Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64074.t1 | XP_003625469.2 | 97.5 | 1287 | 30 | 1 | 17 | 1301 | 105 | 1391 | 0.00E+00 | 2268.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64074.t1 | Q8RWY6 | 70.0 | 1288 | 374 | 10 | 17 | 1301 | 105 | 1382 | 0.0e+00 | 1615.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64074.t1 | G7KZK2 | 97.5 | 1287 | 30 | 1 | 17 | 1301 | 105 | 1391 | 0.0e+00 | 2268.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050786 | MS.gene64074 | 0.85656 | 2.96E-62 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64074.t1 | MTR_7g099480 | 98.370 | 1288 | 19 | 1 | 17 | 1302 | 105 | 1392 | 0.0 | 2600 |
| MS.gene64074.t1 | MTR_7g099480 | 97.360 | 1288 | 19 | 2 | 17 | 1302 | 105 | 1379 | 0.0 | 2565 |
| MS.gene64074.t1 | MTR_1g069165 | 79.270 | 1288 | 255 | 6 | 17 | 1302 | 105 | 1382 | 0.0 | 2053 |
| MS.gene64074.t1 | MTR_1g069095 | 81.159 | 69 | 13 | 0 | 475 | 543 | 17 | 85 | 1.00e-27 | 108 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64074.t1 | AT2G20190 | 71.140 | 1289 | 359 | 10 | 17 | 1302 | 105 | 1383 | 0.0 | 1789 |
Find 285 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AATCCAATGGGTCAAAATTT+TGG | 0.135895 | 7.4:-10932403 | MS.gene64074:CDS |
| ATTCATTGCATGTTTGTTAA+AGG | 0.188353 | 7.4:+10932984 | None:intergenic |
| CTAAAGTTTCCTTCTCTATA+AGG | 0.193679 | 7.4:+10933603 | None:intergenic |
| GAGCAGCCTGTGCAACTTTA+TGG | 0.200058 | 7.4:+10933256 | None:intergenic |
| GACTGAATATGCAAGATCTT+TGG | 0.219724 | 7.4:+10932426 | None:intergenic |
| CAGGTTCTGACTGGTCTTCC+AGG | 0.245900 | 7.4:-10933398 | MS.gene64074:CDS |
| TCTGACAATTGTGTGCTTAA+AGG | 0.255183 | 7.4:+10936434 | None:intergenic |
| GGCCTCCCTTGAAGAACTTT+TGG | 0.266142 | 7.4:+10938655 | None:intergenic |
| TAGAGTCAGTCTCAAGATTA+TGG | 0.283203 | 7.4:+10932473 | None:intergenic |
| CTTATAGAGAAGGAAACTTT+AGG | 0.288125 | 7.4:-10933602 | MS.gene64074:CDS |
| TGATGACTTGGCAGAATCTT+TGG | 0.288941 | 7.4:+10933785 | None:intergenic |
| GTGCATCTGGCCAATGTTCT+AGG | 0.295028 | 7.4:+10935598 | None:intergenic |
| AGAATTGAAGGTCTTGTTCT+AGG | 0.299793 | 7.4:-10937706 | MS.gene64074:CDS |
| ACTAGTGGCCTCTGAAAATT+AGG | 0.300651 | 7.4:+10933558 | None:intergenic |
| TCAGCCGAACGATGTATTTC+TGG | 0.302985 | 7.4:+10935576 | None:intergenic |
| GTGACCCAAATCTTTCTGTT+AGG | 0.303689 | 7.4:-10939760 | MS.gene64074:CDS |
| CAACGAGTGAAGATAGTTAA+AGG | 0.306671 | 7.4:+10933368 | None:intergenic |
| GCTTCCCTAACAGAAAGATT+TGG | 0.308658 | 7.4:+10939755 | None:intergenic |
| GCTCTTTCAACAATTATTGT+AGG | 0.311129 | 7.4:+10940025 | None:intergenic |
| GCAGTCTGTTTACTTGAAAC+AGG | 0.314143 | 7.4:+10931463 | None:intergenic |
| CCATCTGAAGAGCGAACTTT+TGG | 0.316012 | 7.4:+10938749 | None:intergenic |
| TAAAGTTTCCTTCTCTATAA+GGG | 0.318163 | 7.4:+10933604 | None:intergenic |
| GTGCATACCCGTTGGATAAC+AGG | 0.323270 | 7.4:+10934555 | None:intergenic |
| TTCCCTGACTAACTCCTTAT+CGG | 0.326196 | 7.4:+10937795 | None:intergenic |
| ATCTCTCCGGTCATCAAGTT+TGG | 0.330267 | 7.4:-10934129 | MS.gene64074:CDS |
| GCTATTGAAAGCATGCTTAG+AGG | 0.330768 | 7.4:-10934182 | MS.gene64074:CDS |
| TTATAGAGAAGGAAACTTTA+GGG | 0.331653 | 7.4:-10933601 | MS.gene64074:CDS |
| ACTGAATATGCAAGATCTTT+GGG | 0.337991 | 7.4:+10932427 | None:intergenic |
| CTACAATCTTCCTTCATCTA+TGG | 0.339295 | 7.4:-10938982 | MS.gene64074:intron |
| ATCACGGCCAATTTAGCCTT+TGG | 0.340189 | 7.4:+10933024 | None:intergenic |
