Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63917.t1 | AET00734.1 | 85.1 | 281 | 35 | 1 | 1 | 281 | 1 | 274 | 2.00E-130 | 475.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63917.t1 | G7K4L8 | 85.1 | 281 | 35 | 1 | 1 | 281 | 1 | 274 | 1.4e-130 | 475.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051719 | MS.gene63917 | 0.800651 | 1.30E-48 | -1.69E-46 |
| MS.gene055056 | MS.gene63917 | 0.812555 | 4.00E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene63917.t1 | MTR_5g095330 | 85.053 | 281 | 35 | 1 | 1 | 281 | 1 | 274 | 4.63e-178 | 492 |
| MS.gene63917.t1 | MTR_5g095400 | 76.157 | 281 | 61 | 1 | 1 | 281 | 265 | 539 | 2.18e-154 | 442 |
| MS.gene63917.t1 | MTR_5g095430 | 72.598 | 281 | 71 | 1 | 1 | 281 | 256 | 530 | 5.02e-147 | 423 |
| MS.gene63917.t1 | MTR_8g009850 | 67.719 | 285 | 55 | 1 | 1 | 285 | 132 | 379 | 2.04e-128 | 370 |
| MS.gene63917.t1 | MTR_5g095310 | 93.333 | 165 | 11 | 0 | 83 | 247 | 198 | 362 | 7.68e-112 | 327 |
| MS.gene63917.t1 | MTR_5g095270 | 74.432 | 176 | 45 | 0 | 77 | 252 | 2 | 177 | 2.64e-92 | 271 |
| MS.gene63917.t1 | MTR_4g027155 | 33.462 | 260 | 145 | 9 | 1 | 254 | 1 | 238 | 9.33e-33 | 124 |
| MS.gene63917.t1 | MTR_1g044605 | 32.922 | 243 | 141 | 8 | 32 | 266 | 33 | 261 | 1.09e-31 | 122 |
| MS.gene63917.t1 | MTR_6g088860 | 35.204 | 196 | 108 | 5 | 77 | 266 | 4 | 186 | 6.19e-31 | 116 |
| MS.gene63917.t1 | MTR_6g466450 | 35.204 | 196 | 108 | 5 | 77 | 266 | 4 | 186 | 6.19e-31 | 116 |
| MS.gene63917.t1 | MTR_8g056180 | 35.714 | 196 | 107 | 5 | 77 | 266 | 4 | 186 | 2.79e-29 | 114 |
| MS.gene63917.t1 | MTR_6g033460 | 28.956 | 297 | 183 | 10 | 3 | 282 | 8 | 293 | 7.57e-26 | 106 |
| MS.gene63917.t1 | MTR_6g023550 | 31.000 | 200 | 121 | 4 | 41 | 239 | 137 | 320 | 2.92e-24 | 100 |
| MS.gene63917.t1 | MTR_5g079810 | 35.870 | 184 | 96 | 6 | 77 | 256 | 4 | 169 | 1.90e-23 | 98.2 |
| MS.gene63917.t1 | MTR_7g070630 | 34.123 | 211 | 112 | 6 | 56 | 256 | 54 | 247 | 5.20e-23 | 98.2 |
| MS.gene63917.t1 | MTR_8g469580 | 27.753 | 227 | 144 | 7 | 57 | 276 | 75 | 288 | 2.60e-22 | 96.3 |
| MS.gene63917.t1 | MTR_0126s0010 | 32.258 | 155 | 95 | 3 | 125 | 276 | 19 | 166 | 1.18e-21 | 92.8 |
| MS.gene63917.t1 | MTR_5g039510 | 29.108 | 213 | 131 | 6 | 66 | 272 | 39 | 237 | 4.55e-20 | 89.7 |
| MS.gene63917.t1 | MTR_6g463930 | 25.969 | 258 | 169 | 8 | 25 | 276 | 36 | 277 | 4.03e-19 | 87.0 |
