Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63797.t1 | XP_003617622.1 | 97.2 | 282 | 7 | 1 | 1 | 281 | 1 | 282 | 8.60E-134 | 486.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63797.t1 | Q9FFK1 | 63.1 | 287 | 97 | 4 | 1 | 281 | 1 | 284 | 7.0e-84 | 312.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63797.t1 | G7K8M8 | 97.2 | 282 | 7 | 1 | 1 | 281 | 1 | 282 | 6.2e-134 | 486.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene072972 | MS.gene63797 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63797.t1 | MTR_5g093600 | 98.233 | 283 | 4 | 1 | 1 | 282 | 1 | 283 | 0.0 | 569 |
| MS.gene63797.t1 | MTR_5g093600 | 99.052 | 211 | 2 | 0 | 72 | 282 | 7 | 217 | 1.30e-155 | 435 |
| MS.gene63797.t1 | MTR_3g108160 | 48.288 | 292 | 125 | 4 | 3 | 282 | 8 | 285 | 3.32e-65 | 206 |
| MS.gene63797.t1 | MTR_3g108160 | 47.945 | 292 | 126 | 4 | 3 | 282 | 8 | 285 | 6.58e-64 | 204 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63797.t1 | AT5G05760 | 59.596 | 297 | 93 | 5 | 1 | 282 | 1 | 285 | 2.60e-108 | 318 |
| MS.gene63797.t1 | AT3G24350 | 43.279 | 305 | 132 | 7 | 3 | 282 | 8 | 296 | 1.49e-63 | 204 |
| MS.gene63797.t1 | AT3G24350 | 41.066 | 319 | 133 | 8 | 3 | 282 | 8 | 310 | 2.55e-59 | 193 |
Find 69 sgRNAs with CRISPR-Local
Find 310 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GACCTTGAATTCGGCTGTTT+TGG | 0.235052 | 5.3:-75277339 | MS.gene63797:CDS |
| AGCTCTTGAATTTCCATTAT+CGG | 0.283903 | 5.3:+75277389 | None:intergenic |
| CTGATGCTGTAAAGGGTTCT+TGG | 0.317200 | 5.3:+75275797 | None:intergenic |
| AAATATTCAGAAGATTGATT+TGG | 0.359781 | 5.3:-75277309 | MS.gene63797:CDS |
| GAGGTAGACGGTTGTTGATT+CGG | 0.366301 | 5.3:+75277726 | None:intergenic |
| GTTGAATTCGGATCTTGAAT+AGG | 0.382249 | 5.3:+75277695 | None:intergenic |
| CCAGAGACATCTCCATTTGC+TGG | 0.382646 | 5.3:+75273090 | None:intergenic |
| CCAGCTGGGATTCCATTTGA+TGG | 0.389350 | 5.3:+75274803 | None:intergenic |
| TTGCTTACACTTTGCGAGCC+TGG | 0.393574 | 5.3:+75277620 | None:intergenic |
| ACCTTAGCTGATTGCCAGCT+GGG | 0.396395 | 5.3:+75274789 | None:intergenic |
| TAGTGGAATCTTCACACATT+TGG | 0.400662 | 5.3:-75272982 | MS.gene63797:CDS |
| AAAGCATCACAAATCGGATT+AGG | 0.401879 | 5.3:-75277669 | MS.gene63797:CDS |
| TGATAGCTAGCTCTCCTTGA+TGG | 0.405749 | 5.3:+75272946 | None:intergenic |
| ATCAAGGAGAGCTAGCTATC+AGG | 0.408272 | 5.3:-75272944 | MS.gene63797:CDS |
| GCTTTGGCTGATGCTGTAAA+GGG | 0.413358 | 5.3:+75275790 | None:intergenic |
| GGCTTTGGCTGATGCTGTAA+AGG | 0.414806 | 5.3:+75275789 | None:intergenic |
| ATCCAAAACAGCCGAATTCA+AGG | 0.417994 | 5.3:+75277337 | None:intergenic |
| TGATATAACGACCTTGAATT+CGG | 0.419068 | 5.3:-75277348 | MS.gene63797:CDS |
| AAGAAAATCGGCGGCGGAGG+CGG | 0.420834 | 5.3:-75277762 | MS.gene63797:CDS |
| ACATCAAGGCTCACGAGAAT+AGG | 0.424620 | 5.3:-75275833 | MS.gene63797:CDS |
| AACATCTTGAAGATGCTTTG+TGG | 0.426481 | 5.3:+75277208 | None:intergenic |
| CACGGTGGTGGTTCAGTAGT+TGG | 0.434345 | 5.3:+75275768 | None:intergenic |
| GAGAGTTTGCAACAAACATC+AGG | 0.446094 | 5.3:-75275717 | MS.gene63797:CDS |
| CTCAAGAAAATCGGCGGCGG+AGG | 0.446694 | 5.3:-75277765 | MS.gene63797:CDS |
| GACATCTCCATTTGCTGGGA+TGG | 0.447518 | 5.3:+75273095 | None:intergenic |
| GATGTTTAATGATCCGATAA+TGG | 0.449546 | 5.3:-75277402 | MS.gene63797:CDS |
| GGTGGTTCAGTAGTTGGCTT+TGG | 0.458863 | 5.3:+75275774 | None:intergenic |
| AACCTTAGCTGATTGCCAGC+TGG | 0.459493 | 5.3:+75274788 | None:intergenic |
| AAACACTCCATCCCAGCAAA+TGG | 0.466839 | 5.3:-75273102 | MS.gene63797:CDS |
| ATGGAGACTCTCAAGAAAAT+CGG | 0.472384 | 5.3:-75277774 | MS.gene63797:CDS |
| TTTGTGATGACTTGAAGAAC+AGG | 0.477282 | 5.3:-75277241 | MS.gene63797:CDS |
| TGTGAAGATTCCACTAAGTT+CGG | 0.478325 | 5.3:+75272989 | None:intergenic |
| AACCGAAAAGCATCACAAAT+CGG | 0.480320 | 5.3:-75277675 | MS.gene63797:CDS |
| CTTCACACATTTGGCTACAA+TGG | 0.501946 | 5.3:-75272973 | MS.gene63797:CDS |
| TCTACTATTACCGAACTTAG+TGG | 0.515127 | 5.3:-75272999 | MS.gene63797:CDS |
| GGAGATGTCTCTGGTACAGC+AGG | 0.516436 | 5.3:-75273081 | MS.gene63797:CDS |
| GATAGCTAGCTCTCCTTGAT+GGG | 0.518110 | 5.3:+75272947 | None:intergenic |
| CCAGCAAATGGAGATGTCTC+TGG | 0.519496 | 5.3:-75273090 | MS.gene63797:CDS |
| GACTTGAAGAACAGGCTCAT+GGG | 0.525233 | 5.3:-75277233 | MS.gene63797:CDS |
| GCTACAATGGTTGCCCATCA+AGG | 0.533000 | 5.3:-75272960 | MS.gene63797:CDS |
| CAAGTCATCACAAACAGCAT+TGG | 0.543561 | 5.3:+75277250 | None:intergenic |
| AAACCTCTCAGAAAATCGCC+AGG | 0.543641 | 5.3:-75277638 | MS.gene63797:CDS |
