| GTTCCTGCTCTCAAATTTCT+GGG | 0.399883 | 1.1:+68061717 | MS.gene005906:CDS |
| AACAAATTCAATGGCCATCA+AGG | 0.400889 | 1.1:+68058061 | None:intergenic |
| TACTGGAGTCAAAGATTTCA+TGG | 0.405795 | 1.1:+68059407 | MS.gene005906:CDS |
| TGGAAAGGAAAGAGAGGAGA+TGG | 0.408201 | 1.1:-68058107 | None:intergenic |
| CTGACAAATTGGAGAAGCTT+AGG | 0.410433 | 1.1:+68060889 | MS.gene005906:CDS |
| ATCGATAAGCTGGAGAGTTC+TGG | 0.417848 | 1.1:-68061657 | None:intergenic |
| AAAGTTAGGAGAGCTAAAAC+TGG | 0.426921 | 1.1:+68060134 | MS.gene005906:intron |
| TCTGCAATTAAATCTGTGTT+CGG | 0.431700 | 1.1:+68060759 | MS.gene005906:CDS |
| GAATGAGAGAGCACCCTTGA+TGG | 0.444301 | 1.1:-68058075 | None:intergenic |
| AAACAAAATGGTGGAACTAC+TGG | 0.445147 | 1.1:+68059390 | MS.gene005906:CDS |
| AGAGAGGAGATGGGGTGGGA+TGG | 0.446643 | 1.1:-68058097 | None:intergenic |
| CACTCGAATTATATTTGATA+CGG | 0.449214 | 1.1:+68060340 | MS.gene005906:CDS |
| ATGGATGCATCCAAGAAATC+AGG | 0.451659 | 1.1:-68060481 | None:intergenic |
| TTCATGGATGGCATGGGTCT+GGG | 0.454327 | 1.1:+68059423 | MS.gene005906:CDS |
| AGAGCGAAAAGTGGATAATC+AGG | 0.455173 | 1.1:-68059207 | None:intergenic |
| CTGCAATTAAATCTGTGTTC+GGG | 0.456881 | 1.1:+68060760 | MS.gene005906:CDS |
| CAGTGGAAACGACGAGAGTC+GGG | 0.461919 | 1.1:-68059006 | None:intergenic |
| AGACTTGGTGGGTTGCTTAG+TGG | 0.463437 | 1.1:-68058162 | None:intergenic |
| GCTCCTACAGAATCTATATC+GGG | 0.467326 | 1.1:+68058866 | MS.gene005906:CDS |
| GGAAAGGAAAGAGAGGAGAT+GGG | 0.467551 | 1.1:-68058106 | None:intergenic |
| ACATGCTAGGTGGGAAAGGA+GGG | 0.481081 | 1.1:+68058927 | MS.gene005906:CDS |
| CAACATCAACAAGTGGTGCT+TGG | 0.486618 | 1.1:-68061683 | None:intergenic |
| ATGTTACAATAGGATTTGAC+AGG | 0.488820 | 1.1:+68059159 | MS.gene005906:intron |
| GGTTTGACGACATGGTTGCT+GGG | 0.490443 | 1.1:+68058888 | MS.gene005906:CDS |
| AAACAAAGGAGGAAGCTTTG+TGG | 0.493157 | 1.1:-68058127 | None:intergenic |
| GGAAAGAGAGGAGATGGGGT+GGG | 0.495047 | 1.1:-68058101 | None:intergenic |
| TATTACATGCTAGGTGGGAA+AGG | 0.499703 | 1.1:+68058923 | MS.gene005906:CDS |
| TACCTTTAGTATCTTCCCGA+TGG | 0.504784 | 1.1:-68060500 | None:intergenic |
| AGATAAACCCTGAGAAGGCT+AGG | 0.504802 | 1.1:+68059346 | MS.gene005906:intron |
| TACATGCTAGGTGGGAAAGG+AGG | 0.505952 | 1.1:+68058926 | MS.gene005906:CDS |
| GGATACACCTCCTCCTGGAC+TGG | 0.509204 | 1.1:+68060167 | MS.gene005906:CDS |
| ATTTCTTGGATGCATCCATC+GGG | 0.509752 | 1.1:+68060485 | MS.gene005906:CDS |
| TGCTTGGATCATCGATAAGC+TGG | 0.509888 | 1.1:-68061667 | None:intergenic |
| CTTGTTGATGTTGAGATAAG+AGG | 0.512017 | 1.1:+68061693 | MS.gene005906:CDS |
| CAAAGATTTCATGGATGGCA+TGG | 0.513368 | 1.1:+68059416 | MS.gene005906:CDS |
| GATTTCTTGGATGCATCCAT+CGG | 0.513943 | 1.1:+68060484 | MS.gene005906:CDS |
| CTAGGTGGGAAAGGAGGGGT+AGG | 0.517623 | 1.1:+68058932 | MS.gene005906:CDS |
| AACACTTTCTTTCTTCAATG+AGG | 0.522825 | 1.1:-68061338 | None:intergenic |
| AGGAAAGAGAGGAGATGGGG+TGG | 0.527456 | 1.1:-68058102 | None:intergenic |
| TATATCGGGGTTTGACGACA+TGG | 0.529417 | 1.1:+68058880 | MS.gene005906:CDS |
| GGAGCATTGGTACAGGTGGA+TGG | 0.530531 | 1.1:+68059183 | MS.gene005906:CDS |
| GAGAGGAAGTATTACATGCT+AGG | 0.533273 | 1.1:+68058914 | MS.gene005906:CDS |
| TGACAAATTGGAGAAGCTTA+GGG | 0.538635 | 1.1:+68060890 | MS.gene005906:CDS |
| GAAAGGAAAGAGAGGAGATG+GGG | 0.544252 | 1.1:-68058105 | None:intergenic |
| TCAGTGGAAACGACGAGAGT+CGG | 0.546948 | 1.1:-68059007 | None:intergenic |
| TCACCCAGAAATTTGAGAGC+AGG | 0.551277 | 1.1:-68061720 | None:intergenic |
| AAAACCTTGAAAAGACTTGG+TGG | 0.552040 | 1.1:-68058174 | None:intergenic |
| CAAAGAATGCGCAGGATCAG+TGG | 0.552612 | 1.1:-68059023 | None:intergenic |
| GCTTTGTGGAAAGGAAAGAG+AGG | 0.556625 | 1.1:-68058113 | None:intergenic |
| GGAAGTATTACATGCTAGGT+GGG | 0.558483 | 1.1:+68058918 | MS.gene005906:CDS |
| CTTACCTCAAGAGCGAAAAG+TGG | 0.566351 | 1.1:-68059216 | None:intergenic |
| TTACTGGATACACCTCCTCC+TGG | 0.568600 | 1.1:+68060162 | MS.gene005906:CDS |
