Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64127.t1 | XP_003615219.1 | 97.5 | 322 | 8 | 0 | 1 | 322 | 43 | 364 | 1.50E-182 | 648.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64127.t1 | Q07463 | 84.3 | 313 | 48 | 1 | 2 | 313 | 29 | 341 | 3.1e-155 | 549.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64127.t1 | G7KBE2 | 97.5 | 322 | 8 | 0 | 1 | 322 | 43 | 364 | 1.1e-182 | 648.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene64127 | MS.gene069130 | PPI |
| MS.gene64127 | MS.gene027802 | PPI |
| MS.gene64127 | MS.gene068593 | PPI |
| MS.gene070896 | MS.gene64127 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64127.t1 | MTR_5g065270 | 97.516 | 322 | 8 | 0 | 1 | 322 | 43 | 364 | 0.0 | 657 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene64127.t1 | AT3G21110 | 74.204 | 314 | 80 | 1 | 10 | 322 | 61 | 374 | 1.78e-176 | 495 |
| MS.gene64127.t1 | AT3G21110 | 74.204 | 314 | 80 | 1 | 10 | 322 | 61 | 374 | 1.78e-176 | 495 |
| MS.gene64127.t1 | AT3G21110 | 74.204 | 314 | 80 | 1 | 10 | 322 | 61 | 374 | 1.78e-176 | 495 |
Find 77 sgRNAs with CRISPR-Local
Find 387 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GCTTACTTTGCCGCGAATTT+TGG | 0.153644 | 5.1:+49958715 | None:intergenic |
| GTAGACACTAAATATGAATT+TGG | 0.160237 | 5.1:-49953919 | MS.gene64127:CDS |
| GGTGAAATTCAACCTTCTTT+TGG | 0.227916 | 5.1:-49958851 | MS.gene64127:CDS |
| GAAGTACGGATACTTCTTTA+TGG | 0.258763 | 5.1:-49954998 | MS.gene64127:CDS |
| CAAAGATCTTGTTTGTGAAT+TGG | 0.265968 | 5.1:-49953416 | MS.gene64127:CDS |
| CAATTCACAAACAAGATCTT+TGG | 0.290495 | 5.1:+49953417 | None:intergenic |
| TCACAAACCTGGCCTTTAAA+AGG | 0.310522 | 5.1:+49958370 | None:intergenic |
| TCCTTGCAGATCATAGAAAA+AGG | 0.311693 | 5.1:-49954129 | MS.gene64127:intron |
| CTCCTGATTCGAGTAGATAT+TGG | 0.315043 | 5.1:-49953751 | MS.gene64127:CDS |
| AAATATGTATGAAGTGTAAA+AGG | 0.334406 | 5.1:+49953364 | None:intergenic |
| GGTTGAATTTCACCTTGTTT+TGG | 0.355110 | 5.1:+49958860 | None:intergenic |
| TAAATTACCTCGTCTTCATA+AGG | 0.360968 | 5.1:+49953530 | None:intergenic |
| AACTCGCCTACAAACTCAAC+AGG | 0.364981 | 5.1:+49955676 | None:intergenic |
| ATCTACTCGAATCAGGAGTA+TGG | 0.368274 | 5.1:+49953756 | None:intergenic |
| TGGTCTGCAGCTTTGGTAGT+TGG | 0.371880 | 5.1:+49954801 | None:intergenic |
| TTATGGACAGTGTACAATAA+AGG | 0.374602 | 5.1:-49954981 | MS.gene64127:CDS |
| ATTTAGTGTCTACCAATATA+AGG | 0.390282 | 5.1:+49953929 | None:intergenic |
| AACGTCATGGTCTGCAGCTT+TGG | 0.395659 | 5.1:+49954794 | None:intergenic |
| TTTAGGAGTTCTTGAGGTTG+TGG | 0.398832 | 5.1:-49953571 | MS.gene64127:intron |
| CAGCAAGTGGCCTCGGACCA+CGG | 0.399678 | 5.1:-49953952 | MS.gene64127:CDS |
| TACTTGGAGCGCTTTCAAAA+TGG | 0.402478 | 5.1:-49953716 | MS.gene64127:CDS |
| AAAGCGCTCCAAGTAAGAAT+TGG | 0.405111 | 5.1:+49953724 | None:intergenic |
| ACTAGGCATCATACCTCATC+TGG | 0.405677 | 5.1:+49954762 | None:intergenic |
| GCTTTAAGGTTGTTTGAATA+CGG | 0.410229 | 5.1:-49954066 | MS.gene64127:CDS |
| TAGACACTAAATATGAATTT+GGG | 0.414632 | 5.1:-49953918 | MS.gene64127:CDS |
| TTGGATTGCCAATTCTTACT+TGG | 0.420340 | 5.1:-49953732 | MS.gene64127:CDS |
| CTCGGACCACGGCCTTATAT+TGG | 0.424336 | 5.1:-49953941 | MS.gene64127:CDS |
| ACAAGATCTTTGGGAGCATC+AGG | 0.426348 | 5.1:+49953427 | None:intergenic |
| ATCCAATATCTACTCGAATC+AGG | 0.428450 | 5.1:+49953749 | None:intergenic |
| TTCGAGATATTTATGACAGC+GGG | 0.431143 | 5.1:-49958456 | MS.gene64127:CDS |
| AATTCACAAACAAGATCTTT+GGG | 0.433274 | 5.1:+49953418 | None:intergenic |
| GGCTTTGCAGCAAGTGGCCT+CGG | 0.434789 | 5.1:-49953959 | MS.gene64127:intron |
| TGGCTTGGCGGTATGTCTAC+TGG | 0.448385 | 5.1:-49953396 | MS.gene64127:CDS |
| AAATTACCTCGTCTTCATAA+GGG | 0.456536 | 5.1:+49953531 | None:intergenic |
| AGGGAGAGTGAAATGAAGGT+TGG | 0.463801 | 5.1:+49958748 | None:intergenic |
