Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055056.t1 | XP_024630021.1 | 88.1 | 327 | 39 | 0 | 123 | 449 | 4 | 330 | 1.20E-99 | 374.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055056.t1 | A0A396JAP9 | 88.1 | 327 | 39 | 0 | 123 | 449 | 4 | 330 | 8.4e-100 | 374.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049262 | MS.gene055056 | 0.807078 | 6.02E-50 | -1.69E-46 |
| MS.gene055056 | MS.gene058515 | 0.821437 | 4.04E-53 | -1.69E-46 |
| MS.gene055056 | MS.gene059276 | 0.821132 | 4.75E-53 | -1.69E-46 |
| MS.gene055056 | MS.gene061490 | 0.809483 | 1.85E-50 | -1.69E-46 |
| MS.gene055056 | MS.gene06269 | 0.809083 | 2.25E-50 | -1.69E-46 |
| MS.gene055056 | MS.gene063846 | 0.844945 | 5.52E-59 | -1.69E-46 |
| MS.gene055056 | MS.gene064075 | 0.800047 | 1.73E-48 | -1.69E-46 |
| MS.gene055056 | MS.gene064718 | 0.800198 | 1.61E-48 | -1.69E-46 |
| MS.gene055056 | MS.gene06633 | 0.804049 | 2.60E-49 | -1.69E-46 |
| MS.gene055056 | MS.gene066752 | 0.842774 | 2.11E-58 | -1.69E-46 |
| MS.gene055056 | MS.gene068308 | 0.806197 | 9.25E-50 | -1.69E-46 |
| MS.gene055056 | MS.gene068403 | 0.824545 | 7.62E-54 | -1.69E-46 |
| MS.gene055056 | MS.gene069275 | 0.815145 | 1.07E-51 | -1.69E-46 |
| MS.gene055056 | MS.gene070466 | 0.813115 | 3.01E-51 | -1.69E-46 |
| MS.gene055056 | MS.gene070467 | 0.818715 | 1.70E-52 | -1.69E-46 |
| MS.gene055056 | MS.gene071330 | 0.822038 | 2.93E-53 | -1.69E-46 |
| MS.gene055056 | MS.gene071551 | 0.810901 | 9.15E-51 | -1.69E-46 |
| MS.gene055056 | MS.gene072067 | 0.805076 | 1.59E-49 | -1.69E-46 |
| MS.gene055056 | MS.gene072915 | 0.805848 | 1.09E-49 | -1.69E-46 |
| MS.gene055056 | MS.gene07991 | 0.80062 | 1.32E-48 | -1.69E-46 |
| MS.gene055056 | MS.gene09504 | 0.854154 | 1.49E-61 | -1.69E-46 |
| MS.gene055056 | MS.gene20657 | 0.818585 | 1.81E-52 | -1.69E-46 |
| MS.gene055056 | MS.gene24211 | 0.84053 | 8.23E-58 | -1.69E-46 |
| MS.gene055056 | MS.gene26056 | 0.830966 | 2.18E-55 | -1.69E-46 |
| MS.gene055056 | MS.gene27720 | 0.801404 | 9.15E-49 | -1.69E-46 |
| MS.gene055056 | MS.gene28203 | 0.819393 | 1.19E-52 | -1.69E-46 |
| MS.gene055056 | MS.gene30073 | 0.826538 | 2.57E-54 | -1.69E-46 |
| MS.gene055056 | MS.gene30580 | 0.806234 | 9.08E-50 | -1.69E-46 |
| MS.gene055056 | MS.gene33228 | 0.813048 | 3.12E-51 | -1.69E-46 |
| MS.gene055056 | MS.gene33462 | 0.818366 | 2.04E-52 | -1.69E-46 |
| MS.gene055056 | MS.gene34251 | 0.821211 | 4.55E-53 | -1.69E-46 |
| MS.gene055056 | MS.gene34615 | 0.829066 | 6.34E-55 | -1.69E-46 |
| MS.gene055056 | MS.gene38011 | 0.824131 | 9.53E-54 | -1.69E-46 |
| MS.gene055056 | MS.gene38429 | 0.860097 | 2.62E-63 | -1.69E-46 |
| MS.gene055056 | MS.gene38850 | 0.837524 | 4.94E-57 | -1.69E-46 |
| MS.gene055056 | MS.gene41039 | 0.8008 | 1.22E-48 | -1.69E-46 |
| MS.gene055056 | MS.gene42887 | 0.807579 | 4.72E-50 | -1.69E-46 |
| MS.gene055056 | MS.gene42891 | 0.808639 | 2.81E-50 | -1.69E-46 |
| MS.gene055056 | MS.gene44743 | 0.817912 | 2.58E-52 | -1.69E-46 |
| MS.gene055056 | MS.gene45794 | 0.847519 | 1.10E-59 | -1.69E-46 |
| MS.gene055056 | MS.gene48698 | 0.801665 | 8.09E-49 | -1.69E-46 |
| MS.gene055056 | MS.gene48858 | 0.8128 | 3.53E-51 | -1.69E-46 |
| MS.gene055056 | MS.gene50755 | 0.815645 | 8.31E-52 | -1.69E-46 |
| MS.gene055056 | MS.gene50875 | 0.809376 | 1.95E-50 | -1.69E-46 |
| MS.gene055056 | MS.gene51189 | 0.805841 | 1.10E-49 | -1.69E-46 |
| MS.gene055056 | MS.gene51252 | 0.80507 | 1.59E-49 | -1.69E-46 |
| MS.gene055056 | MS.gene52525 | 0.804173 | 2.45E-49 | -1.69E-46 |
| MS.gene055056 | MS.gene53704 | 0.80075 | 1.25E-48 | -1.69E-46 |
| MS.gene055056 | MS.gene54017 | 0.804114 | 2.52E-49 | -1.69E-46 |
| MS.gene055056 | MS.gene54320 | 0.832756 | 7.88E-56 | -1.69E-46 |
| MS.gene055056 | MS.gene54517 | 0.832792 | 7.72E-56 | -1.69E-46 |
| MS.gene055056 | MS.gene54717 | 0.823627 | 1.25E-53 | -1.69E-46 |
| MS.gene055056 | MS.gene54921 | 0.839073 | 1.97E-57 | -1.69E-46 |
| MS.gene055056 | MS.gene56618 | 0.925087 | 2.95E-90 | -1.69E-46 |
| MS.gene055056 | MS.gene59780 | 0.809077 | 2.26E-50 | -1.69E-46 |
| MS.gene055056 | MS.gene61742 | 0.811938 | 5.45E-51 | -1.69E-46 |
| MS.gene055056 | MS.gene62748 | 0.826264 | 2.99E-54 | -1.69E-46 |
| MS.gene055056 | MS.gene63917 | 0.812555 | 4.00E-51 | -1.69E-46 |
| MS.gene055056 | MS.gene65003 | 0.804401 | 2.20E-49 | -1.69E-46 |
| MS.gene055056 | MS.gene66192 | 0.819952 | 8.86E-53 | -1.69E-46 |
| MS.gene055056 | MS.gene66682 | 0.825634 | 4.21E-54 | -1.69E-46 |
| MS.gene055056 | MS.gene68999 | 0.80642 | 8.30E-50 | -1.69E-46 |
| MS.gene055056 | MS.gene69102 | 0.813453 | 2.54E-51 | -1.69E-46 |