| GTGTTGTGAGTATGCTCTTT+TGG | 0.342851 | 7.4:-10935622 | MS.gene64074:CDS |
| TTATCGGAGTATATCTTGAT+AGG | 0.343302 | 7.4:+10937811 | None:intergenic |
| AAGGTCCGCCAAGTTGCTTC+AGG | 0.344427 | 7.4:+10936453 | None:intergenic |
| ATTCCAAGTGGTTATATTAC+CGG | 0.355163 | 7.4:-10938725 | MS.gene64074:CDS |
| ACAACAGAGCCTACTGCTTA+TGG | 0.356181 | 7.4:-10933876 | MS.gene64074:CDS |
| TCGTCTAATCCACCTGGTTA+TGG | 0.356888 | 7.4:-10934359 | MS.gene64074:CDS |
| CCTCTTTAGGATCAATTAAC+CGG | 0.360255 | 7.4:+10933151 | None:intergenic |
| GCAGAAGGTGCTGCTAATAT+TGG | 0.363729 | 7.4:-10932961 | MS.gene64074:CDS |
| CGATGTATTTCTGGTGCATC+TGG | 0.364125 | 7.4:+10935585 | None:intergenic |
| GATATTAATGCCAGGCTAGA+AGG | 0.365688 | 7.4:-10938779 | MS.gene64074:CDS |
| GCTTGCTAAGTTAACCCCTT+TGG | 0.366050 | 7.4:-10932923 | MS.gene64074:CDS |
| CAGGGTCAAAGGATGAAAAT+AGG | 0.367173 | 7.4:+10934574 | None:intergenic |
| TCATTACCTTGGAAGATATT+CGG | 0.368322 | 7.4:-10932614 | MS.gene64074:CDS |
| CAACACTGATAAGCAGTATC+TGG | 0.371758 | 7.4:-10933631 | MS.gene64074:CDS |
| AAGGTCTCCAAAGGCTAAAT+TGG | 0.372750 | 7.4:-10933031 | MS.gene64074:CDS |
| TCCTGCCACCATCACTATCT+AGG | 0.373670 | 7.4:+10932584 | None:intergenic |
| GACGGTTGTGCTTGAGGTGC+TGG | 0.374712 | 7.4:-10928894 | MS.gene64074:CDS |
| CAGCTTGGGCGCACAAAAGC+TGG | 0.376157 | 7.4:-10939994 | MS.gene64074:CDS |
| CAACAAATGACCAGTCTGTT+TGG | 0.378186 | 7.4:-10931414 | MS.gene64074:CDS |
| ACTGCTTATGGTGTCTATAA+AGG | 0.379001 | 7.4:-10933864 | MS.gene64074:CDS |
| CATCCTCATATTCAACTAGA+AGG | 0.381322 | 7.4:-10933731 | MS.gene64074:CDS |
| TTGATCCTAAAGAGGTTGTT+AGG | 0.381649 | 7.4:-10933143 | MS.gene64074:CDS |
| CTTCCCTAACAGAAAGATTT+GGG | 0.383653 | 7.4:+10939756 | None:intergenic |
| TAAGGGTACAGAACGTAGTT+TGG | 0.383982 | 7.4:-10934240 | MS.gene64074:CDS |
| TATGATCCATCTGATGTTGT+AGG | 0.388722 | 7.4:-10932679 | MS.gene64074:CDS |
| ACTCCTCGTTTAGATGTTAA+CGG | 0.390252 | 7.4:-10932322 | MS.gene64074:CDS |
| CAAAGAACTTCCTTCTGCAT+TGG | 0.391885 | 7.4:-10932251 | MS.gene64074:CDS |
| CATTCCTCAAATTCTTCATA+TGG | 0.395024 | 7.4:-10932167 | MS.gene64074:intron |
| TCAGGTTATTGTCCCTCTAC+TGG | 0.398103 | 7.4:-10928296 | MS.gene64074:intron |
| TGACCCAAATCTTTCTGTTA+GGG | 0.402443 | 7.4:-10939759 | MS.gene64074:CDS |
| AATATGTCTGATAAGCATAA+TGG | 0.403866 | 7.4:-10934155 | MS.gene64074:CDS |
| ACAAGCCCAGACCACCATTT+CGG | 0.406322 | 7.4:+10933835 | None:intergenic |
| CCTTTCTTCAGCTTGTGGGC+AGG | 0.410427 | 7.4:-10926947 | MS.gene64074:intron |
| ACTCCGATAAGGAGTTAGTC+AGG | 0.418407 | 7.4:-10937798 | MS.gene64074:CDS |
| GGCTGCCTAACAACCTCTTT+AGG | 0.419642 | 7.4:+10933138 | None:intergenic |
| CTTTCCATGTATCCCTCAAA+AGG | 0.420597 | 7.4:+10933195 | None:intergenic |
| AGACGAAGCAGAGGCTTGAC+TGG | 0.422678 | 7.4:+10934376 | None:intergenic |
| GATGATAACCAGCTATCTCT+TGG | 0.425734 | 7.4:-10933486 | MS.gene64074:CDS |
| CGGTCATCAAGTTTGGATCT+AGG | 0.426025 | 7.4:-10934122 | MS.gene64074:intron |
| GCTTGTGGGCAGGCTCTCTC+AGG | 0.427650 | 7.4:-10926937 | MS.gene64074:CDS |
| TAGTAACCGAAATGGTGGTC+TGG | 0.427859 | 7.4:-10933841 | MS.gene64074:CDS |
| GCTGCTATGCAGAGAATTGA+AGG | 0.429151 | 7.4:-10937718 | MS.gene64074:CDS |
| TACCGAACTTCCACTTCAAC+GGG | 0.429289 | 7.4:-10939915 | MS.gene64074:CDS |
| CGTGGACTCCTGAAGCAACT+TGG | 0.434510 | 7.4:-10936461 | MS.gene64074:CDS |