| AAGGAGGAAGCTTTGTGGAA+AGG | 0.573130 | 1.1:-68058122 | None:intergenic |
| TGAAGCTATTGCGATTTCCA+AGG | 0.574785 | 1.1:+68060191 | MS.gene005906:CDS |
| ATCCATCGGGAAGATACTAA+AGG | 0.577762 | 1.1:+68060498 | MS.gene005906:CDS |
| GGAGTCAAAGATTTCATGGA+TGG | 0.578877 | 1.1:+68059411 | MS.gene005906:CDS |
| AATCTTCCCTAGCCTTCTCA+GGG | 0.579005 | 1.1:-68059353 | None:intergenic |
| GCAATAGCTTCATCCAGTCC+AGG | 0.580425 | 1.1:-68060180 | None:intergenic |
| TCTGGGAATGATAGTAGACC+AGG | 0.582527 | 1.1:+68059440 | MS.gene005906:CDS |
| AAACCTTGAAAAGACTTGGT+GGG | 0.584998 | 1.1:-68058173 | None:intergenic |
| TTGACAATGAGTCTCTTCAC+AGG | 0.590338 | 1.1:-68061361 | None:intergenic |
| AATTGGAGAAGCTTAGGGAG+AGG | 0.591225 | 1.1:+68060895 | MS.gene005906:CDS |
| TAGGTGGGAAAGGAGGGGTA+GGG | 0.594339 | 1.1:+68058933 | MS.gene005906:CDS |
| AAAGATTTCATGGATGGCAT+GGG | 0.595809 | 1.1:+68059417 | MS.gene005906:CDS |
| GCTTCATCCAGTCCAGGAGG+AGG | 0.599686 | 1.1:-68060174 | None:intergenic |
| GAGTCACTCAAAGAATGCGC+AGG | 0.599795 | 1.1:-68059031 | None:intergenic |
| GATAAACCCTGAGAAGGCTA+GGG | 0.599812 | 1.1:+68059347 | MS.gene005906:intron |
| ACAAATTCAATGGCCATCAA+GGG | 0.602060 | 1.1:+68058062 | None:intergenic |
| ATTACAGATAAACCCTGAGA+AGG | 0.606217 | 1.1:+68059341 | MS.gene005906:intron |
| TGTTATTGTTACAATCCCCA+CGG | 0.608154 | 1.1:+68060965 | MS.gene005906:CDS |
| CATGCTAGGTGGGAAAGGAG+GGG | 0.610256 | 1.1:+68058928 | MS.gene005906:CDS |
| CTTATCTCAACATCAACAAG+TGG | 0.612453 | 1.1:-68061690 | None:intergenic |
| TTACAATAGGATTTGACAGG+GGG | 0.616196 | 1.1:+68059162 | MS.gene005906:intron |
| TTGCAATCAGATGCAGATGG+TGG | 0.623124 | 1.1:-68061394 | None:intergenic |
| AGGAAGTATTACATGCTAGG+TGG | 0.625352 | 1.1:+68058917 | MS.gene005906:CDS |
| TGGAGAGTTCTGGATCACTC+TGG | 0.629143 | 1.1:-68061647 | None:intergenic |
| TTTGTTGTCAGTGAGATCAG+TGG | 0.633537 | 1.1:+68058841 | MS.gene005906:intron |
| GAACACAGATTTAATTGCAG+AGG | 0.636304 | 1.1:-68060757 | None:intergenic |
| TGCATCCAAGAAATCAGGCA+AGG | 0.637215 | 1.1:-68060476 | None:intergenic |
| GGAAGCCCGCAAAGAAACAA+AGG | 0.642749 | 1.1:-68058141 | None:intergenic |
| ACATGGTTGCTGGGACTGAG+AGG | 0.644373 | 1.1:+68058897 | MS.gene005906:CDS |
| AAGTTAGGAGAGCTAAAACT+GGG | 0.652686 | 1.1:+68060135 | MS.gene005906:intron |
| TGTTACAATAGGATTTGACA+GGG | 0.655862 | 1.1:+68059160 | MS.gene005906:intron |
| GATGCAGCTAAACAAAATGG+TGG | 0.657414 | 1.1:+68059381 | MS.gene005906:CDS |
| AGCCCGCAAAGAAACAAAGG+AGG | 0.669650 | 1.1:-68058138 | None:intergenic |
| AACCCCGATATAGATTCTGT+AGG | 0.670064 | 1.1:-68058869 | None:intergenic |
| CTCCTACAGAATCTATATCG+GGG | 0.677970 | 1.1:+68058867 | MS.gene005906:CDS |
| AATCTTACAGCATCTTGACG+AGG | 0.694562 | 1.1:-68060792 | None:intergenic |
| AACTTGCAATCAGATGCAGA+TGG | 0.700821 | 1.1:-68061397 | None:intergenic |
| GTTACAATAGGATTTGACAG+GGG | 0.702945 | 1.1:+68059161 | MS.gene005906:intron |
| ATAGCTTCATCCAGTCCAGG+AGG | 0.738020 | 1.1:-68060177 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTTTTTTTTTAATTAAAT+GGG | + | chr1.1:68058425-68058444 | MS.gene005906:intron | 0.0% |
| !!! | TTTTTTTTTTTTTAATTAAA+TGG | + | chr1.1:68058424-68058443 | MS.gene005906:intron | 0.0% |
| !! | CAATAACTAAATTAATTAAA+TGG | - | chr1.1:68058317-68058336 | None:intergenic | 10.0% |
| !!! | TAAAAAAAAAAAGTATTAGA+GGG | - | chr1.1:68060645-68060664 | None:intergenic | 10.0% |
| !!! | TTTAGATAATTTGTTTAATT+TGG | + | chr1.1:68058466-68058485 | MS.gene005906:intron | 10.0% |
| !! | ATTAATTTAGTTATTGCAAA+TGG | + | chr1.1:68058321-68058340 | MS.gene005906:intron | 15.0% |
| !! | CATAAAATTTAAATAGCTTA+AGG | - | chr1.1:68060002-68060021 | None:intergenic | 15.0% |
| !! | TTAATTTAGTTATTGCAAAT+GGG | + | chr1.1:68058322-68058341 | MS.gene005906:intron | 15.0% |
| !!! | CAGAAAACTTATAATTTTAA+AGG | - | chr1.1:68059544-68059563 | None:intergenic | 15.0% |
| !!! | CTTGTTATTAAATTGAATAT+TGG | + | chr1.1:68058255-68058274 | MS.gene005906:intron | 15.0% |
