Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63744.t1 | RHN74940.1 | 90 | 529 | 20 | 5 | 1 | 503 | 1 | 522 | 2.00E-234 | 821.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63744.t1 | A0A396J9V5 | 90.0 | 529 | 20 | 5 | 1 | 503 | 1 | 522 | 1.4e-234 | 821.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene63744 | 0.844442 | 7.54E-59 | -1.69E-46 |
| MS.gene050194 | MS.gene63744 | 0.817679 | 2.91E-52 | -1.69E-46 |
| MS.gene053144 | MS.gene63744 | 0.804788 | 1.83E-49 | -1.69E-46 |
| MS.gene054584 | MS.gene63744 | 0.811559 | 6.59E-51 | -1.69E-46 |
| MS.gene055580 | MS.gene63744 | -0.802895 | 4.52E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene63744 | 0.88012 | 7.13E-70 | -1.69E-46 |
| MS.gene060587 | MS.gene63744 | 0.855882 | 4.68E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63744.t1 | MTR_2g076330 | 88.847 | 529 | 26 | 6 | 1 | 503 | 1 | 522 | 0.0 | 863 |
| MS.gene63744.t1 | MTR_2g076330 | 83.182 | 220 | 30 | 3 | 286 | 504 | 66 | 279 | 5.21e-107 | 329 |
| MS.gene63744.t1 | MTR_2g076330 | 88.588 | 517 | 26 | 6 | 1 | 491 | 1 | 510 | 0.0 | 842 |
| MS.gene63744.t1 | MTR_2g076330 | 83.182 | 220 | 30 | 3 | 286 | 504 | 66 | 279 | 2.59e-107 | 329 |
| MS.gene63744.t1 | MTR_2g076330 | 85.066 | 529 | 25 | 6 | 1 | 503 | 1 | 501 | 0.0 | 818 |
| MS.gene63744.t1 | MTR_2g076330 | 83.182 | 220 | 30 | 3 | 286 | 504 | 45 | 258 | 3.19e-107 | 329 |
| MS.gene63744.t1 | MTR_0022s0280 | 54.023 | 87 | 39 | 1 | 392 | 477 | 186 | 272 | 9.59e-22 | 97.1 |
| MS.gene63744.t1 | MTR_0022s0280 | 47.115 | 104 | 51 | 2 | 170 | 272 | 186 | 286 | 2.45e-20 | 92.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63744.t1 | AT1G78810 | 32.274 | 409 | 211 | 9 | 80 | 486 | 100 | 444 | 1.91e-57 | 198 |
| MS.gene63744.t1 | AT1G78810 | 32.274 | 409 | 211 | 9 | 80 | 486 | 100 | 444 | 1.91e-57 | 198 |
| MS.gene63744.t1 | AT1G78810 | 32.274 | 409 | 211 | 9 | 80 | 486 | 100 | 444 | 2.33e-57 | 198 |
Find 109 sgRNAs with CRISPR-Local
Find 256 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCATTATCATTGGGTTTA+AGG | 0.083244 | 2.1:-23480020 | None:intergenic |
| GAAAATGTGGAAGAGGTTTA+AGG | 0.178260 | 2.1:+23482271 | MS.gene63744:CDS |
| GAAAATGTGGAAGAGGTTTA+AGG | 0.178260 | 2.1:+23483706 | MS.gene63744:CDS |
| CTGCGGTTTCTGATGCTAAA+TGG | 0.188130 | 2.1:+23481874 | MS.gene63744:CDS |
| AACTATTGTGTTGAAGGATT+TGG | 0.247357 | 2.1:+23483847 | MS.gene63744:CDS |
| CTTCGGGAGCTAAGAACTTT+TGG | 0.271254 | 2.1:-23483472 | None:intergenic |
| TCGTTCCCCACAAGAGAATA+AGG | 0.274444 | 2.1:-23483398 | None:intergenic |
| TTCAGTTCCAGTTGAGCTTC+AGG | 0.287848 | 2.1:+23480041 | MS.gene63744:CDS |
| AACAGCTTCGAGGGAGCTTT+TGG | 0.297071 | 2.1:+23482445 | MS.gene63744:CDS |
| ATCATTATCATTGGGTTTAA+GGG | 0.307730 | 2.1:-23480019 | None:intergenic |
| CATCGGGAGCTAAGAACTTT+TGG | 0.328140 | 2.1:-23482031 | None:intergenic |
| AGCAGCTTCAAGGAAGCTTT+TGG | 0.330083 | 2.1:+23483877 | MS.gene63744:CDS |
| GGATTATCTTCAACAACTTC+AGG | 0.332801 | 2.1:+23483341 | MS.gene63744:CDS |
| GCATGATCCTGAAGCTCAAC+TGG | 0.357402 | 2.1:-23480048 | None:intergenic |
| TGGAACTGAATCATTATCAT+TGG | 0.363030 | 2.1:-23480028 | None:intergenic |
| CCAGATGGTGGATTATCTTC+AGG | 0.369017 | 2.1:+23481909 | MS.gene63744:CDS |
| ATTCGCAGCCGCAGGTTTCT+CGG | 0.373500 | 2.1:-23483996 | None:intergenic |
| TTGGGTCTGAGTTCAGAAAA+TGG | 0.375681 | 2.1:+23480698 | MS.gene63744:CDS |
| GTTACCAGCTATTGTGTTGA+AGG | 0.381631 | 2.1:+23482406 | MS.gene63744:CDS |
| TCTTACCCTTATTCTCTTGT+GGG | 0.382075 | 2.1:+23481951 | MS.gene63744:CDS |
| TTCTTACCCTTATTCTCTTG+TGG | 0.385665 | 2.1:+23483391 | MS.gene63744:CDS |
| TGTGGTTTCTGATGCTGAAT+GGG | 0.387056 | 2.1:+23483298 | MS.gene63744:CDS |
| TCTTACCCTTATTCTCTTGT+GGG | 0.389075 | 2.1:+23483392 | MS.gene63744:CDS |
| CTGTGGTTTCTGATGCTGAA+TGG | 0.389876 | 2.1:+23483297 | MS.gene63744:CDS |
| TTCTTACCCTTATTCTCTTG+TGG | 0.394000 | 2.1:+23481950 | MS.gene63744:CDS |
| TGAAGATGAAGAGGAGGATG+AGG | 0.395179 | 2.1:+23482088 | MS.gene63744:CDS |
| ATCAGAAACCGCAGATTCAT+TGG | 0.399717 | 2.1:-23481865 | None:intergenic |
| TGCGGTTTCTGATGCTAAAT+GGG | 0.405883 | 2.1:+23481875 | MS.gene63744:CDS |
| GTTACCAACTATTGTGTTGA+AGG | 0.406576 | 2.1:+23483841 | MS.gene63744:CDS |
| GCTTCAACAAAATGTTACTA+AGG | 0.430146 | 2.1:+23480077 | MS.gene63744:CDS |
| GGAACTGAATCATTATCATT+GGG | 0.438391 | 2.1:-23480027 | None:intergenic |
| GATGAAGGTGAAGATGAGTT+TGG | 0.438508 | 2.1:+23483545 | MS.gene63744:CDS |