| MS.gene055056 | MS.gene73540 | 0.805106 | 1.57E-49 | -1.69E-46 |
| MS.gene055056 | MS.gene73707 | 0.817385 | 3.39E-52 | -1.69E-46 |
| MS.gene055056 | MS.gene76826 | 0.800659 | 1.30E-48 | -1.69E-46 |
| MS.gene055056 | MS.gene76954 | 0.818499 | 1.90E-52 | -1.69E-46 |
| MS.gene055056 | MS.gene77862 | 0.821315 | 4.31E-53 | -1.69E-46 |
| MS.gene055056 | MS.gene77863 | 0.806079 | 9.79E-50 | -1.69E-46 |
| MS.gene055056 | MS.gene78647 | 0.85741 | 1.66E-62 | -1.69E-46 |
| MS.gene055056 | MS.gene79147 | 0.831453 | 1.66E-55 | -1.69E-46 |
| MS.gene055056 | MS.gene81347 | 0.808687 | 2.74E-50 | -1.69E-46 |
| MS.gene055056 | MS.gene82668 | 0.803041 | 4.21E-49 | -1.69E-46 |
| MS.gene055056 | MS.gene82682 | 0.819301 | 1.25E-52 | -1.69E-46 |
| MS.gene055056 | MS.gene82962 | 0.835087 | 2.06E-56 | -1.69E-46 |
| MS.gene055056 | MS.gene84702 | 0.805123 | 1.55E-49 | -1.69E-46 |
| MS.gene055056 | MS.gene84968 | 0.857278 | 1.82E-62 | -1.69E-46 |
| MS.gene055056 | MS.gene85527 | 0.907753 | 3.60E-81 | -1.69E-46 |
| MS.gene055056 | MS.gene86255 | 0.803076 | 4.14E-49 | -1.69E-46 |
| MS.gene055056 | MS.gene86256 | 0.812562 | 3.98E-51 | -1.69E-46 |
| MS.gene055056 | MS.gene88533 | 0.820166 | 7.92E-53 | -1.69E-46 |
| MS.gene055056 | MS.gene88539 | 0.809597 | 1.75E-50 | -1.69E-46 |
| MS.gene055056 | MS.gene88548 | 0.814069 | 1.86E-51 | -1.69E-46 |
| MS.gene055056 | MS.gene89778 | 0.802011 | 6.87E-49 | -1.69E-46 |
| MS.gene055056 | MS.gene91451 | 0.848539 | 5.75E-60 | -1.69E-46 |
| MS.gene055056 | MS.gene92276 | 0.8436 | 1.27E-58 | -1.69E-46 |
| MS.gene055056 | MS.gene98550 | 0.826309 | 2.91E-54 | -1.69E-46 |
| MS.gene055056 | MS.gene98673 | 0.807914 | 4.01E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055056.t1 | MTR_6g043310 | 89.189 | 148 | 16 | 0 | 548 | 695 | 1 | 148 | 4.85e-92 | 283 |
| MS.gene055056.t1 | MTR_6g088780 | 91.057 | 123 | 11 | 0 | 583 | 705 | 16 | 138 | 6.33e-76 | 240 |
| MS.gene055056.t1 | MTR_5g061300 | 42.642 | 265 | 116 | 4 | 352 | 616 | 47 | 275 | 3.64e-69 | 229 |
| MS.gene055056.t1 | MTR_3g055517 | 31.933 | 119 | 68 | 2 | 581 | 693 | 7 | 118 | 3.92e-15 | 75.1 |
| MS.gene055056.t1 | MTR_7g027580 | 39.796 | 98 | 56 | 1 | 331 | 428 | 66 | 160 | 1.80e-12 | 67.0 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene055056.t1 | AT1G40087 | 27.160 | 243 | 152 | 6 | 385 | 613 | 75 | 306 | 4.26e-17 | 84.3 |
| MS.gene055056.t1 | AT3G30200 | 28.279 | 244 | 149 | 8 | 386 | 613 | 193 | 426 | 8.53e-16 | 81.3 |
Find 124 sgRNAs with CRISPR-Local
Find 198 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAGGAAATTGTTGAAATTT+TGG | 0.050436 | 7.4:-37934597 | MS.gene055056:CDS |
| GTGCTTTAACCTATCCTTTA+AGG | 0.092890 | 7.4:+37934648 | None:intergenic |
| ACATCATCTTGACTTAAATT+TGG | 0.147003 | 7.4:+37933787 | None:intergenic |
| TGCTTCATTTGTGACTTTCT+TGG | 0.192032 | 7.4:+37935740 | None:intergenic |
| TCTGCCATATTCAACCTTAA+AGG | 0.196778 | 7.4:-37934662 | MS.gene055056:CDS |
| TATGCTGAAAATGACAATTT+AGG | 0.221614 | 7.4:-37935441 | MS.gene055056:CDS |
| TGCATTGGGTAGCTCAAATT+TGG | 0.224392 | 7.4:+37936067 | None:intergenic |
| CCCGGTAGAGTTCGTTGTTT+TGG | 0.258619 | 7.4:-37933985 | MS.gene055056:CDS |
| CGAAGAAGACGGTTTGGATA+TGG | 0.266932 | 7.4:+37936461 | None:intergenic |
| GAAGTTATACTTGATGATAT+TGG | 0.283980 | 7.4:-37935010 | MS.gene055056:CDS |
| CTGGAGACTGATTGGAATCT+TGG | 0.297693 | 7.4:+37934043 | None:intergenic |
| CTATCCTTTAAGGTTGAATA+TGG | 0.303500 | 7.4:+37934658 | None:intergenic |
| TCTGACTTGAGTATGTTTCT+TGG | 0.305561 | 7.4:-37934956 | MS.gene055056:CDS |
| AAGTACCAGAACCTCATTTC+AGG | 0.309482 | 7.4:-37934615 | MS.gene055056:CDS |
| TGCTTCATTCGTGACTCTCT+TGG | 0.315016 | 7.4:+37935617 | None:intergenic |
| TGAGGTTCTGGTACTTCTTC+AGG | 0.315196 | 7.4:+37934622 | None:intergenic |
| TTGGATTGAATCCTGAAGTT+TGG | 0.322903 | 7.4:+37934062 | None:intergenic |
| CATGATATTGTTTGGACCCT+TGG | 0.323757 | 7.4:+37935580 | None:intergenic |
| TTCCTCTTGAAGATCATCTT+CGG | 0.326083 | 7.4:+37933077 | None:intergenic |
| TTGTCTTGAGCTTTCAGCTT+TGG | 0.332712 | 7.4:+37936107 | None:intergenic |
| ACTCAATGCTTGAAAATTCA+TGG | 0.333799 | 7.4:-37935055 | MS.gene055056:CDS |
| CAATCCTAAACAAAGGCTTT+TGG | 0.336125 | 7.4:+37935862 | None:intergenic |
| GACAATTGTTGAGTTTCTTA+AGG | 0.337606 | 7.4:-37935310 | MS.gene055056:CDS |
| CTGATTCTGCACAAATCCTT+TGG | 0.339601 | 7.4:+37935530 | None:intergenic |
| AACACCTTTCCTTCCTTTCT+CGG | 0.347137 | 7.4:+37934744 | None:intergenic |
| TTATCGAATTTCACAACAAT+TGG | 0.354676 | 7.4:-37935819 | MS.gene055056:CDS |
| AAACAATATCATGATCAAAT+TGG | 0.357296 | 7.4:-37935570 | MS.gene055056:CDS |