| !!! | GATTTTTCTTATCATATTTT+GGG | + | chr1.1:68058381-68058400 | MS.gene005906:intron | 15.0% |
| !!! | GTAAAAAAAAAAAGTATTAG+AGG | - | chr1.1:68060646-68060665 | None:intergenic | 15.0% |
| !!! | GTTATTCAATTATTATTTCT+AGG | - | chr1.1:68060996-68061015 | None:intergenic | 15.0% |
| !!! | TGATTTTTCTTATCATATTT+TGG | + | chr1.1:68058380-68058399 | MS.gene005906:intron | 15.0% |
| !!! | TTTTTTTTAATTAAATGGGT+AGG | + | chr1.1:68058429-68058448 | MS.gene005906:intron | 15.0% |
| !! | ATAAAAGAAAAAACATTCAC+TGG | - | chr1.1:68058287-68058306 | None:intergenic | 20.0% |
| !! | TAAAAGAAAAAACATTCACT+GGG | - | chr1.1:68058286-68058305 | None:intergenic | 20.0% |
| !! | TGGTTTAATTCTATTTCATA+TGG | + | chr1.1:68058505-68058524 | MS.gene005906:intron | 20.0% |
| !! | TTAATTATCATATTTACCAC+CGG | + | chr1.1:68059969-68059988 | MS.gene005906:intron | 20.0% |
| !!! | AGTTTTTCATATGTTACAAT+AGG | + | chr1.1:68059149-68059168 | MS.gene005906:intron | 20.0% |
| !!! | ATATTTCACATCTTTGTTTT+TGG | + | chr1.1:68060394-68060413 | MS.gene005906:intron | 20.0% |
| !!! | TTAGCTTTAACATGAATTTA+TGG | - | chr1.1:68059925-68059944 | None:intergenic | 20.0% |
| !!! | TTTAATTTGGAGCATAATTT+AGG | + | chr1.1:68058479-68058498 | MS.gene005906:intron | 20.0% |
| ! | AAAAAAACCTTGAAAAGACT+TGG | - | chr1.1:68058180-68058199 | None:intergenic | 25.0% |
| ! | AAACTTCATATTCATTGTGT+TGG | + | chr1.1:68061238-68061257 | MS.gene005906:intron | 25.0% |
| ! | AAAGAAAGAGATATCTAAGA+GGG | + | chr1.1:68058346-68058365 | MS.gene005906:intron | 25.0% |
| ! | AACTATATACGTACCATTTA+AGG | + | chr1.1:68059294-68059313 | MS.gene005906:intron | 25.0% |
| ! | AACTTCATATTCATTGTGTT+GGG | + | chr1.1:68061239-68061258 | MS.gene005906:intron | 25.0% |
| ! | AATTTAATGTAACCACTGTT+TGG | + | chr1.1:68058586-68058605 | MS.gene005906:intron | 25.0% |
| ! | ACATATCATTCACAAATGAT+AGG | + | chr1.1:68059624-68059643 | MS.gene005906:intron | 25.0% |
| ! | ATTCAAGAAATTGTATAACC+TGG | - | chr1.1:68060301-68060320 | None:intergenic | 25.0% |
| ! | ATTTAATGTAACCACTGTTT+GGG | + | chr1.1:68058587-68058606 | MS.gene005906:intron | 25.0% |
| ! | ATTTCACTCTTCAAAACTTA+GGG | - | chr1.1:68061577-68061596 | None:intergenic | 25.0% |
| ! | CACTCGAATTATATTTGATA+CGG | + | chr1.1:68060340-68060359 | MS.gene005906:CDS | 25.0% |
| ! | GATGTGAAATATTTAACTAC+TGG | - | chr1.1:68060386-68060405 | None:intergenic | 25.0% |
| ! | GCTGTTAAATTTGCAAATAA+TGG | + | chr1.1:68058980-68058999 | MS.gene005906:CDS | 25.0% |
| ! | TAAAGAAAGAGATATCTAAG+AGG | + | chr1.1:68058345-68058364 | MS.gene005906:intron | 25.0% |
| ! | TAACATTTGTCATATCTTGA+TGG | + | chr1.1:68060860-68060879 | MS.gene005906:intron | 25.0% |
| !! | TTCTTTTATAGTTAAGCAAC+TGG | + | chr1.1:68059576-68059595 | MS.gene005906:intron | 25.0% |
| !! | TTTCTGGTATAAATCCAAAT+GGG | + | chr1.1:68061094-68061113 | MS.gene005906:intron | 25.0% |
| !! | TTTTAAGCTGTGAATTTTCA+AGG | + | chr1.1:68059509-68059528 | MS.gene005906:intron | 25.0% |
| !!! | AAAAAAAAGTATTAGAGGGT+AGG | - | chr1.1:68060641-68060660 | None:intergenic | 25.0% |
| !!! | AAAAAAAGTATTAGAGGGTA+GGG | - | chr1.1:68060640-68060659 | None:intergenic | 25.0% |
| !!! | ATTTCTGGTATAAATCCAAA+TGG | + | chr1.1:68061093-68061112 | MS.gene005906:intron | 25.0% |
| !!! | CATGCATTTTTTATGCTTTA+TGG | + | chr1.1:68060214-68060233 | MS.gene005906:intron | 25.0% |
| AAATATGTCTTTATTCCCCT+AGG | + | chr1.1:68061282-68061301 | MS.gene005906:intron | 30.0% | |
| AACACTTTCTTTCTTCAATG+AGG | - | chr1.1:68061341-68061360 | None:intergenic | 30.0% | |
| AAGAAAGAGATATCTAAGAG+GGG | + | chr1.1:68058347-68058366 | MS.gene005906:intron | 30.0% | |
| ATAAGCAGTGTAACCTTAAA+TGG | - | chr1.1:68059310-68059329 | None:intergenic | 30.0% | |
| ATGTTACAATAGGATTTGAC+AGG | + | chr1.1:68059159-68059178 | MS.gene005906:intron | 30.0% | |
| ATTCTTTGACTGCAAAAGTT+AGG | + | chr1.1:68060120-68060139 | MS.gene005906:intron | 30.0% | |
| ATTTAAGGACTTCAGATTTC+TGG | + | chr1.1:68061078-68061097 | MS.gene005906:intron | 30.0% | |
