Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060194.t1 | RHN74940.1 | 95.4 | 285 | 9 | 3 | 1 | 285 | 1 | 281 | 5.30E-129 | 470.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060194.t1 | A0A072VKC0 | 95.4 | 285 | 9 | 3 | 1 | 285 | 1 | 281 | 3.8e-129 | 470.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049190 | MS.gene060194 | 0.833809 | 4.31E-56 | -1.69E-46 |
| MS.gene049824 | MS.gene060194 | 0.812799 | 3.53E-51 | -1.69E-46 |
| MS.gene050020 | MS.gene060194 | 0.801448 | 8.96E-49 | -1.69E-46 |
| MS.gene050630 | MS.gene060194 | 0.807607 | 4.65E-50 | -1.69E-46 |
| MS.gene050689 | MS.gene060194 | 0.804858 | 1.77E-49 | -1.69E-46 |
| MS.gene05157 | MS.gene060194 | 0.813422 | 2.58E-51 | -1.69E-46 |
| MS.gene051719 | MS.gene060194 | 0.812635 | 3.84E-51 | -1.69E-46 |
| MS.gene052020 | MS.gene060194 | 0.80752 | 4.86E-50 | -1.69E-46 |
| MS.gene052133 | MS.gene060194 | 0.816267 | 6.04E-52 | -1.69E-46 |
| MS.gene052732 | MS.gene060194 | 0.811303 | 7.49E-51 | -1.69E-46 |
| MS.gene052879 | MS.gene060194 | 0.8067 | 7.24E-50 | -1.69E-46 |
| MS.gene053144 | MS.gene060194 | 0.83594 | 1.25E-56 | -1.69E-46 |
| MS.gene053581 | MS.gene060194 | 0.816501 | 5.35E-52 | -1.69E-46 |
| MS.gene05364 | MS.gene060194 | 0.809834 | 1.56E-50 | -1.69E-46 |
| MS.gene054584 | MS.gene060194 | 0.839964 | 1.16E-57 | -1.69E-46 |
| MS.gene055465 | MS.gene060194 | 0.817587 | 3.05E-52 | -1.69E-46 |
| MS.gene055466 | MS.gene060194 | 0.822307 | 2.54E-53 | -1.69E-46 |
| MS.gene055468 | MS.gene060194 | 0.816025 | 6.84E-52 | -1.69E-46 |
| MS.gene055512 | MS.gene060194 | 0.805451 | 1.33E-49 | -1.69E-46 |
| MS.gene055580 | MS.gene060194 | -0.836063 | 1.17E-56 | -1.69E-46 |
| MS.gene055891 | MS.gene060194 | 0.814637 | 1.39E-51 | -1.69E-46 |
| MS.gene056043 | MS.gene060194 | -0.827621 | 1.41E-54 | -1.69E-46 |
| MS.gene05978 | MS.gene060194 | 0.813553 | 2.41E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene060587 | 0.90166 | 2.14E-78 | -1.69E-46 |
| MS.gene060194 | MS.gene061840 | 0.815997 | 6.94E-52 | -1.69E-46 |
| MS.gene060194 | MS.gene061866 | 0.801081 | 1.07E-48 | -1.69E-46 |
| MS.gene060194 | MS.gene061869 | 0.811227 | 7.78E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene061872 | 0.801563 | 8.49E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene061874 | 0.804661 | 1.94E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene061947 | 0.808576 | 2.89E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene062821 | 0.847407 | 1.18E-59 | -1.69E-46 |
| MS.gene060194 | MS.gene063163 | 0.810837 | 9.45E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene063452 | 0.87164 | 5.86E-67 | -1.69E-46 |
| MS.gene060194 | MS.gene064896 | 0.800229 | 1.59E-48 | -1.69E-46 |
| MS.gene060194 | MS.gene064944 | 0.804455 | 2.14E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene065136 | -0.805158 | 1.53E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene065667 | 0.80554 | 1.27E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene065946 | 0.810963 | 8.87E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene066105 | 0.822689 | 2.07E-53 | -1.69E-46 |
| MS.gene060194 | MS.gene066112 | 0.806144 | 9.49E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene066477 | 0.821337 | 4.26E-53 | -1.69E-46 |
| MS.gene060194 | MS.gene066566 | 0.812072 | 5.10E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene066568 | 0.816819 | 4.54E-52 | -1.69E-46 |
| MS.gene060194 | MS.gene066571 | 0.805984 | 1.03E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene067071 | 0.821532 | 3.84E-53 | -1.69E-46 |
| MS.gene060194 | MS.gene067167 | 0.809529 | 1.81E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene067521 | 0.810163 | 1.32E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene068022 | 0.818568 | 1.83E-52 | -1.69E-46 |
| MS.gene060194 | MS.gene068108 | 0.808841 | 2.54E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene068659 | 0.836721 | 7.93E-57 | -1.69E-46 |
| MS.gene060194 | MS.gene068925 | 0.810017 | 1.42E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene070242 | 0.800167 | 1.64E-48 | -1.69E-46 |
| MS.gene060194 | MS.gene070339 | 0.803203 | 3.90E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene070787 | 0.813145 | 2.97E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene070943 | 0.852818 | 3.60E-61 | -1.69E-46 |
| MS.gene060194 | MS.gene071315 | 0.841276 | 5.24E-58 | -1.69E-46 |
| MS.gene060194 | MS.gene071316 | 0.844765 | 6.17E-59 | -1.69E-46 |
| MS.gene060194 | MS.gene07147 | 0.821792 | 3.34E-53 | -1.69E-46 |
| MS.gene060194 | MS.gene072115 | 0.814417 | 1.56E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene072340 | 0.829407 | 5.24E-55 | -1.69E-46 |
| MS.gene060194 | MS.gene073785 | 0.809082 | 2.26E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene073831 | 0.800608 | 1.33E-48 | -1.69E-46 |
| MS.gene060194 | MS.gene074258 | 0.832589 | 8.67E-56 | -1.69E-46 |
| MS.gene060194 | MS.gene08428 | 0.803736 | 3.02E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene09051 | 0.8061 | 9.69E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene09873 | 0.813127 | 3.00E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene20061 | 0.810172 | 1.32E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene20375 | 0.818108 | 2.33E-52 | -1.69E-46 |
| MS.gene060194 | MS.gene20903 | 0.817942 | 2.54E-52 | -1.69E-46 |
| MS.gene060194 | MS.gene21553 | 0.805953 | 1.04E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene22436 | 0.805539 | 1.27E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene22568 | 0.806591 | 7.64E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene22740 | 0.800433 | 1.44E-48 | -1.69E-46 |