| TGCTGAAGATGTTGGCTTGA+GGG | 0.452073 | 2.1:+23483619 | MS.gene63744:CDS |
| TGGATTCCTCAGCAGCTTCA+AGG | 0.456458 | 2.1:+23483867 | MS.gene63744:CDS |
| TTATAGAACAATGCTGATGC+TGG | 0.458175 | 2.1:+23479985 | MS.gene63744:intron |
| TCACTGTCAGAACCAACTTC+GGG | 0.460153 | 2.1:-23483488 | None:intergenic |
| CGTCTGTAAAATTGTTGGTT+GGG | 0.464214 | 2.1:+23483808 | MS.gene63744:CDS |
| AAATCCTTCAACACAATAGT+TGG | 0.467348 | 2.1:-23483845 | None:intergenic |
| TTCGCAGCCGCAGGTTTCTC+GGG | 0.467970 | 2.1:-23483995 | None:intergenic |
| AGAACATGGTTTGGTGTTGA+AGG | 0.472039 | 2.1:-23483372 | None:intergenic |
| ATCACTGTCAGAACCAACTT+CGG | 0.474727 | 2.1:-23483489 | None:intergenic |
| CATGGTTTGGTGTTGAAGGC+CGG | 0.483188 | 2.1:-23483368 | None:intergenic |
| AAATCCTTCAACACAATAGC+TGG | 0.483908 | 2.1:-23482410 | None:intergenic |
| CAAATCGTCTGTAAAGTTGT+TGG | 0.496416 | 2.1:+23482368 | MS.gene63744:CDS |
| TCAACATCATTCGCAGCCGC+AGG | 0.497856 | 2.1:-23484004 | None:intergenic |
| CTGCTGTACTAAGGACGAAA+AGG | 0.499574 | 2.1:+23483756 | MS.gene63744:CDS |
| TCGTCTGTAAAGTTGTTGGA+TGG | 0.501796 | 2.1:+23482372 | MS.gene63744:CDS |
| AAGGATGGTGAGATTCAAGA+TGG | 0.504558 | 2.1:+23480668 | MS.gene63744:intron |
| CAGATGGTGGATTATCTTCA+GGG | 0.506852 | 2.1:+23481910 | MS.gene63744:CDS |
| GTTGAAGATAATCCACCATC+AGG | 0.508474 | 2.1:-23483332 | None:intergenic |
| CCTGAAGATAATCCACCATC+TGG | 0.511429 | 2.1:-23481909 | None:intergenic |
| TTAAGAAGAAAATGTGGAAG+AGG | 0.512472 | 2.1:+23482264 | MS.gene63744:CDS |
| TTAAGAAGAAAATGTGGAAG+AGG | 0.512472 | 2.1:+23483699 | MS.gene63744:CDS |
| TTCAACAACTTCAGGATGGC+CGG | 0.512479 | 2.1:+23483349 | MS.gene63744:CDS |
| CAAGTCGTCTGTAAAATTGT+TGG | 0.514580 | 2.1:+23483803 | MS.gene63744:CDS |
| CGAAAAGGATGCGAGCTCAC+AGG | 0.516813 | 2.1:+23482336 | MS.gene63744:CDS |
| CTACTGTACTAAGGACGAAA+AGG | 0.517368 | 2.1:+23482321 | MS.gene63744:CDS |
| ATTCCTCCTCAACAGCTTCG+AGG | 0.517918 | 2.1:+23482435 | MS.gene63744:CDS |
| ATAAGGGTAAGAACATGGTT+TGG | 0.519095 | 2.1:-23483381 | None:intergenic |
| TCGTCTGTAAAATTGTTGGT+TGG | 0.521628 | 2.1:+23483807 | MS.gene63744:CDS |
| CGTTCCCCACAAGAGAATAA+GGG | 0.522813 | 2.1:-23483397 | None:intergenic |
| AGCATTCAACTGCTGTACTA+AGG | 0.523950 | 2.1:+23483747 | MS.gene63744:CDS |
| TTCCTCCTCAACAGCTTCGA+GGG | 0.527626 | 2.1:+23482436 | MS.gene63744:CDS |
| TTTCGTCCTTAGTACAGTAG+TGG | 0.528949 | 2.1:-23482318 | None:intergenic |
| CGAAAAGGAAGCGAGCTCAC+AGG | 0.538714 | 2.1:+23483771 | MS.gene63744:CDS |
| AAGTTCTTAGCTCCCGAAGT+TGG | 0.540001 | 2.1:+23483476 | MS.gene63744:CDS |
| AGCATTCCACTACTGTACTA+AGG | 0.540686 | 2.1:+23482312 | MS.gene63744:CDS |
| GAAGATGAGGATGAGGATGA+AGG | 0.542015 | 2.1:+23483530 | MS.gene63744:CDS |
| GGATGAAAGTGAAGATGAGT+TGG | 0.543518 | 2.1:+23482109 | MS.gene63744:CDS |
| CTTACCCTTATTCTCTTGTG+GGG | 0.545295 | 2.1:+23481952 | MS.gene63744:CDS |
| AAGCTCCCTCGAAGCTGTTG+AGG | 0.545942 | 2.1:-23482441 | None:intergenic |
| GAAAAGGATGCGAGCTCACA+GGG | 0.552039 | 2.1:+23482337 | MS.gene63744:CDS |
| TTACCCTTATTCTCTTGTGG+GGG | 0.552408 | 2.1:+23481953 | MS.gene63744:CDS |
| TCGCTGTCAGAACCAACATC+GGG | 0.556636 | 2.1:-23482047 | None:intergenic |
| CTTACCCTTATTCTCTTGTG+GGG | 0.563903 | 2.1:+23483393 | MS.gene63744:CDS |
| TCAACATCACTCGCAGCAGC+AGG | 0.565239 | 2.1:-23482572 | None:intergenic |
| GAAAAGGAAGCGAGCTCACA+GGG | 0.567524 | 2.1:+23483772 | MS.gene63744:CDS |
| TGAAGATGAAGATGAAGAGG+AGG | 0.567889 | 2.1:+23482082 | MS.gene63744:CDS |
| AAGCTTCCTTGAAGCTGCTG+AGG | 0.568779 | 2.1:-23483873 | None:intergenic |
| TGAAGATGAAGATGAGGATG+AGG | 0.569285 | 2.1:+23483523 | MS.gene63744:CDS |
| TATTGAAGATGAAGATGAAG+AGG | 0.569364 | 2.1:+23482079 | MS.gene63744:CDS |
| ATCGCTGTCAGAACCAACAT+CGG | 0.576903 | 2.1:-23482048 | None:intergenic |
| CGTCTGTAAAGTTGTTGGAT+GGG | 0.581376 | 2.1:+23482373 | MS.gene63744:CDS |
| CTCCCTCGAAGCTGTTGAGG+AGG | 0.593342 | 2.1:-23482438 | None:intergenic |
| AAGTTCTTAGCTCCCGATGT+TGG | 0.594788 | 2.1:+23482035 | MS.gene63744:CDS |
| AAAGTGTTCGCTGAAGATGC+TGG | 0.595637 | 2.1:+23482176 | MS.gene63744:CDS |
| TTGCTGAAGATGTTGGCTTG+AGG | 0.599340 | 2.1:+23483618 | MS.gene63744:CDS |
| TGGGTTTGCAAAAGTCCAGA+TGG | 0.610274 | 2.1:+23481894 | MS.gene63744:CDS |
| TCGCTGAAGATGCTGGCTTG+AGG | 0.620018 | 2.1:+23482183 | MS.gene63744:CDS |
| GTAGGTAACTCATGAATCTG+TGG | 0.623545 | 2.1:+23483280 | MS.gene63744:intron |