| CTTCTACTAAGTGAACAATA+AGG | + | chr1.1:68060583-68060602 | MS.gene005906:intron | 30.0% | |
| GAAACAACAAATCTTAGAGA+AGG | - | chr1.1:68060100-68060119 | None:intergenic | 30.0% | |
| GATTTCACTCTTCAAAACTT+AGG | - | chr1.1:68061578-68061597 | None:intergenic | 30.0% | |
| TCAATGCTACATAAGCTAAT+GGG | + | chr1.1:68058654-68058673 | MS.gene005906:intron | 30.0% | |
| TCTCACTGACAACAAAAATA+AGG | - | chr1.1:68058837-68058856 | None:intergenic | 30.0% | |
| TCTGCAATTAAATCTGTGTT+CGG | + | chr1.1:68060759-68060778 | MS.gene005906:CDS | 30.0% | |
| TGAAGTTACATATCATTCAG+TGG | - | chr1.1:68061205-68061224 | None:intergenic | 30.0% | |
| TGTTACAATAGGATTTGACA+GGG | + | chr1.1:68059160-68059179 | MS.gene005906:intron | 30.0% | |
| TTTGCAGAATCGATATAGTT+AGG | + | chr1.1:68059741-68059760 | MS.gene005906:intron | 30.0% | |
| ! | AAATCTGAAGTCCTTAAATC+AGG | - | chr1.1:68061077-68061096 | None:intergenic | 30.0% |
| ! | ACTTCAAATTGAAGGTGTAT+TGG | - | chr1.1:68058633-68058652 | None:intergenic | 30.0% |
| ! | AGTTATCTTCTGGTATTTTC+TGG | - | chr1.1:68060055-68060074 | None:intergenic | 30.0% |
| ! | GTTTTGTGCAATGAAAAGAA+AGG | + | chr1.1:68061417-68061436 | MS.gene005906:CDS | 30.0% |
| !! | TTTCTTATCATATTTTGGGC+TGG | + | chr1.1:68058385-68058404 | MS.gene005906:intron | 30.0% |
| AAAACCTTGAAAAGACTTGG+TGG | - | chr1.1:68058177-68058196 | None:intergenic | 35.0% | |
| AAAGATTTCATGGATGGCAT+GGG | + | chr1.1:68059417-68059436 | MS.gene005906:CDS | 35.0% | |
| AAAGTTAGGAGAGCTAAAAC+TGG | + | chr1.1:68060134-68060153 | MS.gene005906:intron | 35.0% | |
| AACTGTTAGTAGAGCGAAAA+CGG | - | chr1.1:68060266-68060285 | None:intergenic | 35.0% | |
| AAGCAGAAACAGTTATCTTC+TGG | - | chr1.1:68060065-68060084 | None:intergenic | 35.0% | |
| AAGTTAGGAGAGCTAAAACT+GGG | + | chr1.1:68060135-68060154 | MS.gene005906:intron | 35.0% | |
| ACAGTTAAAATCTTCTTGCC+AGG | + | chr1.1:68060280-68060299 | MS.gene005906:intron | 35.0% | |
| ACATCTCAATAAGCTTTACC+TGG | - | chr1.1:68059461-68059480 | None:intergenic | 35.0% | |
| ACTGGCATTATACTTACAGT+AGG | - | chr1.1:68060368-68060387 | None:intergenic | 35.0% | |
| AGCATAAAAAATGCATGCCT+TGG | - | chr1.1:68060211-68060230 | None:intergenic | 35.0% | |
| ATACAGGATCACTCAAAGAA+TGG | - | chr1.1:68060683-68060702 | None:intergenic | 35.0% | |
| ATATTCATTGTGTTGGGAAG+AGG | + | chr1.1:68061245-68061264 | MS.gene005906:intron | 35.0% | |
| ATTACAGATAAACCCTGAGA+AGG | + | chr1.1:68059341-68059360 | MS.gene005906:intron | 35.0% | |
| ATTCTTTGAGTGATCCTGTA+TGG | + | chr1.1:68060682-68060701 | MS.gene005906:intron | 35.0% | |
| CAATTTCACCTAGTGAGAAA+AGG | + | chr1.1:68061161-68061180 | MS.gene005906:intron | 35.0% | |
| CACAGCTTAAAATATACCCT+TGG | - | chr1.1:68059501-68059520 | None:intergenic | 35.0% | |
| CATTCAGTGGTAAACTACAA+TGG | - | chr1.1:68061192-68061211 | None:intergenic | 35.0% | |
| CCTTGGATGAAATACATAAC+CGG | - | chr1.1:68059484-68059503 | None:intergenic | 35.0% | |
| CGGTTATGTATTTCATCCAA+GGG | + | chr1.1:68059482-68059501 | MS.gene005906:intron | 35.0% | |
| CTGCAATTAAATCTGTGTTC+GGG | + | chr1.1:68060760-68060779 | MS.gene005906:CDS | 35.0% | |
| CTTATCTCAACATCAACAAG+TGG | - | chr1.1:68061693-68061712 | None:intergenic | 35.0% | |
| CTTGTTGATGTTGAGATAAG+AGG | + | chr1.1:68061693-68061712 | MS.gene005906:CDS | 35.0% | |
| GAACACAGATTTAATTGCAG+AGG | - | chr1.1:68060760-68060779 | None:intergenic | 35.0% | |
| GCTGTAAGATTCATATTGCT+GGG | + | chr1.1:68060804-68060823 | MS.gene005906:intron | 35.0% | |
| GTAAAGCTTATTGAGATGTC+CGG | + | chr1.1:68059462-68059481 | MS.gene005906:intron | 35.0% | |
| GTCAATGCTACATAAGCTAA+TGG | + | chr1.1:68058653-68058672 | MS.gene005906:intron | 35.0% | |
| GTTACAATAGGATTTGACAG+GGG | + | chr1.1:68059161-68059180 | MS.gene005906:intron | 35.0% | |
| GTTAGGATAACATCTGTGTT+TGG | + | chr1.1:68059758-68059777 | MS.gene005906:intron | 35.0% | |
| TACTGGAGTCAAAGATTTCA+TGG | + | chr1.1:68059407-68059426 | MS.gene005906:CDS | 35.0% | |
| TGACAAATTGGAGAAGCTTA+GGG | + | chr1.1:68060890-68060909 | MS.gene005906:CDS | 35.0% | |