| MS.gene63917.t1 | MTR_3g080720 | 29.386 | 228 | 117 | 9 | 40 | 256 | 51 | 245 | 7.84e-19 | 86.3 |
| MS.gene63917.t1 | MTR_6g065960 | 34.586 | 133 | 80 | 2 | 111 | 240 | 71 | 199 | 3.95e-16 | 77.4 |
| MS.gene63917.t1 | MTR_5g454250 | 28.761 | 226 | 143 | 7 | 18 | 233 | 164 | 381 | 2.87e-15 | 75.9 |
| MS.gene63917.t1 | MTR_3g455890 | 30.151 | 199 | 93 | 6 | 63 | 256 | 83 | 240 | 3.38e-15 | 75.5 |
| MS.gene63917.t1 | MTR_5g039515 | 28.652 | 178 | 112 | 5 | 83 | 256 | 1 | 167 | 5.04e-14 | 71.6 |
| MS.gene63917.t1 | MTR_3g030280 | 28.070 | 285 | 179 | 11 | 5 | 271 | 15 | 291 | 6.04e-14 | 72.0 |
| MS.gene63917.t1 | MTR_2g009940 | 27.622 | 286 | 179 | 11 | 5 | 271 | 94 | 370 | 1.13e-13 | 71.2 |
| MS.gene63917.t1 | MTR_7g024810 | 27.574 | 272 | 173 | 9 | 5 | 260 | 117 | 380 | 1.58e-13 | 70.9 |
| MS.gene63917.t1 | MTR_2g083020 | 27.368 | 285 | 181 | 10 | 5 | 271 | 288 | 564 | 1.61e-13 | 70.9 |
| MS.gene63917.t1 | MTR_6g014585 | 27.574 | 272 | 173 | 10 | 5 | 260 | 43 | 306 | 1.71e-12 | 67.8 |
| MS.gene63917.t1 | MTR_6g012930 | 26.838 | 272 | 175 | 9 | 5 | 260 | 65 | 328 | 6.63e-12 | 65.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 67 sgRNAs with CRISPR-Local
Find 83 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTCTTTGCAAATGCATATC+TGG | 0.205513 | 5.1:-76196364 | MS.gene63917:CDS |
| AGAGCACTATTCGAAGTTTC+TGG | 0.226886 | 5.1:-76196526 | MS.gene63917:CDS |
| AAAATTATCAATGGATTGTT+TGG | 0.246344 | 5.1:-76196255 | MS.gene63917:CDS |
| TTATAGTTCCCATCTTCTTT+AGG | 0.261328 | 5.1:+76196336 | None:intergenic |
| TTATGTCATTTAAGTTATAA+TGG | 0.279777 | 5.1:+76195771 | None:intergenic |
| GTACAAATTCTCAGATATTC+AGG | 0.317285 | 5.1:-76196460 | MS.gene63917:CDS |
| CATTGACTGGTTCGCCCTTA+AGG | 0.319854 | 5.1:+76195974 | None:intergenic |
| CTTCCTAACCCAATCGGCCT+CGG | 0.330220 | 5.1:+76196140 | None:intergenic |
| CTTGATAACTGCAATCCTTA+AGG | 0.357132 | 5.1:-76195989 | MS.gene63917:CDS |
| GTCTCCTAGCAAATGACCTT+CGG | 0.357217 | 5.1:-76195945 | MS.gene63917:CDS |
| GTGCAGGCCCGAGGCCGATT+GGG | 0.381424 | 5.1:-76196148 | MS.gene63917:CDS |
| TGTGCAGGCCCGAGGCCGAT+TGG | 0.385248 | 5.1:-76196149 | MS.gene63917:CDS |
| CTCGACCAGTCACCGTGAAA+TGG | 0.393842 | 5.1:-76195807 | MS.gene63917:CDS |
| AAATTATCAATGGATTGTTT+GGG | 0.400666 | 5.1:-76196254 | MS.gene63917:CDS |
| TTGATAACTGCAATCCTTAA+GGG | 0.407477 | 5.1:-76195988 | MS.gene63917:CDS |