| TTATTCTCTTGTGGGGAACG+AGG | 0.629352 | 2.1:+23483400 | MS.gene63744:CDS |
| GTGGTGTTAAGAAGAAAATG+TGG | 0.629707 | 2.1:+23482258 | MS.gene63744:CDS |
| GTGGTGTTAAGAAGAAAATG+TGG | 0.629707 | 2.1:+23483693 | MS.gene63744:CDS |
| AAATGGAGGAGAATTAGTTG+AGG | 0.641746 | 2.1:+23480715 | MS.gene63744:CDS |
| TACGAGAACAATAGTAAACA+AGG | 0.643032 | 2.1:+23482212 | MS.gene63744:CDS |
| AAAGTGTTTGCTGAAGATGT+TGG | 0.647008 | 2.1:+23483611 | MS.gene63744:CDS |
| GTTTGCAAAAGTCCAGATGG+TGG | 0.648430 | 2.1:+23481897 | MS.gene63744:CDS |
| GATTACTGAATCATCATCTG+AGG | 0.648513 | 2.1:+23479858 | MS.gene63744:CDS |
| TATCTTCAACAACTTCAGGA+TGG | 0.648539 | 2.1:+23483345 | MS.gene63744:CDS |
| TGGGTTTGCAAAAGTCCTGA+TGG | 0.652543 | 2.1:+23483317 | MS.gene63744:CDS |
| TGTTATTGAAGATGAAGATG+AGG | 0.654393 | 2.1:+23483517 | MS.gene63744:CDS |
| AGAGAATAAGGGTAAGAACA+TGG | 0.658460 | 2.1:-23481945 | None:intergenic |
| AGAGAATAAGGGTAAGAACA+TGG | 0.658460 | 2.1:-23483386 | None:intergenic |
| GTAGGTAACCAATGAATCTG+CGG | 0.663446 | 2.1:+23481857 | MS.gene63744:intron |
| GGCTGAACCCGAGAAACCTG+CGG | 0.683846 | 2.1:+23483988 | MS.gene63744:intron |
| GTTTGCAAAAGTCCTGATGG+TGG | 0.690415 | 2.1:+23483320 | MS.gene63744:CDS |
| AGTTGGTTCTGACAGTGATG+AGG | 0.694565 | 2.1:+23483493 | MS.gene63744:CDS |
| ATGGTGGATTATCTTCAGGG+TGG | 0.726118 | 2.1:+23481913 | MS.gene63744:CDS |
| GGTCTGAGTTCAGAAAATGG+AGG | 0.770712 | 2.1:+23480701 | MS.gene63744:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAATTTAAATTGACA+AGG | - | chr2.1:23482675-23482694 | None:intergenic | 10.0% |
| !! | TTACAAAATAGTAATTATTT+GGG | + | chr2.1:23481360-23481379 | MS.gene63744:intron | 10.0% |
| !! | TTTACAAAATAGTAATTATT+TGG | + | chr2.1:23481359-23481378 | MS.gene63744:intron | 10.0% |
| !!! | ATAATTTTCTTAATAGATTA+TGG | + | chr2.1:23480499-23480518 | MS.gene63744:intron | 10.0% |
| !!! | ATTTTTAGGATTTTTTTAAT+TGG | - | chr2.1:23480549-23480568 | None:intergenic | 10.0% |
| !!! | TTTTTAGGATTTTTTTAATT+GGG | - | chr2.1:23480548-23480567 | None:intergenic | 10.0% |
| !! | ATAAAATATAAAAACAGTGA+CGG | - | chr2.1:23481439-23481458 | None:intergenic | 15.0% |
| !! | TAGATTATAATAGTGAAAAT+CGG | + | chr2.1:23480423-23480442 | MS.gene63744:intron | 15.0% |
| !! | TTTAAATAAATAGAGAAGTT+AGG | + | chr2.1:23481333-23481352 | MS.gene63744:intron | 15.0% |
| !!! | AATTTGAAAAATGGATTAAT+TGG | + | chr2.1:23480919-23480938 | MS.gene63744:intron | 15.0% |
| !!! | ACTATTTTCACATATTTTTT+TGG | + | chr2.1:23481668-23481687 | MS.gene63744:intron | 15.0% |
| !!! | ATAAAAATCACTTTTCTAAT+GGG | - | chr2.1:23480581-23480600 | None:intergenic | 15.0% |
| !!! | ATAAATAATTGATTTGAGTT+TGG | + | chr2.1:23480241-23480260 | MS.gene63744:intron | 15.0% |
| !!! | TCATTTTCGTAAATTATTAT+AGG | + | chr2.1:23480348-23480367 | MS.gene63744:intron | 15.0% |
| !!! | TTTTAATGGAATTTTAATGT+AGG | + | chr2.1:23481839-23481858 | MS.gene63744:intron | 15.0% |
| !! | AAATGTTAGTATTGTTAGTA+GGG | + | chr2.1:23481706-23481725 | MS.gene63744:intron | 20.0% |
| !! | AAGTGAATAAAGTTTGATTA+AGG | - | chr2.1:23479914-23479933 | None:intergenic | 20.0% |
| !! | AGTATATGATACTTACATTT+CGG | - | chr2.1:23482601-23482620 | None:intergenic | 20.0% |
| !! | AGTTAAAATCATATGAAACA+AGG | - | chr2.1:23479965-23479984 | None:intergenic | 20.0% |
| !! | ATTCCAATTTGCAAAAAAAT+TGG | - | chr2.1:23482995-23483014 | None:intergenic | 20.0% |
| !! | CAACATAATTAGCAATAATA+AGG | - | chr2.1:23483954-23483973 | None:intergenic | 20.0% |
| !! | TAAATGTTAGTATTGTTAGT+AGG | + | chr2.1:23481705-23481724 | MS.gene63744:intron | 20.0% |
| !! | TACTAATGAAATATCAATGT+AGG | + | chr2.1:23483262-23483281 | MS.gene63744:intron | 20.0% |
| !!! | AAAAGGAGATTTTTATTGTT+TGG | + | chr2.1:23483664-23483683 | MS.gene63744:CDS | 20.0% |
| !!! | AAATAGTAATTATTTGGGAT+CGG | + | chr2.1:23481365-23481384 | MS.gene63744:intron | 20.0% |
| !!! | GATAAAAATCACTTTTCTAA+TGG | - | chr2.1:23480582-23480601 | None:intergenic | 20.0% |
| !!! | TAATCTCTTATTATTTTCTC+TGG | + | chr2.1:23482646-23482665 | MS.gene63744:intron | 20.0% |
| !!! | TCATAATCACTTTTATTGAT+GGG | - | chr2.1:23480220-23480239 | None:intergenic | 20.0% |
| !!! | TCCATTTTTCAAATTTTTAC+CGG | - | chr2.1:23480914-23480933 | None:intergenic | 20.0% |
| !!! | TTCATAATCACTTTTATTGA+TGG | - | chr2.1:23480221-23480240 | None:intergenic | 20.0% |
| !!! | TTCTGAATTCTGTTTTTTAA+TGG | + | chr2.1:23481825-23481844 | MS.gene63744:intron | 20.0% |