| TCCCAGCTGGCAATCAGCTA+AGG | 0.546014 | 5.3:-75274790 | MS.gene63797:intron |
| TGACTTGAAGAACAGGCTCA+TGG | 0.554997 | 5.3:-75277234 | MS.gene63797:CDS |
| CCATCAAATGGAATCCCAGC+TGG | 0.557677 | 5.3:-75274803 | MS.gene63797:CDS |
| CGAAGACTATGCTCAAAGTC+GGG | 0.559268 | 5.3:-75273045 | MS.gene63797:CDS |
| TTGTTGATTCGGCGGTGCAG+TGG | 0.565773 | 5.3:+75277737 | None:intergenic |
| GTTGAATTAGACCACGGTGG+TGG | 0.572623 | 5.3:+75275756 | None:intergenic |
| CAGAGACATCTCCATTTGCT+GGG | 0.576744 | 5.3:+75273091 | None:intergenic |
| GTCGGAGTTCCGATCACTGA+TGG | 0.583479 | 5.3:-75277793 | MS.gene63797:CDS |
| TGAGCATAGTCTTCGTGTCG+AGG | 0.583773 | 5.3:+75273053 | None:intergenic |
| ACGAAGACTATGCTCAAAGT+CGG | 0.589584 | 5.3:-75273046 | MS.gene63797:CDS |
| TGAGAGTCTCCATCAGTGAT+CGG | 0.598368 | 5.3:+75277784 | None:intergenic |
| TTTGGCTGATGAGAATTACT+CGG | 0.602135 | 5.3:-75277291 | MS.gene63797:CDS |
| TAGGAACTTTGAGAGGTAGA+CGG | 0.622767 | 5.3:+75277714 | None:intergenic |
| GGAACTCCGACGTGCGATCG+CGG | 0.623758 | 5.3:+75277805 | None:intergenic |
| TCATGTACCCTAGAACATCA+AGG | 0.624353 | 5.3:-75275847 | MS.gene63797:intron |
| TCTTGAATAGGAACTTTGAG+AGG | 0.637072 | 5.3:+75277707 | None:intergenic |
| ATACAGACGGAGATTAGCTG+TGG | 0.639074 | 5.3:-75273126 | MS.gene63797:intron |
| ACTCTCAAGAAAATCGGCGG+CGG | 0.646295 | 5.3:-75277768 | MS.gene63797:CDS |
| GGCAAGTGCTCTGCACAATG+TGG | 0.647784 | 5.3:-75273024 | MS.gene63797:CDS |
| AACTTACCGCGATCGCACGT+CGG | 0.649088 | 5.3:-75277811 | MS.gene63797:CDS |
| GCATTTGTTGAATTAGACCA+CGG | 0.655529 | 5.3:+75275750 | None:intergenic |
| GTAGACGGTTGTTGATTCGG+CGG | 0.669491 | 5.3:+75277729 | None:intergenic |
| AGAGTTTGCAACAAACATCA+GGG | 0.673228 | 5.3:-75275716 | MS.gene63797:intron |
| GGCTGATGAGAATTACTCGG+AGG | 0.694225 | 5.3:-75277288 | MS.gene63797:CDS |
| GAGACTCTCAAGAAAATCGG+CGG | 0.697542 | 5.3:-75277771 | MS.gene63797:CDS |
| CAACTACTGAACCACCACCG+TGG | 0.785732 | 5.3:-75275767 | MS.gene63797:CDS |
| TTTGTTGAATTAGACCACGG+TGG | 0.786289 | 5.3:+75275753 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TAATTTTAATATCATGTTAA+AGG | - | chr5.3:75275044-75275063 | MS.gene63797:intron | 10.0% |
| !! | ACAAAAAACAATAATCTTTA+AGG | + | chr5.3:75275904-75275923 | None:intergenic | 15.0% |
| !! | ATAGATTTAATTCATATACA+CGG | + | chr5.3:75274431-75274450 | None:intergenic | 15.0% |
| !! | CAAAATAAGATATTAAAAAC+TGG | + | chr5.3:75277209-75277228 | None:intergenic | 15.0% |
| !! | TATGTAAATATAAAAACAAG+TGG | - | chr5.3:75276080-75276099 | MS.gene63797:intron | 15.0% |
| !! | TCTTATAAAAGTTTATCATT+AGG | - | chr5.3:75277461-75277480 | MS.gene63797:intron | 15.0% |
| !! | TTTATTAGCAAAGTAAATTT+AGG | - | chr5.3:75277125-75277144 | MS.gene63797:intron | 15.0% |
| !!! | AAATAAAGTATTTTTCTTTC+TGG | + | chr5.3:75275386-75275405 | None:intergenic | 15.0% |
| !!! | AAATCATTTTTGTATAACAT+TGG | - | chr5.3:75276549-75276568 | MS.gene63797:intron | 15.0% |
| !!! | TAAATTTTTTACTTATGCTT+AGG | - | chr5.3:75277520-75277539 | MS.gene63797:intron | 15.0% |
| !!! | TTAATTTGTTGAAAAATGAT+GGG | + | chr5.3:75277275-75277294 | None:intergenic | 15.0% |
| !!! | TTTTTCACTTTTTTCTTATT+TGG | - | chr5.3:75277812-75277831 | MS.gene63797:CDS | 15.0% |
| !! | AAAACATTGTTAAAATCTCT+TGG | - | chr5.3:75275759-75275778 | MS.gene63797:CDS | 20.0% |
| !! | AAAGTAAATTTAGGTCTATA+AGG | - | chr5.3:75277134-75277153 | MS.gene63797:intron | 20.0% |
| !! | AAATATTCAGAAGATTGATT+TGG | - | chr5.3:75273424-75273443 | MS.gene63797:intron | 20.0% |
| !! | AATCATTGACATAAATACAT+TGG | + | chr5.3:75274503-75274522 | None:intergenic | 20.0% |
| !! | AATGAATTATATATCATGTC+AGG | + | chr5.3:75275283-75275302 | None:intergenic | 20.0% |
| !! | ACGTTATATGAAAATGTAAA+GGG | + | chr5.3:75276010-75276029 | None:intergenic | 20.0% |
| !! | ATCATTGACATAAATACATT+GGG | + | chr5.3:75274502-75274521 | None:intergenic | 20.0% |
| !! | ATGAATTATATATCATGTCA+GGG | + | chr5.3:75275282-75275301 | None:intergenic | 20.0% |
| !! | CATTCACAATATAAATTACA+TGG | + | chr5.3:75274862-75274881 | None:intergenic | 20.0% |
| !! | CGATTAAAAAATATTTACAC+TGG | - | chr5.3:75274405-75274424 | MS.gene63797:intron | 20.0% |
| !! | GTTTAAATAATTTAGTTGCA+TGG | + | chr5.3:75275625-75275644 | None:intergenic | 20.0% |
| !!! | AGATATTTTATACATAGTGT+AGG | + | chr5.3:75275574-75275593 | None:intergenic | 20.0% |
| !!! | ATATATATCCTATGTTACTT+TGG | + | chr5.3:75273710-75273729 | None:intergenic | 20.0% |
| !!! | CGAAGTATTATTAATTGAAA+TGG | - | chr5.3:75274003-75274022 | MS.gene63797:intron | 20.0% |