| TGACATTTCGTGATGTGTTA+GGG | + | chr1.1:68058711-68058730 | MS.gene005906:intron | 35.0% | |
| TGCTCCTACAGAATCTATAT+CGG | + | chr1.1:68058865-68058884 | MS.gene005906:CDS | 35.0% | |
| TGCTGTAAGATTCATATTGC+TGG | + | chr1.1:68060803-68060822 | MS.gene005906:intron | 35.0% | |
| TGGTATAAATCCAAATGGGT+GGG | + | chr1.1:68061098-68061117 | MS.gene005906:intron | 35.0% | |
| TGTTATTGTTACAATCCCCA+CGG | + | chr1.1:68060965-68060984 | MS.gene005906:CDS | 35.0% | |
| TTACAATAGGATTTGACAGG+GGG | + | chr1.1:68059162-68059181 | MS.gene005906:intron | 35.0% | |
| TTCATATGGATGATCGATGA+TGG | + | chr1.1:68058519-68058538 | MS.gene005906:intron | 35.0% | |
| TTGACATTTCGTGATGTGTT+AGG | + | chr1.1:68058710-68058729 | MS.gene005906:intron | 35.0% | |
| TTGGAGCATAATTTAGGTGA+TGG | + | chr1.1:68058485-68058504 | MS.gene005906:intron | 35.0% | |
| ! | AAACAAAATGGTGGAACTAC+TGG | + | chr1.1:68059390-68059409 | MS.gene005906:CDS | 35.0% |
| ! | AAACCTTGAAAAGACTTGGT+GGG | - | chr1.1:68058176-68058195 | None:intergenic | 35.0% |
| ! | AATTTCTGGGTGACATTATC+TGG | + | chr1.1:68061730-68061749 | MS.gene005906:CDS | 35.0% |
| ! | AGGTTACACTGCTTATGTTT+TGG | + | chr1.1:68059314-68059333 | MS.gene005906:intron | 35.0% |
| ! | ATGTGTTAGGGTTTTCTTTG+AGG | + | chr1.1:68058723-68058742 | MS.gene005906:intron | 35.0% |
| ! | ATTTACCCATTTTCCTGAAC+AGG | + | chr1.1:68060432-68060451 | MS.gene005906:intron | 35.0% |
| ! | CTTTTCTCACTAGGTGAAAT+TGG | - | chr1.1:68061163-68061182 | None:intergenic | 35.0% |
| ! | GCATTGACACTTCAAATTGA+AGG | - | chr1.1:68058641-68058660 | None:intergenic | 35.0% |
| ! | TTGTCATATCTTGATGGTAC+AGG | + | chr1.1:68060866-68060885 | MS.gene005906:intron | 35.0% |
| ! | TTTACCCATTTTCCTGAACA+GGG | + | chr1.1:68060433-68060452 | MS.gene005906:intron | 35.0% |
| !! | ATTATTTCTAGGTCATACCG+TGG | - | chr1.1:68060985-68061004 | None:intergenic | 35.0% |
| !! | TACTGCTAGCTAACTTTTTC+AGG | + | chr1.1:68061599-68061618 | MS.gene005906:intron | 35.0% |
| !! | TTATTTCTAGGTCATACCGT+GGG | - | chr1.1:68060984-68061003 | None:intergenic | 35.0% |
| AAACAAAGGAGGAAGCTTTG+TGG | - | chr1.1:68058130-68058149 | None:intergenic | 40.0% | |
| AACCCCGATATAGATTCTGT+AGG | - | chr1.1:68058872-68058891 | None:intergenic | 40.0% | |
| AACTTGCAATCAGATGCAGA+TGG | - | chr1.1:68061400-68061419 | None:intergenic | 40.0% | |
| AATCTTACAGCATCTTGACG+AGG | - | chr1.1:68060795-68060814 | None:intergenic | 40.0% | |
| AGAGCGAAAAGTGGATAATC+AGG | - | chr1.1:68059210-68059229 | None:intergenic | 40.0% | |
| ATCCATCGGGAAGATACTAA+AGG | + | chr1.1:68060498-68060517 | MS.gene005906:CDS | 40.0% | |
| ATGACCCTGTTCAGGAAAAT+GGG | - | chr1.1:68060440-68060459 | None:intergenic | 40.0% | |
| ATGGATGCATCCAAGAAATC+AGG | - | chr1.1:68060484-68060503 | None:intergenic | 40.0% | |
| ATTGGTATCAACAGCCATAC+AGG | - | chr1.1:68060699-68060718 | None:intergenic | 40.0% | |
| ATTGTCCTTGCCTGATTTCT+TGG | + | chr1.1:68060471-68060490 | MS.gene005906:CDS | 40.0% | |
| ATTTCTTGGATGCATCCATC+GGG | + | chr1.1:68060485-68060504 | MS.gene005906:CDS | 40.0% | |
| CAAAGATTTCATGGATGGCA+TGG | + | chr1.1:68059416-68059435 | MS.gene005906:CDS | 40.0% | |
| CCGGTTATGTATTTCATCCA+AGG | + | chr1.1:68059481-68059500 | MS.gene005906:intron | 40.0% | |
| CGAGATGCAGCTAAACAAAA+TGG | + | chr1.1:68059378-68059397 | MS.gene005906:CDS | 40.0% | |
| CTCCTACAGAATCTATATCG+GGG | + | chr1.1:68058867-68058886 | MS.gene005906:CDS | 40.0% | |
| CTGACAAATTGGAGAAGCTT+AGG | + | chr1.1:68060889-68060908 | MS.gene005906:CDS | 40.0% | |
| CTGGTATAAATCCAAATGGG+TGG | + | chr1.1:68061097-68061116 | MS.gene005906:intron | 40.0% | |
| CTTAGCTGCAGCAGAATAAT+TGG | - | chr1.1:68060717-68060736 | None:intergenic | 40.0% | |
| GATGCAGCTAAACAAAATGG+TGG | + | chr1.1:68059381-68059400 | MS.gene005906:CDS | 40.0% | |
| GATTTCTTGGATGCATCCAT+CGG | + | chr1.1:68060484-68060503 | MS.gene005906:CDS | 40.0% | |
| GCTCCTACAGAATCTATATC+GGG | + | chr1.1:68058866-68058885 | MS.gene005906:CDS | 40.0% | |