| MS.gene060194 | MS.gene23837 | 0.827349 | 1.64E-54 | -1.69E-46 |
| MS.gene060194 | MS.gene23988 | 0.824306 | 8.67E-54 | -1.69E-46 |
| MS.gene060194 | MS.gene24268 | 0.835715 | 1.43E-56 | -1.69E-46 |
| MS.gene060194 | MS.gene25435 | 0.828495 | 8.71E-55 | -1.69E-46 |
| MS.gene060194 | MS.gene25436 | 0.824049 | 9.96E-54 | -1.69E-46 |
| MS.gene060194 | MS.gene26972 | 0.853216 | 2.77E-61 | -1.69E-46 |
| MS.gene060194 | MS.gene27302 | 0.831024 | 2.11E-55 | -1.69E-46 |
| MS.gene060194 | MS.gene27569 | 0.803084 | 4.13E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene28387 | 0.843064 | 1.76E-58 | -1.69E-46 |
| MS.gene060194 | MS.gene29576 | 0.81695 | 4.25E-52 | -1.69E-46 |
| MS.gene060194 | MS.gene29755 | 0.806858 | 6.71E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene29880 | 0.83751 | 4.98E-57 | -1.69E-46 |
| MS.gene060194 | MS.gene30739 | 0.803113 | 4.07E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene31203 | 0.810776 | 9.74E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene31204 | 0.814216 | 1.73E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene34232 | 0.83501 | 2.15E-56 | -1.69E-46 |
| MS.gene060194 | MS.gene34286 | 0.839081 | 1.96E-57 | -1.69E-46 |
| MS.gene060194 | MS.gene34369 | 0.845762 | 3.32E-59 | -1.69E-46 |
| MS.gene060194 | MS.gene34752 | 0.804836 | 1.78E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene35438 | 0.815724 | 7.98E-52 | -1.69E-46 |
| MS.gene060194 | MS.gene35533 | 0.821432 | 4.05E-53 | -1.69E-46 |
| MS.gene060194 | MS.gene35631 | 0.806137 | 9.52E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene36496 | 0.822239 | 2.63E-53 | -1.69E-46 |
| MS.gene060194 | MS.gene38256 | 0.817893 | 2.60E-52 | -1.69E-46 |
| MS.gene060194 | MS.gene38303 | 0.839806 | 1.27E-57 | -1.69E-46 |
| MS.gene060194 | MS.gene38693 | 0.803444 | 3.48E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene39554 | 0.801682 | 8.03E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene40432 | 0.806874 | 6.66E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene41620 | 0.801638 | 8.19E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene41679 | 0.825689 | 4.09E-54 | -1.69E-46 |
| MS.gene060194 | MS.gene42162 | 0.814924 | 1.20E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene43178 | 0.812015 | 5.24E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene43740 | 0.826746 | 2.29E-54 | -1.69E-46 |
| MS.gene060194 | MS.gene44783 | 0.809748 | 1.62E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene44844 | 0.832976 | 6.95E-56 | -1.69E-46 |
| MS.gene060194 | MS.gene45479 | 0.821354 | 4.22E-53 | -1.69E-46 |
| MS.gene060194 | MS.gene47689 | 0.851296 | 9.74E-61 | -1.69E-46 |
| MS.gene060194 | MS.gene47691 | 0.849757 | 2.63E-60 | -1.69E-46 |
| MS.gene060194 | MS.gene47706 | 0.802131 | 6.49E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene48346 | 0.816652 | 4.95E-52 | -1.69E-46 |
| MS.gene060194 | MS.gene49359 | 0.823014 | 1.74E-53 | -1.69E-46 |
| MS.gene060194 | MS.gene50564 | 0.825879 | 3.69E-54 | -1.69E-46 |
| MS.gene060194 | MS.gene52057 | 0.837275 | 5.72E-57 | -1.69E-46 |
| MS.gene060194 | MS.gene54669 | 0.81064 | 1.04E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene55887 | 0.80158 | 8.42E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene56067 | 0.817229 | 3.67E-52 | -1.69E-46 |
| MS.gene060194 | MS.gene56414 | 0.833907 | 4.07E-56 | -1.69E-46 |
| MS.gene060194 | MS.gene56462 | 0.816204 | 6.24E-52 | -1.69E-46 |
| MS.gene060194 | MS.gene57097 | 0.816647 | 4.97E-52 | -1.69E-46 |
| MS.gene060194 | MS.gene57388 | 0.821339 | 4.25E-53 | -1.69E-46 |
| MS.gene060194 | MS.gene60118 | 0.810971 | 8.84E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene62322 | 0.814236 | 1.71E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene62682 | 0.805394 | 1.36E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene62916 | 0.832118 | 1.13E-55 | -1.69E-46 |
| MS.gene060194 | MS.gene63032 | 0.813199 | 2.89E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene63327 | 0.822502 | 2.29E-53 | -1.69E-46 |
| MS.gene060194 | MS.gene63744 | 0.88012 | 7.13E-70 | -1.69E-46 |
| MS.gene060194 | MS.gene64677 | 0.811685 | 6.19E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene65091 | 0.813794 | 2.14E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene65271 | 0.812887 | 3.38E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene65276 | 0.834052 | 3.75E-56 | -1.69E-46 |
| MS.gene060194 | MS.gene66076 | 0.814966 | 1.18E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene66293 | 0.812377 | 4.37E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene66973 | 0.811737 | 6.03E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene67486 | 0.80489 | 1.74E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene68220 | 0.806809 | 6.87E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene68886 | 0.808451 | 3.08E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene69993 | 0.817686 | 2.90E-52 | -1.69E-46 |
| MS.gene060194 | MS.gene70218 | 0.802409 | 5.69E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene71704 | 0.804305 | 2.30E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene71771 | 0.825155 | 5.47E-54 | -1.69E-46 |
| MS.gene060194 | MS.gene71830 | -0.813246 | 2.82E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene72121 | 0.806154 | 9.44E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene72123 | 0.813346 | 2.68E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene74226 | 0.825957 | 3.53E-54 | -1.69E-46 |
| MS.gene060194 | MS.gene75670 | 0.802808 | 4.71E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene76034 | 0.839053 | 1.99E-57 | -1.69E-46 |