| !!! | CTTAATTTGTTGAAAAATGA+TGG | + | chr5.3:75277276-75277295 | None:intergenic | 20.0% |
| !!! | TGTATATTTTCTAACTTAAC+CGG | - | chr5.3:75277546-75277565 | MS.gene63797:intron | 20.0% |
| !!! | TGTCTCTTATATTTTTGTTT+TGG | - | chr5.3:75277174-75277193 | MS.gene63797:intron | 20.0% |
| !!! | TTTGTTATTGTTTATTGTAG+TGG | - | chr5.3:75273295-75273314 | MS.gene63797:intron | 20.0% |
| !!! | TTTTCTTATTTGGCTATTAA+GGG | - | chr5.3:75277822-75277841 | MS.gene63797:CDS | 20.0% |
| !!! | TTTTTCTTATTTGGCTATTA+AGG | - | chr5.3:75277821-75277840 | MS.gene63797:CDS | 20.0% |
| ! | AAAGAGTTCAAAAATACTGA+AGG | + | chr5.3:75276944-75276963 | None:intergenic | 25.0% |
| ! | AAGAAGTAAATATCTGAAAG+GGG | + | chr5.3:75275704-75275723 | None:intergenic | 25.0% |
| ! | AAGAGTTCAAAAATACTGAA+GGG | + | chr5.3:75276943-75276962 | None:intergenic | 25.0% |
| ! | AATTAAACAAGTAATAGTCG+TGG | - | chr5.3:75275426-75275445 | MS.gene63797:intron | 25.0% |
| ! | ACAAGAAGTAAATATCTGAA+AGG | + | chr5.3:75275706-75275725 | None:intergenic | 25.0% |
| ! | ATAGATTTAATTCACACACA+CGG | + | chr5.3:75274775-75274794 | None:intergenic | 25.0% |
| ! | ATATAGTGACCTTATAACAT+AGG | - | chr5.3:75273863-75273882 | MS.gene63797:intron | 25.0% |
| ! | ATTATTTGCGTTAATTGAGT+GGG | - | chr5.3:75277333-75277352 | MS.gene63797:CDS | 25.0% |
| ! | CAAACAATATTGTGAAATAG+TGG | - | chr5.3:75273840-75273859 | MS.gene63797:intron | 25.0% |
| ! | CAAGAAGTAAATATCTGAAA+GGG | + | chr5.3:75275705-75275724 | None:intergenic | 25.0% |
| ! | CAATACTCTTATCATATCAT+GGG | - | chr5.3:75275167-75275186 | MS.gene63797:intron | 25.0% |
| ! | CACGTTATATGAAAATGTAA+AGG | + | chr5.3:75276011-75276030 | None:intergenic | 25.0% |
| ! | CATTGGAATATTCTCTTTAT+GGG | - | chr5.3:75274269-75274288 | MS.gene63797:intron | 25.0% |
| ! | CCAACATAGATAACAATAAT+CGG | + | chr5.3:75275855-75275874 | None:intergenic | 25.0% |
| ! | CGTTATATGAAAATGTAAAG+GGG | + | chr5.3:75276009-75276028 | None:intergenic | 25.0% |
| ! | CTAACATAATGAAAAAACAG+AGG | - | chr5.3:75276272-75276291 | MS.gene63797:intron | 25.0% |
| ! | CTTGTCATATCTCAATTATT+TGG | - | chr5.3:75277411-75277430 | MS.gene63797:CDS | 25.0% |
| ! | TAACAAATATCTGACATTGT+TGG | - | chr5.3:75275826-75275845 | MS.gene63797:CDS | 25.0% |
| ! | TACTACATAATTAACATGAC+TGG | + | chr5.3:75277235-75277254 | None:intergenic | 25.0% |
| ! | TATAGTGACCTTATAACATA+GGG | - | chr5.3:75273864-75273883 | MS.gene63797:intron | 25.0% |
| ! | TATGTAAATACCAAGATGTA+CGG | + | chr5.3:75277301-75277320 | None:intergenic | 25.0% |
| ! | TATTATTTGCGTTAATTGAG+TGG | - | chr5.3:75277332-75277351 | MS.gene63797:CDS | 25.0% |
| ! | TCAATACTCTTATCATATCA+TGG | - | chr5.3:75275166-75275185 | MS.gene63797:intron | 25.0% |
| ! | TGAAACAATAAAGTTTAGCT+AGG | + | chr5.3:75275253-75275272 | None:intergenic | 25.0% |
| ! | TGAATTATATATCATGTCAG+GGG | + | chr5.3:75275281-75275300 | None:intergenic | 25.0% |
| ! | TTTCTTTACTCTCTTAATTC+AGG | + | chr5.3:75273976-75273995 | None:intergenic | 25.0% |
| !! | ATTTCTCTTTTTCTTAGAAC+AGG | + | chr5.3:75276162-75276181 | None:intergenic | 25.0% |
| !! | GCTAGCTTAAAAGTAAAATT+TGG | + | chr5.3:75276056-75276075 | None:intergenic | 25.0% |
| !! | TGATATCTAAAATCAGAAAC+TGG | + | chr5.3:75276507-75276526 | None:intergenic | 25.0% |
| !! | TGTGTGATCAATTCTTTTAT+AGG | + | chr5.3:75274173-75274192 | None:intergenic | 25.0% |
| !! | TTTTGTAGATTACCATCAAA+TGG | - | chr5.3:75275918-75275937 | MS.gene63797:intron | 25.0% |
| !!! | AGTTTACAGTTCTAAAGTTT+GGG | + | chr5.3:75275647-75275666 | None:intergenic | 25.0% |
| !!! | ATGTTTACTCTTCTGAAATT+TGG | - | chr5.3:75275594-75275613 | MS.gene63797:intron | 25.0% |
| AAAAACAAGTGGCTTTCATT+TGG | - | chr5.3:75276091-75276110 | MS.gene63797:intron | 30.0% | |
| AACGCACAATCATATACATA+TGG | + | chr5.3:75275214-75275233 | None:intergenic | 30.0% | |
| AAGAGACAGTCCTAATATTT+AGG | + | chr5.3:75277162-75277181 | None:intergenic | 30.0% | |
| AAGTTTACAATGAAGCCAAA+AGG | - | chr5.3:75276827-75276846 | MS.gene63797:intron | 30.0% | |
| AATTGTTCAGTTAGAACCTT+AGG | + | chr5.3:75274108-75274127 | None:intergenic | 30.0% | |
| ACACCTTCTATCAGAAATAT+CGG | + | chr5.3:75273599-75273618 | None:intergenic | 30.0% | |
| AGAACTGTAAACTGTTTGAA+GGG | - | chr5.3:75275654-75275673 | MS.gene63797:intron | 30.0% | |
| AGCTCTTGAATTTCCATTAT+CGG | + | chr5.3:75273347-75273366 | None:intergenic | 30.0% | |
| AGGTTTCAACATATTAGAGT+TGG | + | chr5.3:75276871-75276890 | None:intergenic | 30.0% | |
| ATAGTGACCTTATAACATAG+GGG | - | chr5.3:75273865-75273884 | MS.gene63797:intron | 30.0% | |