| ! | AAAACATCAAAGAGAATCAT+GGG | - | chr2.1:23483233-23483252 | None:intergenic | 25.0% |
| ! | AATCATTATCATTGGGTTTA+AGG | - | chr2.1:23480023-23480042 | None:intergenic | 25.0% |
| ! | ACCGGTAAAAATTTGAAAAA+TGG | + | chr2.1:23480910-23480929 | MS.gene63744:intron | 25.0% |
| ! | ACTGAATTATCTGTATTGTA+TGG | + | chr2.1:23482787-23482806 | MS.gene63744:intron | 25.0% |
| ! | ATCACATTCATGACTATTAT+TGG | + | chr2.1:23481598-23481617 | MS.gene63744:intron | 25.0% |
| ! | ATCATTATCATTGGGTTTAA+GGG | - | chr2.1:23480022-23480041 | None:intergenic | 25.0% |
| ! | ATTCAAGATGGAAAAACATT+GGG | + | chr2.1:23480680-23480699 | MS.gene63744:CDS | 25.0% |
| ! | CAATCTAATAAGCAAAAATG+AGG | - | chr2.1:23482522-23482541 | None:intergenic | 25.0% |
| ! | TAAAACATCAAAGAGAATCA+TGG | - | chr2.1:23483234-23483253 | None:intergenic | 25.0% |
| ! | TACGAGAACAATAGTAAAAA+AGG | + | chr2.1:23483647-23483666 | MS.gene63744:CDS | 25.0% |
| ! | TAGAATTAACCAGAAAATGA+AGG | - | chr2.1:23482835-23482854 | None:intergenic | 25.0% |
| ! | TATTATATGTGCATGTTTCT+TGG | + | chr2.1:23482691-23482710 | MS.gene63744:intron | 25.0% |
| ! | TTAGTTGAGGTAAAACAATT+TGG | + | chr2.1:23480728-23480747 | MS.gene63744:intron | 25.0% |
| !! | ACAAGGAGATTTTTATTGTT+TGG | + | chr2.1:23482229-23482248 | MS.gene63744:CDS | 25.0% |
| !! | ATCTATGATTTGGAAAATCA+AGG | - | chr2.1:23481568-23481587 | None:intergenic | 25.0% |
| !! | ATGTAAGACATTTCATTTTC+TGG | + | chr2.1:23481118-23481137 | MS.gene63744:intron | 25.0% |
| !! | TCTATGATTTGGAAAATCAA+GGG | - | chr2.1:23481567-23481586 | None:intergenic | 25.0% |
| !!! | ACTCCAATTTTTTTGCAAAT+TGG | + | chr2.1:23482989-23483008 | MS.gene63744:intron | 25.0% |
| !!! | ATGGGAAAAAAAGCATTTTT+AGG | - | chr2.1:23480563-23480582 | None:intergenic | 25.0% |
| !!! | GATTTTTATTGTTTGGTTTG+TGG | + | chr2.1:23482236-23482255 | MS.gene63744:CDS | 25.0% |
| !!! | TAGATTGTATTGATTTTTGC+AGG | + | chr2.1:23482535-23482554 | MS.gene63744:intron | 25.0% |
| !!! | TTTTTTTGGAACGAGTAAAA+AGG | + | chr2.1:23481682-23481701 | MS.gene63744:intron | 25.0% |
| AAAGAGAATCATGGGATATA+AGG | - | chr2.1:23483225-23483244 | None:intergenic | 30.0% | |
| AACCCATTTAAACCCATAAA+AGG | - | chr2.1:23480158-23480177 | None:intergenic | 30.0% | |
| AAGAGAATCATGGGATATAA+GGG | - | chr2.1:23483224-23483243 | None:intergenic | 30.0% | |
| AAGAGACCTAACAGAATAAA+AGG | - | chr2.1:23481248-23481267 | None:intergenic | 30.0% | |
| AAGTGTTATCTCTTCATTCA+TGG | + | chr2.1:23482935-23482954 | MS.gene63744:intron | 30.0% | |
| ACCCATTTAAACCCATAAAA+GGG | - | chr2.1:23480157-23480176 | None:intergenic | 30.0% | |
| AGAGACCTAACAGAATAAAA+GGG | - | chr2.1:23481247-23481266 | None:intergenic | 30.0% | |
| AGTTAAAGAGTGAAGTGATA+AGG | - | chr2.1:23483179-23483198 | None:intergenic | 30.0% | |
| CAATACATACTACTATTCCT+CGG | - | chr2.1:23483020-23483039 | None:intergenic | 30.0% | |
| GAAAACGATTCACAAAACAA+AGG | - | chr2.1:23481515-23481534 | None:intergenic | 30.0% | |
| GATTCAAGATGGAAAAACAT+TGG | + | chr2.1:23480679-23480698 | MS.gene63744:CDS | 30.0% | |
| GCTTCAACAAAATGTTACTA+AGG | + | chr2.1:23480077-23480096 | MS.gene63744:CDS | 30.0% | |
| GGAACTGAATCATTATCATT+GGG | - | chr2.1:23480030-23480049 | None:intergenic | 30.0% | |
| GGAATAGTAGTATGTATTGT+TGG | + | chr2.1:23483021-23483040 | MS.gene63744:intron | 30.0% | |
| TACGAGAACAATAGTAAACA+AGG | + | chr2.1:23482212-23482231 | MS.gene63744:CDS | 30.0% | |
| TAGTAACTTAGTGTTATGTC+AGG | + | chr2.1:23483122-23483141 | MS.gene63744:intron | 30.0% | |
| TATTGAAGATGAAGATGAAG+AGG | + | chr2.1:23482079-23482098 | MS.gene63744:CDS | 30.0% | |
| TCAATTAAATTGACACTAGC+AGG | - | chr2.1:23481216-23481235 | None:intergenic | 30.0% | |
| TCTTCATTCATGGCTATTAT+TGG | + | chr2.1:23482945-23482964 | MS.gene63744:intron | 30.0% | |
| TGAATCATCTCTGATAATCA+GGG | - | chr2.1:23481804-23481823 | None:intergenic | 30.0% | |
| TGGAACTGAATCATTATCAT+TGG | - | chr2.1:23480031-23480050 | None:intergenic | 30.0% | |
| TGTTATTGAAGATGAAGATG+AGG | + | chr2.1:23482076-23482095 | MS.gene63744:CDS | 30.0% | |
| TTAAGAAGAAAATGTGGAAG+AGG | + | chr2.1:23482264-23482283 | MS.gene63744:CDS | 30.0% | |
| ! | ACCCTTTTATGGGTTTAAAT+GGG | + | chr2.1:23480153-23480172 | MS.gene63744:intron | 30.0% |
| ! | ATGTAAGATCCTTCATTTTC+TGG | + | chr2.1:23482823-23482842 | MS.gene63744:intron | 30.0% |
| ! | TACCCTTTTATGGGTTTAAA+TGG | + | chr2.1:23480152-23480171 | MS.gene63744:intron | 30.0% |
| ! | TGTATCCCTTTTATTCTGTT+AGG | + | chr2.1:23481239-23481258 | MS.gene63744:intron | 30.0% |