| GGGATCTAACATTGATCATC+AGG | 0.407482 | 5.1:-76196187 | MS.gene63917:CDS |
| TCTATCCATTTCACGGTGAC+TGG | 0.413765 | 5.1:+76195802 | None:intergenic |
| ATCTTTCTTCCTAACCCAAT+CGG | 0.420963 | 5.1:+76196134 | None:intergenic |
| TCTCCTAGCAAATGACCTTC+GGG | 0.429048 | 5.1:-76195944 | MS.gene63917:CDS |
| CTTAAGGATTGCAGTTATCA+AGG | 0.437445 | 5.1:+76195990 | None:intergenic |
| GGCCCGAGGCCGATTGGGTT+AGG | 0.439711 | 5.1:-76196143 | MS.gene63917:CDS |
| TTTCATGAGAAAATTATCAA+TGG | 0.445312 | 5.1:-76196264 | MS.gene63917:CDS |
| ATGATCAATGTTAGATCCCT+TGG | 0.447829 | 5.1:+76196191 | None:intergenic |
| TTCCTAACCCAATCGGCCTC+GGG | 0.448443 | 5.1:+76196141 | None:intergenic |
| AGAATTTGTACCCTTCCAAC+TGG | 0.450224 | 5.1:+76196472 | None:intergenic |
| CTGGGTCCTCCTAAAGAAGA+TGG | 0.457044 | 5.1:-76196345 | MS.gene63917:CDS |
| ACTTCGAATAGTGCTCTTGA+TGG | 0.457825 | 5.1:+76196532 | None:intergenic |
| AGGAGACGACCGACATTGAC+TGG | 0.468047 | 5.1:+76195961 | None:intergenic |
| GTGTTCATTTGAAGCAAGAA+AGG | 0.479787 | 5.1:-76196214 | MS.gene63917:CDS |
| TTATCAAGGTTGCTTTCTGA+AGG | 0.485245 | 5.1:+76196004 | None:intergenic |
| GATCAACAAGCTTTGTGAAA+GGG | 0.494192 | 5.1:-76195872 | MS.gene63917:CDS |
| TCTGACAACATTTGCAAAAG+AGG | 0.496897 | 5.1:-76196409 | MS.gene63917:CDS |
| TTCTTTGCAAATGCATATCT+GGG | 0.497315 | 5.1:-76196363 | MS.gene63917:CDS |
| TAGTTCCCATCTTCTTTAGG+AGG | 0.502708 | 5.1:+76196339 | None:intergenic |
| ACAAGCTTTGTGAAAGGGTG+AGG | 0.511043 | 5.1:-76195867 | MS.gene63917:CDS |
| ATGATAGTGACCAGAGGATG+GGG | 0.517665 | 5.1:-76196435 | MS.gene63917:CDS |
| CAATGATAGTGACCAGAGGA+TGG | 0.529533 | 5.1:-76196437 | MS.gene63917:CDS |
| ATCAAGGTTGCTTTCTGAAG+GGG | 0.531107 | 5.1:+76196006 | None:intergenic |
| ATTTGAAGCAAGAAAGGCCA+AGG | 0.533782 | 5.1:-76196208 | MS.gene63917:CDS |
| GCATGGTTTATGTAGCTTGT+GGG | 0.546630 | 5.1:+76195901 | None:intergenic |
| TTCACGGTGACTGGTCGAGA+TGG | 0.548396 | 5.1:+76195811 | None:intergenic |
| AATGATAGTGACCAGAGGAT+GGG | 0.548642 | 5.1:-76196436 | MS.gene63917:CDS |
| AGATTCTTAGTACTCTGTGC+AGG | 0.562380 | 5.1:-76196164 | MS.gene63917:CDS |
| TGATCAACAAGCTTTGTGAA+AGG | 0.564096 | 5.1:-76195873 | MS.gene63917:CDS |
| AACAGTTCGCTGTGGCCCGA+AGG | 0.565934 | 5.1:+76195929 | None:intergenic |
| TATCAAGGTTGCTTTCTGAA+GGG | 0.569374 | 5.1:+76196005 | None:intergenic |
| TAGTACTCTGTGCAGGCCCG+AGG | 0.571519 | 5.1:-76196157 | MS.gene63917:CDS |