| TTTATGTAAGGCCAAACTTC+AGG | 0.363761 | 7.4:-37934073 | MS.gene055056:intron |
| AATTTGATCATGATATTGTT+TGG | 0.369520 | 7.4:+37935572 | None:intergenic |
| AAAAGGATTTAACCTCAAAC+AGG | 0.379057 | 7.4:-37935794 | MS.gene055056:CDS |
| TTCATAGTGTTTCTTAATGT+TGG | 0.379202 | 7.4:+37933918 | None:intergenic |
| CAAGTGTTTCAGTCTTTGTT+TGG | 0.381670 | 7.4:-37934018 | MS.gene055056:CDS |
| TCCTCTTGAAGATCATCTTC+GGG | 0.382074 | 7.4:+37933078 | None:intergenic |
| ATCCTTTGGTTTGAGTCATA+AGG | 0.385492 | 7.4:+37935544 | None:intergenic |
| GAGTCCAAAAGCCTTTGTTT+AGG | 0.387158 | 7.4:-37935866 | MS.gene055056:CDS |
| TCATTCTTCTTCAACATTGA+CGG | 0.388492 | 7.4:+37933949 | None:intergenic |
| TTCGATAAACATTTCTGCTT+GGG | 0.390840 | 7.4:+37934229 | None:intergenic |
| AGAATCACGGGGAAGATATA+TGG | 0.391268 | 7.4:-37934871 | MS.gene055056:CDS |
| ATCCTTTGATTTGAGTCATA+AGG | 0.394438 | 7.4:+37935667 | None:intergenic |
| TTTCACAACAATTGGTCAAA+AGG | 0.403993 | 7.4:-37935811 | MS.gene055056:CDS |
| GCTTCATTCGTGACTCTCTT+GGG | 0.405013 | 7.4:+37935618 | None:intergenic |
| CGAAATCGAAGAAGACGGTT+TGG | 0.409145 | 7.4:+37936455 | None:intergenic |
| TGCAAGATCAAGCATTGAAT+TGG | 0.409564 | 7.4:-37936048 | MS.gene055056:CDS |
| TGAGTCATAAGGTTGCCTTT+TGG | 0.423799 | 7.4:+37935678 | None:intergenic |
| TACACATTTACTTGGATAGT+AGG | 0.427575 | 7.4:+37934568 | None:intergenic |
| TTCAATGCTTGATCTTGCAT+TGG | 0.428855 | 7.4:+37936052 | None:intergenic |
| CACTTGGTCTGGAGACTGAT+TGG | 0.430299 | 7.4:+37934035 | None:intergenic |
| CTTAAAATTTGTGTAAAGGA+AGG | 0.432309 | 7.4:+37934904 | None:intergenic |
| TTCAACAATTTCCTGAAATG+AGG | 0.433787 | 7.4:+37934604 | None:intergenic |
| AAAGACTGAAACACTTGGTC+TGG | 0.435429 | 7.4:+37934024 | None:intergenic |
| GTGAAATTCGATAATTTGAT+TGG | 0.439197 | 7.4:+37935828 | None:intergenic |
| ACACCTTTCCTTCCTTTCTC+GGG | 0.441204 | 7.4:+37934745 | None:intergenic |
| GAGGAAGGTGGTGAAAATAA+TGG | 0.451804 | 7.4:-37935198 | MS.gene055056:intron |
| TTTCGATAAACATTTCTGCT+TGG | 0.456916 | 7.4:+37934228 | None:intergenic |
| AAATTTATTATTCCCGAGAA+AGG | 0.463753 | 7.4:-37934757 | MS.gene055056:CDS |
| TGGATCAGGACCCCTGTTTG+AGG | 0.469377 | 7.4:+37935782 | None:intergenic |
| TTTCTAGAATCAATGATGCT+TGG | 0.471897 | 7.4:-37934720 | MS.gene055056:CDS |
| AACATGATGGGACATGCTTT+AGG | 0.472552 | 7.4:-37933760 | MS.gene055056:CDS |
| TCAATGCTTGATCTTGCATT+GGG | 0.473260 | 7.4:+37936053 | None:intergenic |
| GGATGAAGACGATGAGGTAA+TGG | 0.474480 | 7.4:-37935388 | MS.gene055056:CDS |
| ACCTGAAAAGCGTGCAAAGA+AGG | 0.475574 | 7.4:-37934270 | MS.gene055056:intron |
| TGAAGAAGATGAAGAAGAGT+TGG | 0.479829 | 7.4:-37935268 | MS.gene055056:CDS |
| AGAAAGTTGTAGAGAATCAC+GGG | 0.479839 | 7.4:-37934883 | MS.gene055056:CDS |
| TCCAAAACAACGAACTCTAC+CGG | 0.480920 | 7.4:+37933984 | None:intergenic |
| AATTTCCTGAAATGAGGTTC+TGG | 0.484383 | 7.4:+37934610 | None:intergenic |
| TTAAAATTTGTGTAAAGGAA+GGG | 0.488829 | 7.4:+37934905 | None:intergenic |
| CAGAAGTTTATACACCGAAT+GGG | 0.492426 | 7.4:-37934418 | MS.gene055056:CDS |
| CATATTCAACCTTAAAGGAT+AGG | 0.494808 | 7.4:-37934657 | MS.gene055056:CDS |
| TTCGATTTCGAAACCATCAC+CGG | 0.497327 | 7.4:-37936442 | MS.gene055056:intron |
| ATCAACCCATGTTCCTGAAA+AGG | 0.497978 | 7.4:-37933704 | MS.gene055056:intron |
| CTTTCTTAAAATTTGTGTAA+AGG | 0.498638 | 7.4:+37934900 | None:intergenic |
| TTGGAAAATGAAGACGAAGA+TGG | 0.502125 | 7.4:-37935249 | MS.gene055056:CDS |
| GACTAGCATGAAGGAGAGGA+TGG | 0.511088 | 7.4:-37933887 | MS.gene055056:CDS |
| AGCGTGCAAAGAAGGATGAC+GGG | 0.511727 | 7.4:-37934262 | MS.gene055056:CDS |
| CGAAGATGGAGAATATGCTA+TGG | 0.521553 | 7.4:-37935235 | MS.gene055056:CDS |
| TGTTTCTTGGCACTGTCGCT+AGG | 0.522775 | 7.4:-37934943 | MS.gene055056:CDS |
| AAGAAAGTTGTAGAGAATCA+CGG | 0.524418 | 7.4:-37934884 | MS.gene055056:CDS |
| CCAAAACAACGAACTCTACC+GGG | 0.527938 | 7.4:+37933985 | None:intergenic |
| GAAGAAGAAAATGAAGAGGA+AGG | 0.533768 | 7.4:-37935213 | MS.gene055056:CDS |
| TTATTATTCCCGAGAAAGGA+AGG | 0.552013 | 7.4:-37934753 | MS.gene055056:CDS |
| GAAACACGTCAACCTCGAAA+AGG | 0.553170 | 7.4:-37934209 | MS.gene055056:CDS |
| GATGATATTGGAGAACCGAT+TGG | 0.553987 | 7.4:-37934998 | MS.gene055056:CDS |
| GCAGAAGTTTATACACCGAA+TGG | 0.554215 | 7.4:-37934419 | MS.gene055056:CDS |
| AACATTAAGAAACACTATGA+AGG | 0.556057 | 7.4:-37933916 | MS.gene055056:CDS |
| TCAAGAACTACCTTTCTCAC+AGG | 0.561203 | 7.4:+37935492 | None:intergenic |
| AAATATGTTGCACAAGTGGT+TGG | 0.568209 | 7.4:-37935978 | MS.gene055056:CDS |
| AATATGTTACTGACCGGTGA+TGG | 0.569734 | 7.4:+37936429 | None:intergenic |