| GGAGTCAAAGATTTCATGGA+TGG | + | chr1.1:68059411-68059430 | MS.gene005906:CDS | 40.0% | |
| GTTCCTGCTCTCAAATTTCT+GGG | + | chr1.1:68061717-68061736 | MS.gene005906:CDS | 40.0% | |
| TAAGCAACTGGCCATCATAT+AGG | + | chr1.1:68059588-68059607 | MS.gene005906:intron | 40.0% | |
| TACCTTTAGTATCTTCCCGA+TGG | - | chr1.1:68060503-68060522 | None:intergenic | 40.0% | |
| TATGACCCTGTTCAGGAAAA+TGG | - | chr1.1:68060441-68060460 | None:intergenic | 40.0% | |
| TATTACATGCTAGGTGGGAA+AGG | + | chr1.1:68058923-68058942 | MS.gene005906:CDS | 40.0% | |
| TCATTAACTGCCATCACCTA+GGG | - | chr1.1:68061301-68061320 | None:intergenic | 40.0% | |
| TGAAGCTATTGCGATTTCCA+AGG | + | chr1.1:68060191-68060210 | MS.gene005906:CDS | 40.0% | |
| TGAAGTCCTTAAATCAGGCT+TGG | - | chr1.1:68061072-68061091 | None:intergenic | 40.0% | |
| TGCAGCTCTGTAGCATAAAA+GGG | + | chr1.1:68059708-68059727 | MS.gene005906:intron | 40.0% | |
| TGTTCCTGCTCTCAAATTTC+TGG | + | chr1.1:68061716-68061735 | MS.gene005906:CDS | 40.0% | |
| TTGACAATGAGTCTCTTCAC+AGG | - | chr1.1:68061364-68061383 | None:intergenic | 40.0% | |
| ! | CTTCCTCCTTTGTTTCTTTG+CGG | + | chr1.1:68058135-68058154 | MS.gene005906:CDS | 40.0% |
| ! | TGGAAAAGCCTTTTCTCACT+AGG | - | chr1.1:68061172-68061191 | None:intergenic | 40.0% |
| ! | TTCCTCCTTTGTTTCTTTGC+GGG | + | chr1.1:68058136-68058155 | MS.gene005906:CDS | 40.0% |
| ! | TTTGAGTGACTCTTTTGCTC+AGG | + | chr1.1:68059042-68059061 | MS.gene005906:CDS | 40.0% |
| ! | TTTGTTGTCAGTGAGATCAG+TGG | + | chr1.1:68058841-68058860 | MS.gene005906:intron | 40.0% |
| !! | AGGAAGTATTACATGCTAGG+TGG | + | chr1.1:68058917-68058936 | MS.gene005906:CDS | 40.0% |
| !! | GAGAGGAAGTATTACATGCT+AGG | + | chr1.1:68058914-68058933 | MS.gene005906:CDS | 40.0% |
| !! | GGAAGTATTACATGCTAGGT+GGG | + | chr1.1:68058918-68058937 | MS.gene005906:CDS | 40.0% |
| !! | TATTTCTAGGTCATACCGTG+GGG | - | chr1.1:68060983-68061002 | None:intergenic | 40.0% |
| !! | TGTCAGAAAGTGCTATGCTT+TGG | + | chr1.1:68058752-68058771 | MS.gene005906:intron | 40.0% |
| !! | TTATCCACTTTTCGCTCTTG+AGG | + | chr1.1:68059212-68059231 | MS.gene005906:CDS | 40.0% |
| !!! | GTTAGGGTTTTCTTTGAGGT+AGG | + | chr1.1:68058727-68058746 | MS.gene005906:intron | 40.0% |
| AATAGCTTAAGGTGTGCTGC+CGG | - | chr1.1:68059991-68060010 | None:intergenic | 45.0% | |
| AATTGGAGAAGCTTAGGGAG+AGG | + | chr1.1:68060895-68060914 | MS.gene005906:CDS | 45.0% | |
| AGATAAACCCTGAGAAGGCT+AGG | + | chr1.1:68059346-68059365 | MS.gene005906:intron | 45.0% | |
| ATCGATAAGCTGGAGAGTTC+TGG | - | chr1.1:68061660-68061679 | None:intergenic | 45.0% | |
| ATTCTTTCAATCCAGCAGCG+GGG | - | chr1.1:68059848-68059867 | None:intergenic | 45.0% | |
| CAACATCAACAAGTGGTGCT+TGG | - | chr1.1:68061686-68061705 | None:intergenic | 45.0% | |
| CAGTGAAAAACCCACCCATT+TGG | - | chr1.1:68061111-68061130 | None:intergenic | 45.0% | |
| CATTAACTGCCATCACCTAG+GGG | - | chr1.1:68061300-68061319 | None:intergenic | 45.0% | |
| CATTCTTTCAATCCAGCAGC+GGG | - | chr1.1:68059849-68059868 | None:intergenic | 45.0% | |
| CCAATACAACACCCAAACAG+TGG | - | chr1.1:68058601-68058620 | None:intergenic | 45.0% | |
| CGTAATGTATGACCCTGTTC+AGG | - | chr1.1:68060448-68060467 | None:intergenic | 45.0% | |
| CTCATTAACTGCCATCACCT+AGG | - | chr1.1:68061302-68061321 | None:intergenic | 45.0% | |
| CTTACCTCAAGAGCGAAAAG+TGG | - | chr1.1:68059219-68059238 | None:intergenic | 45.0% | |
| GAAAGGAAAGAGAGGAGATG+GGG | - | chr1.1:68058108-68058127 | None:intergenic | 45.0% | |
| GATAAACCCTGAGAAGGCTA+GGG | + | chr1.1:68059347-68059366 | MS.gene005906:intron | 45.0% | |
| GATGGTACAGGCTGACAAAT+TGG | + | chr1.1:68060878-68060897 | MS.gene005906:intron | 45.0% | |
| GCAGCTCTGTAGCATAAAAG+GGG | + | chr1.1:68059709-68059728 | MS.gene005906:intron | 45.0% | |
| GCATTCTTTCAATCCAGCAG+CGG | - | chr1.1:68059850-68059869 | None:intergenic | 45.0% | |
| GCTAAAACTGGGAGAGTTAC+TGG | + | chr1.1:68060146-68060165 | MS.gene005906:CDS | 45.0% | |