| TGGCCCGAAGGTCATTTGCT+AGG | 0.575481 | 5.1:+76195941 | None:intergenic |
| GATTGGGTTAGGAAGAAAGA+TGG | 0.578358 | 5.1:-76196132 | MS.gene63917:CDS |
| TGGGTCCTCCTAAAGAAGAT+GGG | 0.581164 | 5.1:-76196344 | MS.gene63917:CDS |
| CACATTTGAACACGGAAGCA+AGG | 0.582698 | 5.1:+76196038 | None:intergenic |
| GACACCCACTGCTAAAGCAT+GGG | 0.587553 | 5.1:-76196079 | MS.gene63917:CDS |
| TGACACCCACTGCTAAAGCA+TGG | 0.587946 | 5.1:-76196080 | MS.gene63917:CDS |
| GGAACTAGATGAGACGTTGG+TGG | 0.604691 | 5.1:+76196584 | None:intergenic |
| GCTTGTTGATCAATGATGCA+TGG | 0.616686 | 5.1:+76195884 | None:intergenic |
| TGCATGGTTTATGTAGCTTG+TGG | 0.616762 | 5.1:+76195900 | None:intergenic |
| GGTGTACCCTGAAAAGAATG+AGG | 0.620543 | 5.1:-76195845 | MS.gene63917:CDS |
| GTTGCCCATGCTTTAGCAGT+GGG | 0.624509 | 5.1:+76196075 | None:intergenic |
| CAAGCTTTGTGAAAGGGTGA+GGG | 0.624867 | 5.1:-76195866 | MS.gene63917:CDS |
| TGTTGCCCATGCTTTAGCAG+TGG | 0.654029 | 5.1:+76196074 | None:intergenic |
| TTTGAAGCAAGAAAGGCCAA+GGG | 0.664841 | 5.1:-76196207 | MS.gene63917:CDS |
| AAGGGCGAACCAGTCAATGT+CGG | 0.684633 | 5.1:-76195970 | MS.gene63917:CDS |
| AAAGGAACTAGATGAGACGT+TGG | 0.686332 | 5.1:+76196581 | None:intergenic |
| TGATAGTGACCAGAGGATGG+GGG | 0.689252 | 5.1:-76196434 | MS.gene63917:CDS |
| AAGTCTGACACATTTGAACA+CGG | 0.704591 | 5.1:+76196030 | None:intergenic |
| CAGGCAATGATAGTGACCAG+AGG | 0.712647 | 5.1:-76196441 | MS.gene63917:CDS |
| GGGAGAAGAACAGTTCGCTG+TGG | 0.729789 | 5.1:+76195921 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAACAAAGCAAAGATAAAAA+AGG | - | chr5.1:76195791-76195810 | MS.gene63917:CDS | 20.0% |
| !! | TTTCATGAGAAAATTATCAA+TGG | - | chr5.1:76196137-76196156 | MS.gene63917:CDS | 20.0% |
| !!! | AAAATTATCAATGGATTGTT+TGG | - | chr5.1:76196146-76196165 | MS.gene63917:CDS | 20.0% |
| !!! | AAATTATCAATGGATTGTTT+GGG | - | chr5.1:76196147-76196166 | MS.gene63917:CDS | 20.0% |
| !!! | TTGATAATTTTCTCATGAAA+TGG | + | chr5.1:76196137-76196156 | None:intergenic | 20.0% |
| !!! | TTTTTATCTTTGCTTTGTTT+TGG | + | chr5.1:76195791-76195810 | None:intergenic | 20.0% |
| ! | AAAAAAATTTCCAGTTGGAA+GGG | - | chr5.1:76195919-76195938 | MS.gene63917:CDS | 25.0% |
| ! | GTTAGAAAAAAATTTCCAGT+TGG | - | chr5.1:76195914-76195933 | MS.gene63917:CDS | 25.0% |
| ! | TATGAAGTGAAAAATGTCAA+AGG | + | chr5.1:76195841-76195860 | None:intergenic | 25.0% |