| TATGGAAGAAGAAAATGAAG+AGG | 0.570235 | 7.4:-37935217 | MS.gene055056:CDS |
| AGACAAAACCAAGATCCAAA+AGG | 0.570250 | 7.4:-37935693 | MS.gene055056:CDS |
| AACCTTATGACTCAAATCAA+AGG | 0.573813 | 7.4:-37935669 | MS.gene055056:CDS |
| AAAAGTTGATGAAGAAACAG+AGG | 0.586729 | 7.4:-37934186 | MS.gene055056:CDS |
| GTCATTGACAAAGAAGAGGA+TGG | 0.591962 | 7.4:-37933854 | MS.gene055056:CDS |
| CATTTACTTGGATAGTAGGA+TGG | 0.594484 | 7.4:+37934572 | None:intergenic |
| AAGCGTGCAAAGAAGGATGA+CGG | 0.594491 | 7.4:-37934263 | MS.gene055056:CDS |
| AGATGATGTGGAGAACATGA+TGG | 0.600705 | 7.4:-37933773 | MS.gene055056:CDS |
| CAAACAAAGACTGAAACACT+TGG | 0.600985 | 7.4:+37934019 | None:intergenic |
| AAATTTAAGTCAAGATGATG+TGG | 0.602230 | 7.4:-37933785 | MS.gene055056:CDS |
| GAAGAAAATGAAGAGGAAGG+TGG | 0.612254 | 7.4:-37935210 | MS.gene055056:CDS |
| ACGAGTCATTGACAAAGAAG+AGG | 0.613357 | 7.4:-37933858 | MS.gene055056:CDS |
| GATCAAGCATTGAATTGGCT+AGG | 0.613593 | 7.4:-37936043 | MS.gene055056:CDS |
| TAAAGGATAGGTTAAAGCAC+AGG | 0.618100 | 7.4:-37934645 | MS.gene055056:CDS |
| GATAATTTGATTGGTGCTTG+AGG | 0.618533 | 7.4:+37935837 | None:intergenic |
| GGTTTCGAAATCGAAGAAGA+CGG | 0.619518 | 7.4:+37936450 | None:intergenic |
| AGGTGAAATGACTAGCATGA+AGG | 0.622260 | 7.4:-37933896 | MS.gene055056:CDS |
| GAGAGTCACGAATGAAGCAT+CGG | 0.622267 | 7.4:-37935613 | MS.gene055056:CDS |
| ATTCCCGAGAAAGGAAGGAA+AGG | 0.622274 | 7.4:-37934748 | MS.gene055056:CDS |
| ATTGTCGTTGATTTGCACAA+CGG | 0.623857 | 7.4:+37935327 | None:intergenic |
| AAAGCTGAAAGCTCAAGACA+AGG | 0.629355 | 7.4:-37936105 | MS.gene055056:CDS |
| TTGTTTGGTAAAGAAAAGCC+CGG | 0.632082 | 7.4:-37934003 | MS.gene055056:CDS |
| AAGCTGAAAGCTCAAGACAA+GGG | 0.632393 | 7.4:-37936104 | MS.gene055056:CDS |
| AGAAGTTTATACACCGAATG+GGG | 0.636871 | 7.4:-37934417 | MS.gene055056:CDS |
| AAATGACTAGCATGAAGGAG+AGG | 0.644066 | 7.4:-37933891 | MS.gene055056:CDS |
| AACCTTATGACTCAAACCAA+AGG | 0.646305 | 7.4:-37935546 | MS.gene055056:CDS |
| AAAGGATTTAACCTCAAACA+GGG | 0.648416 | 7.4:-37935793 | MS.gene055056:CDS |
| ACCCGAAGATGATCTTCAAG+AGG | 0.648792 | 7.4:-37933079 | MS.gene055056:CDS |
| CTGAAAGCTCAAGACAAGGG+TGG | 0.651528 | 7.4:-37936101 | MS.gene055056:CDS |
| CATGGGTTGATGCAGACGAA+TGG | 0.653375 | 7.4:+37933716 | None:intergenic |
| TGAGGTGCAATCCTAAACAA+AGG | 0.655266 | 7.4:+37935855 | None:intergenic |
| GATGATGTGGAGAACATGAT+GGG | 0.656752 | 7.4:-37933772 | MS.gene055056:CDS |
| TAATGCTACAAGATTAGACA+AGG | 0.672114 | 7.4:-37935898 | MS.gene055056:CDS |
| TGCAAAGAAGGATGACGGGG+AGG | 0.674888 | 7.4:-37934258 | MS.gene055056:CDS |
| AAGGATTTAACCTCAAACAG+GGG | 0.682844 | 7.4:-37935792 | MS.gene055056:CDS |
| GCGTGCAAAGAAGGATGACG+GGG | 0.710711 | 7.4:-37934261 | MS.gene055056:CDS |
| GAAAGTTGTAGAGAATCACG+GGG | 0.766159 | 7.4:-37934882 | MS.gene055056:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATTGTTTAGTAAAAGAA+TGG | - | chr7.4:37935948-37935967 | MS.gene055056:CDS | 15.0% |
| !! | TATAAGTTTAATATTGGAAT+AGG | - | chr7.4:37934484-37934503 | MS.gene055056:intron | 15.0% |
| !! | TCATGTTATAAGTTTAATAT+TGG | - | chr7.4:37934478-37934497 | MS.gene055056:intron | 15.0% |
| !!! | AATTTTAGTCTCTAATATTT+TGG | - | chr7.4:37936295-37936314 | MS.gene055056:intron | 15.0% |
| !!! | AGAGTTGTTTTTTTTTTTTA+GGG | + | chr7.4:37933265-37933284 | None:intergenic | 15.0% |
| !!! | CATATACAATCTTTTAATAA+AGG | + | chr7.4:37936430-37936449 | None:intergenic | 15.0% |
| !!! | GTTTTTTTGTTATTTATGTA+AGG | - | chr7.4:37935505-37935524 | MS.gene055056:CDS | 15.0% |
| !!! | TATTTTATTTGATCGTAAAA+TGG | - | chr7.4:37934774-37934793 | MS.gene055056:intron | 15.0% |
| !!! | TTATAGAATATTAGTGTTTT+GGG | - | chr7.4:37935984-37936003 | MS.gene055056:CDS | 15.0% |
| !!! | TTTATAGAATATTAGTGTTT+TGG | - | chr7.4:37935983-37936002 | MS.gene055056:CDS | 15.0% |
| !!! | TTTTTTTGATTTTTACAGTT+TGG | - | chr7.4:37936488-37936507 | MS.gene055056:CDS | 15.0% |
| !! | AAAAATTATAGCTAAAGAGT+TGG | + | chr7.4:37933309-37933328 | None:intergenic | 20.0% |
| !! | AAACAATATCATGATCAAAT+TGG | - | chr7.4:37934020-37934039 | MS.gene055056:CDS | 20.0% |
| !! | AAAGAATATACACATTTACT+TGG | + | chr7.4:37935033-37935052 | None:intergenic | 20.0% |
| !! | AATTTGATCATGATATTGTT+TGG | + | chr7.4:37934021-37934040 | None:intergenic | 20.0% |
| !! | ACGATCAAATAAAATATGAT+AGG | + | chr7.4:37934770-37934789 | None:intergenic | 20.0% |
| !! | ACTATATTAAAGATTTGATC+TGG | - | chr7.4:37935058-37935077 | MS.gene055056:CDS | 20.0% |
| !! | CTTTCTTAAAATTTGTGTAA+AGG | + | chr7.4:37934693-37934712 | None:intergenic | 20.0% |