| !!! | GTAATCACATGTTTTGATGT+CGG | + | chr2.1:23480944-23480963 | MS.gene63744:intron | 30.0% |
| !!! | TTTTATTGTTTGGTTTGTGG+TGG | + | chr2.1:23482239-23482258 | MS.gene63744:CDS | 30.0% |
| AAATCCTTCAACACAATAGC+TGG | - | chr2.1:23482413-23482432 | None:intergenic | 35.0% | |
| AAATGGAGGAGAATTAGTTG+AGG | + | chr2.1:23480715-23480734 | MS.gene63744:CDS | 35.0% | |
| AAGCTCTTGAAAATCTTGGT+GGG | + | chr2.1:23481407-23481426 | MS.gene63744:intron | 35.0% | |
| ACTTAGTGTTATGTCAGGAA+TGG | + | chr2.1:23483127-23483146 | MS.gene63744:intron | 35.0% | |
| AGAAACTGGCATCTATGATT+TGG | - | chr2.1:23481578-23481597 | None:intergenic | 35.0% | |
| AGAAATAGTTACGAGATGCA+CGG | + | chr2.1:23482876-23482895 | MS.gene63744:intron | 35.0% | |
| AGAGAATAAGGGTAAGAACA+TGG | - | chr2.1:23481948-23481967 | None:intergenic | 35.0% | |
| AGTTAAGAAGTGGAGTGATA+AGG | - | chr2.1:23481748-23481767 | None:intergenic | 35.0% | |
| AGTTTCCAGATATACAGAAC+CGG | + | chr2.1:23481182-23481201 | MS.gene63744:intron | 35.0% | |
| ATAAGGGTAAGAACATGGTT+TGG | - | chr2.1:23481943-23481962 | None:intergenic | 35.0% | |
| ATATGTGCATGTTTCTTGGT+TGG | + | chr2.1:23482695-23482714 | MS.gene63744:intron | 35.0% | |
| CAAATCGTCTGTAAAGTTGT+TGG | + | chr2.1:23482368-23482387 | MS.gene63744:CDS | 35.0% | |
| CAAGTCGTCTGTAAAATTGT+TGG | + | chr2.1:23483803-23483822 | MS.gene63744:CDS | 35.0% | |
| CAGAATTTATTTCCAACCTC+TGG | - | chr2.1:23481537-23481556 | None:intergenic | 35.0% | |
| CTTAGTGTTATGTCAGGAAT+GGG | + | chr2.1:23483128-23483147 | MS.gene63744:intron | 35.0% | |
| GAAAATGTGGAAGAGGTTTA+AGG | + | chr2.1:23482271-23482290 | MS.gene63744:CDS | 35.0% | |
| GAATCATCTCTGATAATCAG+GGG | - | chr2.1:23481803-23481822 | None:intergenic | 35.0% | |
| GATCAAGCTCTTGAAAATCT+TGG | + | chr2.1:23481403-23481422 | MS.gene63744:intron | 35.0% | |
| GATTACTGAATCATCATCTG+AGG | + | chr2.1:23479858-23479877 | MS.gene63744:CDS | 35.0% | |
| GGATTATCTTCAACAACTTC+AGG | + | chr2.1:23483341-23483360 | MS.gene63744:CDS | 35.0% | |
| GTCATGAATGTGATAGAAAC+TGG | - | chr2.1:23481592-23481611 | None:intergenic | 35.0% | |
| GTGAATCATCTCTGATAATC+AGG | - | chr2.1:23481805-23481824 | None:intergenic | 35.0% | |
| TAAAGAGTGAAGTGATAAGG+TGG | - | chr2.1:23483176-23483195 | None:intergenic | 35.0% | |
| TATCTTCAACAACTTCAGGA+TGG | + | chr2.1:23483345-23483364 | MS.gene63744:CDS | 35.0% | |
| TCAATTCAATTGACACTAGC+AGG | - | chr2.1:23482916-23482935 | None:intergenic | 35.0% | |
| TCGTCTGTAAAATTGTTGGT+TGG | + | chr2.1:23483807-23483826 | MS.gene63744:CDS | 35.0% | |
| TCTGTATTGTATGGTAGTCT+AGG | + | chr2.1:23482796-23482815 | MS.gene63744:intron | 35.0% | |
| TCTTACCCTTATTCTCTTGT+GGG | + | chr2.1:23481951-23481970 | MS.gene63744:CDS | 35.0% | |
| TTAGTGTTATGTCAGGAATG+GGG | + | chr2.1:23483129-23483148 | MS.gene63744:intron | 35.0% | |
| TTATAGAACAATGCTGATGC+TGG | + | chr2.1:23479985-23480004 | MS.gene63744:intron | 35.0% | |
| TTCTTACCCTTATTCTCTTG+TGG | + | chr2.1:23481950-23481969 | MS.gene63744:CDS | 35.0% | |
| ! | AAAGTGTTTGCTGAAGATGT+TGG | + | chr2.1:23483611-23483630 | MS.gene63744:CDS | 35.0% |
| ! | AGCTTCACTTTACCCTTTTA+TGG | + | chr2.1:23480142-23480161 | MS.gene63744:intron | 35.0% |
| ! | CGTCTGTAAAATTGTTGGTT+GGG | + | chr2.1:23483808-23483827 | MS.gene63744:CDS | 35.0% |
| ! | GCTTCACTTTACCCTTTTAT+GGG | + | chr2.1:23480143-23480162 | MS.gene63744:intron | 35.0% |
| ! | GTGGTGTTAAGAAGAAAATG+TGG | + | chr2.1:23482258-23482277 | MS.gene63744:CDS | 35.0% |
| ! | GTGTGTCTGATTGATAATCT+AGG | + | chr2.1:23481091-23481110 | MS.gene63744:intron | 35.0% |
| ! | TCTATTGATTGTTGTGTCTG+CGG | + | chr2.1:23480636-23480655 | MS.gene63744:intron | 35.0% |
| ! | TTTGGGATCGGATATTGATT+TGG | + | chr2.1:23481377-23481396 | MS.gene63744:intron | 35.0% |
| ! | TTTTGTGAATCGTTTTCCAG+AGG | + | chr2.1:23481518-23481537 | MS.gene63744:intron | 35.0% |
| !! | AGCTGAAAAGAAAAGCATCA+AGG | - | chr2.1:23481042-23481061 | None:intergenic | 35.0% |
| !! | ATGCTTTTAACCAGAAGTGT+CGG | - | chr2.1:23480284-23480303 | None:intergenic | 35.0% |
| !! | GCTGAAAAGAAAAGCATCAA+GGG | - | chr2.1:23481041-23481060 | None:intergenic | 35.0% |
| !! | TGGGTTCATGTATTTTTGCT+TGG | + | chr2.1:23480172-23480191 | MS.gene63744:intron | 35.0% |
| !!! | TATGTTGCGTTGATTTTCAC+AGG | + | chr2.1:23483967-23483986 | MS.gene63744:intron | 35.0% |
| AAGGATGGTGAGATTCAAGA+TGG | + | chr2.1:23480668-23480687 | MS.gene63744:intron | 40.0% | |