| MS.gene060194 | MS.gene76305 | -0.80426 | 2.35E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene76734 | 0.822036 | 2.94E-53 | -1.69E-46 |
| MS.gene060194 | MS.gene77244 | 0.803569 | 3.27E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene78729 | 0.801264 | 9.77E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene80231 | 0.812524 | 4.06E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene80257 | 0.833843 | 4.22E-56 | -1.69E-46 |
| MS.gene060194 | MS.gene80886 | 0.80681 | 6.87E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene81257 | 0.812503 | 4.10E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene81280 | 0.804938 | 1.70E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene83055 | 0.807849 | 4.13E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene83549 | 0.81557 | 8.64E-52 | -1.69E-46 |
| MS.gene060194 | MS.gene83996 | 0.824428 | 8.11E-54 | -1.69E-46 |
| MS.gene060194 | MS.gene84300 | 0.814264 | 1.68E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene86122 | 0.806009 | 1.01E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene86424 | 0.801522 | 8.65E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene88718 | 0.841702 | 4.05E-58 | -1.69E-46 |
| MS.gene060194 | MS.gene89099 | 0.808711 | 2.71E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene89552 | 0.819304 | 1.25E-52 | -1.69E-46 |
| MS.gene060194 | MS.gene89974 | 0.814602 | 1.42E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene90649 | 0.800902 | 1.16E-48 | -1.69E-46 |
| MS.gene060194 | MS.gene90689 | 0.845078 | 5.08E-59 | -1.69E-46 |
| MS.gene060194 | MS.gene91931 | 0.834207 | 3.42E-56 | -1.69E-46 |
| MS.gene060194 | MS.gene91933 | 0.829563 | 4.80E-55 | -1.69E-46 |
| MS.gene060194 | MS.gene93206 | 0.810031 | 1.41E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene93910 | 0.810414 | 1.17E-50 | -1.69E-46 |
| MS.gene060194 | MS.gene93914 | 0.805698 | 1.18E-49 | -1.69E-46 |
| MS.gene060194 | MS.gene94406 | 0.822055 | 2.91E-53 | -1.69E-46 |
| MS.gene060194 | MS.gene95438 | 0.820239 | 7.62E-53 | -1.69E-46 |
| MS.gene060194 | MS.gene95698 | 0.813516 | 2.46E-51 | -1.69E-46 |
| MS.gene060194 | MS.gene95800 | 0.819244 | 1.29E-52 | -1.69E-46 |
| MS.gene060194 | MS.gene96564 | 0.837274 | 5.73E-57 | -1.69E-46 |
| MS.gene060194 | MS.gene97306 | 0.836302 | 1.01E-56 | -1.69E-46 |
| MS.gene060194 | MS.gene97761 | 0.866242 | 3.29E-65 | -1.69E-46 |
| MS.gene060194 | MS.gene97762 | 0.841085 | 5.88E-58 | -1.69E-46 |
| MS.gene060194 | MS.gene99595 | 0.824135 | 9.51E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060194.t1 | MTR_2g076330 | 94.737 | 285 | 11 | 3 | 1 | 285 | 1 | 281 | 2.78e-176 | 498 |
| MS.gene060194.t1 | MTR_2g076330 | 77.215 | 237 | 42 | 5 | 40 | 270 | 280 | 510 | 4.41e-114 | 339 |
| MS.gene060194.t1 | MTR_2g076330 | 92.982 | 285 | 16 | 3 | 1 | 285 | 1 | 281 | 9.84e-176 | 497 |
| MS.gene060194.t1 | MTR_2g076330 | 72.302 | 278 | 48 | 6 | 40 | 311 | 280 | 534 | 3.93e-123 | 363 |
| MS.gene060194.t1 | MTR_2g076330 | 87.719 | 285 | 10 | 3 | 1 | 285 | 1 | 260 | 1.74e-158 | 452 |
| MS.gene060194.t1 | MTR_2g076330 | 72.302 | 278 | 48 | 6 | 40 | 311 | 259 | 513 | 1.73e-123 | 363 |
| MS.gene060194.t1 | MTR_0022s0280 | 51.724 | 87 | 41 | 1 | 170 | 255 | 186 | 272 | 1.38e-21 | 94.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene060194.t1 | AT1G78810 | 38.235 | 170 | 101 | 3 | 80 | 248 | 100 | 266 | 1.90e-31 | 122 |
| MS.gene060194.t1 | AT1G78810 | 39.103 | 156 | 76 | 4 | 106 | 260 | 303 | 440 | 4.26e-25 | 105 |
| MS.gene060194.t1 | AT1G78810 | 38.235 | 170 | 101 | 3 | 80 | 248 | 100 | 266 | 1.90e-31 | 122 |
| MS.gene060194.t1 | AT1G78810 | 39.103 | 156 | 76 | 4 | 106 | 260 | 303 | 440 | 4.26e-25 | 105 |
| MS.gene060194.t1 | AT1G78810 | 38.235 | 170 | 101 | 3 | 80 | 248 | 100 | 266 | 2.10e-31 | 122 |
| MS.gene060194.t1 | AT1G78810 | 39.103 | 156 | 76 | 4 | 106 | 260 | 303 | 440 | 4.25e-25 | 105 |
Find 64 sgRNAs with CRISPR-Local
Find 254 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCATTATCATTGGGTTTA+AGG | 0.083244 | 2.3:-20691377 | None:intergenic |
| GAAAATGTGGAAGAGGTTTA+AGG | 0.178260 | 2.3:+20693620 | MS.gene060194:CDS |
| CTGCGGTTTCTGATGCTAAA+TGG | 0.188130 | 2.3:+20693223 | MS.gene060194:CDS |
| TTCAGTTCCAGTTGAGCTTC+AGG | 0.287848 | 2.3:+20691398 | MS.gene060194:CDS |
| AACAGCTTCGAGGGAGCTTT+TGG | 0.297071 | 2.3:+20693794 | MS.gene060194:CDS |
| ATCATTATCATTGGGTTTAA+GGG | 0.307730 | 2.3:-20691376 | None:intergenic |
| TAATCCTGTTGATGACAATT+AGG | 0.323413 | 2.3:+20695486 | MS.gene060194:CDS |
| CATCGGGAGCTAAGAACTTT+TGG | 0.328140 | 2.3:-20693380 | None:intergenic |
| TTATAGAACAATGCTGATAC+TGG | 0.336827 | 2.3:+20691342 | MS.gene060194:intron |
| GCATGATCCTGAAGCTCAAC+TGG | 0.357402 | 2.3:-20691405 | None:intergenic |
| TGGAACTGAATCATTATCAT+TGG | 0.363030 | 2.3:-20691385 | None:intergenic |
| CCAGATGGTGGATTATCTTC+AGG | 0.369017 | 2.3:+20693258 | MS.gene060194:CDS |
| ATTCGCAGCCGCAGGTTTCT+CGG | 0.373500 | 2.3:-20695344 | None:intergenic |
| TTGGGTCTGAGTTCAGAAAA+TGG | 0.375681 | 2.3:+20692049 | MS.gene060194:CDS |
| GTTACCAGCTATTGTGTTGA+AGG | 0.381631 | 2.3:+20693755 | MS.gene060194:CDS |
| TCTTACCCTTATTCTCTTGT+GGG | 0.382075 | 2.3:+20693300 | MS.gene060194:CDS |
| GCTTCAACAAACTGTTACTA+AGG | 0.384254 | 2.3:+20691434 | MS.gene060194:CDS |
| TTCTTACCCTTATTCTCTTG+TGG | 0.394000 | 2.3:+20693299 | MS.gene060194:CDS |
| TGAAGATGAAGAGGAGGATG+AGG | 0.395179 | 2.3:+20693437 | MS.gene060194:CDS |
| ATCAGAAACCGCAGATTCAT+TGG | 0.399717 | 2.3:-20693214 | None:intergenic |
| TGCGGTTTCTGATGCTAAAT+GGG | 0.405883 | 2.3:+20693224 | MS.gene060194:CDS |
| ACATCCTAATTGTCATCAAC+AGG | 0.429381 | 2.3:-20695490 | None:intergenic |