| !! | GGTTAATTAACTAAATGAAT+TGG | - | chr7.4:37936063-37936082 | MS.gene055056:CDS | 20.0% |
| !! | TTAAAATTTGTGTAAAGGAA+GGG | + | chr7.4:37934688-37934707 | None:intergenic | 20.0% |
| !!! | GAGAGTTGTTTTTTTTTTTT+AGG | + | chr7.4:37933266-37933285 | None:intergenic | 20.0% |
| !!! | TCAGCATAATTAATTTTCAT+GGG | + | chr7.4:37934137-37934156 | None:intergenic | 20.0% |
| !!! | TTCAGCATAATTAATTTTCA+TGG | + | chr7.4:37934138-37934157 | None:intergenic | 20.0% |
| !!! | TTTTCCTTAGAAAATTGATA+AGG | - | chr7.4:37933446-37933465 | MS.gene055056:intron | 20.0% |
| !!! | TTTTCCTTATCAATTTTCTA+AGG | + | chr7.4:37933453-37933472 | None:intergenic | 20.0% |
| !!! | TTTTTTTTTATGATACAGCA+TGG | - | chr7.4:37933401-37933420 | MS.gene055056:intron | 20.0% |
| ! | AAAATGAACTGTCTTTATTG+TGG | - | chr7.4:37936237-37936256 | MS.gene055056:intron | 25.0% |
| ! | AAATTTAAGTCAAGATGATG+TGG | - | chr7.4:37935805-37935824 | MS.gene055056:CDS | 25.0% |
| ! | AAATTTATTATTCCCGAGAA+AGG | - | chr7.4:37934833-37934852 | MS.gene055056:intron | 25.0% |
| ! | AACATTAAGAAACACTATGA+AGG | - | chr7.4:37935674-37935693 | MS.gene055056:CDS | 25.0% |
| ! | ACAATTAAGAAAAAAACACG+TGG | - | chr7.4:37934508-37934527 | MS.gene055056:intron | 25.0% |
| ! | ACATCATCTTGACTTAAATT+TGG | + | chr7.4:37935806-37935825 | None:intergenic | 25.0% |
| ! | ATATTAAAGATTTGATCTGG+TGG | - | chr7.4:37935061-37935080 | MS.gene055056:CDS | 25.0% |
| ! | CTTAAAATTTGTGTAAAGGA+AGG | + | chr7.4:37934689-37934708 | None:intergenic | 25.0% |
| ! | GTGAAATTCGATAATTTGAT+TGG | + | chr7.4:37933765-37933784 | None:intergenic | 25.0% |
| ! | TATGCTGAAAATGACAATTT+AGG | - | chr7.4:37934149-37934168 | MS.gene055056:intron | 25.0% |
| ! | TATTAAAGATTTGATCTGGT+GGG | - | chr7.4:37935062-37935081 | MS.gene055056:CDS | 25.0% |
| ! | TTATCGAATTTCACAACAAT+TGG | - | chr7.4:37933771-37933790 | MS.gene055056:CDS | 25.0% |
| ! | TTCATAGTGTTTCTTAATGT+TGG | + | chr7.4:37935675-37935694 | None:intergenic | 25.0% |
| !! | AGATATATGGAATTTTGTTC+AGG | - | chr7.4:37934732-37934751 | MS.gene055056:CDS | 25.0% |
| !! | CAGGAAATTGTTGAAATTTT+GGG | - | chr7.4:37934994-37935013 | MS.gene055056:CDS | 25.0% |
| !! | CGAATCATAGCAAAAATTTT+CGG | + | chr7.4:37935199-37935218 | None:intergenic | 25.0% |
| !! | CTAATATATCATACCTTTTC+AGG | + | chr7.4:37935902-37935921 | None:intergenic | 25.0% |
| !! | GAAGTTATACTTGATGATAT+TGG | - | chr7.4:37934580-37934599 | MS.gene055056:CDS | 25.0% |
| !! | TCAGGAAATTGTTGAAATTT+TGG | - | chr7.4:37934993-37935012 | MS.gene055056:CDS | 25.0% |
| !! | TTGATGACATTCTATATAGA+AGG | - | chr7.4:37936042-37936061 | MS.gene055056:CDS | 25.0% |
| !!! | AAGACAGTTCATTTTAATGT+CGG | + | chr7.4:37936232-37936251 | None:intergenic | 25.0% |
| AAAAGGATTTAACCTCAAAC+AGG | - | chr7.4:37933796-37933815 | MS.gene055056:CDS | 30.0% | |
| AAAGAAAAAACCTGTGAGAA+AGG | - | chr7.4:37934088-37934107 | MS.gene055056:intron | 30.0% | |
| AAAGGATTTAACCTCAAACA+GGG | - | chr7.4:37933797-37933816 | MS.gene055056:CDS | 30.0% | |
| AACCTTATGACTCAAATCAA+AGG | - | chr7.4:37933921-37933940 | MS.gene055056:CDS | 30.0% | |
| AAGAAAGTTGTAGAGAATCA+CGG | - | chr7.4:37934706-37934725 | MS.gene055056:CDS | 30.0% | |
| ACTCAATGCTTGAAAATTCA+TGG | - | chr7.4:37934535-37934554 | MS.gene055056:intron | 30.0% | |
| CATATTCAACCTTAAAGGAT+AGG | - | chr7.4:37934933-37934952 | MS.gene055056:CDS | 30.0% | |
| CCAGAAAAATACTGTCAATA+AGG | - | chr7.4:37935144-37935163 | MS.gene055056:intron | 30.0% | |
| GAAGAGAGTTGTTGAAATAT+TGG | + | chr7.4:37933243-37933262 | None:intergenic | 30.0% | |
| GACAATTGTTGAGTTTCTTA+AGG | - | chr7.4:37934280-37934299 | MS.gene055056:intron | 30.0% | |
| GAGTTGTTGAAATATTGGAT+TGG | + | chr7.4:37933238-37933257 | None:intergenic | 30.0% | |
| TAATGCTACAAGATTAGACA+AGG | - | chr7.4:37933692-37933711 | MS.gene055056:intron | 30.0% | |
| TACACATTTACTTGGATAGT+AGG | + | chr7.4:37935025-37935044 | None:intergenic | 30.0% | |
| TATGGAAGAAGAAAATGAAG+AGG | - | chr7.4:37934373-37934392 | MS.gene055056:intron | 30.0% | |
| TCATTCTTCTTCAACATTGA+CGG | + | chr7.4:37935644-37935663 | None:intergenic | 30.0% | |
| TGAAAAATATGTTGCACAAG+TGG | - | chr7.4:37933608-37933627 | MS.gene055056:intron | 30.0% | |
| TGCTATGATTCGACAAAAAT+TGG | - | chr7.4:37935207-37935226 | MS.gene055056:CDS | 30.0% | |
| TTCAACAATTTCCTGAAATG+AGG | + | chr7.4:37934989-37935008 | None:intergenic | 30.0% | |
| TTCGATAAACATTTCTGCTT+GGG | + | chr7.4:37935364-37935383 | None:intergenic | 30.0% | |
| TTTCACAACAATTGGTCAAA+AGG | - | chr7.4:37933779-37933798 | MS.gene055056:CDS | 30.0% | |
| TTTCGATAAACATTTCTGCT+TGG | + | chr7.4:37935365-37935384 | None:intergenic | 30.0% | |