| ATATGTATATGATTGTGCGT+TGG | - | chr5.3:75275213-75275232 | MS.gene63797:intron | 30.0% | |
| ATTGGCTAACTTTATAGACT+TGG | - | chr5.3:75276567-75276586 | MS.gene63797:intron | 30.0% | |
| ATTGTTCAGTTAGAACCTTA+GGG | + | chr5.3:75274107-75274126 | None:intergenic | 30.0% | |
| CACAATATAAATTACATGGC+CGG | + | chr5.3:75274858-75274877 | None:intergenic | 30.0% | |
| CATTGATAAGATGATCCAAA+GGG | + | chr5.3:75277091-75277110 | None:intergenic | 30.0% | |
| CCATAAAGAGAATATTCCAA+TGG | + | chr5.3:75274271-75274290 | None:intergenic | 30.0% | |
| CCATTGGAATATTCTCTTTA+TGG | - | chr5.3:75274268-75274287 | MS.gene63797:intron | 30.0% | |
| CCGATTATTGTTATCTATGT+TGG | - | chr5.3:75275852-75275871 | MS.gene63797:intron | 30.0% | |
| GATGTTTAATGATCCGATAA+TGG | - | chr5.3:75273331-75273350 | MS.gene63797:intron | 30.0% | |
| GGTTTCAACATATTAGAGTT+GGG | + | chr5.3:75276870-75276889 | None:intergenic | 30.0% | |
| TAATCACACCAAAGTAACAT+AGG | - | chr5.3:75273699-75273718 | MS.gene63797:intron | 30.0% | |
| TAGAACTGTAAACTGTTTGA+AGG | - | chr5.3:75275653-75275672 | MS.gene63797:intron | 30.0% | |
| TCATTGATAAGATGATCCAA+AGG | + | chr5.3:75277092-75277111 | None:intergenic | 30.0% | |
| TGATATAACGACCTTGAATT+CGG | - | chr5.3:75273385-75273404 | MS.gene63797:intron | 30.0% | |
| TTGGCTAACTTTATAGACTT+GGG | - | chr5.3:75276568-75276587 | MS.gene63797:intron | 30.0% | |
| TTGTCAAATAGCAGATATAG+TGG | - | chr5.3:75274542-75274561 | MS.gene63797:intron | 30.0% | |
| TTGTTAAGTAGTGGTTATAG+CGG | - | chr5.3:75274631-75274650 | MS.gene63797:intron | 30.0% | |
| TTTAAGGAATTAGACTTCAG+AGG | + | chr5.3:75275888-75275907 | None:intergenic | 30.0% | |
| ! | AATGAATATGATCTCTGAAG+AGG | + | chr5.3:75273239-75273258 | None:intergenic | 30.0% |
| ! | CAATGTCAGATATTTGTTAG+CGG | + | chr5.3:75275825-75275844 | None:intergenic | 30.0% |
| ! | CATACATATTCTGTGTTGAT+AGG | - | chr5.3:75275474-75275493 | MS.gene63797:intron | 30.0% |
| ! | TAATTCATTTTCTGAGTCTC+AGG | - | chr5.3:75275294-75275313 | MS.gene63797:intron | 30.0% |
| ! | TTCTTTTATAGGACCATAAG+AGG | + | chr5.3:75274162-75274181 | None:intergenic | 30.0% |
| !! | CAGTTTACAGTTCTAAAGTT+TGG | + | chr5.3:75275648-75275667 | None:intergenic | 30.0% |
| !! | GTTTATTCATGTTTTCGAGA+GGG | + | chr5.3:75276797-75276816 | None:intergenic | 30.0% |
| !! | TACAAAGTGTTGTCAAATAG+TGG | - | chr5.3:75273929-75273948 | MS.gene63797:intron | 30.0% |
| !! | TACAAAGTGTTGTTAAGTAG+TGG | - | chr5.3:75274622-75274641 | MS.gene63797:intron | 30.0% |
| !! | TGTTTATTCATGTTTTCGAG+AGG | + | chr5.3:75276798-75276817 | None:intergenic | 30.0% |
| !! | TTCAATGCGGTTTTTCAATT+TGG | - | chr5.3:75277386-75277405 | MS.gene63797:CDS | 30.0% |
| !!! | CGTTCATCTTTTTTGCATAT+GGG | + | chr5.3:75276726-75276745 | None:intergenic | 30.0% |
| !!! | TCGTTCATCTTTTTTGCATA+TGG | + | chr5.3:75276727-75276746 | None:intergenic | 30.0% |
| !!! | TTCAAGATGTTTTGACTACT+AGG | - | chr5.3:75273537-75273556 | MS.gene63797:intron | 30.0% |
| AAATTAAGCTCCGTACATCT+TGG | - | chr5.3:75277288-75277307 | MS.gene63797:CDS | 35.0% | |
| AACATCTTGAAGATGCTTTG+TGG | + | chr5.3:75273528-75273547 | None:intergenic | 35.0% | |
| AATGACTCCCAAATAATGCA+AGG | - | chr5.3:75275543-75275562 | MS.gene63797:intron | 35.0% | |
| ACAGCAAATTTACCACATGT+GGG | + | chr5.3:75277579-75277598 | None:intergenic | 35.0% | |
| AGAAAATCCTCTACCCTAAT+CGG | - | chr5.3:75276331-75276350 | MS.gene63797:intron | 35.0% | |
| AGAGTTTGCAACAAACATCA+GGG | - | chr5.3:75275017-75275036 | MS.gene63797:intron | 35.0% | |
| ATAGTGCTATAGAGCTTGAT+AGG | + | chr5.3:75274303-75274322 | None:intergenic | 35.0% | |
| ATATTCCAATGGATAGTGAG+AGG | + | chr5.3:75274260-75274279 | None:intergenic | 35.0% | |
| ATATTCTCTTTATGGGTCCT+AGG | - | chr5.3:75274276-75274295 | MS.gene63797:intron | 35.0% | |
| ATGGAGACTCTCAAGAAAAT+CGG | - | chr5.3:75272959-75272978 | MS.gene63797:CDS | 35.0% | |
| ATTGAGTAGGATTCTGAACT+AGG | + | chr5.3:75276891-75276910 | None:intergenic | 35.0% | |
| CAAAACCATACCATTACTGA+TGG | + | chr5.3:75276982-75277001 | None:intergenic | 35.0% | |
| CACAAGATAGTTGTTCAATG+CGG | - | chr5.3:75277373-75277392 | MS.gene63797:CDS | 35.0% | |
| CATTCACACAAAGTAACATC+TGG | - | chr5.3:75276408-75276427 | MS.gene63797:intron | 35.0% | |
| CCAAATGTTTGTGTTTGTGT+CGG | - | chr5.3:75273648-75273667 | MS.gene63797:intron | 35.0% | |
| CCTTTGCAAACATTTGAAAG+CGG | - | chr5.3:75275083-75275102 | MS.gene63797:intron | 35.0% | |
| GAAATTTCTGAATGGAACAG+AGG | - | chr5.3:75276189-75276208 | MS.gene63797:intron | 35.0% | |