| !! | CATTTTTCACTTCATATCAT+TGG | - | chr5.1:76195845-76195864 | MS.gene63917:CDS | 25.0% |
| !! | TTCTAACACAAACTTTTTGT+TGG | + | chr5.1:76195901-76195920 | None:intergenic | 25.0% |
| !!! | TCAGAAGAGTTAAGTTTTAT+TGG | + | chr5.1:76196299-76196318 | None:intergenic | 25.0% |
| !!! | TGTTTTTTCTATCCATTTCA+CGG | + | chr5.1:76196609-76196628 | None:intergenic | 25.0% |
| GAAAAAAATTTCCAGTTGGA+AGG | - | chr5.1:76195918-76195937 | MS.gene63917:CDS | 30.0% | |
| GTACAAATTCTCAGATATTC+AGG | - | chr5.1:76195941-76195960 | MS.gene63917:CDS | 30.0% | |
| TTATAGTTCCCATCTTCTTT+AGG | + | chr5.1:76196068-76196087 | None:intergenic | 30.0% | |
| TTCTTTGCAAATGCATATCT+GGG | - | chr5.1:76196038-76196057 | MS.gene63917:CDS | 30.0% | |
| ! | ACAATTTCCTCATTCTTTTC+AGG | + | chr5.1:76196566-76196585 | None:intergenic | 30.0% |
| ! | CAATTTCCTCATTCTTTTCA+GGG | + | chr5.1:76196565-76196584 | None:intergenic | 30.0% |
| ! | TTGATAACTGCAATCCTTAA+GGG | - | chr5.1:76196413-76196432 | MS.gene63917:CDS | 30.0% |
| !!! | AAATTCACTAGTTTTGTGAG+AGG | - | chr5.1:76196101-76196120 | MS.gene63917:CDS | 30.0% |
| !!! | AATTCACTAGTTTTGTGAGA+GGG | - | chr5.1:76196102-76196121 | MS.gene63917:CDS | 30.0% |
| AAGTCTGACACATTTGAACA+CGG | + | chr5.1:76196374-76196393 | None:intergenic | 35.0% | |
| ATCTTTCTTCCTAACCCAAT+CGG | + | chr5.1:76196270-76196289 | None:intergenic | 35.0% | |
| ATGATCAATGTTAGATCCCT+TGG | + | chr5.1:76196213-76196232 | None:intergenic | 35.0% | |
| CTTAAGGATTGCAGTTATCA+AGG | + | chr5.1:76196414-76196433 | None:intergenic | 35.0% | |
| GTTCTTTGCAAATGCATATC+TGG | - | chr5.1:76196037-76196056 | MS.gene63917:CDS | 35.0% | |
| TCTGACAACATTTGCAAAAG+AGG | - | chr5.1:76195992-76196011 | MS.gene63917:CDS | 35.0% | |
| ! | CTTGATAACTGCAATCCTTA+AGG | - | chr5.1:76196412-76196431 | MS.gene63917:CDS | 35.0% |
| ! | GATCAACAAGCTTTGTGAAA+GGG | - | chr5.1:76196529-76196548 | MS.gene63917:CDS | 35.0% |
| ! | GTGTTCATTTGAAGCAAGAA+AGG | - | chr5.1:76196187-76196206 | MS.gene63917:CDS | 35.0% |
| ! | TATCAAGGTTGCTTTCTGAA+GGG | + | chr5.1:76196399-76196418 | None:intergenic | 35.0% |
| ! | TGATCAACAAGCTTTGTGAA+AGG | - | chr5.1:76196528-76196547 | MS.gene63917:CDS | 35.0% |
| ! | TTATCAAGGTTGCTTTCTGA+AGG | + | chr5.1:76196400-76196419 | None:intergenic | 35.0% |
| AAAGGAACTAGATGAGACGT+TGG | + | chr5.1:76195823-76195842 | None:intergenic | 40.0% | |