| TGGTTGAATCCCTTCTAGCC+TGG | 0.434978 | 7.4:+10938769 | None:intergenic |
| TTATCCTTTCTTCAGCTTGT+GGG | 0.437137 | 7.4:-10926951 | MS.gene64074:intron |
| CTGATGACAATAGTGACATC+AGG | 0.441651 | 7.4:-10933677 | MS.gene64074:CDS |
| GCAGAGGCAGCAGCTGGAAA+AGG | 0.442895 | 7.4:+10933924 | None:intergenic |
| TTTAGCACAATCAGCTATAC+GGG | 0.443629 | 7.4:+10935744 | None:intergenic |
| CTCACCATATGAAGAATTTG+AGG | 0.444041 | 7.4:+10932163 | None:intergenic |
| ATGAAGAATTTGAGGAATGC+TGG | 0.446130 | 7.4:+10932171 | None:intergenic |
| ACAGGCAAAGTCACTTGGTA+AGG | 0.446469 | 7.4:-10934258 | MS.gene64074:CDS |
| GGCTCTCAATCTAGCCAACT+TGG | 0.448527 | 7.4:-10932382 | MS.gene64074:CDS |
| CTTTGACCCTGTTATCCAAC+GGG | 0.454812 | 7.4:-10934562 | MS.gene64074:intron |
| CTAGTGAGAAAGAATGCAAC+TGG | 0.460172 | 7.4:-10933540 | MS.gene64074:CDS |
| TCACCTTCCATTCGTGATAG+AGG | 0.462746 | 7.4:-10934416 | MS.gene64074:CDS |
| TGCACCAGAAATACATCGTT+CGG | 0.463715 | 7.4:-10935580 | MS.gene64074:CDS |
| ACATTTCTCCAAGAGATAGC+TGG | 0.465381 | 7.4:+10933478 | None:intergenic |
| TTGAAGAGCTTGTCAAATGA+TGG | 0.468237 | 7.4:+10933898 | None:intergenic |
| TTGATATATACCATAGATGA+AGG | 0.468278 | 7.4:+10938972 | None:intergenic |
| ATCAATTCCATGGCAGACAC+TGG | 0.469342 | 7.4:-10932196 | MS.gene64074:CDS |
| CAGCCATGTTCAACAACATT+GGG | 0.472492 | 7.4:-10933120 | MS.gene64074:CDS |
| TCATTAGAGCGTTTAAATGT+TGG | 0.474930 | 7.4:-10932292 | MS.gene64074:CDS |
| CTCTGGTGTACTTCTTTCAC+AGG | 0.477132 | 7.4:-10934276 | MS.gene64074:CDS |
| GAGCTCTCTGACAGAGGAAT+CGG | 0.478338 | 7.4:+10928865 | None:intergenic |
| CAATCTCAACTGAATTCTCC+AGG | 0.479021 | 7.4:+10928630 | None:intergenic |
| TCAAAAGGCTTTCGACATGC+TGG | 0.479225 | 7.4:+10933210 | None:intergenic |
| AGAAGTTCAAGTTTATCGTC+GGG | 0.480812 | 7.4:-10934311 | MS.gene64074:CDS |
| AAGCTTTGAGTGAAGGACTT+AGG | 0.480961 | 7.4:-10933422 | MS.gene64074:CDS |
| TTGAGTGAAGGACTTAGGTC+AGG | 0.481033 | 7.4:-10933417 | MS.gene64074:CDS |
| CTTTCACAGGCAAAGTCACT+TGG | 0.481503 | 7.4:-10934263 | MS.gene64074:CDS |
| TTGCACGAAGCACTGCATTC+CGG | 0.482107 | 7.4:+10935716 | None:intergenic |
| ATAGTGATGGTGGCAGGAAG+TGG | 0.482456 | 7.4:-10932579 | MS.gene64074:CDS |
| CCGGTTAATTGATCCTAAAG+AGG | 0.482879 | 7.4:-10933151 | MS.gene64074:CDS |
| GTTGCATTCTTTCTCACTAG+TGG | 0.484489 | 7.4:+10933543 | None:intergenic |
| TGTTCTGTAGATAGTTTACT+AGG | 0.486114 | 7.4:+10932731 | None:intergenic |
| TATAAAGGTAGTAACCGAAA+TGG | 0.486704 | 7.4:-10933849 | MS.gene64074:CDS |
| ACAACTTCTAGAGTTCCCTT+TGG | 0.486937 | 7.4:+10933333 | None:intergenic |
| TTGTTAACAGAAAGATGCCC+TGG | 0.489238 | 7.4:-10928648 | MS.gene64074:intron |
| TTCCAAGTGGTTATATTACC+GGG | 0.489260 | 7.4:-10938724 | MS.gene64074:CDS |
| ACAATAATTGTTGAAAGAGC+AGG | 0.489351 | 7.4:-10940022 | MS.gene64074:CDS |
| AGGTTCTGACTGGTCTTCCA+GGG | 0.490533 | 7.4:-10933397 | MS.gene64074:CDS |
| GATACTGCTTATCAGTGTTG+TGG | 0.490699 | 7.4:+10933634 | None:intergenic |
| TCGGGGACATCTGTCTCCTC+TGG | 0.490803 | 7.4:-10934293 | MS.gene64074:CDS |
| TACAACATCAGATGGATCAT+AGG | 0.493812 | 7.4:+10932681 | None:intergenic |
| AAGATCTAGCATCGTAAAGC+AGG | 0.494097 | 7.4:-10936408 | MS.gene64074:intron |
| ATTGCAGTTAATAAATGAAG+AGG | 0.495585 | 7.4:-10934465 | MS.gene64074:intron |
| GGAAGGATAGCCCGTTGAAG+TGG | 0.495687 | 7.4:+10939905 | None:intergenic |
| TCTAGGAAAGCTCATTACCT+TGG | 0.498571 | 7.4:-10932625 | MS.gene64074:CDS |