| ! | AATTTCTCTTTTGTTGGATC+AGG | + | chr7.4:37933825-37933844 | None:intergenic | 30.0% |
| ! | CCTTATTGACAGTATTTTTC+TGG | + | chr7.4:37935147-37935166 | None:intergenic | 30.0% |
| ! | GCATCAAATTTCTCTTTTGT+TGG | + | chr7.4:37933831-37933850 | None:intergenic | 30.0% |
| ! | GGACTGAGAATATTGAATTT+TGG | - | chr7.4:37936005-37936024 | MS.gene055056:CDS | 30.0% |
| !! | AAAAGTTGATGAAGAAACAG+AGG | - | chr7.4:37935404-37935423 | MS.gene055056:CDS | 30.0% |
| !! | ATCCTTTGATTTGAGTCATA+AGG | + | chr7.4:37933926-37933945 | None:intergenic | 30.0% |
| !! | CTATCCTTTAAGGTTGAATA+TGG | + | chr7.4:37934935-37934954 | None:intergenic | 30.0% |
| !! | TTTCTAGAATCAATGATGCT+TGG | - | chr7.4:37934870-37934889 | MS.gene055056:CDS | 30.0% |
| !!! | TGAATTTTCAAGCATTGAGT+AGG | + | chr7.4:37934535-37934554 | None:intergenic | 30.0% |
| !!! | TTTCTCACAGGTTTTTTCTT+TGG | + | chr7.4:37934089-37934108 | None:intergenic | 30.0% |
| AAATATGTTGCACAAGTGGT+TGG | - | chr7.4:37933612-37933631 | MS.gene055056:intron | 35.0% | |
| AACCTTATGACTCAAACCAA+AGG | - | chr7.4:37934044-37934063 | MS.gene055056:CDS | 35.0% | |
| AAGAGAGAATCCCAAAAAAC+GGG | - | chr7.4:37934175-37934194 | MS.gene055056:intron | 35.0% | |
| AAGGATTTAACCTCAAACAG+GGG | - | chr7.4:37933798-37933817 | MS.gene055056:CDS | 35.0% | |
| AATACGCAGTAGATGAGTAT+TGG | - | chr7.4:37936131-37936150 | MS.gene055056:CDS | 35.0% | |
| AATTTCCTGAAATGAGGTTC+TGG | + | chr7.4:37934983-37935002 | None:intergenic | 35.0% | |
| AGAAAGTTGTAGAGAATCAC+GGG | - | chr7.4:37934707-37934726 | MS.gene055056:CDS | 35.0% | |
| AGAAGTTTATACACCGAATG+GGG | - | chr7.4:37935173-37935192 | MS.gene055056:intron | 35.0% | |
| AGACAAAACCAAGATCCAAA+AGG | - | chr7.4:37933897-37933916 | MS.gene055056:CDS | 35.0% | |
| CAAACAAAGACTGAAACACT+TGG | + | chr7.4:37935574-37935593 | None:intergenic | 35.0% | |
| CAAGAGAGAATCCCAAAAAA+CGG | - | chr7.4:37934174-37934193 | MS.gene055056:intron | 35.0% | |
| CAAGTGTTTCAGTCTTTGTT+TGG | - | chr7.4:37935572-37935591 | MS.gene055056:CDS | 35.0% | |
| CAGAAGTTTATACACCGAAT+GGG | - | chr7.4:37935172-37935191 | MS.gene055056:intron | 35.0% | |
| CATTTACTTGGATAGTAGGA+TGG | + | chr7.4:37935021-37935040 | None:intergenic | 35.0% | |
| CTTTATTGTGGTCTTTGACA+CGG | - | chr7.4:37936249-37936268 | MS.gene055056:intron | 35.0% | |
| GAAGAAGAAAATGAAGAGGA+AGG | - | chr7.4:37934377-37934396 | MS.gene055056:intron | 35.0% | |
| GTGCTTTAACCTATCCTTTA+AGG | + | chr7.4:37934945-37934964 | None:intergenic | 35.0% | |
| TAAAGGATAGGTTAAAGCAC+AGG | - | chr7.4:37934945-37934964 | MS.gene055056:CDS | 35.0% | |
| TCAATGCTTGATCTTGCATT+GGG | + | chr7.4:37933540-37933559 | None:intergenic | 35.0% | |
| TCTGCCATATTCAACCTTAA+AGG | - | chr7.4:37934928-37934947 | MS.gene055056:CDS | 35.0% | |
| TGAAGAAGATGAAGAAGAGT+TGG | - | chr7.4:37934322-37934341 | MS.gene055056:intron | 35.0% | |
| TGAGAGAATATGTTACTGAC+CGG | + | chr7.4:37933170-37933189 | None:intergenic | 35.0% | |
| TGCTTCATTTGTGACTTTCT+TGG | + | chr7.4:37933853-37933872 | None:intergenic | 35.0% | |
| TTATTATTCCCGAGAAAGGA+AGG | - | chr7.4:37934837-37934856 | MS.gene055056:intron | 35.0% | |
| TTCAATGCTTGATCTTGCAT+TGG | + | chr7.4:37933541-37933560 | None:intergenic | 35.0% | |
| TTCCTCTTGAAGATCATCTT+CGG | + | chr7.4:37936516-37936535 | None:intergenic | 35.0% | |
| TTGGAAAATGAAGACGAAGA+TGG | - | chr7.4:37934341-37934360 | MS.gene055056:intron | 35.0% | |
| TTGGATTGAATCCTGAAGTT+TGG | + | chr7.4:37935531-37935550 | None:intergenic | 35.0% | |
| TTGTTTCAGTTGTGTTCTTG+TGG | - | chr7.4:37936184-37936203 | MS.gene055056:intron | 35.0% | |
| TTGTTTGGTAAAGAAAAGCC+CGG | - | chr7.4:37935587-37935606 | MS.gene055056:CDS | 35.0% | |
| TTTATGTAAGGCCAAACTTC+AGG | - | chr7.4:37935517-37935536 | MS.gene055056:CDS | 35.0% | |
| TTTATTGTGGTCTTTGACAC+GGG | - | chr7.4:37936250-37936269 | MS.gene055056:intron | 35.0% | |
| ! | CAATCCTAAACAAAGGCTTT+TGG | + | chr7.4:37933731-37933750 | None:intergenic | 35.0% |
| ! | GATAATTTGATTGGTGCTTG+AGG | + | chr7.4:37933756-37933775 | None:intergenic | 35.0% |
| ! | TCATCAACTTTTCCTTTTCG+AGG | + | chr7.4:37935396-37935415 | None:intergenic | 35.0% |
| ! | TCTGACTTGAGTATGTTTCT+TGG | - | chr7.4:37934634-37934653 | MS.gene055056:CDS | 35.0% |
| !! | ATCATACCTTTTCAGGAACA+TGG | + | chr7.4:37935895-37935914 | None:intergenic | 35.0% |
| !! | ATCCTTTGGTTTGAGTCATA+AGG | + | chr7.4:37934049-37934068 | None:intergenic | 35.0% |
| !! | ATTGTCGTTGATTTGCACAA+CGG | + | chr7.4:37934266-37934285 | None:intergenic | 35.0% |
| !! | TCATACCTTTTCAGGAACAT+GGG | + | chr7.4:37935894-37935913 | None:intergenic | 35.0% |