| ACAATCCGGTTCTGTATATC+TGG | - | chr2.1:23481190-23481209 | None:intergenic | 40.0% | |
| ACACTAGCAGGATAACAATC+CGG | - | chr2.1:23481204-23481223 | None:intergenic | 40.0% | |
| AGCATTCAACTGCTGTACTA+AGG | + | chr2.1:23483747-23483766 | MS.gene63744:CDS | 40.0% | |
| AGCATTCCACTACTGTACTA+AGG | + | chr2.1:23482312-23482331 | MS.gene63744:CDS | 40.0% | |
| ATAAGGGTGACATTGTGGTT+AGG | - | chr2.1:23483208-23483227 | None:intergenic | 40.0% | |
| ATCACTGTCAGAACCAACTT+CGG | - | chr2.1:23483492-23483511 | None:intergenic | 40.0% | |
| ATCAGAAACCGCAGATTCAT+TGG | - | chr2.1:23481868-23481887 | None:intergenic | 40.0% | |
| ATGACTATTATTGGTACGCG+AGG | + | chr2.1:23481607-23481626 | MS.gene63744:intron | 40.0% | |
| CAAGCTCTTGAAAATCTTGG+TGG | + | chr2.1:23481406-23481425 | MS.gene63744:intron | 40.0% | |
| CGTCTGTAAAGTTGTTGGAT+GGG | + | chr2.1:23482373-23482392 | MS.gene63744:CDS | 40.0% | |
| CTACTGTACTAAGGACGAAA+AGG | + | chr2.1:23482321-23482340 | MS.gene63744:CDS | 40.0% | |
| CTGATAATCAGGGGACATAA+GGG | - | chr2.1:23481794-23481813 | None:intergenic | 40.0% | |
| CTTACCCTTATTCTCTTGTG+GGG | + | chr2.1:23481952-23481971 | MS.gene63744:CDS | 40.0% | |
| GAGTTTGGTTATACTCTCTG+TGG | + | chr2.1:23480256-23480275 | MS.gene63744:intron | 40.0% | |
| GATGAAGGTGAAGATGAGTT+TGG | + | chr2.1:23483545-23483564 | MS.gene63744:CDS | 40.0% | |
| GGATGAAAGTGAAGATGAGT+TGG | + | chr2.1:23482109-23482128 | MS.gene63744:CDS | 40.0% | |
| GTAGGTAACCAATGAATCTG+CGG | + | chr2.1:23481857-23481876 | MS.gene63744:intron | 40.0% | |
| GTAGGTAACTCATGAATCTG+TGG | + | chr2.1:23483280-23483299 | MS.gene63744:intron | 40.0% | |
| GTTACCAGCTATTGTGTTGA+AGG | + | chr2.1:23482406-23482425 | MS.gene63744:CDS | 40.0% | |
| GTTGAAGATAATCCACCATC+AGG | - | chr2.1:23483335-23483354 | None:intergenic | 40.0% | |
| TCGTCTGTAAAGTTGTTGGA+TGG | + | chr2.1:23482372-23482391 | MS.gene63744:CDS | 40.0% | |
| TCTGATAATCAGGGGACATA+AGG | - | chr2.1:23481795-23481814 | None:intergenic | 40.0% | |
| TGAAGATGAAGATGAAGAGG+AGG | + | chr2.1:23482082-23482101 | MS.gene63744:CDS | 40.0% | |
| TGAAGATGAAGATGAGGATG+AGG | + | chr2.1:23483523-23483542 | MS.gene63744:CDS | 40.0% | |
| TGCGGTTTCTGATGCTAAAT+GGG | + | chr2.1:23481875-23481894 | MS.gene63744:CDS | 40.0% | |
| TGTGGTTTCTGATGCTGAAT+GGG | + | chr2.1:23483298-23483317 | MS.gene63744:CDS | 40.0% | |
| TTACCCTTATTCTCTTGTGG+GGG | + | chr2.1:23481953-23481972 | MS.gene63744:CDS | 40.0% | |
| TTGGGTCTGAGTTCAGAAAA+TGG | + | chr2.1:23480698-23480717 | MS.gene63744:CDS | 40.0% | |
| TTTCGTCCTTAGTACAGTAG+TGG | - | chr2.1:23482321-23482340 | None:intergenic | 40.0% | |
| TTTGCAAATTGGAATTGCCG+AGG | + | chr2.1:23483000-23483019 | MS.gene63744:intron | 40.0% | |
| ! | GTATGCTAGCTTAGAAGTCT+CGG | + | chr2.1:23483049-23483068 | MS.gene63744:intron | 40.0% |
| !! | AAAGAAAAGCATCAAGGGAG+TGG | - | chr2.1:23481036-23481055 | None:intergenic | 40.0% |
| !! | AGAACATGGTTTGGTGTTGA+AGG | - | chr2.1:23483375-23483394 | None:intergenic | 40.0% |
| !! | AGCTGACAAGAAAAGCATCA+AGG | - | chr2.1:23482750-23482769 | None:intergenic | 40.0% |
| !! | ATAACCGACTCACACACTTT+TGG | - | chr2.1:23481296-23481315 | None:intergenic | 40.0% |
| !! | CAGATGGTGGATTATCTTCA+GGG | + | chr2.1:23481910-23481929 | MS.gene63744:CDS | 40.0% |
| !! | TAACCGACTCACACACTTTT+GGG | - | chr2.1:23481295-23481314 | None:intergenic | 40.0% |
| !! | TGACAAGAAAAGCATCAAGG+CGG | - | chr2.1:23482747-23482766 | None:intergenic | 40.0% |
| !! | TGATTTTTGCAGGTTGAACC+CGG | + | chr2.1:23482545-23482564 | MS.gene63744:intron | 40.0% |
| !!! | ACATGTTTTGATGTCGGTGT+TGG | + | chr2.1:23480950-23480969 | MS.gene63744:intron | 40.0% |
| AAGTTCTTAGCTCCCGAAGT+TGG | + | chr2.1:23483476-23483495 | MS.gene63744:CDS | 45.0% | |
| AAGTTCTTAGCTCCCGATGT+TGG | + | chr2.1:23482035-23482054 | MS.gene63744:CDS | 45.0% | |
| ATAATCAGGGGACATAAGGG+TGG | - | chr2.1:23481791-23481810 | None:intergenic | 45.0% | |
| ATCGCTGTCAGAACCAACAT+CGG | - | chr2.1:23482051-23482070 | None:intergenic | 45.0% | |
| CACAGTGTTTGTGTCATGTC+TGG | - | chr2.1:23480888-23480907 | None:intergenic | 45.0% | |
| CATCCCCCACAAGAGAATAA+GGG | - | chr2.1:23481959-23481978 | None:intergenic | 45.0% | |
| CCTGAAGATAATCCACCATC+TGG | - | chr2.1:23481912-23481931 | None:intergenic | 45.0% | |
| CGTTCCCCACAAGAGAATAA+GGG | - | chr2.1:23483400-23483419 | None:intergenic | 45.0% | |