| CGTCATTGAAGCGCGAATCA+TGG | 0.465242 | 5.1:+49958883 | None:intergenic |
| ATTAGAGAGGGAAGAAGTGA+TGG | 0.487004 | 5.1:+49958784 | None:intergenic |
| GCGGTATGTCTACTGGCCCT+TGG | 0.494982 | 5.1:-49953389 | MS.gene64127:CDS |
| ATCTTGTTTGTGAATTGGCT+TGG | 0.497027 | 5.1:-49953411 | MS.gene64127:CDS |
| GTAGCTAGAGGGTTTGTCAC+TGG | 0.517666 | 5.1:-49955020 | MS.gene64127:intron |
| AACCTGGCCTTTAAAAGGAA+TGG | 0.519246 | 5.1:+49958375 | None:intergenic |
| CATACCTCATCTGGAGTGAC+TGG | 0.522842 | 5.1:+49954771 | None:intergenic |
| CAACTCAAATCCAAAATTCG+CGG | 0.523614 | 5.1:-49958725 | MS.gene64127:CDS |
| AAGGTTGTTTGAATACGGAC+AGG | 0.523918 | 5.1:-49954061 | MS.gene64127:intron |
| TTGTTTGTGAATTGGCTTGG+CGG | 0.524028 | 5.1:-49953408 | MS.gene64127:CDS |
| AGGGTTTGTCACTGGAAGTA+CGG | 0.528413 | 5.1:-49955012 | MS.gene64127:CDS |
| TTTGCTTGTGTGTAGCTAGA+GGG | 0.529122 | 5.1:-49955031 | MS.gene64127:intron |
| TGAGCCTGAAAATGTTGATA+AGG | 0.531013 | 5.1:-49953690 | MS.gene64127:intron |
| ATCGTCAGAGTGCTTTCGAT+AGG | 0.538156 | 5.1:-49958408 | MS.gene64127:CDS |
| TCGTCAGAGTGCTTTCGATA+GGG | 0.540013 | 5.1:-49958407 | MS.gene64127:CDS |
| GAATTTGGGAAGGCAAATGA+TGG | 0.541143 | 5.1:-49953904 | MS.gene64127:CDS |
| GTTGAGGGAGAGTGAAATGA+AGG | 0.551974 | 5.1:+49958744 | None:intergenic |
| ATGAGAGTATCTCCAAAAGA+AGG | 0.573305 | 5.1:+49958839 | None:intergenic |
| TTCAGAGAGACAATTAGAGA+GGG | 0.575946 | 5.1:+49958772 | None:intergenic |
| AGTTTCTAATGCAGTTGTGT+CGG | 0.576754 | 5.1:-49955743 | MS.gene64127:CDS |
| GCTTCAATGACGCCAAAACA+AGG | 0.580999 | 5.1:-49958872 | MS.gene64127:CDS |
| TTAGAGAGGGAAGAAGTGAT+GGG | 0.581751 | 5.1:+49958785 | None:intergenic |
| ATGAAGTGTAAAAGGAGCCA+AGG | 0.587699 | 5.1:+49953372 | None:intergenic |
| TTTCAGAGAGACAATTAGAG+AGG | 0.590732 | 5.1:+49958771 | None:intergenic |
| CTGGAGTGACTGGAACGTCA+TGG | 0.598084 | 5.1:+49954781 | None:intergenic |
| TTAATGAGACAAGTCTGTGG+TGG | 0.599591 | 5.1:-49955786 | MS.gene64127:CDS |
| CGTTCCAGTCACTCCAGATG+AGG | 0.611197 | 5.1:-49954775 | MS.gene64127:intron |
| TGTCTACCAATATAAGGCCG+TGG | 0.612512 | 5.1:+49953935 | None:intergenic |
| CAATATAAGGCCGTGGTCCG+AGG | 0.612937 | 5.1:+49953942 | None:intergenic |
| CAACTGCATTAGAAACTATG+TGG | 0.624118 | 5.1:+49955749 | None:intergenic |
| CACTAAATATGAATTTGGGA+AGG | 0.627067 | 5.1:-49953914 | MS.gene64127:CDS |
| TGAAGTGTAAAAGGAGCCAA+GGG | 0.638024 | 5.1:+49953373 | None:intergenic |
| AAAGGCAATCGTAACTACTG+TGG | 0.638094 | 5.1:-49954963 | MS.gene64127:CDS |
| GATCTTTGGGAGCATCAGGA+AGG | 0.642412 | 5.1:+49953431 | None:intergenic |
| CTCGATTCTCACCATCTGGT+AGG | 0.648037 | 5.1:+49954934 | None:intergenic |
| GTTCGAGATATTTATGACAG+CGG | 0.669366 | 5.1:-49958457 | MS.gene64127:CDS |
| TGTGGAAATGTCCTACCAGA+TGG | 0.693381 | 5.1:-49954945 | MS.gene64127:intron |
| TAGAGAGGGAAGAAGTGATG+GGG | 0.705269 | 5.1:+49958786 | None:intergenic |
| TTGCAACCCTTATGAAGACG+AGG | 0.711363 | 5.1:-49953537 | MS.gene64127:intron |
| ACTCGCCTACAAACTCAACA+GGG | 0.714232 | 5.1:+49955677 | None:intergenic |
| TTCTTAATGAGACAAGTCTG+TGG | 0.716151 | 5.1:-49955789 | MS.gene64127:CDS |
| TCGAGATATTTATGACAGCG+GGG | 0.731522 | 5.1:-49958455 | MS.gene64127:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATGAATAATATTATGATAA+TGG | - | chr5.1:49957864-49957883 | MS.gene64127:intron | 10.0% |
| !! | ACAAAACAAAAAAAAAAAAA+AGG | + | chr5.1:49954207-49954226 | None:intergenic | 10.0% |
| !! | TAAATTCAGATAATTATTAA+TGG | + | chr5.1:49957042-49957061 | None:intergenic | 10.0% |
| !!! | ATGTTAATATCTTTTAATAT+TGG | - | chr5.1:49956843-49956862 | MS.gene64127:intron | 10.0% |
| !!! | CTTTTTTTGTTTAATTATTT+TGG | - | chr5.1:49956948-49956967 | MS.gene64127:intron | 10.0% |
| !! | AAAAAAAAAAAAAGGAATAG+AGG | + | chr5.1:49954199-49954218 | None:intergenic | 15.0% |