| GAGATCCATATAGTCAATCA+AGG | + | chr5.3:75274710-75274729 | None:intergenic | 35.0% | |
| GCAATCCTTGATTGACTATA+TGG | - | chr5.3:75274702-75274721 | MS.gene63797:intron | 35.0% | |
| GTCAATTTGTCCATCAGTAA+TGG | - | chr5.3:75276969-75276988 | MS.gene63797:intron | 35.0% | |
| GTTGAATTCGGATCTTGAAT+AGG | + | chr5.3:75273041-75273060 | None:intergenic | 35.0% | |
| TAAAACCCCCCTATGTTATA+AGG | + | chr5.3:75273875-75273894 | None:intergenic | 35.0% | |
| TAGTGACCTTATAACATAGG+GGG | - | chr5.3:75273866-75273885 | MS.gene63797:intron | 35.0% | |
| TAGTGGAATCTTCACACATT+TGG | - | chr5.3:75277751-75277770 | MS.gene63797:CDS | 35.0% | |
| TCATATCATGGGATAGTCAA+TGG | - | chr5.3:75275178-75275197 | MS.gene63797:intron | 35.0% | |
| TCTACTATTACCGAACTTAG+TGG | - | chr5.3:75277734-75277753 | MS.gene63797:CDS | 35.0% | |
| TCTTGAATAGGAACTTTGAG+AGG | + | chr5.3:75273029-75273048 | None:intergenic | 35.0% | |
| TGTGAAGATTCCACTAAGTT+CGG | + | chr5.3:75277747-75277766 | None:intergenic | 35.0% | |
| TTAGAGACCTATTCACAAGA+TGG | - | chr5.3:75276241-75276260 | MS.gene63797:intron | 35.0% | |
| TTAGCGGTAGAAAAGAAATG+AGG | + | chr5.3:75275809-75275828 | None:intergenic | 35.0% | |
| TTATAGACTTGGGAGTTTGA+TGG | - | chr5.3:75276578-75276597 | MS.gene63797:intron | 35.0% | |
| TTGGACGAGTGTAGAATAAA+TGG | - | chr5.3:75276604-75276623 | MS.gene63797:intron | 35.0% | |
| TTTGACTCCACAAATTGCTT+TGG | - | chr5.3:75276686-75276705 | MS.gene63797:intron | 35.0% | |
| TTTGGCTGATGAGAATTACT+CGG | - | chr5.3:75273442-75273461 | MS.gene63797:intron | 35.0% | |
| TTTGTCCATCAGTAATGGTA+TGG | - | chr5.3:75276974-75276993 | MS.gene63797:intron | 35.0% | |
| TTTGTGATGACTTGAAGAAC+AGG | - | chr5.3:75273492-75273511 | MS.gene63797:intron | 35.0% | |
| ! | AAAGCATCACAAATCGGATT+AGG | - | chr5.3:75273064-75273083 | MS.gene63797:CDS | 35.0% |
| ! | CATGTCACACAATTTTTCTC+CGG | - | chr5.3:75274836-75274855 | MS.gene63797:intron | 35.0% |
| ! | CTATAAGGCGCCTAAATATT+AGG | - | chr5.3:75277149-75277168 | MS.gene63797:intron | 35.0% |
| ! | GAGCATTTGTAAGCTTGTTT+AGG | + | chr5.3:75277443-75277462 | None:intergenic | 35.0% |
| ! | GCATTTGTTGAATTAGACCA+CGG | + | chr5.3:75274986-75275005 | None:intergenic | 35.0% |
| ! | TCAGCACTGAAATTTCTGAA+TGG | - | chr5.3:75276181-75276200 | MS.gene63797:intron | 35.0% |
| ! | TGATGCTTTTCGGTTGAATT+CGG | + | chr5.3:75273053-75273072 | None:intergenic | 35.0% |
| !! | AACCGAAAAGCATCACAAAT+CGG | - | chr5.3:75273058-75273077 | MS.gene63797:CDS | 35.0% |
| !! | ATCCGATTTGTGATGCTTTT+CGG | + | chr5.3:75273063-75273082 | None:intergenic | 35.0% |
| !! | GATGTTACTTTGTGTGAATG+AGG | + | chr5.3:75276408-75276427 | None:intergenic | 35.0% |
| !! | TGTCACTTTCTAGTTCTACT+TGG | - | chr5.3:75275107-75275126 | MS.gene63797:intron | 35.0% |
| !! | TTGAAAAATGATGGGCGTTA+TGG | + | chr5.3:75277267-75277286 | None:intergenic | 35.0% |
| !!! | AGTAATGGTATGGTTTTGTC+TGG | - | chr5.3:75276984-75277003 | MS.gene63797:intron | 35.0% |
| !!! | ATTTTTGGCATGACCGATTA+GGG | + | chr5.3:75276347-75276366 | None:intergenic | 35.0% |
| AACCTCTGCTACTATGTCAT+CGG | + | chr5.3:75275352-75275371 | None:intergenic | 40.0% | |
| ACGAAGACTATGCTCAAAGT+CGG | - | chr5.3:75277687-75277706 | MS.gene63797:CDS | 40.0% | |
| ACTCACAACAAGTTTAGCCT+TGG | - | chr5.3:75276652-75276671 | MS.gene63797:intron | 40.0% | |
| ACTCGAAAGTTTGACGAACA+TGG | + | chr5.3:75276470-75276489 | None:intergenic | 40.0% | |
| AGACCTATTCACAAGATGGT+AGG | - | chr5.3:75276245-75276264 | MS.gene63797:intron | 40.0% | |
| AGGGGATTCAAACGATAACA+AGG | + | chr5.3:75275686-75275705 | None:intergenic | 40.0% | |
| AGTGACCTTATAACATAGGG+GGG | - | chr5.3:75273867-75273886 | MS.gene63797:intron | 40.0% | |
| ATATAGTGGCGCTATAGCAT+AGG | - | chr5.3:75274556-75274575 | MS.gene63797:intron | 40.0% | |
| ATCCAAAACAGCCGAATTCA+AGG | + | chr5.3:75273399-75273418 | None:intergenic | 40.0% | |
| ATTTGCGTTAATTGAGTGGG+CGG | - | chr5.3:75277336-75277355 | MS.gene63797:CDS | 40.0% | |
| CAAGTCATCACAAACAGCAT+TGG | + | chr5.3:75273486-75273505 | None:intergenic | 40.0% | |
| CAGGATACCAAAGCAATTTG+TGG | + | chr5.3:75276696-75276715 | None:intergenic | 40.0% | |
| CAGTTAGAACCTTAGGGTAT+GGG | + | chr5.3:75274101-75274120 | None:intergenic | 40.0% | |
| CCGACACAAACACAAACATT+TGG | + | chr5.3:75273651-75273670 | None:intergenic | 40.0% | |
| CCGCTTTCAAATGTTTGCAA+AGG | + | chr5.3:75275086-75275105 | None:intergenic | 40.0% | |
| CTCGAAAGTTTGACGAACAT+GGG | + | chr5.3:75276469-75276488 | None:intergenic | 40.0% | |
| CTTCACACATTTGGCTACAA+TGG | - | chr5.3:75277760-75277779 | MS.gene63797:CDS | 40.0% | |