| !! | TGCAAGATCAAGCATTGAAT+TGG | - | chr7.4:37933542-37933561 | MS.gene055056:intron | 35.0% |
| AAAGACTGAAACACTTGGTC+TGG | + | chr7.4:37935569-37935588 | None:intergenic | 40.0% | |
| AAAGCTGAAAGCTCAAGACA+AGG | - | chr7.4:37933485-37933504 | MS.gene055056:intron | 40.0% | |
| AAATGACTAGCATGAAGGAG+AGG | - | chr7.4:37935699-37935718 | MS.gene055056:CDS | 40.0% | |
| AACACCTTTCCTTCCTTTCT+CGG | + | chr7.4:37934849-37934868 | None:intergenic | 40.0% | |
| AAGCTGAAAGCTCAAGACAA+GGG | - | chr7.4:37933486-37933505 | MS.gene055056:intron | 40.0% | |
| AAGTACCAGAACCTCATTTC+AGG | - | chr7.4:37934975-37934994 | MS.gene055056:CDS | 40.0% | |
| AATATGTTACTGACCGGTGA+TGG | + | chr7.4:37933164-37933183 | None:intergenic | 40.0% | |
| ACGAGTCATTGACAAAGAAG+AGG | - | chr7.4:37935732-37935751 | MS.gene055056:CDS | 40.0% | |
| AGAATCACGGGGAAGATATA+TGG | - | chr7.4:37934719-37934738 | MS.gene055056:CDS | 40.0% | |
| AGATGATGTGGAGAACATGA+TGG | - | chr7.4:37935817-37935836 | MS.gene055056:CDS | 40.0% | |
| AGGTGAAATGACTAGCATGA+AGG | - | chr7.4:37935694-37935713 | MS.gene055056:CDS | 40.0% | |
| ATCAACCCATGTTCCTGAAA+AGG | - | chr7.4:37935886-37935905 | MS.gene055056:CDS | 40.0% | |
| CATCGGTGACTAAAAACCAA+GGG | - | chr7.4:37933994-37934013 | MS.gene055056:CDS | 40.0% | |
| CATGATATTGTTTGGACCCT+TGG | + | chr7.4:37934013-37934032 | None:intergenic | 40.0% | |
| CGAAGATGGAGAATATGCTA+TGG | - | chr7.4:37934355-37934374 | MS.gene055056:intron | 40.0% | |
| CTGATTCTGCACAAATCCTT+TGG | + | chr7.4:37934063-37934082 | None:intergenic | 40.0% | |
| GAAAGTTGTAGAGAATCACG+GGG | - | chr7.4:37934708-37934727 | MS.gene055056:CDS | 40.0% | |
| GAAGAAAATGAAGAGGAAGG+TGG | - | chr7.4:37934380-37934399 | MS.gene055056:intron | 40.0% | |
| GAGGAAGGTGGTGAAAATAA+TGG | - | chr7.4:37934392-37934411 | MS.gene055056:CDS | 40.0% | |
| GATGATATTGGAGAACCGAT+TGG | - | chr7.4:37934592-37934611 | MS.gene055056:CDS | 40.0% | |
| GATGATGTGGAGAACATGAT+GGG | - | chr7.4:37935818-37935837 | MS.gene055056:CDS | 40.0% | |
| GCAGAAGTTTATACACCGAA+TGG | - | chr7.4:37935171-37935190 | MS.gene055056:intron | 40.0% | |
| GGTTTCGAAATCGAAGAAGA+CGG | + | chr7.4:37933143-37933162 | None:intergenic | 40.0% | |
| GTCATTGACAAAGAAGAGGA+TGG | - | chr7.4:37935736-37935755 | MS.gene055056:CDS | 40.0% | |
| TCAAGAACTACCTTTCTCAC+AGG | + | chr7.4:37934101-37934120 | None:intergenic | 40.0% | |
| TCCAAAACAACGAACTCTAC+CGG | + | chr7.4:37935609-37935628 | None:intergenic | 40.0% | |
| TCCTCTTGAAGATCATCTTC+GGG | + | chr7.4:37936515-37936534 | None:intergenic | 40.0% | |
| TGAGGTGCAATCCTAAACAA+AGG | + | chr7.4:37933738-37933757 | None:intergenic | 40.0% | |
| TGCATTGGGTAGCTCAAATT+TGG | + | chr7.4:37933526-37933545 | None:intergenic | 40.0% | |
| TGGCTTATCTTCTGCAATGT+AGG | + | chr7.4:37935127-37935146 | None:intergenic | 40.0% | |
| TTCGATTTCGAAACCATCAC+CGG | - | chr7.4:37933148-37933167 | MS.gene055056:intron | 40.0% | |
| TTGTCTTGAGCTTTCAGCTT+TGG | + | chr7.4:37933486-37933505 | None:intergenic | 40.0% | |
| ! | AACATGATGGGACATGCTTT+AGG | - | chr7.4:37935830-37935849 | MS.gene055056:CDS | 40.0% |
| ! | CAAAAATTTTCGGCCCCATT+CGG | + | chr7.4:37935189-37935208 | None:intergenic | 40.0% |
| ! | GAGTCCAAAAGCCTTTGTTT+AGG | - | chr7.4:37933724-37933743 | MS.gene055056:CDS | 40.0% |
| ! | TAAGGTTGCCTTTTGGATCT+TGG | + | chr7.4:37933908-37933927 | None:intergenic | 40.0% |
| ! | TGAGTCATAAGGTTGCCTTT+TGG | + | chr7.4:37933915-37933934 | None:intergenic | 40.0% |
| !! | GATCAAGCATTGAATTGGCT+AGG | - | chr7.4:37933547-37933566 | MS.gene055056:intron | 40.0% |
| !!! | ACTTTTTCGTCAGGTCCAAT+CGG | + | chr7.4:37934610-37934629 | None:intergenic | 40.0% |
| !!! | CTTGGTTTTGTCTTGACTCA+TGG | + | chr7.4:37933890-37933909 | None:intergenic | 40.0% |
| !!! | TCAGAGACAACTTTTTCGTC+AGG | + | chr7.4:37934619-37934638 | None:intergenic | 40.0% |
| AAGCGTGCAAAGAAGGATGA+CGG | - | chr7.4:37935327-37935346 | MS.gene055056:CDS | 45.0% | |
| ACACCTTTCCTTCCTTTCTC+GGG | + | chr7.4:37934848-37934867 | None:intergenic | 45.0% | |
| ACCCGAAGATGATCTTCAAG+AGG | - | chr7.4:37936511-37936530 | MS.gene055056:CDS | 45.0% | |
| AGAATCCCAAAAAACGGGTG+GGG | - | chr7.4:37934180-37934199 | MS.gene055056:CDS | 45.0% | |
| AGAGAATCCCAAAAAACGGG+TGG | - | chr7.4:37934178-37934197 | MS.gene055056:CDS | 45.0% | |
| ATTCCCGAGAAAGGAAGGAA+AGG | - | chr7.4:37934842-37934861 | MS.gene055056:intron | 45.0% | |
| CAGTTGTGTTCTTGTGGCTT+TGG | - | chr7.4:37936190-37936209 | MS.gene055056:intron | 45.0% | |
| CCAAAACAACGAACTCTACC+GGG | + | chr7.4:37935608-37935627 | None:intergenic | 45.0% | |