| !! | AAAAAAAAAAAAGGAATAGA+GGG | + | chr5.1:49954198-49954217 | None:intergenic | 15.0% |
| !! | AAATTGATTGACAAATTTAT+AGG | - | chr5.1:49957666-49957685 | MS.gene64127:intron | 15.0% |
| !! | AACAAATTTGAATAGAAAAA+TGG | - | chr5.1:49955273-49955292 | MS.gene64127:intron | 15.0% |
| !! | AATTGATTGACAAATTTATA+GGG | - | chr5.1:49957667-49957686 | MS.gene64127:intron | 15.0% |
| !! | ATGATGATAAAATCATAAAT+TGG | - | chr5.1:49954709-49954728 | MS.gene64127:intron | 15.0% |
| !! | ATTAAAGAATGATTCTTATA+AGG | + | chr5.1:49953567-49953586 | None:intergenic | 15.0% |
| !! | GAAATTATGTTAAAAACTAT+AGG | + | chr5.1:49956648-49956667 | None:intergenic | 15.0% |
| !! | GATATATTAATTGATACTTT+GGG | - | chr5.1:49955403-49955422 | MS.gene64127:intron | 15.0% |
| !! | TAAGTATATAAATGTGATAA+CGG | - | chr5.1:49958425-49958444 | MS.gene64127:CDS | 15.0% |
| !! | TTAGAAATTCTAGATATAAT+TGG | + | chr5.1:49954386-49954405 | None:intergenic | 15.0% |
| !! | TTTGTTTAAATTTGATAGAT+TGG | - | chr5.1:49955381-49955400 | MS.gene64127:intron | 15.0% |
| !!! | AATTTATGATTTTATCATCA+TGG | + | chr5.1:49954710-49954729 | None:intergenic | 15.0% |
| !!! | AATTTTCTGATAATAATCAT+GGG | + | chr5.1:49957967-49957986 | None:intergenic | 15.0% |
| !!! | ATAAAAAAAAGTACGATAAA+TGG | + | chr5.1:49956187-49956206 | None:intergenic | 15.0% |
| !!! | ATTTATGATTTTATCATCAT+GGG | + | chr5.1:49954709-49954728 | None:intergenic | 15.0% |
| !!! | ATTTATGTATTGACAATTAT+TGG | - | chr5.1:49954507-49954526 | MS.gene64127:intron | 15.0% |
| !!! | TATTAATGTTATGCTTTTTT+AGG | - | chr5.1:49958638-49958657 | MS.gene64127:intron | 15.0% |
| !!! | TTTATGTATTGACAATTATT+GGG | - | chr5.1:49954508-49954527 | MS.gene64127:intron | 15.0% |
| !!! | TTTTAATTTCAAAGAAGAAA+AGG | + | chr5.1:49957089-49957108 | None:intergenic | 15.0% |
| !! | AAATATGTATGAAGTGTAAA+AGG | + | chr5.1:49958865-49958884 | None:intergenic | 20.0% |
| !! | AACGATTAATGATTAAATGA+AGG | + | chr5.1:49954297-49954316 | None:intergenic | 20.0% |
| !! | AATAAAATTGGAATTTGAAG+AGG | - | chr5.1:49956680-49956699 | MS.gene64127:intron | 20.0% |
| !! | ACGATTAATGATTAAATGAA+GGG | + | chr5.1:49954296-49954315 | None:intergenic | 20.0% |
| !! | GACAAAAAAATTGAAATAGA+GGG | - | chr5.1:49954443-49954462 | MS.gene64127:intron | 20.0% |
| !! | GGATATATTAATTGATACTT+TGG | - | chr5.1:49955402-49955421 | MS.gene64127:intron | 20.0% |
| !! | TAGACACTAAATATGAATTT+GGG | - | chr5.1:49958308-49958327 | MS.gene64127:intron | 20.0% |
| !! | TGGGAAAATAAGATAATATA+TGG | - | chr5.1:49956904-49956923 | MS.gene64127:intron | 20.0% |
| !! | TGTTGTATATTTAGTAGTTT+GGG | - | chr5.1:49956234-49956253 | MS.gene64127:intron | 20.0% |
| !! | TTGTTGTATATTTAGTAGTT+TGG | - | chr5.1:49956233-49956252 | MS.gene64127:intron | 20.0% |
| !! | TTTATTTACAGAGAGTTAAA+GGG | - | chr5.1:49953895-49953914 | MS.gene64127:CDS | 20.0% |
| !!! | AAAAGCATAACATTAATAGA+TGG | + | chr5.1:49958636-49958655 | None:intergenic | 20.0% |
| !!! | ATATATTATCTTATTTTCCC+AGG | + | chr5.1:49956905-49956924 | None:intergenic | 20.0% |
| !!! | ATATGAGTTGATTTTTCTTT+AGG | - | chr5.1:49958771-49958790 | MS.gene64127:CDS | 20.0% |
| !!! | GAATTTTCTGATAATAATCA+TGG | + | chr5.1:49957968-49957987 | None:intergenic | 20.0% |
| !!! | TTATGTATTGACAATTATTG+GGG | - | chr5.1:49954509-49954528 | MS.gene64127:intron | 20.0% |
| !!! | TTTATCTGTTTTAAGACAAT+GGG | + | chr5.1:49954413-49954432 | None:intergenic | 20.0% |
| !!! | TTTTATCTGTTTTAAGACAA+TGG | + | chr5.1:49954414-49954433 | None:intergenic | 20.0% |
| !!! | TTTTTTCAAAATGATATCCT+GGG | - | chr5.1:49956885-49956904 | MS.gene64127:intron | 20.0% |
| !!! | TTTTTTTCAAAATGATATCC+TGG | - | chr5.1:49956884-49956903 | MS.gene64127:intron | 20.0% |
| ! | AAATAAGATAATATATGGCC+TGG | - | chr5.1:49956909-49956928 | MS.gene64127:intron | 25.0% |
| ! | AACGACTAAACCAATATTTA+AGG | + | chr5.1:49956982-49957001 | None:intergenic | 25.0% |