| CTTTGTGTGAATGAGGTTAG+TGG | + | chr5.3:75276401-75276420 | None:intergenic | 40.0% | |
| GACAGCAAATTTACCACATG+TGG | + | chr5.3:75277580-75277599 | None:intergenic | 40.0% | |
| GACATCAGTATAGTCAACCT+AGG | + | chr5.3:75274365-75274384 | None:intergenic | 40.0% | |
| GACCTATTCACAAGATGGTA+GGG | - | chr5.3:75276246-75276265 | MS.gene63797:intron | 40.0% | |
| GAGAGTTTGCAACAAACATC+AGG | - | chr5.3:75275016-75275035 | MS.gene63797:intron | 40.0% | |
| GATTCAAATGAGGGAAAGAG+GGG | + | chr5.3:75276374-75276393 | None:intergenic | 40.0% | |
| GGAAAAAGAGAAAACACGCA+TGG | + | chr5.3:75274215-75274234 | None:intergenic | 40.0% | |
| GGATTCAAATGAGGGAAAGA+GGG | + | chr5.3:75276375-75276394 | None:intergenic | 40.0% | |
| GGGGATTCAAACGATAACAA+GGG | + | chr5.3:75275685-75275704 | None:intergenic | 40.0% | |
| TATAGAGCTTGATAGGACCT+AGG | + | chr5.3:75274296-75274315 | None:intergenic | 40.0% | |
| TATAGTGGCGCTATAGCATA+GGG | - | chr5.3:75274557-75274576 | MS.gene63797:intron | 40.0% | |
| TCAGTTAGAACCTTAGGGTA+TGG | + | chr5.3:75274102-75274121 | None:intergenic | 40.0% | |
| TCATGTACCCTAGAACATCA+AGG | - | chr5.3:75274886-75274905 | MS.gene63797:intron | 40.0% | |
| TCATTTGTGCTCAGAGCTAT+GGG | + | chr5.3:75276769-75276788 | None:intergenic | 40.0% | |
| TCGAAAGTTTGACGAACATG+GGG | + | chr5.3:75276468-75276487 | None:intergenic | 40.0% | |
| TTACTGTCTCATGAACCCTT+TGG | - | chr5.3:75277073-75277092 | MS.gene63797:intron | 40.0% | |
| TTCATTTGTGCTCAGAGCTA+TGG | + | chr5.3:75276770-75276789 | None:intergenic | 40.0% | |
| TTTGCATATGGGTTTGTGTC+AGG | + | chr5.3:75276715-75276734 | None:intergenic | 40.0% | |
| TTTGTTGAATTAGACCACGG+TGG | + | chr5.3:75274983-75275002 | None:intergenic | 40.0% | |
| ! | GCACCGATATTTCTGATAGA+AGG | - | chr5.3:75273593-75273612 | MS.gene63797:intron | 40.0% |
| ! | GTCAAAGTGCTATAACTCCA+AGG | + | chr5.3:75276672-75276691 | None:intergenic | 40.0% |
| ! | TAGGAACTTTGAGAGGTAGA+CGG | + | chr5.3:75273022-75273041 | None:intergenic | 40.0% |
| !! | CGATTTTCTGAGAGGTTTCA+TGG | + | chr5.3:75273093-75273112 | None:intergenic | 40.0% |
| !! | TCGCTATTTTCTACGATCCT+AGG | - | chr5.3:75274345-75274364 | MS.gene63797:intron | 40.0% |
| !! | TGGCTTTCATTTGGTTCTCA+TGG | - | chr5.3:75276100-75276119 | MS.gene63797:intron | 40.0% |
| !!! | CATTTTTGGCATGACCGATT+AGG | + | chr5.3:75276348-75276367 | None:intergenic | 40.0% |
| !!! | TGTTTTGACTACTAGGACAG+AGG | - | chr5.3:75273544-75273563 | MS.gene63797:intron | 40.0% |
| AAACACTCCATCCCAGCAAA+TGG | - | chr5.3:75277631-75277650 | MS.gene63797:CDS | 45.0% | |
| AAACCTCTCAGAAAATCGCC+AGG | - | chr5.3:75273095-75273114 | MS.gene63797:CDS | 45.0% | |
| AAAGTTTGACGAACATGGGG+AGG | + | chr5.3:75276465-75276484 | None:intergenic | 45.0% | |
| ACATCAAGGCTCACGAGAAT+AGG | - | chr5.3:75274900-75274919 | MS.gene63797:intron | 45.0% | |
| ACCTCTGCTACTATGTCATC+GGG | + | chr5.3:75275351-75275370 | None:intergenic | 45.0% | |
| ACTCACCTCTCACTATCCAT+TGG | - | chr5.3:75274252-75274271 | MS.gene63797:intron | 45.0% | |
| AGGACCATAAGAGGATGTGA+AGG | + | chr5.3:75274153-75274172 | None:intergenic | 45.0% | |
| AGGATGTGAAGGCAGATAGA+GGG | + | chr5.3:75274142-75274161 | None:intergenic | 45.0% | |
| ATAGTGGCGCTATAGCATAG+GGG | - | chr5.3:75274558-75274577 | MS.gene63797:intron | 45.0% | |
| ATCAAGGAGAGCTAGCTATC+AGG | - | chr5.3:75277789-75277808 | MS.gene63797:CDS | 45.0% | |
| ATGGATAGTGAGAGGTGAGT+AGG | + | chr5.3:75274252-75274271 | None:intergenic | 45.0% | |
| CAGAGACATCTCCATTTGCT+GGG | + | chr5.3:75277645-75277664 | None:intergenic | 45.0% | |
| CATTTGTGCTCAGAGCTATG+GGG | + | chr5.3:75276768-75276787 | None:intergenic | 45.0% | |
| CGAAGACTATGCTCAAAGTC+GGG | - | chr5.3:75277688-75277707 | MS.gene63797:CDS | 45.0% | |
| CTCCCAAATAATGCAAGGCT+AGG | - | chr5.3:75275548-75275567 | MS.gene63797:intron | 45.0% | |
| CTGATGCTGTAAAGGGTTCT+TGG | + | chr5.3:75274939-75274958 | None:intergenic | 45.0% | |
| GACACGACAAACACATGTGT+CGG | + | chr5.3:75273629-75273648 | None:intergenic | 45.0% | |
| GACTTGAAGAACAGGCTCAT+GGG | - | chr5.3:75273500-75273519 | MS.gene63797:intron | 45.0% | |
| GAGACTCTCAAGAAAATCGG+CGG | - | chr5.3:75272962-75272981 | MS.gene63797:CDS | 45.0% | |
| GCTGTCATTGCTGATACAGA+CGG | - | chr5.3:75277594-75277613 | MS.gene63797:intron | 45.0% | |
| GCTTTGGCTGATGCTGTAAA+GGG | + | chr5.3:75274946-75274965 | None:intergenic | 45.0% | |
| GGGATTCAAATGAGGGAAAG+AGG | + | chr5.3:75276376-75276395 | None:intergenic | 45.0% | |
| GGTGTCTGTGTAGATGATGA+TGG | + | chr5.3:75273153-75273172 | None:intergenic | 45.0% | |