| ACTTCGAATAGTGCTCTTGA+TGG | + | chr5.1:76195872-76195891 | None:intergenic | 40.0% | |
| AGAATTTGTACCCTTCCAAC+TGG | + | chr5.1:76195932-76195951 | None:intergenic | 40.0% | |
| AGATTCTTAGTACTCTGTGC+AGG | - | chr5.1:76196237-76196256 | MS.gene63917:CDS | 40.0% | |
| GGGATCTAACATTGATCATC+AGG | - | chr5.1:76196214-76196233 | MS.gene63917:CDS | 40.0% | |
| TAGTTCCCATCTTCTTTAGG+AGG | + | chr5.1:76196065-76196084 | None:intergenic | 40.0% | |
| TGCATGGTTTATGTAGCTTG+TGG | + | chr5.1:76196504-76196523 | None:intergenic | 40.0% | |
| ! | AATGATAGTGACCAGAGGAT+GGG | - | chr5.1:76195965-76195984 | MS.gene63917:CDS | 40.0% |
| ! | AGAGCACTATTCGAAGTTTC+TGG | - | chr5.1:76195875-76195894 | MS.gene63917:CDS | 40.0% |
| ! | ATCAAGGTTGCTTTCTGAAG+GGG | + | chr5.1:76196398-76196417 | None:intergenic | 40.0% |
| ! | ATTTGAAGCAAGAAAGGCCA+AGG | - | chr5.1:76196193-76196212 | MS.gene63917:CDS | 40.0% |
| ! | GATTGGGTTAGGAAGAAAGA+TGG | - | chr5.1:76196269-76196288 | MS.gene63917:CDS | 40.0% |
| ! | GCATGGTTTATGTAGCTTGT+GGG | + | chr5.1:76196503-76196522 | None:intergenic | 40.0% |
| ! | GCTTGTTGATCAATGATGCA+TGG | + | chr5.1:76196520-76196539 | None:intergenic | 40.0% |
| ! | TTTGAAGCAAGAAAGGCCAA+GGG | - | chr5.1:76196194-76196213 | MS.gene63917:CDS | 40.0% |
| !!! | TAGTTTTGTGAGAGGGAAGA+AGG | - | chr5.1:76196109-76196128 | MS.gene63917:CDS | 40.0% |
| CACATTTGAACACGGAAGCA+AGG | + | chr5.1:76196366-76196385 | None:intergenic | 45.0% | |
| GGTGTACCCTGAAAAGAATG+AGG | - | chr5.1:76196556-76196575 | MS.gene63917:CDS | 45.0% | |
| GTCTCCTAGCAAATGACCTT+CGG | - | chr5.1:76196456-76196475 | MS.gene63917:CDS | 45.0% | |
| TCTATCCATTTCACGGTGAC+TGG | + | chr5.1:76196602-76196621 | None:intergenic | 45.0% | |
| TCTCCTAGCAAATGACCTTC+GGG | - | chr5.1:76196457-76196476 | MS.gene63917:CDS | 45.0% | |
| TGGGTCCTCCTAAAGAAGAT+GGG | - | chr5.1:76196057-76196076 | MS.gene63917:CDS | 45.0% | |
| ! | ACAAGCTTTGTGAAAGGGTG+AGG | - | chr5.1:76196534-76196553 | MS.gene63917:CDS | 45.0% |
| ! | ATGATAGTGACCAGAGGATG+GGG | - | chr5.1:76195966-76195985 | MS.gene63917:CDS | 45.0% |
| ! | CAAGCTTTGTGAAAGGGTGA+GGG | - | chr5.1:76196535-76196554 | MS.gene63917:CDS | 45.0% |
| ! | CAATGATAGTGACCAGAGGA+TGG | - | chr5.1:76195964-76195983 | MS.gene63917:CDS | 45.0% |
| AAGGGCGAACCAGTCAATGT+CGG | - | chr5.1:76196431-76196450 | MS.gene63917:CDS | 50.0% | |