| ! | AATTCACAAACAAGATCTTT+GGG | + | chr5.1:49958811-49958830 | None:intergenic | 25.0% |
| ! | AATTTCGAGATAAAACAATC+AGG | + | chr5.1:49956412-49956431 | None:intergenic | 25.0% |
| ! | ACATAGAGGAAGTTAAAATT+TGG | + | chr5.1:49958071-49958090 | None:intergenic | 25.0% |
| ! | AGATGATGTATATGAAACAT+GGG | - | chr5.1:49955440-49955459 | MS.gene64127:intron | 25.0% |
| ! | ATAGGATATTATCATATGAC+AGG | - | chr5.1:49957362-49957381 | MS.gene64127:intron | 25.0% |
| ! | ATATTATCATATGACAGGAA+TGG | - | chr5.1:49957367-49957386 | MS.gene64127:intron | 25.0% |
| ! | ATGATAATATCCTATTACAC+AGG | + | chr5.1:49957357-49957376 | None:intergenic | 25.0% |
| ! | ATTTAGTGTCTACCAATATA+AGG | + | chr5.1:49958300-49958319 | None:intergenic | 25.0% |
| ! | CAAGTAGAAAAAGTAAAACT+AGG | + | chr5.1:49957484-49957503 | None:intergenic | 25.0% |
| ! | CAATGCAAATAAAAAGCAAT+GGG | + | chr5.1:49956312-49956331 | None:intergenic | 25.0% |
| ! | CGACAAAAAAATTGAAATAG+AGG | - | chr5.1:49954442-49954461 | MS.gene64127:intron | 25.0% |
| ! | CTAAAATTGATTACACGAAT+TGG | + | chr5.1:49953977-49953996 | None:intergenic | 25.0% |
| ! | GAAAACAGATGATTGAAATA+TGG | + | chr5.1:49953543-49953562 | None:intergenic | 25.0% |
| ! | GCGTAATTGAATTTCTTATT+AGG | - | chr5.1:49956780-49956799 | MS.gene64127:intron | 25.0% |
| ! | GGTAATATGCTTATTAGTAT+AGG | - | chr5.1:49958186-49958205 | MS.gene64127:intron | 25.0% |
| ! | GTAGACACTAAATATGAATT+TGG | - | chr5.1:49958307-49958326 | MS.gene64127:intron | 25.0% |
| ! | GTTTATTTACAGAGAGTTAA+AGG | - | chr5.1:49953894-49953913 | MS.gene64127:CDS | 25.0% |
| ! | TAATCTATGTAAAACAGTTG+CGG | - | chr5.1:49957013-49957032 | MS.gene64127:intron | 25.0% |
| ! | TAGCTTAATCAATGTAATGT+TGG | - | chr5.1:49953743-49953762 | MS.gene64127:CDS | 25.0% |
| ! | TATGAATCTCAAATATGATC+CGG | + | chr5.1:49953721-49953740 | None:intergenic | 25.0% |
| ! | TCATTCAGTATCAATCTATT+AGG | - | chr5.1:49954825-49954844 | MS.gene64127:CDS | 25.0% |
| ! | TCATTCAGTATCATTCTATT+AGG | - | chr5.1:49956043-49956062 | MS.gene64127:intron | 25.0% |
| ! | TGAACAAAGAAAGAAAATGT+TGG | - | chr5.1:49957547-49957566 | MS.gene64127:intron | 25.0% |
| ! | TGACAAATTTATAGGGATAA+GGG | - | chr5.1:49957674-49957693 | MS.gene64127:intron | 25.0% |
| ! | TGATAATATCCTATTACACA+GGG | + | chr5.1:49957356-49957375 | None:intergenic | 25.0% |
| ! | TTATGTTGGTATATGATAGA+GGG | - | chr5.1:49955725-49955744 | MS.gene64127:CDS | 25.0% |
| ! | TTGACAAATTTATAGGGATA+AGG | - | chr5.1:49957673-49957692 | MS.gene64127:intron | 25.0% |
| ! | TTTAAACTCTTGTTAGCAAA+TGG | - | chr5.1:49954087-49954106 | MS.gene64127:CDS | 25.0% |
| !! | AAATTTGGCTCAAAATCATT+TGG | - | chr5.1:49955695-49955714 | MS.gene64127:CDS | 25.0% |
| !! | AATCTATGGATTGCTTAATT+TGG | - | chr5.1:49955657-49955676 | MS.gene64127:intron | 25.0% |
| !! | AATTTGGCTCAAAATCATTT+GGG | - | chr5.1:49955696-49955715 | MS.gene64127:CDS | 25.0% |
| !! | ATGGATTTACTTGTTAAAGT+CGG | - | chr5.1:49957883-49957902 | MS.gene64127:intron | 25.0% |
| !! | ATTAAGTTGTTTATTCGAAC+CGG | - | chr5.1:49953699-49953718 | MS.gene64127:CDS | 25.0% |
| !! | TACATCAATCAAATGCTTTT+TGG | + | chr5.1:49954257-49954276 | None:intergenic | 25.0% |
| !! | TATATGATAGAGGGAAATTT+TGG | - | chr5.1:49955734-49955753 | MS.gene64127:CDS | 25.0% |
| !! | TTAATTTGGTATATGACAGA+GGG | - | chr5.1:49955671-49955690 | MS.gene64127:intron | 25.0% |
| !! | TTTTACACCGACATTTAATA+AGG | - | chr5.1:49953938-49953957 | MS.gene64127:CDS | 25.0% |
| !!! | ATCAATTTTGTTGATTGATG+AGG | - | chr5.1:49958345-49958364 | MS.gene64127:intron | 25.0% |
| !!! | ATTATTGATTGATGATGCAA+TGG | + | chr5.1:49956155-49956174 | None:intergenic | 25.0% |
| !!! | TGTTTTAAAAGCAGAAGTTT+AGG | - | chr5.1:49957144-49957163 | MS.gene64127:intron | 25.0% |
| AAATTACCTCGTCTTCATAA+GGG | + | chr5.1:49958698-49958717 | None:intergenic | 30.0% | |