| GGAACTGAATCATTATCATT+GGG | 0.438391 | 2.3:-20691384 | None:intergenic |
| TTCGCAGCCGCAGGTTTCTC+GGG | 0.467970 | 2.3:-20695343 | None:intergenic |
| CGTCTGTAAAGTTGTTGGTT+GGG | 0.475945 | 2.3:+20693722 | MS.gene060194:CDS |
| AAATCCTTCAACACAATAGC+TGG | 0.483908 | 2.3:-20693759 | None:intergenic |
| TCAACATCATTCGCAGCCGC+AGG | 0.497856 | 2.3:-20695352 | None:intergenic |
| AAGGATGGTGAGATTCAAGA+TGG | 0.504558 | 2.3:+20692019 | MS.gene060194:intron |
| CAGATGGTGGATTATCTTCA+GGG | 0.506852 | 2.3:+20693259 | MS.gene060194:CDS |
| TCGTCTGTAAAGTTGTTGGT+TGG | 0.509226 | 2.3:+20693721 | MS.gene060194:CDS |
| CCTGAAGATAATCCACCATC+TGG | 0.511429 | 2.3:-20693258 | None:intergenic |
| CAAATCGTCTGTAAAGTTGT+TGG | 0.511474 | 2.3:+20693717 | MS.gene060194:CDS |
| TTAAGAAGAAAATGTGGAAG+AGG | 0.512472 | 2.3:+20693613 | MS.gene060194:CDS |
| CGAAAAGGATGCGAGCTCAC+AGG | 0.516813 | 2.3:+20693685 | MS.gene060194:CDS |
| CTACTGTACTAAGGACGAAA+AGG | 0.517368 | 2.3:+20693670 | MS.gene060194:CDS |
| ATTCCTCCTCAACAGCTTCG+AGG | 0.517918 | 2.3:+20693784 | MS.gene060194:CDS |
| TTCCTCCTCAACAGCTTCGA+GGG | 0.527626 | 2.3:+20693785 | MS.gene060194:CDS |
| TTTCGTCCTTAGTACAGTAG+TGG | 0.528949 | 2.3:-20693667 | None:intergenic |
| AGCATTCCACTACTGTACTA+AGG | 0.540686 | 2.3:+20693661 | MS.gene060194:CDS |
| GGATGAAAGTGAAGATGAGT+TGG | 0.543518 | 2.3:+20693458 | MS.gene060194:CDS |
| CTTACCCTTATTCTCTTGTG+GGG | 0.545295 | 2.3:+20693301 | MS.gene060194:CDS |
| AAGCTCCCTCGAAGCTGTTG+AGG | 0.545942 | 2.3:-20693790 | None:intergenic |
| GAAAAGGATGCGAGCTCACA+GGG | 0.552039 | 2.3:+20693686 | MS.gene060194:CDS |
| TTACCCTTATTCTCTTGTGG+GGG | 0.552408 | 2.3:+20693302 | MS.gene060194:CDS |
| TCGCTGTCAGAACCAACATC+GGG | 0.556636 | 2.3:-20693396 | None:intergenic |
| TCAACATCACTCGCAGCAGC+AGG | 0.565239 | 2.3:-20693921 | None:intergenic |
| TGAAGATGAAGATGAAGAGG+AGG | 0.567889 | 2.3:+20693431 | MS.gene060194:CDS |
| TATTGAAGATGAAGATGAAG+AGG | 0.569364 | 2.3:+20693428 | MS.gene060194:CDS |
| ATCGCTGTCAGAACCAACAT+CGG | 0.576903 | 2.3:-20693397 | None:intergenic |
| CTCCCTCGAAGCTGTTGAGG+AGG | 0.593342 | 2.3:-20693787 | None:intergenic |
| AAGTTCTTAGCTCCCGATGT+TGG | 0.594788 | 2.3:+20693384 | MS.gene060194:CDS |
| AAAGTGTTCGCTGAAGATGC+TGG | 0.595637 | 2.3:+20693525 | MS.gene060194:CDS |
| TGGGTTTGCAAAAGTCCAGA+TGG | 0.610274 | 2.3:+20693243 | MS.gene060194:CDS |
| TCGCTGAAGATGCTGGCTTG+AGG | 0.620018 | 2.3:+20693532 | MS.gene060194:CDS |
| GTGGTGTTAAGAAGAAAATG+TGG | 0.629707 | 2.3:+20693607 | MS.gene060194:CDS |
| AAATGGAGGAGAATTAGTTG+AGG | 0.641746 | 2.3:+20692066 | MS.gene060194:CDS |
| TACGAGAACAATAGTAAACA+AGG | 0.643032 | 2.3:+20693561 | MS.gene060194:CDS |
| GTTTGCAAAAGTCCAGATGG+TGG | 0.648430 | 2.3:+20693246 | MS.gene060194:CDS |
| GATTACTGAATCATCATCTG+AGG | 0.648513 | 2.3:+20691216 | MS.gene060194:CDS |
| AGAGAATAAGGGTAAGAACA+TGG | 0.658460 | 2.3:-20693294 | None:intergenic |
| GTAGGTAACCAATGAATCTG+CGG | 0.663446 | 2.3:+20693206 | MS.gene060194:intron |
| GGCTGAACCCGAGAAACCTG+CGG | 0.683846 | 2.3:+20695336 | MS.gene060194:intron |
| ATGGTGGATTATCTTCAGGG+TGG | 0.726118 | 2.3:+20693262 | MS.gene060194:CDS |
| GGTCTGAGTTCAGAAAATGG+AGG | 0.770712 | 2.3:+20692052 | MS.gene060194:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAATTTAAATTGACA+AGG | - | chr2.3:20694024-20694043 | None:intergenic | 10.0% |
| !! | TTACAAAATAGTAATTATTT+GGG | + | chr2.3:20692709-20692728 | MS.gene060194:intron | 10.0% |
| !! | TTTACAAAATAGTAATTATT+TGG | + | chr2.3:20692708-20692727 | MS.gene060194:intron | 10.0% |
| !!! | TTAGTTTTTTTTTTTTAATC+CGG | - | chr2.3:20691898-20691917 | None:intergenic | 10.0% |
| !! | TAGATTATAATAGTGAAAAT+CGG | + | chr2.3:20691774-20691793 | MS.gene060194:intron | 15.0% |
| !! | TTTAAATAAATAGAGAAGTT+AGG | + | chr2.3:20692682-20692701 | MS.gene060194:intron | 15.0% |
| !!! | AATTTGAAAAATGGATTAAT+TGG | + | chr2.3:20692268-20692287 | MS.gene060194:intron | 15.0% |
| !!! | ACTATTTTCACATATTTTTT+TGG | + | chr2.3:20693017-20693036 | MS.gene060194:intron | 15.0% |
| !!! | ATAAATAATTGATTTGAGTT+TGG | + | chr2.3:20691596-20691615 | MS.gene060194:intron | 15.0% |
| !!! | TCATTTTCGTAAATTATTAT+AGG | + | chr2.3:20691699-20691718 | MS.gene060194:intron | 15.0% |
| !!! | TTTTAATGGAATTTTAATGT+AGG | + | chr2.3:20693188-20693207 | MS.gene060194:intron | 15.0% |
| !! | AAATGTTAGTATTGTTAGTA+GGG | + | chr2.3:20693055-20693074 | MS.gene060194:intron | 20.0% |
| !! | AGTATATGATACTTACATTT+CGG | - | chr2.3:20693950-20693969 | None:intergenic | 20.0% |
| !! | ATTCCAATTTGCAAAAAAAT+TGG | - | chr2.3:20694344-20694363 | None:intergenic | 20.0% |
| !! | CAACATAATTAGCAATAATA+AGG | - | chr2.3:20695302-20695321 | None:intergenic | 20.0% |
| !! | TAAATGTTAGTATTGTTAGT+AGG | + | chr2.3:20693054-20693073 | MS.gene060194:intron | 20.0% |
| !! | TACTAATGAAATATCAATGT+AGG | + | chr2.3:20694610-20694629 | MS.gene060194:intron | 20.0% |
| !!! | AAAAGGAGATTTTTATTGTT+TGG | + | chr2.3:20695012-20695031 | MS.gene060194:intron | 20.0% |
| !!! | AAATAGTAATTATTTGGGAT+CGG | + | chr2.3:20692714-20692733 | MS.gene060194:intron | 20.0% |
| !!! | TAATCTCTTATTATTTTCTC+TGG | + | chr2.3:20693995-20694014 | MS.gene060194:intron | 20.0% |
| !!! | TCATAATCACTTTTATTGAT+GGG | - | chr2.3:20691575-20691594 | None:intergenic | 20.0% |
| !!! | TCCATTTTTCAAATTTTTAC+CGG | - | chr2.3:20692263-20692282 | None:intergenic | 20.0% |
| !!! | TTCATAATCACTTTTATTGA+TGG | - | chr2.3:20691576-20691595 | None:intergenic | 20.0% |
| ! | AAAACATCAAAGAGAATCAT+GGG | - | chr2.3:20694581-20694600 | None:intergenic | 25.0% |
| ! | AATCATTATCATTGGGTTTA+AGG | - | chr2.3:20691380-20691399 | None:intergenic | 25.0% |
| ! | ACCGGTAAAAATTTGAAAAA+TGG | + | chr2.3:20692259-20692278 | MS.gene060194:intron | 25.0% |