| CGAAATCGAAGAAGACGGTT+TGG | + | chr7.4:37933138-37933157 | None:intergenic | 45.0% | |
| CTGGAGACTGATTGGAATCT+TGG | + | chr7.4:37935550-37935569 | None:intergenic | 45.0% | |
| GAAACACGTCAACCTCGAAA+AGG | - | chr7.4:37935381-37935400 | MS.gene055056:CDS | 45.0% | |
| GAGAATCCCAAAAAACGGGT+GGG | - | chr7.4:37934179-37934198 | MS.gene055056:CDS | 45.0% | |
| GAGAGTCACGAATGAAGCAT+CGG | - | chr7.4:37933977-37933996 | MS.gene055056:CDS | 45.0% | |
| GCTTCATTCGTGACTCTCTT+GGG | + | chr7.4:37933975-37933994 | None:intergenic | 45.0% | |
| GGATGAAGACGATGAGGTAA+TGG | - | chr7.4:37934202-37934221 | MS.gene055056:CDS | 45.0% | |
| TGCTTCATTCGTGACTCTCT+TGG | + | chr7.4:37933976-37933995 | None:intergenic | 45.0% | |
| ! | ACAAAGGCTTTTGGACTCTG+TGG | + | chr7.4:37933722-37933741 | None:intergenic | 45.0% |
| ! | ACCTGAAAAGCGTGCAAAGA+AGG | - | chr7.4:37935320-37935339 | MS.gene055056:CDS | 45.0% |
| ! | CGAAGAAGACGGTTTGGATA+TGG | + | chr7.4:37933132-37933151 | None:intergenic | 45.0% |
| ! | GCATCGGTGACTAAAAACCA+AGG | - | chr7.4:37933993-37934012 | MS.gene055056:CDS | 45.0% |
| ! | TCCTTCTTTGCACGCTTTTC+AGG | + | chr7.4:37935324-37935343 | None:intergenic | 45.0% |
| ! | TGAGGTTCTGGTACTTCTTC+AGG | + | chr7.4:37934971-37934990 | None:intergenic | 45.0% |
| !! | ACGCAGTAGATGAGTATTGG+AGG | - | chr7.4:37936134-37936153 | MS.gene055056:CDS | 45.0% |
| !!! | TTTATTTTATATCTTATAAT+TGG | + | chr7.4:37936371-37936390 | None:intergenic | 5.0% |
| AGCGTGCAAAGAAGGATGAC+GGG | - | chr7.4:37935328-37935347 | MS.gene055056:CDS | 50.0% | |
| CACTTGGTCTGGAGACTGAT+TGG | + | chr7.4:37935558-37935577 | None:intergenic | 50.0% | |
| CTGAAAGCTCAAGACAAGGG+TGG | - | chr7.4:37933489-37933508 | MS.gene055056:intron | 50.0% | |
| GAATCCCAAAAAACGGGTGG+GGG | - | chr7.4:37934181-37934200 | MS.gene055056:CDS | 50.0% | |
| GACTAGCATGAAGGAGAGGA+TGG | - | chr7.4:37935703-37935722 | MS.gene055056:CDS | 50.0% | |
| TGTTTCTTGGCACTGTCGCT+AGG | - | chr7.4:37934647-37934666 | MS.gene055056:CDS | 50.0% | |
| ! | CCCGGTAGAGTTCGTTGTTT+TGG | - | chr7.4:37935605-37935624 | MS.gene055056:CDS | 50.0% |
| !! | CATGGGTTGATGCAGACGAA+TGG | + | chr7.4:37935877-37935896 | None:intergenic | 50.0% |
| !!! | TCATCCCCCACCCGTTTTTT+GGG | + | chr7.4:37934188-37934207 | None:intergenic | 50.0% |
| !!! | TTCATCCCCCACCCGTTTTT+TGG | + | chr7.4:37934189-37934208 | None:intergenic | 50.0% |
| GCGTGCAAAGAAGGATGACG+GGG | - | chr7.4:37935329-37935348 | MS.gene055056:CDS | 55.0% | |
| TGGATCAGGACCCCTGTTTG+AGG | + | chr7.4:37933811-37933830 | None:intergenic | 55.0% | |
| !! | TGCAAAGAAGGATGACGGGG+AGG | - | chr7.4:37935332-37935351 | MS.gene055056:CDS | 55.0% |
| GGTGGGGGATGAAGACGATG+AGG | - | chr7.4:37934196-37934215 | MS.gene055056:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 37933074 | 37936538 | 37933074 | ID=MS.gene055056 |
| chr7.4 | mRNA | 37933074 | 37936538 | 37933074 | ID=MS.gene055056.t1;Parent=MS.gene055056 |
| chr7.4 | exon | 37936443 | 37936538 | 37936443 | ID=MS.gene055056.t1.exon1;Parent=MS.gene055056.t1 |
| chr7.4 | CDS | 37936443 | 37936538 | 37936443 | ID=cds.MS.gene055056.t1;Parent=MS.gene055056.t1 |
| chr7.4 | exon | 37935199 | 37936156 | 37935199 | ID=MS.gene055056.t1.exon2;Parent=MS.gene055056.t1 |
| chr7.4 | CDS | 37935199 | 37936156 | 37935199 | ID=cds.MS.gene055056.t1;Parent=MS.gene055056.t1 |
| chr7.4 | exon | 37934859 | 37935106 | 37934859 | ID=MS.gene055056.t1.exon3;Parent=MS.gene055056.t1 |
| chr7.4 | CDS | 37934859 | 37935106 | 37934859 | ID=cds.MS.gene055056.t1;Parent=MS.gene055056.t1 |
| chr7.4 | exon | 37934579 | 37934782 | 37934579 | ID=MS.gene055056.t1.exon4;Parent=MS.gene055056.t1 |
| chr7.4 | CDS | 37934579 | 37934782 | 37934579 | ID=cds.MS.gene055056.t1;Parent=MS.gene055056.t1 |
| chr7.4 | exon | 37934384 | 37934476 | 37934384 | ID=MS.gene055056.t1.exon5;Parent=MS.gene055056.t1 |
| chr7.4 | CDS | 37934384 | 37934476 | 37934384 | ID=cds.MS.gene055056.t1;Parent=MS.gene055056.t1 |
| chr7.4 | exon | 37934178 | 37934282 | 37934178 | ID=MS.gene055056.t1.exon6;Parent=MS.gene055056.t1 |
| chr7.4 | CDS | 37934178 | 37934282 | 37934178 | ID=cds.MS.gene055056.t1;Parent=MS.gene055056.t1 |
| chr7.4 | exon | 37933705 | 37934085 | 37933705 | ID=MS.gene055056.t1.exon7;Parent=MS.gene055056.t1 |
| chr7.4 | CDS | 37933705 | 37934085 | 37933705 | ID=cds.MS.gene055056.t1;Parent=MS.gene055056.t1 |
| chr7.4 | exon | 37933074 | 37933106 | 37933074 | ID=MS.gene055056.t1.exon8;Parent=MS.gene055056.t1 |
| chr7.4 | CDS | 37933074 | 37933106 | 37933074 | ID=cds.MS.gene055056.t1;Parent=MS.gene055056.t1 |
| Gene Sequence |
| Protein sequence |