| AATAATCATGGGAACATCAT+AGG | + | chr5.1:49957956-49957975 | None:intergenic | 30.0% | |
| AATGATATCCTTGTACTCAT+TGG | - | chr5.1:49955549-49955568 | MS.gene64127:intron | 30.0% | |
| ACAAGCAAAATATGTGTCAA+TGG | + | chr5.1:49957184-49957203 | None:intergenic | 30.0% | |
| AGCAATCCATAGATTAAAAG+CGG | + | chr5.1:49955652-49955671 | None:intergenic | 30.0% | |
| AGCAGGAAACTAAATAGATA+AGG | + | chr5.1:49957701-49957720 | None:intergenic | 30.0% | |
| AGTATAAGAGGTTTATAGGA+GGG | - | chr5.1:49956010-49956029 | MS.gene64127:intron | 30.0% | |
| AGTGAGTCCTTATTAAATGT+CGG | + | chr5.1:49953948-49953967 | None:intergenic | 30.0% | |
| ATACACTTATAAGAGTGAGA+TGG | - | chr5.1:49953997-49954016 | MS.gene64127:intron | 30.0% | |
| ATATGATAGTAGTGTCAGAA+TGG | - | chr5.1:49954578-49954597 | MS.gene64127:intron | 30.0% | |
| ATCATAAATTGGAGAGTAAG+TGG | - | chr5.1:49954720-49954739 | MS.gene64127:intron | 30.0% | |
| CAAATAACAACTCTCTGTAT+TGG | + | chr5.1:49956581-49956600 | None:intergenic | 30.0% | |
| CAAGCAAAATATGTGTCAAT+GGG | + | chr5.1:49957183-49957202 | None:intergenic | 30.0% | |
| CAATTCACAAACAAGATCTT+TGG | + | chr5.1:49958812-49958831 | None:intergenic | 30.0% | |
| CACTAAATATGAATTTGGGA+AGG | - | chr5.1:49958312-49958331 | MS.gene64127:intron | 30.0% | |
| CCAAAAAAAACCTAGCTAAA+TGG | + | chr5.1:49957610-49957629 | None:intergenic | 30.0% | |
| CCAATGCAAATAAAAAGCAA+TGG | + | chr5.1:49956313-49956332 | None:intergenic | 30.0% | |
| CTTATGTTGGTATATGATAG+AGG | - | chr5.1:49955724-49955743 | MS.gene64127:CDS | 30.0% | |
| CTTATTGTTGAGAAACGTTT+GGG | - | chr5.1:49954851-49954870 | MS.gene64127:intron | 30.0% | |
| GAAAATCATTTCTACCTGTT+TGG | - | chr5.1:49956354-49956373 | MS.gene64127:intron | 30.0% | |
| GAGATGATGTATATGAAACA+TGG | - | chr5.1:49955439-49955458 | MS.gene64127:intron | 30.0% | |
| GCTTGACTTTACAATTTGAT+TGG | - | chr5.1:49958246-49958265 | MS.gene64127:intron | 30.0% | |
| GTAAAGTCAAGCATACAATA+AGG | + | chr5.1:49958238-49958257 | None:intergenic | 30.0% | |
| TAAATTACCTCGTCTTCATA+AGG | + | chr5.1:49958699-49958718 | None:intergenic | 30.0% | |
| TATATGACAGAGGGAAAATT+TGG | - | chr5.1:49955680-49955699 | MS.gene64127:intron | 30.0% | |
| TCATTCTATTAGGAACCTTA+CGG | - | chr5.1:49956053-49956072 | MS.gene64127:intron | 30.0% | |
| TTAATCAATGTAATGTTGGC+AGG | - | chr5.1:49953747-49953766 | MS.gene64127:CDS | 30.0% | |
| TTATGGACAGTGTACAATAA+AGG | - | chr5.1:49957245-49957264 | MS.gene64127:intron | 30.0% | |
| ! | AACACCTTATCAACATTTTC+AGG | + | chr5.1:49958543-49958562 | None:intergenic | 30.0% |
| ! | AAGGATCTGCTATTTAAAAG+GGG | + | chr5.1:49957724-49957743 | None:intergenic | 30.0% |
| ! | ACAAGGATCTGCTATTTAAA+AGG | + | chr5.1:49957726-49957745 | None:intergenic | 30.0% |
| ! | AGTGTAAAACTGGTTTACTT+TGG | - | chr5.1:49954052-49954071 | MS.gene64127:intron | 30.0% |
| ! | ATTCTGTATTTTGCATAGTG+AGG | - | chr5.1:49954621-49954640 | MS.gene64127:intron | 30.0% |
| ! | CAAAGATCTTGTTTGTGAAT+TGG | - | chr5.1:49958810-49958829 | MS.gene64127:CDS | 30.0% |
| ! | CAAGGATCTGCTATTTAAAA+GGG | + | chr5.1:49957725-49957744 | None:intergenic | 30.0% |
| ! | CTTAATTTGGTATATGACAG+AGG | - | chr5.1:49955670-49955689 | MS.gene64127:intron | 30.0% |
| ! | GCTATTGTCACATTTTTATC+TGG | + | chr5.1:49956511-49956530 | None:intergenic | 30.0% |
| ! | TAGAGATTTAGTGGATACAT+TGG | - | chr5.1:49958607-49958626 | MS.gene64127:intron | 30.0% |
| ! | TGCGAAAAGTTATCCATTTT+TGG | + | chr5.1:49958036-49958055 | None:intergenic | 30.0% |
| ! | TGGATTTACTTGTTAAAGTC+GGG | - | chr5.1:49957884-49957903 | MS.gene64127:intron | 30.0% |
| ! | TTGCTAGTTTAGAGATTTAG+TGG | - | chr5.1:49958598-49958617 | MS.gene64127:intron | 30.0% |
| !! | AGAAATCCGCTTTTAATCTA+TGG | - | chr5.1:49955643-49955662 | MS.gene64127:intron | 30.0% |
| !! | AGTAGTCATATTTTAAGCGT+TGG | + | chr5.1:49954337-49954356 | None:intergenic | 30.0% |