| ! | ACTGAATTATCTGTATTGTA+TGG | + | chr2.3:20694136-20694155 | MS.gene060194:intron | 25.0% |
| ! | ATCACATTCATGACTATTAT+TGG | + | chr2.3:20692947-20692966 | MS.gene060194:intron | 25.0% |
| ! | ATCATTATCATTGGGTTTAA+GGG | - | chr2.3:20691379-20691398 | None:intergenic | 25.0% |
| ! | ATTCAAGATGGAAAAACATT+GGG | + | chr2.3:20692031-20692050 | MS.gene060194:CDS | 25.0% |
| ! | ATTGTATGTCAGATGTAATT+TGG | + | chr2.3:20695406-20695425 | MS.gene060194:intron | 25.0% |
| ! | CAATCTAATAAGCAAAAATG+AGG | - | chr2.3:20693871-20693890 | None:intergenic | 25.0% |
| ! | TAAAACATCAAAGAGAATCA+TGG | - | chr2.3:20694582-20694601 | None:intergenic | 25.0% |
| ! | TACGAGAACAATAGTAAAAA+AGG | + | chr2.3:20694995-20695014 | MS.gene060194:intron | 25.0% |
| ! | TAGAATTAACCAGAAAATGA+AGG | - | chr2.3:20694184-20694203 | None:intergenic | 25.0% |
| ! | TATTATATGTGCATGTTTCT+TGG | + | chr2.3:20694040-20694059 | MS.gene060194:intron | 25.0% |
| ! | TTAGTTGAGGTAAAACAATT+TGG | + | chr2.3:20692079-20692098 | MS.gene060194:intron | 25.0% |
| !! | ACAAGGAGATTTTTATTGTT+TGG | + | chr2.3:20693578-20693597 | MS.gene060194:CDS | 25.0% |
| !! | ATCTATGATTTGGAAAATCA+AGG | - | chr2.3:20692917-20692936 | None:intergenic | 25.0% |
| !! | ATGTAAGACATTTCATTTTC+TGG | + | chr2.3:20692467-20692486 | MS.gene060194:intron | 25.0% |
| !! | TCTATGATTTGGAAAATCAA+GGG | - | chr2.3:20692916-20692935 | None:intergenic | 25.0% |
| !!! | ACTCCAATTTTTTTGCAAAT+TGG | + | chr2.3:20694338-20694357 | MS.gene060194:intron | 25.0% |
| !!! | GATTTTTATTGTTTGGTTTG+TGG | + | chr2.3:20693585-20693604 | MS.gene060194:CDS | 25.0% |
| !!! | TAGATTGTATTGATTTTTGC+AGG | + | chr2.3:20693884-20693903 | MS.gene060194:intron | 25.0% |
| !!! | TTCTGGATTCTGTTTTTTAA+TGG | + | chr2.3:20693174-20693193 | MS.gene060194:intron | 25.0% |
| !!! | TTTTTTTGGAACGAGTAAAA+AGG | + | chr2.3:20693031-20693050 | MS.gene060194:intron | 25.0% |
| AAAGAGAATCATGGGATATA+AGG | - | chr2.3:20694573-20694592 | None:intergenic | 30.0% | |
| AACCCATTTAAACCCATAAA+AGG | - | chr2.3:20691513-20691532 | None:intergenic | 30.0% | |
| AAGAGAATCATGGGATATAA+GGG | - | chr2.3:20694572-20694591 | None:intergenic | 30.0% | |
| AAGAGACCTAACAGAATAAA+AGG | - | chr2.3:20692597-20692616 | None:intergenic | 30.0% | |
| AAGTGTTATCTCTTCATTCA+TGG | + | chr2.3:20694284-20694303 | MS.gene060194:intron | 30.0% | |
| ACCCATTTAAACCCATAAAA+GGG | - | chr2.3:20691512-20691531 | None:intergenic | 30.0% | |
| AGAGACCTAACAGAATAAAA+GGG | - | chr2.3:20692596-20692615 | None:intergenic | 30.0% | |
| AGTTAAAGAGTGAAGTGATA+AGG | - | chr2.3:20694527-20694546 | None:intergenic | 30.0% | |
| CAATACATACTACTATTCCT+CGG | - | chr2.3:20694369-20694388 | None:intergenic | 30.0% | |
| GAAAACGATTCACAAAACAA+AGG | - | chr2.3:20692864-20692883 | None:intergenic | 30.0% | |
| GATTCAAGATGGAAAAACAT+TGG | + | chr2.3:20692030-20692049 | MS.gene060194:CDS | 30.0% | |
| GGAACTGAATCATTATCATT+GGG | - | chr2.3:20691387-20691406 | None:intergenic | 30.0% | |
| GGAATAGTAGTATGTATTGT+TGG | + | chr2.3:20694370-20694389 | MS.gene060194:intron | 30.0% | |
| TACGAGAACAATAGTAAACA+AGG | + | chr2.3:20693561-20693580 | MS.gene060194:CDS | 30.0% | |
| TAGTAACTTAGTGTTATGTC+AGG | + | chr2.3:20694470-20694489 | MS.gene060194:intron | 30.0% | |
| TATTGAAGATGAAGATGAAG+AGG | + | chr2.3:20693428-20693447 | MS.gene060194:CDS | 30.0% | |
| TCAATTAAATTGACACTAGC+AGG | - | chr2.3:20692565-20692584 | None:intergenic | 30.0% | |
| TCTTCATTCATGGCTATTAT+TGG | + | chr2.3:20694294-20694313 | MS.gene060194:intron | 30.0% | |
| TGAATCATCTCTGATAATCA+GGG | - | chr2.3:20693153-20693172 | None:intergenic | 30.0% | |
| TGGAACTGAATCATTATCAT+TGG | - | chr2.3:20691388-20691407 | None:intergenic | 30.0% | |
| TGTTATTGAAGATGAAGATG+AGG | + | chr2.3:20693425-20693444 | MS.gene060194:CDS | 30.0% | |
| TTAAGAAGAAAATGTGGAAG+AGG | + | chr2.3:20693613-20693632 | MS.gene060194:CDS | 30.0% | |
| TTACAAAAGCTCAAAGAAAC+CGG | + | chr2.3:20691876-20691895 | MS.gene060194:intron | 30.0% | |
| TTATAGAACAATGCTGATAC+TGG | + | chr2.3:20691342-20691361 | MS.gene060194:intron | 30.0% | |
| ! | ACCCTTTTATGGGTTTAAAT+GGG | + | chr2.3:20691508-20691527 | MS.gene060194:intron | 30.0% |
| ! | AGTTTCACTTTACCCTTTTA+TGG | + | chr2.3:20691497-20691516 | MS.gene060194:intron | 30.0% |
| ! | ATGTAAGATCCTTCATTTTC+TGG | + | chr2.3:20694172-20694191 | MS.gene060194:intron | 30.0% |
| ! | GTTTCACTTTACCCTTTTAT+GGG | + | chr2.3:20691498-20691517 | MS.gene060194:intron | 30.0% |
| ! | TACCCTTTTATGGGTTTAAA+TGG | + | chr2.3:20691507-20691526 | MS.gene060194:intron | 30.0% |
| ! | TGTATCCCTTTTATTCTGTT+AGG | + | chr2.3:20692588-20692607 | MS.gene060194:intron | 30.0% |
| !! | TAATCCTGTTGATGACAATT+AGG | + | chr2.3:20695486-20695505 | MS.gene060194:CDS | 30.0% |
| !!! | GTAATCACATGTTTTGATGT+CGG | + | chr2.3:20692293-20692312 | MS.gene060194:intron | 30.0% |
| !!! | TTTTATTGTTTGGTTTGTGG+TGG | + | chr2.3:20693588-20693607 | MS.gene060194:CDS | 30.0% |
| AAATCCTTCAACACAATAGC+TGG | - | chr2.3:20693762-20693781 | None:intergenic | 35.0% | |
| AAATGGAGGAGAATTAGTTG+AGG | + | chr2.3:20692066-20692085 | MS.gene060194:CDS | 35.0% | |
| AAGCTCTTGAAAATCTTGGT+GGG | + | chr2.3:20692756-20692775 | MS.gene060194:intron | 35.0% | |
| ACTTAGTGTTATGTCAGGAA+TGG | + | chr2.3:20694475-20694494 | MS.gene060194:intron | 35.0% | |
| AGAAACTGGCATCTATGATT+TGG | - | chr2.3:20692927-20692946 | None:intergenic | 35.0% | |
| AGAAATAGTTACGAGATGCA+CGG | + | chr2.3:20694225-20694244 | MS.gene060194:intron | 35.0% | |
| AGAGAATAAGGGTAAGAACA+TGG | - | chr2.3:20693297-20693316 | None:intergenic | 35.0% | |
| AGTTAAGAAGTGGAGTGATA+AGG | - | chr2.3:20693097-20693116 | None:intergenic | 35.0% | |