| GCTTTGTGGAAAGGAAAGAG+AGG | - | chr1.1:68058116-68058135 | None:intergenic | 45.0% | |
| GGAAAGGAAAGAGAGGAGAT+GGG | - | chr1.1:68058109-68058128 | None:intergenic | 45.0% | |
| GTATGTGCCTGCCTATATGA+TGG | - | chr1.1:68059602-68059621 | None:intergenic | 45.0% | |
| GTCTTTATTCCCCTAGGTGA+TGG | + | chr1.1:68061288-68061307 | MS.gene005906:intron | 45.0% | |
| GTGCAGCTCTGTAGCATAAA+AGG | + | chr1.1:68059707-68059726 | MS.gene005906:intron | 45.0% | |
| TAAATCAGGCTTGGCAGTGA+TGG | - | chr1.1:68061063-68061082 | None:intergenic | 45.0% | |
| TATATCGGGGTTTGACGACA+TGG | + | chr1.1:68058880-68058899 | MS.gene005906:CDS | 45.0% | |
| TCACCCAGAAATTTGAGAGC+AGG | - | chr1.1:68061723-68061742 | None:intergenic | 45.0% | |
| TCACTGCCAAGCCTGATTTA+AGG | + | chr1.1:68061063-68061082 | MS.gene005906:intron | 45.0% | |
| TCTGGGAATGATAGTAGACC+AGG | + | chr1.1:68059440-68059459 | MS.gene005906:CDS | 45.0% | |
| TGCATCCAAGAAATCAGGCA+AGG | - | chr1.1:68060479-68060498 | None:intergenic | 45.0% | |
| TGCTTGGATCATCGATAAGC+TGG | - | chr1.1:68061670-68061689 | None:intergenic | 45.0% | |
| TGGAAAGGAAAGAGAGGAGA+TGG | - | chr1.1:68058110-68058129 | None:intergenic | 45.0% | |
| TTGCAATCAGATGCAGATGG+TGG | - | chr1.1:68061397-68061416 | None:intergenic | 45.0% | |
| ! | AAATCTTCCCTAGCCTTCTC+AGG | - | chr1.1:68059357-68059376 | None:intergenic | 45.0% |
| ! | AAGGAGGAAGCTTTGTGGAA+AGG | - | chr1.1:68058125-68058144 | None:intergenic | 45.0% |
| ! | AATCTTCCCTAGCCTTCTCA+GGG | - | chr1.1:68059356-68059375 | None:intergenic | 45.0% |
| ! | CAACCCACCAAGTCTTTTCA+AGG | + | chr1.1:68058170-68058189 | MS.gene005906:CDS | 45.0% |
| ! | CCACTGTTTGGGTGTTGTAT+TGG | + | chr1.1:68058598-68058617 | MS.gene005906:intron | 45.0% |
| ! | CTTCAATGAGGCACTCAATC+TGG | - | chr1.1:68061329-68061348 | None:intergenic | 45.0% |
| ! | GAGCTGACTGATTCAAGTTC+TGG | + | chr1.1:68059100-68059119 | MS.gene005906:intron | 45.0% |
| ! | TTTTCGCTCTTGAGGTAAGC+TGG | + | chr1.1:68059220-68059239 | MS.gene005906:intron | 45.0% |
| !! | AATAACTAAATTAATTAAAT+GGG | - | chr1.1:68058316-68058335 | None:intergenic | 5.0% |
| ACATGCTAGGTGGGAAAGGA+GGG | + | chr1.1:68058927-68058946 | MS.gene005906:CDS | 50.0% | |
| AGCCCGCAAAGAAACAAAGG+AGG | - | chr1.1:68058141-68058160 | None:intergenic | 50.0% | |
| ATAGCTTCATCCAGTCCAGG+AGG | - | chr1.1:68060180-68060199 | None:intergenic | 50.0% | |
| CAAAGAATGCGCAGGATCAG+TGG | - | chr1.1:68059026-68059045 | None:intergenic | 50.0% | |
| CAACTGGCCATCATATAGGC+AGG | + | chr1.1:68059592-68059611 | MS.gene005906:intron | 50.0% | |
| GAGTCACTCAAAGAATGCGC+AGG | - | chr1.1:68059034-68059053 | None:intergenic | 50.0% | |
| GCAATAGCTTCATCCAGTCC+AGG | - | chr1.1:68060183-68060202 | None:intergenic | 50.0% | |
| GGAAGCCCGCAAAGAAACAA+AGG | - | chr1.1:68058144-68058163 | None:intergenic | 50.0% | |
| GGTTTGACGACATGGTTGCT+GGG | + | chr1.1:68058888-68058907 | MS.gene005906:CDS | 50.0% | |
| TACATGCTAGGTGGGAAAGG+AGG | + | chr1.1:68058926-68058945 | MS.gene005906:CDS | 50.0% | |
| TATTGAACAAACCCCGCTGC+TGG | + | chr1.1:68059834-68059853 | MS.gene005906:intron | 50.0% | |
| TCAGTGGAAACGACGAGAGT+CGG | - | chr1.1:68059010-68059029 | None:intergenic | 50.0% | |
| TTACTGGATACACCTCCTCC+TGG | + | chr1.1:68060162-68060181 | MS.gene005906:CDS | 50.0% | |
| TTCATGGATGGCATGGGTCT+GGG | + | chr1.1:68059423-68059442 | MS.gene005906:CDS | 50.0% | |
| TTCCACATGCTTGAGCTGAG+TGG | + | chr1.1:68061466-68061485 | MS.gene005906:intron | 50.0% | |
| TTTCATGGATGGCATGGGTC+TGG | + | chr1.1:68059422-68059441 | MS.gene005906:CDS | 50.0% | |
| ! | TGGATGATCGATGATGGCAC+TGG | + | chr1.1:68058525-68058544 | MS.gene005906:intron | 50.0% |
| !! | AGACTTGGTGGGTTGCTTAG+TGG | - | chr1.1:68058165-68058184 | None:intergenic | 50.0% |
| !! | GAATGAGAGAGCACCCTTGA+TGG | - | chr1.1:68058078-68058097 | None:intergenic | 50.0% |
| !! | TGGAGAGTTCTGGATCACTC+TGG | - | chr1.1:68061650-68061669 | None:intergenic | 50.0% |
| ACATGGTTGCTGGGACTGAG+AGG | + | chr1.1:68058897-68058916 | MS.gene005906:CDS | 55.0% | |