| AGCCCTTCTAGTTGAATATG+AGG | 0.500351 | 7.4:+10933728 | None:intergenic |
| TATATCTTGATAGGGTCTAC+AGG | 0.500636 | 7.4:+10937820 | None:intergenic |
| AGTAACCGAAATGGTGGTCT+GGG | 0.501600 | 7.4:-10933840 | MS.gene64074:CDS |
| CTTCTGAAAGATTACAAGAA+AGG | 0.502501 | 7.4:-10933707 | MS.gene64074:CDS |
| CAAAGGCCAAAAGTTCTTCA+AGG | 0.502503 | 7.4:-10938661 | MS.gene64074:CDS |
| AGCATAATGGATCATCTCTC+CGG | 0.503614 | 7.4:-10934142 | MS.gene64074:CDS |
| CGTACACTCAAACATCTGAA+TGG | 0.504559 | 7.4:+10928428 | None:intergenic |
| GCAGCCATGTTCAACAACAT+TGG | 0.504747 | 7.4:-10933121 | MS.gene64074:CDS |
| TTCATCACGAAATTGAGGTC+CGG | 0.506159 | 7.4:+10939013 | None:intergenic |
| AAAGAGCAGGATCCTCAGCT+TGG | 0.507528 | 7.4:-10940009 | MS.gene64074:CDS |
| CTTGCGAACATCTGCCACTC+TGG | 0.507950 | 7.4:+10926856 | None:intergenic |
| TGGGATGCAGAGGCAGCAGC+TGG | 0.511453 | 7.4:+10933918 | None:intergenic |
| TATCAAGATATACTCCGATA+AGG | 0.513582 | 7.4:-10937809 | MS.gene64074:CDS |
| AAAGCTTCATGAAGAGATGC+TGG | 0.514105 | 7.4:+10933438 | None:intergenic |
| AAGAGTGAGCTCTCTGACAG+AGG | 0.514120 | 7.4:+10928859 | None:intergenic |
| ATAGTTAAAGGCAGCAACCC+TGG | 0.514896 | 7.4:+10933380 | None:intergenic |
| AGCCCGTTGAAGTGGAAGTT+CGG | 0.515007 | 7.4:+10939913 | None:intergenic |
| TCACATTCAACAGAAGCTGC+TGG | 0.517511 | 7.4:+10932517 | None:intergenic |
| CTTCATGAAGCTTTGAGTGA+AGG | 0.517552 | 7.4:-10933429 | MS.gene64074:CDS |
| CCCTAGATAGTGATGGTGGC+AGG | 0.519354 | 7.4:-10932585 | MS.gene64074:CDS |
| TAATCACAACCAGCTTGAAA+AGG | 0.521733 | 7.4:+10935930 | None:intergenic |
| TATTCTTGTCATGAACCAAA+GGG | 0.522990 | 7.4:+10932908 | None:intergenic |
| ATATTGGCATATTAAAATTG+TGG | 0.523136 | 7.4:-10932945 | MS.gene64074:CDS |
| CAGCTTAACTTGTTAACCAT+AGG | 0.523683 | 7.4:+10940337 | None:intergenic |
| TACAAAAGATATCGTTCCTA+AGG | 0.524211 | 7.4:-10928585 | MS.gene64074:intron |
| TGGCAGGAAGTGGAGCTCTC+AGG | 0.524419 | 7.4:-10932569 | MS.gene64074:CDS |
| GGTGAGGATCATCCAAGTGC+TGG | 0.525863 | 7.4:+10933277 | None:intergenic |
| ATTTGAAGTCTTAATTTCCC+CGG | 0.526322 | 7.4:+10938706 | None:intergenic |
| CTACCGAACTTCCACTTCAA+CGG | 0.529551 | 7.4:-10939916 | MS.gene64074:CDS |
| TGCATACCCGTTGGATAACA+GGG | 0.529598 | 7.4:+10934556 | None:intergenic |
| ACTGAGATAAAACAATGGTC+AGG | 0.529615 | 7.4:+10928456 | None:intergenic |
| GTATGTCTGCTGGCAGGAGG+AGG | 0.532554 | 7.4:-10933515 | MS.gene64074:CDS |
| AAGAGCAGGATCCTCAGCTT+GGG | 0.535482 | 7.4:-10940008 | MS.gene64074:CDS |
| GCTCTCTCAGGAGGAACTGA+TGG | 0.536933 | 7.4:-10926925 | MS.gene64074:CDS |
| ATGGGTATGTTGGTTTCTCT+AGG | 0.537942 | 7.4:-10932642 | MS.gene64074:CDS |
| GTAGGAACGTCATCTGAAGA+TGG | 0.538448 | 7.4:-10932661 | MS.gene64074:CDS |
| GTTGAATATGAGGATGGTAA+AGG | 0.539003 | 7.4:+10933738 | None:intergenic |
| ATATTAATGCCAGGCTAGAA+GGG | 0.539984 | 7.4:-10938778 | MS.gene64074:CDS |
| TCATCTGAAGATGGGTATGT+TGG | 0.541060 | 7.4:-10932652 | MS.gene64074:CDS |
| AATAGGCGACGAGAACGCTC+TGG | 0.543230 | 7.4:+10934591 | None:intergenic |
| GCATATTCAGTCAATCCAAT+GGG | 0.544477 | 7.4:-10932415 | MS.gene64074:CDS |
| AGATGGATCATAGGAAGACT+TGG | 0.544530 | 7.4:+10932690 | None:intergenic |
| GAGCGTTTAAATGTTGGTGA+AGG | 0.545122 | 7.4:-10932286 | MS.gene64074:CDS |
| TAGAAGTTCAAGTTTATCGT+CGG | 0.547585 | 7.4:-10934312 | MS.gene64074:CDS |
| TCCTCACCATAAAGTTGCAC+AGG | 0.548676 | 7.4:-10933262 | MS.gene64074:CDS |