| !! | GCTTTAAGGTTGTTTGAATA+CGG | - | chr5.1:49958160-49958179 | MS.gene64127:intron | 30.0% |
| !! | GGAAGAGTATCCTTAAATAT+TGG | - | chr5.1:49956969-49956988 | MS.gene64127:intron | 30.0% |
| !! | TTGTTTTATCTCGAAATTGC+AGG | - | chr5.1:49956414-49956433 | MS.gene64127:intron | 30.0% |
| !!! | ACAGTTTTTTATGTAGTGAG+TGG | - | chr5.1:49956709-49956728 | MS.gene64127:intron | 30.0% |
| !!! | AGTTTTTTATGTAGTGAGTG+GGG | - | chr5.1:49956711-49956730 | MS.gene64127:intron | 30.0% |
| !!! | CAGTTTTTTATGTAGTGAGT+GGG | - | chr5.1:49956710-49956729 | MS.gene64127:intron | 30.0% |
| !!! | CCATTGCTTTTTATTTGCAT+TGG | - | chr5.1:49956310-49956329 | MS.gene64127:intron | 30.0% |
| !!! | CCATTTAGCTAGGTTTTTTT+TGG | - | chr5.1:49957607-49957626 | MS.gene64127:intron | 30.0% |
| !!! | GAATTTTGGATTTGAGTTGA+GGG | + | chr5.1:49953500-49953519 | None:intergenic | 30.0% |
| AAGCGAGTGAAAAAGCTTTA+AGG | - | chr5.1:49958146-49958165 | MS.gene64127:intron | 35.0% | |
| ACAAAATGGGACAAAACTCT+TGG | - | chr5.1:49955188-49955207 | MS.gene64127:intron | 35.0% | |
| AGGGAAGAACAATACTCTTA+TGG | - | chr5.1:49955594-49955613 | MS.gene64127:intron | 35.0% | |
| AGGTTTATAGGAGGGAAAAA+GGG | - | chr5.1:49956018-49956037 | MS.gene64127:intron | 35.0% | |
| AGTTTCTAATGCAGTTGTGT+CGG | - | chr5.1:49956483-49956502 | MS.gene64127:intron | 35.0% | |
| ATAGTAACCATCAACCAAAC+AGG | + | chr5.1:49956371-49956390 | None:intergenic | 35.0% | |
| ATCCAATATCTACTCGAATC+AGG | + | chr5.1:49958480-49958499 | None:intergenic | 35.0% | |
| ATCGGATGTTAGTGTAAAAC+TGG | - | chr5.1:49954042-49954061 | MS.gene64127:intron | 35.0% | |
| ATGCAATCTTTGATACACCT+TGG | - | chr5.1:49958372-49958391 | MS.gene64127:intron | 35.0% | |
| ATTCATTAATTCTGCTGACC+AGG | + | chr5.1:49957851-49957870 | None:intergenic | 35.0% | |
| ATTGGTTATGACCAGACAAT+GGG | - | chr5.1:49955567-49955586 | MS.gene64127:intron | 35.0% | |
| ATTTCTACCTGTTTGGTTGA+TGG | - | chr5.1:49956361-49956380 | MS.gene64127:intron | 35.0% | |
| CAAAATGGGACAAAACTCTT+GGG | - | chr5.1:49955189-49955208 | MS.gene64127:intron | 35.0% | |
| CAAATTGCGTGACTATTATG+TGG | - | chr5.1:49955108-49955127 | MS.gene64127:intron | 35.0% | |
| CAACTCAAATCCAAAATTCG+CGG | - | chr5.1:49953501-49953520 | MS.gene64127:intron | 35.0% | |
| CAACTGCATTAGAAACTATG+TGG | + | chr5.1:49956480-49956499 | None:intergenic | 35.0% | |
| CATATACATCATCTCAACCA+AGG | + | chr5.1:49955434-49955453 | None:intergenic | 35.0% | |
| CATCACAGTGAGTTATACAA+AGG | + | chr5.1:49954126-49954145 | None:intergenic | 35.0% | |
| CATTTCTCAAGCAAACTGAA+GGG | - | chr5.1:49955820-49955839 | MS.gene64127:intron | 35.0% | |
| CCAAACGTTTCTCAACAATA+AGG | + | chr5.1:49954853-49954872 | None:intergenic | 35.0% | |
| CCTTATTGTTGAGAAACGTT+TGG | - | chr5.1:49954850-49954869 | MS.gene64127:intron | 35.0% | |
| CTATTACTCTTCTTGTTGCT+AGG | + | chr5.1:49955849-49955868 | None:intergenic | 35.0% | |
| CTTTGTATAACTCACTGTGA+TGG | - | chr5.1:49954124-49954143 | MS.gene64127:intron | 35.0% | |
| GAAGAACAATACTCTTATGG+TGG | - | chr5.1:49955597-49955616 | MS.gene64127:intron | 35.0% | |
| GAAGTACGGATACTTCTTTA+TGG | - | chr5.1:49957228-49957247 | MS.gene64127:intron | 35.0% | |
| GAATCCATTAGAAGAACTCA+CGG | - | chr5.1:49954940-49954959 | MS.gene64127:intron | 35.0% | |
| GAGTATAAGAGGTTTATAGG+AGG | - | chr5.1:49956009-49956028 | MS.gene64127:intron | 35.0% | |
| GATGAAAAGAATCACAAACC+TGG | + | chr5.1:49953870-49953889 | None:intergenic | 35.0% | |
| GCTACACAATAATCCATTAG+CGG | + | chr5.1:49958731-49958750 | None:intergenic | 35.0% | |
| GGAAAACAGCTAGATAGTAT+TGG | - | chr5.1:49954145-49954164 | MS.gene64127:intron | 35.0% | |
| GTTCGAGATATTTATGACAG+CGG | - | chr5.1:49953769-49953788 | MS.gene64127:intron | 35.0% | |
| TAAAAACAACCTTGTCCTCA+AGG | + | chr5.1:49955885-49955904 | None:intergenic | 35.0% | |