| CTGCGGAATTGTTTGAAGGA+TGG | + | chr2.1:23480653-23480672 | MS.gene63744:intron | 45.0% | |
| CTGCGGTTTCTGATGCTAAA+TGG | + | chr2.1:23481874-23481893 | MS.gene63744:CDS | 45.0% | |
| CTGCTGTACTAAGGACGAAA+AGG | + | chr2.1:23483756-23483775 | MS.gene63744:CDS | 45.0% | |
| CTGTGGTTTCTGATGCTGAA+TGG | + | chr2.1:23483297-23483316 | MS.gene63744:CDS | 45.0% | |
| GAAGATGAGGATGAGGATGA+AGG | + | chr2.1:23483530-23483549 | MS.gene63744:CDS | 45.0% | |
| GGGATATAAGGGTGACATTG+TGG | - | chr2.1:23483213-23483232 | None:intergenic | 45.0% | |
| GGTCTGAGTTCAGAAAATGG+AGG | + | chr2.1:23480701-23480720 | MS.gene63744:CDS | 45.0% | |
| GTGTCTGCGGAATTGTTTGA+AGG | + | chr2.1:23480649-23480668 | MS.gene63744:intron | 45.0% | |
| GTTTGCAAAAGTCCAGATGG+TGG | + | chr2.1:23481897-23481916 | MS.gene63744:CDS | 45.0% | |
| GTTTGCAAAAGTCCTGATGG+TGG | + | chr2.1:23483320-23483339 | MS.gene63744:CDS | 45.0% | |
| TATGTCAGGAATGGGGAACT+GGG | + | chr2.1:23483136-23483155 | MS.gene63744:intron | 45.0% | |
| TCACTGTCAGAACCAACTTC+GGG | - | chr2.1:23483491-23483510 | None:intergenic | 45.0% | |
| TCAGTGTTGTGTCTTGTGTC+TGG | + | chr2.1:23480381-23480400 | MS.gene63744:intron | 45.0% | |
| TCATCCCCCACAAGAGAATA+AGG | - | chr2.1:23481960-23481979 | None:intergenic | 45.0% | |
| TCGTTCCCCACAAGAGAATA+AGG | - | chr2.1:23483401-23483420 | None:intergenic | 45.0% | |
| TGAAGATGAAGAGGAGGATG+AGG | + | chr2.1:23482088-23482107 | MS.gene63744:CDS | 45.0% | |
| TGAAGTGATAAGGTGGTCGA+GGG | - | chr2.1:23483169-23483188 | None:intergenic | 45.0% | |
| TGACACAAACACTGTGACAC+CGG | + | chr2.1:23480892-23480911 | MS.gene63744:intron | 45.0% | |
| TGGGTTTGCAAAAGTCCAGA+TGG | + | chr2.1:23481894-23481913 | MS.gene63744:CDS | 45.0% | |
| TGGGTTTGCAAAAGTCCTGA+TGG | + | chr2.1:23483317-23483336 | MS.gene63744:CDS | 45.0% | |
| TTATGTCAGGAATGGGGAAC+TGG | + | chr2.1:23483135-23483154 | MS.gene63744:intron | 45.0% | |
| TTATTCTCTTGTGGGGAACG+AGG | + | chr2.1:23483400-23483419 | MS.gene63744:CDS | 45.0% | |
| TTATTCTCTTGTGGGGGATG+AGG | + | chr2.1:23481959-23481978 | MS.gene63744:CDS | 45.0% | |
| TTCAACAACTTCAGGATGGC+CGG | + | chr2.1:23483349-23483368 | MS.gene63744:CDS | 45.0% | |
| TTCAGTTCCAGTTGAGCTTC+AGG | + | chr2.1:23480041-23480060 | MS.gene63744:CDS | 45.0% | |
| TTGTGTCTTGTGTCTGGTGT+TGG | + | chr2.1:23480387-23480406 | MS.gene63744:intron | 45.0% | |
| ! | AAAGTGTTCGCTGAAGATGC+TGG | + | chr2.1:23482176-23482195 | MS.gene63744:CDS | 45.0% |
| ! | ACGCCTACCATCAAAAGTGT+CGG | + | chr2.1:23480996-23481015 | MS.gene63744:intron | 45.0% |
| ! | AGACCCAAAAGTGTGTGAGT+CGG | + | chr2.1:23481289-23481308 | MS.gene63744:intron | 45.0% |
| ! | AGCAGCTTCAAGGAAGCTTT+TGG | + | chr2.1:23483877-23483896 | MS.gene63744:CDS | 45.0% |
| ! | CATCGGGAGCTAAGAACTTT+TGG | - | chr2.1:23482034-23482053 | None:intergenic | 45.0% |
| ! | CTTCGGGAGCTAAGAACTTT+TGG | - | chr2.1:23483475-23483494 | None:intergenic | 45.0% |
| ! | GTGAATCGTTTTCCAGAGGT+TGG | + | chr2.1:23481522-23481541 | MS.gene63744:intron | 45.0% |
| !! | AGTTGGTTCTGACAGTGATG+AGG | + | chr2.1:23483493-23483512 | MS.gene63744:CDS | 45.0% |
| !! | ATGGTGGATTATCTTCAGGG+TGG | + | chr2.1:23481913-23481932 | MS.gene63744:CDS | 45.0% |
| !! | CCAGATGGTGGATTATCTTC+AGG | + | chr2.1:23481909-23481928 | MS.gene63744:CDS | 45.0% |
| !! | CGTGTTTGGTGTATACGTGT+TGG | - | chr2.1:23480979-23480998 | None:intergenic | 45.0% |
| !! | CTACCTATGAAGCACTGACA+CGG | + | chr2.1:23480859-23480878 | MS.gene63744:intron | 45.0% |
| !! | CTTTTGATGGTAGGCGTGTT+TGG | - | chr2.1:23480993-23481012 | None:intergenic | 45.0% |
| !! | TGCTGAAGATGTTGGCTTGA+GGG | + | chr2.1:23483619-23483638 | MS.gene63744:CDS | 45.0% |
| !! | TTGCTGAAGATGTTGGCTTG+AGG | + | chr2.1:23483618-23483637 | MS.gene63744:CDS | 45.0% |
| !!! | TGTAGCACCGACACTTTTGA+TGG | - | chr2.1:23481006-23481025 | None:intergenic | 45.0% |
| AAGCTTCCTTGAAGCTGCTG+AGG | - | chr2.1:23483876-23483895 | None:intergenic | 50.0% | |
| ATAAGGGTGGCTTCGTGGTT+GGG | - | chr2.1:23481778-23481797 | None:intergenic | 50.0% | |
| ATGTCAGGAATGGGGAACTG+GGG | + | chr2.1:23483137-23483156 | MS.gene63744:intron | 50.0% | |
| ATTCCTCCTCAACAGCTTCG+AGG | + | chr2.1:23482435-23482454 | MS.gene63744:CDS | 50.0% | |
| GAAAAGGAAGCGAGCTCACA+GGG | + | chr2.1:23483772-23483791 | MS.gene63744:CDS | 50.0% | |
| GAAAAGGATGCGAGCTCACA+GGG | + | chr2.1:23482337-23482356 | MS.gene63744:CDS | 50.0% | |
| GCATGATCCTGAAGCTCAAC+TGG | - | chr2.1:23480051-23480070 | None:intergenic | 50.0% | |