| TACCTTGGAAGATATTCGGC+TGG | 0.549978 | 7.4:-10932610 | MS.gene64074:CDS |
| AACATCTGCAATTGTTGCAA+TGG | 0.551677 | 7.4:-10934336 | MS.gene64074:CDS |
| GAGGCAGCAGCTGGAAAAGG+CGG | 0.552050 | 7.4:+10933927 | None:intergenic |
| CTCTTTAGGATCAATTAACC+GGG | 0.552996 | 7.4:+10933152 | None:intergenic |
| TGCATATTCAGTCAATCCAA+TGG | 0.554459 | 7.4:-10932416 | MS.gene64074:CDS |
| GTATTCTTGTCATGAACCAA+AGG | 0.555569 | 7.4:+10932907 | None:intergenic |
| GGACTCCTGAAGCAACTTGG+CGG | 0.556285 | 7.4:-10936458 | MS.gene64074:CDS |
| GACTTAGGTCAGGTTCTGAC+TGG | 0.556302 | 7.4:-10933407 | MS.gene64074:CDS |
| ATCTAGCCAACTTGGACAAG+TGG | 0.556364 | 7.4:-10932374 | MS.gene64074:CDS |
| TACTGTCCACTTGTCCAAGT+TGG | 0.558331 | 7.4:+10932368 | None:intergenic |
| TGAAGAATTTGAGGAATGCT+GGG | 0.558842 | 7.4:+10932172 | None:intergenic |
| CCAAAAGTTCGCTCTTCAGA+TGG | 0.561614 | 7.4:-10938749 | MS.gene64074:CDS |
| GACGTTCCTACAACATCAGA+TGG | 0.561676 | 7.4:+10932673 | None:intergenic |
| GCAACTGGACGTATGTCTGC+TGG | 0.563541 | 7.4:-10933525 | MS.gene64074:CDS |
| CCTGCCACCATCACTATCTA+GGG | 0.564900 | 7.4:+10932585 | None:intergenic |
| GACTCTAATTGTGACAGTCC+TGG | 0.565623 | 7.4:-10932457 | MS.gene64074:CDS |
| CTAGGTCTACTTCAATGCGA+GGG | 0.565837 | 7.4:+10932749 | None:intergenic |
| AAAGTTTCCTTCTCTATAAG+GGG | 0.566261 | 7.4:+10933605 | None:intergenic |
| CTATGGTTAACAAGTTAAGC+TGG | 0.568041 | 7.4:-10940336 | MS.gene64074:CDS |
| CTAGATCCAAACTTGATGAC+CGG | 0.568552 | 7.4:+10934123 | None:intergenic |
| ATCCTCATATTCAACTAGAA+GGG | 0.569120 | 7.4:-10933730 | MS.gene64074:CDS |
| TGAAGTTCATCACGAAATTG+AGG | 0.570234 | 7.4:+10939008 | None:intergenic |
| CCTTTGACCCTGTTATCCAA+CGG | 0.572190 | 7.4:-10934563 | MS.gene64074:CDS |
| AGGTGAAAGATATTAATGCC+AGG | 0.573894 | 7.4:-10938787 | MS.gene64074:CDS |
| CTGGATGCCCCTTATAGAGA+AGG | 0.574876 | 7.4:-10933612 | MS.gene64074:CDS |
| GGACAGTAGCATGAATTTCG+AGG | 0.575082 | 7.4:-10932353 | MS.gene64074:CDS |
| TTGAATTTGAGTGATTATGT+CGG | 0.577543 | 7.4:+10933812 | None:intergenic |
| TCGTTCGGCTGAGTTATATG+AGG | 0.577643 | 7.4:-10935565 | MS.gene64074:CDS |
| CCGTTGGATAACAGGGTCAA+AGG | 0.579058 | 7.4:+10934563 | None:intergenic |
| CTTCACTCGTTGTTGCAGCA+AGG | 0.580162 | 7.4:-10933357 | MS.gene64074:CDS |
| TTGCATTAATTGCTTAACAA+AGG | 0.580296 | 7.4:-10928245 | MS.gene64074:intron |
| TCAATTCCATGGCAGACACT+GGG | 0.580366 | 7.4:-10932195 | MS.gene64074:CDS |
| TAGGAACGTCATCTGAAGAT+GGG | 0.581520 | 7.4:-10932660 | MS.gene64074:CDS |
| TCTTTACAGCTTCAGTTGAG+TGG | 0.582306 | 7.4:+10932218 | None:intergenic |
| GAAATGTCAAGTTATTCAGA+TGG | 0.582491 | 7.4:-10933462 | MS.gene64074:CDS |
| TTGTTGCAGCAAGGTCCAAA+GGG | 0.582853 | 7.4:-10933348 | MS.gene64074:CDS |
| GTTGTTGCAGCAAGGTCCAA+AGG | 0.583709 | 7.4:-10933349 | MS.gene64074:CDS |
| CTTCTAGTTGAATATGAGGA+TGG | 0.585471 | 7.4:+10933732 | None:intergenic |
| ATTGATTGCAAATTCAATCA+CGG | 0.585930 | 7.4:+10933008 | None:intergenic |
| GACGAAGCAGAGGCTTGACT+GGG | 0.587080 | 7.4:+10934377 | None:intergenic |
| CAGTTAATAAATGAAGAGGA+TGG | 0.587122 | 7.4:-10934461 | MS.gene64074:CDS |
| AGCAGCTTCTGTTGAATGTG+AGG | 0.587390 | 7.4:-10932515 | MS.gene64074:CDS |
| TCTAGTGAACGTAACAGTGC+AGG | 0.587952 | 7.4:+10933060 | None:intergenic |
| CTCCGATAAGGAGTTAGTCA+GGG | 0.590691 | 7.4:-10937797 | MS.gene64074:CDS |
| TTTCATTCTGAGTTTGTCAG+TGG | 0.592718 | 7.4:-10932812 | MS.gene64074:CDS |