| GTGTGAATGAGGTTAGTGGT+GGG | + | chr5.3:75276397-75276416 | None:intergenic | 45.0% | |
| TATGTCATCGGGTGAGTGTT+AGG | + | chr5.3:75275340-75275359 | None:intergenic | 45.0% | |
| TCGTGAGCCTTGATGTTCTA+GGG | + | chr5.3:75274896-75274915 | None:intergenic | 45.0% | |
| TCTGCCTTCACATCCTCTTA+TGG | - | chr5.3:75274146-75274165 | MS.gene63797:intron | 45.0% | |
| TGACTTGAAGAACAGGCTCA+TGG | - | chr5.3:75273499-75273518 | MS.gene63797:intron | 45.0% | |
| TGAGAGTCTCCATCAGTGAT+CGG | + | chr5.3:75272952-75272971 | None:intergenic | 45.0% | |
| TGCCCTACCATCTTGTGAAT+AGG | + | chr5.3:75276251-75276270 | None:intergenic | 45.0% | |
| TGTGAATGAGGTTAGTGGTG+GGG | + | chr5.3:75276396-75276415 | None:intergenic | 45.0% | |
| TGTGTGAATGAGGTTAGTGG+TGG | + | chr5.3:75276398-75276417 | None:intergenic | 45.0% | |
| ! | AGTGGTGGGGATTCAAATGA+GGG | + | chr5.3:75276383-75276402 | None:intergenic | 45.0% |
| ! | ATACAGACGGAGATTAGCTG+TGG | - | chr5.3:75277607-75277626 | MS.gene63797:intron | 45.0% |
| ! | CTTGGGAGTTTGATGGCAAT+TGG | - | chr5.3:75276585-75276604 | MS.gene63797:intron | 45.0% |
| ! | GACCTTGAATTCGGCTGTTT+TGG | - | chr5.3:75273394-75273413 | MS.gene63797:intron | 45.0% |
| ! | GAGGTAGACGGTTGTTGATT+CGG | + | chr5.3:75273010-75273029 | None:intergenic | 45.0% |
| ! | GATAGCTAGCTCTCCTTGAT+GGG | + | chr5.3:75277789-75277808 | None:intergenic | 45.0% |
| ! | TAGTGGTGGGGATTCAAATG+AGG | + | chr5.3:75276384-75276403 | None:intergenic | 45.0% |
| ! | TGATAGCTAGCTCTCCTTGA+TGG | + | chr5.3:75277790-75277809 | None:intergenic | 45.0% |
| !! | AAATGATGGGCGTTATGGCA+AGG | + | chr5.3:75277262-75277281 | None:intergenic | 45.0% |
| !! | AGGCCTAGCCTTGCATTATT+TGG | + | chr5.3:75275554-75275573 | None:intergenic | 45.0% |
| !! | GAGTAGGCAAGTTGGTTAGA+GGG | + | chr5.3:75274236-75274255 | None:intergenic | 45.0% |
| !! | GGCCTAGCCTTGCATTATTT+GGG | + | chr5.3:75275553-75275572 | None:intergenic | 45.0% |
| !! | TGAGTAGGCAAGTTGGTTAG+AGG | + | chr5.3:75274237-75274256 | None:intergenic | 45.0% |
| !!! | TATTAATTGATTTTTATTTT+TGG | - | chr5.3:75273268-75273287 | MS.gene63797:intron | 5.0% |
| AACACGCATGGCAAAGAGTG+AGG | + | chr5.3:75274203-75274222 | None:intergenic | 50.0% | |
| AACCTTAGCTGATTGCCAGC+TGG | + | chr5.3:75275948-75275967 | None:intergenic | 50.0% | |
| ACACGCATGGCAAAGAGTGA+GGG | + | chr5.3:75274202-75274221 | None:intergenic | 50.0% | |
| ACCACATGTGGGCATATAGC+CGG | + | chr5.3:75277568-75277587 | None:intergenic | 50.0% | |
| ACCCGATGACATAGTAGCAG+AGG | - | chr5.3:75275347-75275366 | MS.gene63797:intron | 50.0% | |
| ACCTTAGCTGATTGCCAGCT+GGG | + | chr5.3:75275947-75275966 | None:intergenic | 50.0% | |
| ACTCTCAAGAAAATCGGCGG+CGG | - | chr5.3:75272965-75272984 | MS.gene63797:CDS | 50.0% | |
| AGAGTTGGGTTCATTCGCCA+TGG | + | chr5.3:75276856-75276875 | None:intergenic | 50.0% | |
| ATGAAGCCAAAAGGCCACCA+TGG | - | chr5.3:75276836-75276855 | MS.gene63797:intron | 50.0% | |
| CCAGAGACATCTCCATTTGC+TGG | + | chr5.3:75277646-75277665 | None:intergenic | 50.0% | |
| CCAGCAAATGGAGATGTCTC+TGG | - | chr5.3:75277643-75277662 | MS.gene63797:CDS | 50.0% | |
| CCAGCTGGGATTCCATTTGA+TGG | + | chr5.3:75275933-75275952 | None:intergenic | 50.0% | |
| CCATCAAATGGAATCCCAGC+TGG | - | chr5.3:75275930-75275949 | MS.gene63797:intron | 50.0% | |
| CTCGTGAGCCTTGATGTTCT+AGG | + | chr5.3:75274897-75274916 | None:intergenic | 50.0% | |
| CTTTCTCTGCCCATACCCTA+AGG | - | chr5.3:75274089-75274108 | MS.gene63797:intron | 50.0% | |
| GAGCTTGTCAGTGTCGTGTT+CGG | + | chr5.3:75273174-75273193 | None:intergenic | 50.0% | |
| GAGGATGTGAAGGCAGATAG+AGG | + | chr5.3:75274143-75274162 | None:intergenic | 50.0% | |
| GATTAACCCCTGCAATCCCA+GGG | - | chr5.3:75274040-75274059 | MS.gene63797:intron | 50.0% | |
| GCTACAATGGTTGCCCATCA+AGG | - | chr5.3:75277773-75277792 | MS.gene63797:CDS | 50.0% | |
| GGCTGATGAGAATTACTCGG+AGG | - | chr5.3:75273445-75273464 | MS.gene63797:intron | 50.0% | |
| GGCTTGGCTGGATCATCATT+CGG | + | chr5.3:75276436-75276455 | None:intergenic | 50.0% | |
| GTGGCTATATCAGCGCTCAT+AGG | - | chr5.3:75273948-75273967 | MS.gene63797:intron | 50.0% | |
| GTTGAATTAGACCACGGTGG+TGG | + | chr5.3:75274980-75274999 | None:intergenic | 50.0% | |
| TCAAATGAGGGAAAGAGGGG+AGG | + | chr5.3:75276371-75276390 | None:intergenic | 50.0% | |
| TGAGAGGTGAGTAGGCAAGT+TGG | + | chr5.3:75274244-75274263 | None:intergenic | 50.0% | |
| TGAGCATAGTCTTCGTGTCG+AGG | + | chr5.3:75277683-75277702 | None:intergenic | 50.0% | |