| AGTTTCCAGATATACAGAAC+CGG | + | chr2.3:20692531-20692550 | MS.gene060194:intron | 35.0% | |
| ATAAGGGTAAGAACATGGTT+TGG | - | chr2.3:20693292-20693311 | None:intergenic | 35.0% | |
| ATATGTGCATGTTTCTTGGT+TGG | + | chr2.3:20694044-20694063 | MS.gene060194:intron | 35.0% | |
| CAAATCGTCTGTAAAGTTGT+TGG | + | chr2.3:20693717-20693736 | MS.gene060194:CDS | 35.0% | |
| CAAGTCGTCTGTAAAATTGT+TGG | + | chr2.3:20695151-20695170 | MS.gene060194:intron | 35.0% | |
| CAGAATTTATTTCCAACCTC+TGG | - | chr2.3:20692886-20692905 | None:intergenic | 35.0% | |
| CTTAGTGTTATGTCAGGAAT+GGG | + | chr2.3:20694476-20694495 | MS.gene060194:intron | 35.0% | |
| GAAAATGTGGAAGAGGTTTA+AGG | + | chr2.3:20693620-20693639 | MS.gene060194:CDS | 35.0% | |
| GAATCATCTCTGATAATCAG+GGG | - | chr2.3:20693152-20693171 | None:intergenic | 35.0% | |
| GATCAAGCTCTTGAAAATCT+TGG | + | chr2.3:20692752-20692771 | MS.gene060194:intron | 35.0% | |
| GATTACTGAATCATCATCTG+AGG | + | chr2.3:20691216-20691235 | MS.gene060194:CDS | 35.0% | |
| GCTTCAACAAACTGTTACTA+AGG | + | chr2.3:20691434-20691453 | MS.gene060194:CDS | 35.0% | |
| GGATTATCTTCAACAACTTC+AGG | + | chr2.3:20694689-20694708 | MS.gene060194:intron | 35.0% | |
| GTCATGAATGTGATAGAAAC+TGG | - | chr2.3:20692941-20692960 | None:intergenic | 35.0% | |
| GTGAATCATCTCTGATAATC+AGG | - | chr2.3:20693154-20693173 | None:intergenic | 35.0% | |
| TAAAGAGTGAAGTGATAAGG+TGG | - | chr2.3:20694524-20694543 | None:intergenic | 35.0% | |
| TATCAGAGATGATTCACTTC+TGG | + | chr2.3:20693157-20693176 | MS.gene060194:intron | 35.0% | |
| TATCTTCAACAACTTCAGGA+TGG | + | chr2.3:20694693-20694712 | MS.gene060194:intron | 35.0% | |
| TCAATTCAATTGACACTAGC+AGG | - | chr2.3:20694265-20694284 | None:intergenic | 35.0% | |
| TCGTCTGTAAAATTGTTGGT+TGG | + | chr2.3:20695155-20695174 | MS.gene060194:intron | 35.0% | |
| TCTGTATTGTATGGTAGTCT+AGG | + | chr2.3:20694145-20694164 | MS.gene060194:intron | 35.0% | |
| TCTTACCCTTATTCTCTTGT+GGG | + | chr2.3:20693300-20693319 | MS.gene060194:CDS | 35.0% | |
| TTAGTGTTATGTCAGGAATG+GGG | + | chr2.3:20694477-20694496 | MS.gene060194:intron | 35.0% | |
| TTCTTACCCTTATTCTCTTG+TGG | + | chr2.3:20693299-20693318 | MS.gene060194:CDS | 35.0% | |
| ! | AAAGTGTTTGCTGAAGATGT+TGG | + | chr2.3:20694959-20694978 | MS.gene060194:intron | 35.0% |
| ! | CGTCTGTAAAATTGTTGGTT+GGG | + | chr2.3:20695156-20695175 | MS.gene060194:intron | 35.0% |
| ! | GTGGTGTTAAGAAGAAAATG+TGG | + | chr2.3:20693607-20693626 | MS.gene060194:CDS | 35.0% |
| ! | GTGTGTCTGATTGATAATCT+AGG | + | chr2.3:20692440-20692459 | MS.gene060194:intron | 35.0% |
| ! | TCTATTGATTGTTGTGTCTG+CGG | + | chr2.3:20691987-20692006 | MS.gene060194:intron | 35.0% |
| ! | TTTGGGATCGGATATTGATT+TGG | + | chr2.3:20692726-20692745 | MS.gene060194:intron | 35.0% |
| ! | TTTTGTGAATCGTTTTCCAG+AGG | + | chr2.3:20692867-20692886 | MS.gene060194:intron | 35.0% |
| !! | AGCTGAAAAGAAAAGCATCA+AGG | - | chr2.3:20692391-20692410 | None:intergenic | 35.0% |
| !! | GCTGAAAAGAAAAGCATCAA+GGG | - | chr2.3:20692390-20692409 | None:intergenic | 35.0% |
| !! | TGGGTTCATGTATTTTTGCT+TGG | + | chr2.3:20691527-20691546 | MS.gene060194:intron | 35.0% |
| !!! | TATGTTGCGTTGATTTTCAC+AGG | + | chr2.3:20695315-20695334 | MS.gene060194:intron | 35.0% |
| AAGGATGGTGAGATTCAAGA+TGG | + | chr2.3:20692019-20692038 | MS.gene060194:intron | 40.0% | |
| ACAATCCGGTTCTGTATATC+TGG | - | chr2.3:20692539-20692558 | None:intergenic | 40.0% | |
| ACACTAGCAGGATAACAATC+CGG | - | chr2.3:20692553-20692572 | None:intergenic | 40.0% | |
| AGCATTCAACTGCTGTACTA+AGG | + | chr2.3:20695095-20695114 | MS.gene060194:intron | 40.0% | |
| AGCATTCCACTACTGTACTA+AGG | + | chr2.3:20693661-20693680 | MS.gene060194:CDS | 40.0% | |
| ATAAGGGTGACATTGTGGTT+AGG | - | chr2.3:20694556-20694575 | None:intergenic | 40.0% | |
| ATCACTGTCAGAACCAACTT+CGG | - | chr2.3:20694840-20694859 | None:intergenic | 40.0% | |
| ATCAGAAACCGCAGATTCAT+TGG | - | chr2.3:20693217-20693236 | None:intergenic | 40.0% | |
| ATGACTATTATTGGTACGCG+AGG | + | chr2.3:20692956-20692975 | MS.gene060194:intron | 40.0% | |
| CAAGCTCTTGAAAATCTTGG+TGG | + | chr2.3:20692755-20692774 | MS.gene060194:intron | 40.0% | |
| CTACTGTACTAAGGACGAAA+AGG | + | chr2.3:20693670-20693689 | MS.gene060194:CDS | 40.0% | |
| CTGATAATCAGGGGACATAA+GGG | - | chr2.3:20693143-20693162 | None:intergenic | 40.0% | |
| CTGCGGAATTATTTGAAGGA+TGG | + | chr2.3:20692004-20692023 | MS.gene060194:intron | 40.0% | |
| CTTACCCTTATTCTCTTGTG+GGG | + | chr2.3:20693301-20693320 | MS.gene060194:CDS | 40.0% | |
| GAGTTTGGTTATACTCTCTG+TGG | + | chr2.3:20691611-20691630 | MS.gene060194:intron | 40.0% | |
| GATGAAGGTGAAGATGAGTT+TGG | + | chr2.3:20694893-20694912 | MS.gene060194:intron | 40.0% | |
| GGATGAAAGTGAAGATGAGT+TGG | + | chr2.3:20693458-20693477 | MS.gene060194:CDS | 40.0% | |
| GTAGGTAACCAATGAATCTG+CGG | + | chr2.3:20693206-20693225 | MS.gene060194:intron | 40.0% | |
| GTAGGTAACTCATGAATCTG+TGG | + | chr2.3:20694628-20694647 | MS.gene060194:intron | 40.0% | |
| GTGTCTGCGGAATTATTTGA+AGG | + | chr2.3:20692000-20692019 | MS.gene060194:intron | 40.0% | |
| GTTACCAGCTATTGTGTTGA+AGG | + | chr2.3:20693755-20693774 | MS.gene060194:CDS | 40.0% | |
| GTTGAAGATAATCCACCATC+AGG | - | chr2.3:20694683-20694702 | None:intergenic | 40.0% | |
| TCGTCTGTAAAGTTGTTGGT+TGG | + | chr2.3:20693721-20693740 | MS.gene060194:CDS | 40.0% | |
| TCTGATAATCAGGGGACATA+AGG | - | chr2.3:20693144-20693163 | None:intergenic | 40.0% | |
| TGAAGATGAAGATGAAGAGG+AGG | + | chr2.3:20693431-20693450 | MS.gene060194:CDS | 40.0% | |
| TGAAGATGAAGATGAGGATG+AGG | + | chr2.3:20694871-20694890 | MS.gene060194:intron | 40.0% | |