| CTGGGTCCTCCTAAAGAAGA+TGG | - | chr5.1:76196056-76196075 | MS.gene63917:CDS | 50.0% | |
| GACACCCACTGCTAAAGCAT+GGG | - | chr5.1:76196322-76196341 | MS.gene63917:CDS | 50.0% | |
| GGAACTAGATGAGACGTTGG+TGG | + | chr5.1:76195820-76195839 | None:intergenic | 50.0% | |
| GTTGCCCATGCTTTAGCAGT+GGG | + | chr5.1:76196329-76196348 | None:intergenic | 50.0% | |
| TGACACCCACTGCTAAAGCA+TGG | - | chr5.1:76196321-76196340 | MS.gene63917:CDS | 50.0% | |
| TGTTGCCCATGCTTTAGCAG+TGG | + | chr5.1:76196330-76196349 | None:intergenic | 50.0% | |
| ! | CAGGCAATGATAGTGACCAG+AGG | - | chr5.1:76195960-76195979 | MS.gene63917:CDS | 50.0% |
| ! | TGATAGTGACCAGAGGATGG+GGG | - | chr5.1:76195967-76195986 | MS.gene63917:CDS | 50.0% |
| !! | CATTGACTGGTTCGCCCTTA+AGG | + | chr5.1:76196430-76196449 | None:intergenic | 50.0% |
| AGGAGACGACCGACATTGAC+TGG | + | chr5.1:76196443-76196462 | None:intergenic | 55.0% | |
| CTCGACCAGTCACCGTGAAA+TGG | - | chr5.1:76196594-76196613 | MS.gene63917:CDS | 55.0% | |
| CTTCCTAACCCAATCGGCCT+CGG | + | chr5.1:76196264-76196283 | None:intergenic | 55.0% | |
| GGGAGAAGAACAGTTCGCTG+TGG | + | chr5.1:76196483-76196502 | None:intergenic | 55.0% | |
| TGGCCCGAAGGTCATTTGCT+AGG | + | chr5.1:76196463-76196482 | None:intergenic | 55.0% | |
| TTCCTAACCCAATCGGCCTC+GGG | + | chr5.1:76196263-76196282 | None:intergenic | 55.0% | |
| ! | TTCACGGTGACTGGTCGAGA+TGG | + | chr5.1:76196593-76196612 | None:intergenic | 55.0% |
| AACAGTTCGCTGTGGCCCGA+AGG | + | chr5.1:76196475-76196494 | None:intergenic | 60.0% | |
| TAGTACTCTGTGCAGGCCCG+AGG | - | chr5.1:76196244-76196263 | MS.gene63917:CDS | 60.0% | |
| TGTCAGATGCCCCCATCCTC+TGG | + | chr5.1:76195979-76195998 | None:intergenic | 60.0% | |
| GGCCCGAGGCCGATTGGGTT+AGG | - | chr5.1:76196258-76196277 | MS.gene63917:CDS | 70.0% | |
| GTGCAGGCCCGAGGCCGATT+GGG | - | chr5.1:76196253-76196272 | MS.gene63917:CDS | 70.0% | |
| TGTGCAGGCCCGAGGCCGAT+TGG | - | chr5.1:76196252-76196271 | MS.gene63917:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 76195780 | 76196643 | 76195780 | ID=MS.gene63917 |
| chr5.1 | mRNA | 76195780 | 76196643 | 76195780 | ID=MS.gene63917.t1;Parent=MS.gene63917 |
| chr5.1 | exon | 76195780 | 76196643 | 76195780 | ID=MS.gene63917.t1.exon1;Parent=MS.gene63917.t1 |
| chr5.1 | CDS | 76195780 | 76196643 | 76195780 | ID=cds.MS.gene63917.t1;Parent=MS.gene63917.t1 |
| Gene Sequence |
| Protein sequence |