| TGATTAACCCCTGCAATCCC+AGG | - | chr5.3:75274039-75274058 | MS.gene63797:intron | 50.0% | |
| TTGCTTACACTTTGCGAGCC+TGG | + | chr5.3:75273116-75273135 | None:intergenic | 50.0% | |
| TTTGACGAACATGGGGAGGA+GGG | + | chr5.3:75276461-75276480 | None:intergenic | 50.0% | |
| ! | GACATCTCCATTTGCTGGGA+TGG | + | chr5.3:75277641-75277660 | None:intergenic | 50.0% |
| ! | GGCTTTGGCTGATGCTGTAA+AGG | + | chr5.3:75274947-75274966 | None:intergenic | 50.0% |
| ! | GGTGGTTCAGTAGTTGGCTT+TGG | + | chr5.3:75274962-75274981 | None:intergenic | 50.0% |
| !! | GTAGACGGTTGTTGATTCGG+CGG | + | chr5.3:75273007-75273026 | None:intergenic | 50.0% |
| !!! | GGAAAGAGGGGAGGCATTTT+TGG | + | chr5.3:75276362-75276381 | None:intergenic | 50.0% |
| AACTTACCGCGATCGCACGT+CGG | - | chr5.3:75272922-75272941 | MS.gene63797:CDS | 55.0% | |
| ACCGGCTATATGCCCACATG+TGG | - | chr5.3:75277564-75277583 | MS.gene63797:intron | 55.0% | |
| ACTGAAGGGCAGACGACAGT+GGG | + | chr5.3:75276929-75276948 | None:intergenic | 55.0% | |
| AGCTTTGCCCTGGGATTGCA+GGG | + | chr5.3:75274050-75274069 | None:intergenic | 55.0% | |
| ATGGCAAAGAGTGAGGGGTG+AGG | + | chr5.3:75274196-75274215 | None:intergenic | 55.0% | |
| CAACTACTGAACCACCACCG+TGG | - | chr5.3:75274966-75274985 | MS.gene63797:intron | 55.0% | |
| CACGCATGGCAAAGAGTGAG+GGG | + | chr5.3:75274201-75274220 | None:intergenic | 55.0% | |
| GGAGATGTCTCTGGTACAGC+AGG | - | chr5.3:75277652-75277671 | MS.gene63797:CDS | 55.0% | |
| GGCAAGTGCTCTGCACAATG+TGG | - | chr5.3:75277709-75277728 | MS.gene63797:CDS | 55.0% | |
| GGCATGACCGATTAGGGTAG+AGG | + | chr5.3:75276341-75276360 | None:intergenic | 55.0% | |
| GTCGGAGTTCCGATCACTGA+TGG | - | chr5.3:75272940-75272959 | MS.gene63797:CDS | 55.0% | |
| GTTGGGTTCATTCGCCATGG+TGG | + | chr5.3:75276853-75276872 | None:intergenic | 55.0% | |
| GTTTGACGAACATGGGGAGG+AGG | + | chr5.3:75276462-75276481 | None:intergenic | 55.0% | |
| TACTGAAGGGCAGACGACAG+TGG | + | chr5.3:75276930-75276949 | None:intergenic | 55.0% | |
| TCCCAGCTGGCAATCAGCTA+AGG | - | chr5.3:75275943-75275962 | MS.gene63797:intron | 55.0% | |
| TCTCTGCAGAGCTTTGCCCT+GGG | + | chr5.3:75274059-75274078 | None:intergenic | 55.0% | |
| TTCTCTGCAGAGCTTTGCCC+TGG | + | chr5.3:75274060-75274079 | None:intergenic | 55.0% | |
| ! | CACGGTGGTGGTTCAGTAGT+TGG | + | chr5.3:75274968-75274987 | None:intergenic | 55.0% |
| ! | CATTCGCCATGGTGGCCTTT+TGG | + | chr5.3:75276845-75276864 | None:intergenic | 55.0% |
| ! | GAGCCTGGCGATTTTCTGAG+AGG | + | chr5.3:75273101-75273120 | None:intergenic | 55.0% |
| !! | TTGTTGATTCGGCGGTGCAG+TGG | + | chr5.3:75272999-75273018 | None:intergenic | 55.0% |
| AAGAAAATCGGCGGCGGAGG+CGG | - | chr5.3:75272971-75272990 | MS.gene63797:CDS | 60.0% | |
| ACGAACATGGGGAGGAGGGT+TGG | + | chr5.3:75276457-75276476 | None:intergenic | 60.0% | |
| CTCAAGAAAATCGGCGGCGG+AGG | - | chr5.3:75272968-75272987 | MS.gene63797:CDS | 60.0% | |
| GAGCTTTGCCCTGGGATTGC+AGG | + | chr5.3:75274051-75274070 | None:intergenic | 60.0% | |
| GCTTTGCCCTGGGATTGCAG+GGG | + | chr5.3:75274049-75274068 | None:intergenic | 60.0% | |
| GGAACTCCGACGTGCGATCG+CGG | + | chr5.3:75272931-75272950 | None:intergenic | 65.0% | |
| !! | CATGGGGAGGAGGGTTGGCT+TGG | + | chr5.3:75276452-75276471 | None:intergenic | 65.0% |
| !! | GGGAGGAGGGTTGGCTTGGC+TGG | + | chr5.3:75276448-75276467 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 75272914 | 75277841 | 75272914 | ID=MS.gene63797 |
| chr5.3 | mRNA | 75272914 | 75277841 | 75272914 | ID=MS.gene63797.t1;Parent=MS.gene63797 |
| chr5.3 | exon | 75277628 | 75277841 | 75277628 | ID=MS.gene63797.t1.exon1;Parent=MS.gene63797.t1 |
| chr5.3 | CDS | 75277628 | 75277841 | 75277628 | ID=cds.MS.gene63797.t1;Parent=MS.gene63797.t1 |
| chr5.3 | exon | 75277190 | 75277440 | 75277190 | ID=MS.gene63797.t1.exon2;Parent=MS.gene63797.t1 |
| chr5.3 | CDS | 75277190 | 75277440 | 75277190 | ID=cds.MS.gene63797.t1;Parent=MS.gene63797.t1 |
| chr5.3 | exon | 75275717 | 75275856 | 75275717 | ID=MS.gene63797.t1.exon3;Parent=MS.gene63797.t1 |
| chr5.3 | CDS | 75275717 | 75275856 | 75275717 | ID=cds.MS.gene63797.t1;Parent=MS.gene63797.t1 |
| chr5.3 | exon | 75274791 | 75274829 | 75274791 | ID=MS.gene63797.t1.exon4;Parent=MS.gene63797.t1 |
| chr5.3 | CDS | 75274791 | 75274829 | 75274791 | ID=cds.MS.gene63797.t1;Parent=MS.gene63797.t1 |
| chr5.3 | exon | 75272914 | 75273142 | 75272914 | ID=MS.gene63797.t1.exon5;Parent=MS.gene63797.t1 |
| chr5.3 | CDS | 75272914 | 75273142 | 75272914 | ID=cds.MS.gene63797.t1;Parent=MS.gene63797.t1 |
| Gene Sequence |
| Protein sequence |