| TCATCATCGGTAACCAGTAG+AGG | 0.592993 | 7.4:+10928283 | None:intergenic |
| ATAGTGACATCAGGGAGGCT+AGG | 0.593421 | 7.4:-10933668 | MS.gene64074:CDS |
| CAGTCTGTTTACTTGAAACA+GGG | 0.594121 | 7.4:+10931464 | None:intergenic |
| CGCCAAGAAAAGTAGTCCAA+AGG | 0.594287 | 7.4:-10938678 | MS.gene64074:CDS |
| CAGGAAATGTATACACAAGC+CGG | 0.594948 | 7.4:-10939032 | MS.gene64074:CDS |
| TGTGGGCAGGCTCTCTCAGG+AGG | 0.596265 | 7.4:-10926934 | MS.gene64074:CDS |
| GCCTGTGCAACTTTATGGTG+AGG | 0.596403 | 7.4:+10933261 | None:intergenic |
| AGCTGTAAAGATCAATTCCA+TGG | 0.596649 | 7.4:-10932206 | MS.gene64074:CDS |
| TTCAGGAGTCCACGAAAACA+TGG | 0.598968 | 7.4:+10936470 | None:intergenic |
| TTAATAAATGAAGAGGATGG+AGG | 0.599331 | 7.4:-10934458 | MS.gene64074:CDS |
| CTGGACGTATGTCTGCTGGC+AGG | 0.600126 | 7.4:-10933521 | MS.gene64074:CDS |
| TATCGGAGTATATCTTGATA+GGG | 0.601105 | 7.4:+10937812 | None:intergenic |
| CAGTGCACCTCTATCACGAA+TGG | 0.601724 | 7.4:+10934409 | None:intergenic |
| GCTGGGCCCAGTGTCTGCCA+TGG | 0.603319 | 7.4:+10932189 | None:intergenic |
| GACAGTAGCATGAATTTCGA+GGG | 0.605478 | 7.4:-10932352 | MS.gene64074:CDS |
| GGAATGCAGTGCTTCGTGCA+AGG | 0.606285 | 7.4:-10935714 | MS.gene64074:intron |
| TCCCCGGTAATATAACCACT+TGG | 0.607725 | 7.4:+10938722 | None:intergenic |
| AGCAGCAGAAGGTGATGTCA+CGG | 0.608738 | 7.4:-10937848 | MS.gene64074:intron |
| ATACCTTGGTCCAAACAGAC+TGG | 0.609551 | 7.4:+10931404 | None:intergenic |
| AAAGGCCAAAAGTTCTTCAA+GGG | 0.611156 | 7.4:-10938660 | MS.gene64074:CDS |
| GGTTAACAAGTTAAGCTGGA+AGG | 0.612232 | 7.4:-10940332 | MS.gene64074:intron |
| CAGGCAAAGTCACTTGGTAA+GGG | 0.612604 | 7.4:-10934257 | MS.gene64074:CDS |
| ATTGAAGGTCTTGTTCTAGG+AGG | 0.613383 | 7.4:-10937703 | MS.gene64074:intron |
| GGCGGATCACGAGACGATGG+AGG | 0.614369 | 7.4:+10933945 | None:intergenic |
| AGATGAACAAAGGTCTCCAA+AGG | 0.615332 | 7.4:-10933040 | MS.gene64074:CDS |
| GGCCAAAAGTTCTTCAAGGG+AGG | 0.616438 | 7.4:-10938657 | MS.gene64074:CDS |
| AAAGGTAGTAACCGAAATGG+TGG | 0.617234 | 7.4:-10933846 | MS.gene64074:CDS |
| TGAAGAGCTTGTCAAATGAT+GGG | 0.618411 | 7.4:+10933899 | None:intergenic |
| AAACATGCAATGAATGCAGA+AGG | 0.618604 | 7.4:-10932976 | MS.gene64074:CDS |
| GCTGGTTCCCTAGATAGTGA+TGG | 0.619613 | 7.4:-10932592 | MS.gene64074:CDS |
| ACTCCCAATGTTGTTGAACA+TGG | 0.621019 | 7.4:+10933117 | None:intergenic |
| AACCAGCCGAATATCTTCCA+AGG | 0.622634 | 7.4:+10932608 | None:intergenic |
| GGTTCCCTAGATAGTGATGG+TGG | 0.622894 | 7.4:-10932589 | MS.gene64074:CDS |
| ATTACTATGATATGATGACT+TGG | 0.624242 | 7.4:+10933773 | None:intergenic |
| TGATTAAGTTCCAATGCAGA+AGG | 0.625253 | 7.4:+10932241 | None:intergenic |
| GCGGATCACGAGACGATGGA+GGG | 0.629075 | 7.4:+10933946 | None:intergenic |
| GACGTATGTCTGCTGGCAGG+AGG | 0.630416 | 7.4:-10933518 | MS.gene64074:CDS |
| GAAGTTCAAGTTTATCGTCG+GGG | 0.631675 | 7.4:-10934310 | MS.gene64074:CDS |
| TGATGACAATAGTGACATCA+GGG | 0.632100 | 7.4:-10933676 | MS.gene64074:CDS |
| ATTGCAGATGTTCCATAACC+AGG | 0.632401 | 7.4:+10934347 | None:intergenic |
| TTATAGACACCATAAGCAGT+AGG | 0.632452 | 7.4:+10933867 | None:intergenic |
| GTAAAGTCAATACAGGAGGA+AGG | 0.632736 | 7.4:+10939888 | None:intergenic |
| TGACCAGTCTGTTTGGACCA+AGG | 0.634255 | 7.4:-10931407 | MS.gene64074:intron |
| TCTGCTTCGTCTAATCCACC+TGG | 0.635431 | 7.4:-10934365 | MS.gene64074:CDS |