| TAATATCCTATTACACAGGG+CGG | + | chr5.1:49957353-49957372 | None:intergenic | 35.0% | |
| TAGACAGAAAAGCAGAGAAT+AGG | - | chr5.1:49957573-49957592 | MS.gene64127:intron | 35.0% | |
| TATTAGGAACCTTACGGTTT+AGG | - | chr5.1:49956059-49956078 | MS.gene64127:intron | 35.0% | |
| TCAAATAGAGGTTGTAGCAA+TGG | - | chr5.1:49955316-49955335 | MS.gene64127:intron | 35.0% | |
| TCATTTCTCAAGCAAACTGA+AGG | - | chr5.1:49955819-49955838 | MS.gene64127:intron | 35.0% | |
| TCCAGATCGCATTACAAAAT+GGG | - | chr5.1:49955175-49955194 | MS.gene64127:intron | 35.0% | |
| TCCTTGCAGATCATAGAAAA+AGG | - | chr5.1:49958097-49958116 | MS.gene64127:intron | 35.0% | |
| TGAGCCTGAAAATGTTGATA+AGG | - | chr5.1:49958536-49958555 | MS.gene64127:intron | 35.0% | |
| TTATCGGAACAACAACGTTT+GGG | - | chr5.1:49955034-49955053 | MS.gene64127:intron | 35.0% | |
| TTCAGAGAGACAATTAGAGA+GGG | + | chr5.1:49953457-49953476 | None:intergenic | 35.0% | |
| TTCGAGATATTTATGACAGC+GGG | - | chr5.1:49953770-49953789 | MS.gene64127:intron | 35.0% | |
| TTCTTAATGAGACAAGTCTG+TGG | - | chr5.1:49956437-49956456 | MS.gene64127:intron | 35.0% | |
| TTGGATTGCCAATTCTTACT+TGG | - | chr5.1:49958494-49958513 | MS.gene64127:intron | 35.0% | |
| TTTACATTCTCTACCGCTAA+TGG | - | chr5.1:49958715-49958734 | MS.gene64127:intron | 35.0% | |
| TTTATCGGAACAACAACGTT+TGG | - | chr5.1:49955033-49955052 | MS.gene64127:intron | 35.0% | |
| TTTCAGAGAGACAATTAGAG+AGG | + | chr5.1:49953458-49953477 | None:intergenic | 35.0% | |
| ! | AAGTTGGGCTTTTATCATCA+CGG | + | chr5.1:49955929-49955948 | None:intergenic | 35.0% |
| ! | AGGGAGTATAAGAGGTTTAT+AGG | - | chr5.1:49956006-49956025 | MS.gene64127:intron | 35.0% |
| ! | ATCTTGTTTGTGAATTGGCT+TGG | - | chr5.1:49958815-49958834 | MS.gene64127:CDS | 35.0% |
| ! | CTTGCTTCCATTCCTTTTAA+AGG | - | chr5.1:49953844-49953863 | MS.gene64127:intron | 35.0% |
| ! | GGTGAAATTCAACCTTCTTT+TGG | - | chr5.1:49953375-49953394 | MS.gene64127:CDS | 35.0% |
| ! | GTAAAACAATGGACTCTCAT+CGG | - | chr5.1:49954024-49954043 | MS.gene64127:intron | 35.0% |
| ! | GTAGAAATGATTTTCCACAC+AGG | + | chr5.1:49956349-49956368 | None:intergenic | 35.0% |
| ! | TCCTTTTTCTATGATCTGCA+AGG | + | chr5.1:49958101-49958120 | None:intergenic | 35.0% |
| ! | TGTATTGCTGTATTTTCCGT+GGG | - | chr5.1:49954648-49954667 | MS.gene64127:intron | 35.0% |
| !! | AATTTTGGTCCTCAAGCATT+TGG | - | chr5.1:49955749-49955768 | MS.gene64127:CDS | 35.0% |
| !! | ATAAGAGTATTGTTCTTCCC+TGG | + | chr5.1:49955595-49955614 | None:intergenic | 35.0% |
| !! | ATGAGAGTATCTCCAAAAGA+AGG | + | chr5.1:49953390-49953409 | None:intergenic | 35.0% |
| !! | ATGCCTTCTTTTAGTTAGTG+AGG | - | chr5.1:49957995-49958014 | MS.gene64127:intron | 35.0% |
| !! | ATTTTGGTCCTCAAGCATTT+GGG | - | chr5.1:49955750-49955769 | MS.gene64127:CDS | 35.0% |
| !! | GACGTCATTTTCTTTCAGAT+TGG | - | chr5.1:49957757-49957776 | MS.gene64127:intron | 35.0% |
| !! | GATGTCTGCTTTTCAAATAG+AGG | - | chr5.1:49955304-49955323 | MS.gene64127:intron | 35.0% |
| !! | GGTTGAATTTCACCTTGTTT+TGG | + | chr5.1:49953369-49953388 | None:intergenic | 35.0% |
| !! | TGATACTGGTCTTCCAAAAA+TGG | - | chr5.1:49958020-49958039 | MS.gene64127:intron | 35.0% |
| !!! | CGAATTTTGGATTTGAGTTG+AGG | + | chr5.1:49953501-49953520 | None:intergenic | 35.0% |
| !!! | TGAGGACAAGGTTGTTTTTA+AGG | - | chr5.1:49955885-49955904 | MS.gene64127:intron | 35.0% |
| !!! | TGCTTTTTTAGGAGTTCTTG+AGG | - | chr5.1:49958649-49958668 | MS.gene64127:intron | 35.0% |
| AAAGGCAATCGTAACTACTG+TGG | - | chr5.1:49957263-49957282 | MS.gene64127:intron | 40.0% | |
| AAATCTCGATTCTCACCATC+TGG | + | chr5.1:49957299-49957318 | None:intergenic | 40.0% | |
| AAATTACCGCCCTGTGTAAT+AGG | - | chr5.1:49957344-49957363 | MS.gene64127:intron | 40.0% | |
| AAGCCATTGAGAGGAATCTA+TGG | - | chr5.1:49955496-49955515 | MS.gene64127:intron | 40.0% | |