| AGGAAAGAGAGGAGATGGGG+TGG | - | chr1.1:68058105-68058124 | None:intergenic | 55.0% | |
| CACCACTCAGCTCAAGCATG+TGG | - | chr1.1:68061471-68061490 | None:intergenic | 55.0% | |
| CAGTGGAAACGACGAGAGTC+GGG | - | chr1.1:68059009-68059028 | None:intergenic | 55.0% | |
| CATGCTAGGTGGGAAAGGAG+GGG | + | chr1.1:68058928-68058947 | MS.gene005906:CDS | 55.0% | |
| GGAAAGAGAGGAGATGGGGT+GGG | - | chr1.1:68058104-68058123 | None:intergenic | 55.0% | |
| GGGTTTGACGACATGGTTGC+TGG | + | chr1.1:68058887-68058906 | MS.gene005906:CDS | 55.0% | |
| TAGGTGGGAAAGGAGGGGTA+GGG | + | chr1.1:68058933-68058952 | MS.gene005906:CDS | 55.0% | |
| ! | GGATTTGACAGGGGGAGCAT+TGG | + | chr1.1:68059170-68059189 | MS.gene005906:intron | 55.0% |
| !! | GGAGCATTGGTACAGGTGGA+TGG | + | chr1.1:68059183-68059202 | MS.gene005906:CDS | 55.0% |
| AGAGAGGAGATGGGGTGGGA+TGG | - | chr1.1:68058100-68058119 | None:intergenic | 60.0% | |
| AGCTTAAGGTGTGCTGCCGG+TGG | - | chr1.1:68059988-68060007 | None:intergenic | 60.0% | |
| CTAGGTGGGAAAGGAGGGGT+AGG | + | chr1.1:68058932-68058951 | MS.gene005906:CDS | 60.0% | |
| GCTTCATCCAGTCCAGGAGG+AGG | - | chr1.1:68060177-68060196 | None:intergenic | 60.0% | |
| GGATACACCTCCTCCTGGAC+TGG | + | chr1.1:68060167-68060186 | MS.gene005906:CDS | 60.0% | |
| !! | AGGGGGAGCATTGGTACAGG+TGG | + | chr1.1:68059179-68059198 | MS.gene005906:CDS | 60.0% |
| !! | GACAGGGGGAGCATTGGTAC+AGG | + | chr1.1:68059176-68059195 | MS.gene005906:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 68058071 | 68061758 | 68058071 | ID=MS.gene005906 |
| chr1.1 | mRNA | 68058071 | 68061758 | 68058071 | ID=MS.gene005906.t1;Parent=MS.gene005906 |
| chr1.1 | exon | 68058071 | 68058191 | 68058071 | ID=MS.gene005906.t1.exon1;Parent=MS.gene005906.t1 |
| chr1.1 | CDS | 68058071 | 68058191 | 68058071 | ID=cds.MS.gene005906.t1;Parent=MS.gene005906.t1 |
| chr1.1 | exon | 68058852 | 68059063 | 68058852 | ID=MS.gene005906.t1.exon2;Parent=MS.gene005906.t1 |
| chr1.1 | CDS | 68058852 | 68059063 | 68058852 | ID=cds.MS.gene005906.t1;Parent=MS.gene005906.t1 |
| chr1.1 | exon | 68059171 | 68059233 | 68059171 | ID=MS.gene005906.t1.exon3;Parent=MS.gene005906.t1 |
| chr1.1 | CDS | 68059171 | 68059233 | 68059171 | ID=cds.MS.gene005906.t1;Parent=MS.gene005906.t1 |
| chr1.1 | exon | 68059348 | 68059461 | 68059348 | ID=MS.gene005906.t1.exon4;Parent=MS.gene005906.t1 |
| chr1.1 | CDS | 68059348 | 68059461 | 68059348 | ID=cds.MS.gene005906.t1;Parent=MS.gene005906.t1 |
| chr1.1 | exon | 68060138 | 68060212 | 68060138 | ID=MS.gene005906.t1.exon5;Parent=MS.gene005906.t1 |
| chr1.1 | CDS | 68060138 | 68060212 | 68060138 | ID=cds.MS.gene005906.t1;Parent=MS.gene005906.t1 |
| chr1.1 | exon | 68060302 | 68060370 | 68060302 | ID=MS.gene005906.t1.exon6;Parent=MS.gene005906.t1 |
| chr1.1 | CDS | 68060302 | 68060370 | 68060302 | ID=cds.MS.gene005906.t1;Parent=MS.gene005906.t1 |
| chr1.1 | exon | 68060454 | 68060519 | 68060454 | ID=MS.gene005906.t1.exon7;Parent=MS.gene005906.t1 |
| chr1.1 | CDS | 68060454 | 68060519 | 68060454 | ID=cds.MS.gene005906.t1;Parent=MS.gene005906.t1 |
| chr1.1 | exon | 68060732 | 68060806 | 68060732 | ID=MS.gene005906.t1.exon8;Parent=MS.gene005906.t1 |
| chr1.1 | CDS | 68060732 | 68060806 | 68060732 | ID=cds.MS.gene005906.t1;Parent=MS.gene005906.t1 |
| chr1.1 | exon | 68060888 | 68060986 | 68060888 | ID=MS.gene005906.t1.exon9;Parent=MS.gene005906.t1 |
| chr1.1 | CDS | 68060888 | 68060986 | 68060888 | ID=cds.MS.gene005906.t1;Parent=MS.gene005906.t1 |
| chr1.1 | exon | 68061304 | 68061438 | 68061304 | ID=MS.gene005906.t1.exon10;Parent=MS.gene005906.t1 |
| chr1.1 | CDS | 68061304 | 68061438 | 68061304 | ID=cds.MS.gene005906.t1;Parent=MS.gene005906.t1 |
| chr1.1 | exon | 68061621 | 68061758 | 68061621 | ID=MS.gene005906.t1.exon11;Parent=MS.gene005906.t1 |
| chr1.1 | CDS | 68061621 | 68061758 | 68061621 | ID=cds.MS.gene005906.t1;Parent=MS.gene005906.t1 |
| Gene Sequence |
| Protein sequence |