| GGGGGATGAGGAAGCAATTA+TGG | + | chr2.1:23481971-23481990 | MS.gene63744:CDS | 50.0% | |
| GGGTGACATTGTGGTTAGGA+CGG | - | chr2.1:23483204-23483223 | None:intergenic | 50.0% | |
| GTGAAGTGATAAGGTGGTCG+AGG | - | chr2.1:23483170-23483189 | None:intergenic | 50.0% | |
| TCGCTGTCAGAACCAACATC+GGG | - | chr2.1:23482050-23482069 | None:intergenic | 50.0% | |
| TCTCCGTGTCAGTGCTTCAT+AGG | - | chr2.1:23480865-23480884 | None:intergenic | 50.0% | |
| TGGATTCCTCAGCAGCTTCA+AGG | + | chr2.1:23483867-23483886 | MS.gene63744:CDS | 50.0% | |
| TTCCTCCTCAACAGCTTCGA+GGG | + | chr2.1:23482436-23482455 | MS.gene63744:CDS | 50.0% | |
| ! | AACAGCTTCGAGGGAGCTTT+TGG | + | chr2.1:23482445-23482464 | MS.gene63744:CDS | 50.0% |
| !! | CATGGTTTGGTGTTGAAGGC+CGG | - | chr2.1:23483371-23483390 | None:intergenic | 50.0% |
| !! | GCACCGACACTTTTGATGGT+AGG | - | chr2.1:23481002-23481021 | None:intergenic | 50.0% |
| AAGCTCCCTCGAAGCTGTTG+AGG | - | chr2.1:23482444-23482463 | None:intergenic | 55.0% | |
| ATTCGCAGCCGCAGGTTTCT+CGG | - | chr2.1:23483999-23484018 | None:intergenic | 55.0% | |
| CATAAGGGTGGCTTCGTGGT+TGG | - | chr2.1:23481779-23481798 | None:intergenic | 55.0% | |
| CGAAAAGGAAGCGAGCTCAC+AGG | + | chr2.1:23483771-23483790 | MS.gene63744:CDS | 55.0% | |
| CGAAAAGGATGCGAGCTCAC+AGG | + | chr2.1:23482336-23482355 | MS.gene63744:CDS | 55.0% | |
| TAAGGGTGGCTTCGTGGTTG+GGG | - | chr2.1:23481777-23481796 | None:intergenic | 55.0% | |
| TCAACATCACTCGCAGCAGC+AGG | - | chr2.1:23482575-23482594 | None:intergenic | 55.0% | |
| TCAACATCATTCGCAGCCGC+AGG | - | chr2.1:23484007-23484026 | None:intergenic | 55.0% | |
| ! | ACTCGCAGCAGCAGGTTTTC+CGG | - | chr2.1:23482567-23482586 | None:intergenic | 55.0% |
| !! | TCGCTGAAGATGCTGGCTTG+AGG | + | chr2.1:23482183-23482202 | MS.gene63744:CDS | 55.0% |
| CTCCCTCGAAGCTGTTGAGG+AGG | - | chr2.1:23482441-23482460 | None:intergenic | 60.0% | |
| GGCTGAACCCGAGAAACCTG+CGG | + | chr2.1:23483988-23484007 | MS.gene63744:intron | 60.0% | |
| GGGACATAAGGGTGGCTTCG+TGG | - | chr2.1:23481783-23481802 | None:intergenic | 60.0% | |
| TTCGCAGCCGCAGGTTTCTC+GGG | - | chr2.1:23483998-23484017 | None:intergenic | 60.0% | |
| ! | CTCGCAGCAGCAGGTTTTCC+GGG | - | chr2.1:23482566-23482585 | None:intergenic | 60.0% |
| !! | CTCTGTGGCACCGACACTTC+TGG | + | chr2.1:23480271-23480290 | MS.gene63744:intron | 60.0% |
| GGGGCGGGGGAGTTAAGAAG+TGG | - | chr2.1:23481758-23481777 | None:intergenic | 65.0% | |
| GGGTGGCTTCGTGGTTGGGG+CGG | - | chr2.1:23481774-23481793 | None:intergenic | 70.0% | |
| GGTGGCTTCGTGGTTGGGGC+GGG | - | chr2.1:23481773-23481792 | None:intergenic | 70.0% | |
| GTGGCTTCGTGGTTGGGGCG+GGG | - | chr2.1:23481772-23481791 | None:intergenic | 70.0% | |
| TGGCTTCGTGGTTGGGGCGG+GGG | - | chr2.1:23481771-23481790 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.1 | gene | 23479853 | 23484033 | 23479853 | ID=MS.gene63744 |
| chr2.1 | mRNA | 23479853 | 23484033 | 23479853 | ID=MS.gene63744.t1;Parent=MS.gene63744 |
| chr2.1 | exon | 23479853 | 23479879 | 23479853 | ID=MS.gene63744.t1.exon1;Parent=MS.gene63744.t1 |
| chr2.1 | CDS | 23479853 | 23479879 | 23479853 | ID=cds.MS.gene63744.t1;Parent=MS.gene63744.t1 |
| chr2.1 | exon | 23479991 | 23480098 | 23479991 | ID=MS.gene63744.t1.exon2;Parent=MS.gene63744.t1 |
| chr2.1 | CDS | 23479991 | 23480098 | 23479991 | ID=cds.MS.gene63744.t1;Parent=MS.gene63744.t1 |
| chr2.1 | exon | 23480671 | 23480736 | 23480671 | ID=MS.gene63744.t1.exon3;Parent=MS.gene63744.t1 |
| chr2.1 | CDS | 23480671 | 23480736 | 23480671 | ID=cds.MS.gene63744.t1;Parent=MS.gene63744.t1 |
| chr2.1 | exon | 23481861 | 23482466 | 23481861 | ID=MS.gene63744.t1.exon4;Parent=MS.gene63744.t1 |
| chr2.1 | CDS | 23481861 | 23482466 | 23481861 | ID=cds.MS.gene63744.t1;Parent=MS.gene63744.t1 |
| chr2.1 | exon | 23482557 | 23482604 | 23482557 | ID=MS.gene63744.t1.exon5;Parent=MS.gene63744.t1 |
| chr2.1 | CDS | 23482557 | 23482604 | 23482557 | ID=cds.MS.gene63744.t1;Parent=MS.gene63744.t1 |
| chr2.1 | exon | 23483284 | 23483898 | 23483284 | ID=MS.gene63744.t1.exon6;Parent=MS.gene63744.t1 |
| chr2.1 | CDS | 23483284 | 23483898 | 23483284 | ID=cds.MS.gene63744.t1;Parent=MS.gene63744.t1 |
| chr2.1 | exon | 23483989 | 23484033 | 23483989 | ID=MS.gene63744.t1.exon7;Parent=MS.gene63744.t1 |
| chr2.1 | CDS | 23483989 | 23484033 | 23483989 | ID=cds.MS.gene63744.t1;Parent=MS.gene63744.t1 |
| Gene Sequence |
| Protein sequence |