| TGCGGTTTCTGATGCTAAAT+GGG | + | chr2.3:20693224-20693243 | MS.gene060194:CDS | 40.0% | |
| TGTGGTTTCTGATGCTGAAT+GGG | + | chr2.3:20694646-20694665 | MS.gene060194:intron | 40.0% | |
| TTACCCTTATTCTCTTGTGG+GGG | + | chr2.3:20693302-20693321 | MS.gene060194:CDS | 40.0% | |
| TTGGGTCTGAGTTCAGAAAA+TGG | + | chr2.3:20692049-20692068 | MS.gene060194:CDS | 40.0% | |
| TTTCGTCCTTAGTACAGTAG+TGG | - | chr2.3:20693670-20693689 | None:intergenic | 40.0% | |
| TTTGCAAATTGGAATTGCCG+AGG | + | chr2.3:20694349-20694368 | MS.gene060194:intron | 40.0% | |
| ! | ATATACTGCTGTGCTTTTGC+AGG | + | chr2.3:20695453-20695472 | MS.gene060194:intron | 40.0% |
| ! | CGTCTGTAAAGTTGTTGGTT+GGG | + | chr2.3:20693722-20693741 | MS.gene060194:CDS | 40.0% |
| ! | GTATGCTAGCTTAGAAGTCT+CGG | + | chr2.3:20694398-20694417 | MS.gene060194:intron | 40.0% |
| ! | TATACTGCTGTGCTTTTGCA+GGG | + | chr2.3:20695454-20695473 | MS.gene060194:intron | 40.0% |
| !! | AAAGAAAAGCATCAAGGGAG+TGG | - | chr2.3:20692385-20692404 | None:intergenic | 40.0% |
| !! | AGAACATGGTTTGGTGTTGA+AGG | - | chr2.3:20694723-20694742 | None:intergenic | 40.0% |
| !! | AGCTGACAAGAAAAGCATCA+AGG | - | chr2.3:20694099-20694118 | None:intergenic | 40.0% |
| !! | ATAACCGACTCACACACTTT+TGG | - | chr2.3:20692645-20692664 | None:intergenic | 40.0% |
| !! | CAGATGGTGGATTATCTTCA+GGG | + | chr2.3:20693259-20693278 | MS.gene060194:CDS | 40.0% |
| !! | GTGCTTTTAACCAGAAGTGT+CGG | - | chr2.3:20691639-20691658 | None:intergenic | 40.0% |
| !! | TAACCGACTCACACACTTTT+GGG | - | chr2.3:20692644-20692663 | None:intergenic | 40.0% |
| !! | TGACAAGAAAAGCATCAAGG+CGG | - | chr2.3:20694096-20694115 | None:intergenic | 40.0% |
| !! | TGATTTTTGCAGGTTGAACC+CGG | + | chr2.3:20693894-20693913 | MS.gene060194:intron | 40.0% |
| !!! | ACATGTTTTGATGTCGGTGT+TGG | + | chr2.3:20692299-20692318 | MS.gene060194:intron | 40.0% |
| AAGTTCTTAGCTCCCGAAGT+TGG | + | chr2.3:20694824-20694843 | MS.gene060194:intron | 45.0% | |
| AAGTTCTTAGCTCCCGATGT+TGG | + | chr2.3:20693384-20693403 | MS.gene060194:CDS | 45.0% | |
| ATAATCAGGGGACATAAGGG+TGG | - | chr2.3:20693140-20693159 | None:intergenic | 45.0% | |
| ATCGCTGTCAGAACCAACAT+CGG | - | chr2.3:20693400-20693419 | None:intergenic | 45.0% | |
| CATCCCCCACAAGAGAATAA+GGG | - | chr2.3:20693308-20693327 | None:intergenic | 45.0% | |
| CCTGAAGATAATCCACCATC+TGG | - | chr2.3:20693261-20693280 | None:intergenic | 45.0% | |
| CGTTCCCCACAAGAGAATAA+GGG | - | chr2.3:20694748-20694767 | None:intergenic | 45.0% | |
| CTGCGGTTTCTGATGCTAAA+TGG | + | chr2.3:20693223-20693242 | MS.gene060194:CDS | 45.0% | |
| CTGCTGTACTAAGGACGAAA+AGG | + | chr2.3:20695104-20695123 | MS.gene060194:intron | 45.0% | |
| CTGTGGTTTCTGATGCTGAA+TGG | + | chr2.3:20694645-20694664 | MS.gene060194:intron | 45.0% | |
| GAAGATGAGGATGAGGATGA+AGG | + | chr2.3:20694878-20694897 | MS.gene060194:intron | 45.0% | |
| GGGATATAAGGGTGACATTG+TGG | - | chr2.3:20694561-20694580 | None:intergenic | 45.0% | |
| GGTCTGAGTTCAGAAAATGG+AGG | + | chr2.3:20692052-20692071 | MS.gene060194:CDS | 45.0% | |
| GTTTGCAAAAGTCCAGATGG+TGG | + | chr2.3:20693246-20693265 | MS.gene060194:CDS | 45.0% | |
| GTTTGCAAAAGTCCTGATGG+TGG | + | chr2.3:20694668-20694687 | MS.gene060194:intron | 45.0% | |
| TATGTCAGGAATGGGGAACT+GGG | + | chr2.3:20694484-20694503 | MS.gene060194:intron | 45.0% | |
| TCACTGTCAGAACCAACTTC+GGG | - | chr2.3:20694839-20694858 | None:intergenic | 45.0% | |
| TCAGTGTTGTGTCTTGTGTC+TGG | + | chr2.3:20691732-20691751 | MS.gene060194:intron | 45.0% | |
| TCATCCCCCACAAGAGAATA+AGG | - | chr2.3:20693309-20693328 | None:intergenic | 45.0% | |
| TCGTTCCCCACAAGAGAATA+AGG | - | chr2.3:20694749-20694768 | None:intergenic | 45.0% | |
| TGAAGATGAAGAGGAGGATG+AGG | + | chr2.3:20693437-20693456 | MS.gene060194:CDS | 45.0% | |
| TGAAGTGATAAGGTGGTCGA+GGG | - | chr2.3:20694517-20694536 | None:intergenic | 45.0% | |
| TGGGTTTGCAAAAGTCCAGA+TGG | + | chr2.3:20693243-20693262 | MS.gene060194:CDS | 45.0% | |
| TGGGTTTGCAAAAGTCCTGA+TGG | + | chr2.3:20694665-20694684 | MS.gene060194:intron | 45.0% | |
| TTATGTCAGGAATGGGGAAC+TGG | + | chr2.3:20694483-20694502 | MS.gene060194:intron | 45.0% | |
| TTATTCTCTTGTGGGGAACG+AGG | + | chr2.3:20694748-20694767 | MS.gene060194:intron | 45.0% | |
| TTATTCTCTTGTGGGGGATG+AGG | + | chr2.3:20693308-20693327 | MS.gene060194:CDS | 45.0% | |
| TTCAACAACTTCAGGATGGC+CGG | + | chr2.3:20694697-20694716 | MS.gene060194:intron | 45.0% | |
| TTCAGTTCCAGTTGAGCTTC+AGG | + | chr2.3:20691398-20691417 | MS.gene060194:CDS | 45.0% | |
| TTGTGTCTTGTGTCTGGTGT+TGG | + | chr2.3:20691738-20691757 | MS.gene060194:intron | 45.0% | |
| ! | AAAGTGTTCGCTGAAGATGC+TGG | + | chr2.3:20693525-20693544 | MS.gene060194:CDS | 45.0% |
| ! | ACGCCTACCATCAAAAGTGT+CGG | + | chr2.3:20692345-20692364 | MS.gene060194:intron | 45.0% |
| ! | AGACCCAAAAGTGTGTGAGT+CGG | + | chr2.3:20692638-20692657 | MS.gene060194:intron | 45.0% |
| ! | AGCAGCTTCAAGGAAGCTTT+TGG | + | chr2.3:20695225-20695244 | MS.gene060194:intron | 45.0% |
| ! | CATCGGGAGCTAAGAACTTT+TGG | - | chr2.3:20693383-20693402 | None:intergenic | 45.0% |
| ! | CTTCGGGAGCTAAGAACTTT+TGG | - | chr2.3:20694823-20694842 | None:intergenic | 45.0% |
| ! | GTGAATCGTTTTCCAGAGGT+TGG | + | chr2.3:20692871-20692890 | MS.gene060194:intron | 45.0% |
| !! | AGTTGGTTCTGACAGTGATG+AGG | + | chr2.3:20694841-20694860 | MS.gene060194:intron | 45.0% |
| !! | ATGGTGGATTATCTTCAGGG+TGG | + | chr2.3:20693262-20693281 | MS.gene060194:CDS | 45.0% |
| !! | CCAGATGGTGGATTATCTTC+AGG | + | chr2.3:20693258-20693277 | MS.gene060194:CDS | 45.0% |
| !! | CGTGTTTGGTGTATACGTGT+TGG | - | chr2.3:20692328-20692347 | None:intergenic | 45.0% |
| !! | CTACCTATGAAGCACTGACA+CGG | + | chr2.3:20692208-20692227 | MS.gene060194:intron | 45.0% |