| GCACCTCTATCACGAATGGA+AGG | 0.636243 | 7.4:+10934413 | None:intergenic |
| AAGAGGATGGAGGAATACAC+AGG | 0.637453 | 7.4:-10934448 | MS.gene64074:CDS |
| CAGAGTGGCAGATGTTCGCA+AGG | 0.637710 | 7.4:-10926855 | None:intergenic |
| ATCTACAGAACAAGAAAGAG+CGG | 0.639058 | 7.4:-10932720 | MS.gene64074:CDS |
| CATCATCGGTAACCAGTAGA+GGG | 0.639786 | 7.4:+10928284 | None:intergenic |
| CGTTTCAGATGCAATGAGCG+AGG | 0.639838 | 7.4:-10935526 | MS.gene64074:intron |
| ACTAGGTCTACTTCAATGCG+AGG | 0.641616 | 7.4:+10932748 | None:intergenic |
| AAAGGCGGATCACGAGACGA+TGG | 0.642101 | 7.4:+10933942 | None:intergenic |
| GTTGCATGCAAGCAAACAGA+AGG | 0.645304 | 7.4:-10934210 | MS.gene64074:CDS |
| AAAAGAGAAGGTAGAAACGA+GGG | 0.646628 | 7.4:+10926894 | None:intergenic |
| TGTCAAATGATGGGATGCAG+AGG | 0.648596 | 7.4:+10933908 | None:intergenic |
| AATCTCAACTGAATTCTCCA+GGG | 0.650859 | 7.4:+10928631 | None:intergenic |
| TGTTGGCAAGAGACACAGAA+TGG | 0.651487 | 7.4:+10940139 | None:intergenic |
| TCTTCAGATGGTATTCCAAG+TGG | 0.653318 | 7.4:-10938737 | MS.gene64074:CDS |
| CAAAAGCTGGAGAGTCAGAG+AGG | 0.656741 | 7.4:-10939981 | MS.gene64074:CDS |
| TATAGGTACGATCTACTGCA+AGG | 0.659106 | 7.4:-10934644 | MS.gene64074:intron |
| TCCAAGTGGTTATATTACCG+GGG | 0.660621 | 7.4:-10938723 | MS.gene64074:CDS |
| TAGATATGCAATGCTGATGA+CGG | 0.669434 | 7.4:-10931490 | MS.gene64074:CDS |
| CTGCATAGCAGCAATACGAA+CGG | 0.669736 | 7.4:+10937729 | None:intergenic |
| TACGTTCACTAGATGAACAA+AGG | 0.670717 | 7.4:-10933050 | MS.gene64074:CDS |
| TAGGTCTACTTCAATGCGAG+GGG | 0.678410 | 7.4:+10932750 | None:intergenic |
| AGGTGGATTAGACGAAGCAG+AGG | 0.679058 | 7.4:+10934367 | None:intergenic |
| ATTCTTGTCATGAACCAAAG+GGG | 0.689132 | 7.4:+10932909 | None:intergenic |
| CAGAATGAAATTAAGAACTG+CGG | 0.691345 | 7.4:+10932825 | None:intergenic |
| ATCAGACTGAGATAAAACAA+TGG | 0.711078 | 7.4:+10928451 | None:intergenic |
| ATTAACCGGGAAAAGACGTG+TGG | 0.712845 | 7.4:+10933165 | None:intergenic |
| CTGTGAAAGAAGTACACCAG+AGG | 0.717289 | 7.4:+10934277 | None:intergenic |
| GCAGATGTTCCATAACCAGG+TGG | 0.726100 | 7.4:+10934350 | None:intergenic |
| TTAGCACAATCAGCTATACG+GGG | 0.750481 | 7.4:+10935745 | None:intergenic |
| TAGATGAAGGAAGATTGTAG+CGG | 0.777937 | 7.4:+10938985 | None:intergenic |
| TGACAATAGTGACATCAGGG+AGG | 0.783231 | 7.4:-10933673 | MS.gene64074:CDS |
| AGACCGTTAACATCTAAACG+AGG | 0.785577 | 7.4:+10932319 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 10926856 | 10940356 | 10926856 | ID=MS.gene64074 |
| chr7.4 | mRNA | 10926856 | 10940356 | 10926856 | ID=MS.gene64074.t1;Parent=MS.gene64074 |
| chr7.4 | exon | 10940333 | 10940356 | 10940333 | ID=MS.gene64074.t1.exon1;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10940333 | 10940356 | 10940333 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10940139 | 10940183 | 10940139 | ID=MS.gene64074.t1.exon2;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10940139 | 10940183 | 10940139 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10939901 | 10940056 | 10939901 | ID=MS.gene64074.t1.exon3;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10939901 | 10940056 | 10939901 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10939736 | 10939798 | 10939736 | ID=MS.gene64074.t1.exon4;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10939736 | 10939798 | 10939736 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10938983 | 10939051 | 10938983 | ID=MS.gene64074.t1.exon5;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10938983 | 10939051 | 10938983 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10938642 | 10938807 | 10938642 | ID=MS.gene64074.t1.exon6;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10938642 | 10938807 | 10938642 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10937704 | 10937865 | 10937704 | ID=MS.gene64074.t1.exon7;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10937704 | 10937865 | 10937704 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10936409 | 10936506 | 10936409 | ID=MS.gene64074.t1.exon8;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10936409 | 10936506 | 10936409 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10936032 | 10936106 | 10936032 | ID=MS.gene64074.t1.exon9;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10936032 | 10936106 | 10936032 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10935886 | 10935954 | 10935886 | ID=MS.gene64074.t1.exon10;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10935886 | 10935954 | 10935886 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10935715 | 10935800 | 10935715 | ID=MS.gene64074.t1.exon11;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10935715 | 10935800 | 10935715 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10935527 | 10935644 | 10935527 | ID=MS.gene64074.t1.exon12;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10935527 | 10935644 | 10935527 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10934563 | 10934661 | 10934563 | ID=MS.gene64074.t1.exon13;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10934563 | 10934661 | 10934563 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10934123 | 10934480 | 10934123 | ID=MS.gene64074.t1.exon14;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10934123 | 10934480 | 10934123 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10932168 | 10933975 | 10932168 | ID=MS.gene64074.t1.exon15;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10932168 | 10933975 | 10932168 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10931408 | 10931509 | 10931408 | ID=MS.gene64074.t1.exon16;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10931408 | 10931509 | 10931408 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10928829 | 10928933 | 10928829 | ID=MS.gene64074.t1.exon17;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10928829 | 10928933 | 10928829 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10928586 | 10928660 | 10928586 | ID=MS.gene64074.t1.exon18;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10928586 | 10928660 | 10928586 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10928433 | 10928501 | 10928433 | ID=MS.gene64074.t1.exon19;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10928433 | 10928501 | 10928433 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10928246 | 10928314 | 10928246 | ID=MS.gene64074.t1.exon20;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10928246 | 10928314 | 10928246 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| chr7.4 | exon | 10926856 | 10926958 | 10926856 | ID=MS.gene64074.t1.exon21;Parent=MS.gene64074.t1 |
| chr7.4 | CDS | 10926856 | 10926958 | 10926856 | ID=cds.MS.gene64074.t1;Parent=MS.gene64074.t1 |
| Gene Sequence |
| Protein sequence |