| !! | CTTTTGATGGTAGGCGTGTT+TGG | - | chr2.3:20692342-20692361 | None:intergenic | 45.0% |
| !! | TGCTGAAGATGTTGGCTTGA+GGG | + | chr2.3:20694967-20694986 | MS.gene060194:intron | 45.0% |
| !! | TTGCTGAAGATGTTGGCTTG+AGG | + | chr2.3:20694966-20694985 | MS.gene060194:intron | 45.0% |
| !!! | TGTAGCACCGACACTTTTGA+TGG | - | chr2.3:20692355-20692374 | None:intergenic | 45.0% |
| AAGCTTCCTTGAAGCTGCTG+AGG | - | chr2.3:20695224-20695243 | None:intergenic | 50.0% | |
| ATAAGGGTGGCTTCGTGGTT+GGG | - | chr2.3:20693127-20693146 | None:intergenic | 50.0% | |
| ATGTCAGGAATGGGGAACTG+GGG | + | chr2.3:20694485-20694504 | MS.gene060194:intron | 50.0% | |
| ATTCCTCCTCAACAGCTTCG+AGG | + | chr2.3:20693784-20693803 | MS.gene060194:CDS | 50.0% | |
| CACAGTGTCTGTGTCATGTC+TGG | - | chr2.3:20692237-20692256 | None:intergenic | 50.0% | |
| GAAAAGGAAGCGAGCTCACA+GGG | + | chr2.3:20695120-20695139 | MS.gene060194:intron | 50.0% | |
| GAAAAGGATGCGAGCTCACA+GGG | + | chr2.3:20693686-20693705 | MS.gene060194:CDS | 50.0% | |
| GCATGATCCTGAAGCTCAAC+TGG | - | chr2.3:20691408-20691427 | None:intergenic | 50.0% | |
| GGGGGATGAGGAAGCAATTA+TGG | + | chr2.3:20693320-20693339 | MS.gene060194:CDS | 50.0% | |
| GGGTGACATTGTGGTTAGGA+CGG | - | chr2.3:20694552-20694571 | None:intergenic | 50.0% | |
| GTGAAGTGATAAGGTGGTCG+AGG | - | chr2.3:20694518-20694537 | None:intergenic | 50.0% | |
| TCGCTGTCAGAACCAACATC+GGG | - | chr2.3:20693399-20693418 | None:intergenic | 50.0% | |
| TCTCCGTGTCAGTGCTTCAT+AGG | - | chr2.3:20692214-20692233 | None:intergenic | 50.0% | |
| TGACACAGACACTGTGACAC+CGG | + | chr2.3:20692241-20692260 | MS.gene060194:intron | 50.0% | |
| TGGATTCCTCAGCAGCTTCA+AGG | + | chr2.3:20695215-20695234 | MS.gene060194:intron | 50.0% | |
| TTCCTCCTCAACAGCTTCGA+GGG | + | chr2.3:20693785-20693804 | MS.gene060194:CDS | 50.0% | |
| ! | AACAGCTTCGAGGGAGCTTT+TGG | + | chr2.3:20693794-20693813 | MS.gene060194:CDS | 50.0% |
| !! | CATGGTTTGGTGTTGAAGGC+CGG | - | chr2.3:20694719-20694738 | None:intergenic | 50.0% |
| !! | GCACCGACACTTTTGATGGT+AGG | - | chr2.3:20692351-20692370 | None:intergenic | 50.0% |
| AAGCTCCCTCGAAGCTGTTG+AGG | - | chr2.3:20693793-20693812 | None:intergenic | 55.0% | |
| ATTCGCAGCCGCAGGTTTCT+CGG | - | chr2.3:20695347-20695366 | None:intergenic | 55.0% | |
| CATAAGGGTGGCTTCGTGGT+TGG | - | chr2.3:20693128-20693147 | None:intergenic | 55.0% | |
| CGAAAAGGAAGCGAGCTCAC+AGG | + | chr2.3:20695119-20695138 | MS.gene060194:intron | 55.0% | |
| CGAAAAGGATGCGAGCTCAC+AGG | + | chr2.3:20693685-20693704 | MS.gene060194:CDS | 55.0% | |
| TAAGGGTGGCTTCGTGGTTG+GGG | - | chr2.3:20693126-20693145 | None:intergenic | 55.0% | |
| TCAACATCACTCGCAGCAGC+AGG | - | chr2.3:20693924-20693943 | None:intergenic | 55.0% | |
| TCAACATCATTCGCAGCCGC+AGG | - | chr2.3:20695355-20695374 | None:intergenic | 55.0% | |
| ! | ACTCGCAGCAGCAGGTTTTC+CGG | - | chr2.3:20693916-20693935 | None:intergenic | 55.0% |
| !! | TCGCTGAAGATGCTGGCTTG+AGG | + | chr2.3:20693532-20693551 | MS.gene060194:CDS | 55.0% |
| CTCCCTCGAAGCTGTTGAGG+AGG | - | chr2.3:20693790-20693809 | None:intergenic | 60.0% | |
| GGCTGAACCCGAGAAACCTG+CGG | + | chr2.3:20695336-20695355 | MS.gene060194:intron | 60.0% | |
| GGGACATAAGGGTGGCTTCG+TGG | - | chr2.3:20693132-20693151 | None:intergenic | 60.0% | |
| TTCGCAGCCGCAGGTTTCTC+GGG | - | chr2.3:20695346-20695365 | None:intergenic | 60.0% | |
| ! | CTCGCAGCAGCAGGTTTTCC+GGG | - | chr2.3:20693915-20693934 | None:intergenic | 60.0% |
| !! | CTCTGTGGCACCGACACTTC+TGG | + | chr2.3:20691626-20691645 | MS.gene060194:intron | 60.0% |
| GGGGCGGGGGAGTTAAGAAG+TGG | - | chr2.3:20693107-20693126 | None:intergenic | 65.0% | |
| GGGTGGCTTCGTGGTTGGGG+CGG | - | chr2.3:20693123-20693142 | None:intergenic | 70.0% | |
| GGTGGCTTCGTGGTTGGGGC+GGG | - | chr2.3:20693122-20693141 | None:intergenic | 70.0% | |
| GTGGCTTCGTGGTTGGGGCG+GGG | - | chr2.3:20693121-20693140 | None:intergenic | 70.0% | |
| TGGCTTCGTGGTTGGGGCGG+GGG | - | chr2.3:20693120-20693139 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr2.3 | gene | 20691211 | 20695507 | 20691211 | ID=MS.gene060194 |
| chr2.3 | mRNA | 20691211 | 20695507 | 20691211 | ID=MS.gene060194.t1;Parent=MS.gene060194 |
| chr2.3 | exon | 20691211 | 20691237 | 20691211 | ID=MS.gene060194.t1.exon1;Parent=MS.gene060194.t1 |
| chr2.3 | CDS | 20691211 | 20691237 | 20691211 | ID=cds.MS.gene060194.t1;Parent=MS.gene060194.t1 |
| chr2.3 | exon | 20691348 | 20691455 | 20691348 | ID=MS.gene060194.t1.exon2;Parent=MS.gene060194.t1 |
| chr2.3 | CDS | 20691348 | 20691455 | 20691348 | ID=cds.MS.gene060194.t1;Parent=MS.gene060194.t1 |
| chr2.3 | exon | 20692022 | 20692087 | 20692022 | ID=MS.gene060194.t1.exon3;Parent=MS.gene060194.t1 |
| chr2.3 | CDS | 20692022 | 20692087 | 20692022 | ID=cds.MS.gene060194.t1;Parent=MS.gene060194.t1 |
| chr2.3 | exon | 20693210 | 20693815 | 20693210 | ID=MS.gene060194.t1.exon4;Parent=MS.gene060194.t1 |
| chr2.3 | CDS | 20693210 | 20693815 | 20693210 | ID=cds.MS.gene060194.t1;Parent=MS.gene060194.t1 |
| chr2.3 | exon | 20693906 | 20693953 | 20693906 | ID=MS.gene060194.t1.exon5;Parent=MS.gene060194.t1 |
| chr2.3 | CDS | 20693906 | 20693953 | 20693906 | ID=cds.MS.gene060194.t1;Parent=MS.gene060194.t1 |
| chr2.3 | exon | 20695337 | 20695384 | 20695337 | ID=MS.gene060194.t1.exon6;Parent=MS.gene060194.t1 |
| chr2.3 | CDS | 20695337 | 20695384 | 20695337 | ID=cds.MS.gene060194.t1;Parent=MS.gene060194.t1 |
| chr2.3 | exon | 20695475 | 20695507 | 20695475 | ID=MS.gene060194.t1.exon7;Parent=MS.gene060194.t1 |
| chr2.3 | CDS | 20695475 | 20695507 | 20695475 | ID=cds.MS.gene060194.t1;Parent=MS.gene060194.t1 |
| Gene Sequence |
| Protein sequence |