| AAGGTTGTTTGAATACGGAC+AGG | - | chr5.1:49958165-49958184 | MS.gene64127:intron | 40.0% | |
| AAGTTAGTTAGAGAGTGGAG+GGG | - | chr5.1:49954752-49954771 | MS.gene64127:intron | 40.0% | |
| AATAGAGGTTGTAGCAATGG+AGG | - | chr5.1:49955319-49955338 | MS.gene64127:intron | 40.0% | |
| ACGCCTCACTAACTAAAAGA+AGG | + | chr5.1:49958001-49958020 | None:intergenic | 40.0% | |
| ACGTGTAGAAGCAAATCTCA+AGG | - | chr5.1:49954874-49954893 | MS.gene64127:intron | 40.0% | |
| AGAAACCATTTCCAACCTTG+AGG | - | chr5.1:49955867-49955886 | MS.gene64127:intron | 40.0% | |
| AGAGAAATGTCTCTTCTCTG+AGG | - | chr5.1:49956085-49956104 | MS.gene64127:intron | 40.0% | |
| AGCCATTGAGAGGAATCTAT+GGG | - | chr5.1:49955497-49955516 | MS.gene64127:intron | 40.0% | |
| AGGCATGCAAATGCTAATGT+CGG | - | chr5.1:49956800-49956819 | MS.gene64127:intron | 40.0% | |
| AGTATAAGAGGTCTGTAGGA+GGG | - | chr5.1:49954792-49954811 | MS.gene64127:CDS | 40.0% | |
| ATAGAGGGAGTAGAACTATC+AGG | - | chr5.1:49954458-49954477 | MS.gene64127:intron | 40.0% | |
| ATCTACTCGAATCAGGAGTA+TGG | + | chr5.1:49958473-49958492 | None:intergenic | 40.0% | |
| ATGAAGTGTAAAAGGAGCCA+AGG | + | chr5.1:49958857-49958876 | None:intergenic | 40.0% | |
| ATGATCAGTGATTCTGAACC+TGG | - | chr5.1:49957830-49957849 | MS.gene64127:intron | 40.0% | |
| ATTAGAGAGGGAAGAAGTGA+TGG | + | chr5.1:49953445-49953464 | None:intergenic | 40.0% | |
| CAAGTTAGTTAGAGAGTGGA+GGG | - | chr5.1:49954751-49954770 | MS.gene64127:intron | 40.0% | |
| CAATTTGAACATGCGAACAC+GGG | + | chr5.1:49955095-49955114 | None:intergenic | 40.0% | |
| CACACTGGGAAGAGTAAAAT+TGG | + | chr5.1:49955009-49955028 | None:intergenic | 40.0% | |
| CGTGTAGAAGCAAATCTCAA+GGG | - | chr5.1:49954875-49954894 | MS.gene64127:intron | 40.0% | |
| CTACCTCGTAAGTTGCTAAA+AGG | - | chr5.1:49957908-49957927 | MS.gene64127:intron | 40.0% | |
| CTCCAGATCGCATTACAAAA+TGG | - | chr5.1:49955174-49955193 | MS.gene64127:intron | 40.0% | |
| CTTATAAGAGTGAGATGGTG+TGG | - | chr5.1:49954002-49954021 | MS.gene64127:intron | 40.0% | |
| GAATTTGGGAAGGCAAATGA+TGG | - | chr5.1:49958322-49958341 | MS.gene64127:intron | 40.0% | |
| GAGATGGTGTGGTAAAACAA+TGG | - | chr5.1:49954013-49954032 | MS.gene64127:intron | 40.0% | |
| GAGGTTTATAGGAGGGAAAA+AGG | - | chr5.1:49956017-49956036 | MS.gene64127:intron | 40.0% | |
| GATGTATATGAAACATGGGC+TGG | - | chr5.1:49955444-49955463 | MS.gene64127:intron | 40.0% | |
| GCAATTTGAACATGCGAACA+CGG | + | chr5.1:49955096-49955115 | None:intergenic | 40.0% | |
| GGTCATAACCAATGAGTACA+AGG | + | chr5.1:49955560-49955579 | None:intergenic | 40.0% | |
| GGTTCTATGTTCCTAACTAC+AGG | - | chr5.1:49958446-49958465 | MS.gene64127:CDS | 40.0% | |
| GTCTTCTTTCAAAACCTGTG+TGG | - | chr5.1:49956332-49956351 | MS.gene64127:intron | 40.0% | |
| GTGATGATAAAAGCCCAACT+TGG | - | chr5.1:49955928-49955947 | MS.gene64127:intron | 40.0% | |
| GTGGTTGCTGAATATGAACA+TGG | - | chr5.1:49955616-49955635 | MS.gene64127:intron | 40.0% | |
| TCAAGTCATTGAAGACACTC+AGG | + | chr5.1:49955792-49955811 | None:intergenic | 40.0% | |
| TCGAGATATTTATGACAGCG+GGG | - | chr5.1:49953771-49953790 | MS.gene64127:intron | 40.0% | |
| TGAAGTGTAAAAGGAGCCAA+GGG | + | chr5.1:49958856-49958875 | None:intergenic | 40.0% | |
| TGATAGTAGTGTCAGAATGG+AGG | - | chr5.1:49954581-49954600 | MS.gene64127:intron | 40.0% | |
| TGCAAGGAAATGCAACATAG+AGG | + | chr5.1:49958085-49958104 | None:intergenic | 40.0% | |
| TGGGGATTAGAGCTTTCTTA+TGG | - | chr5.1:49956729-49956748 | MS.gene64127:intron | 40.0% | |
| TTAATGAGACAAGTCTGTGG+TGG | - | chr5.1:49956440-49956459 | MS.gene64127:intron | 40.0% | |
| TTACACTTCCTCTCCAAGTT+GGG | + | chr5.1:49955944-49955963 | None:intergenic | 40.0% | |
| TTAGAGAGGGAAGAAGTGAT+GGG | + | chr5.1:49953444-49953463 | None:intergenic | 40.0% | |
| TTCCCAGTGTGAACGTTTAT+CGG | - | chr5.1:49955018-49955037 | MS.gene64127:CDS | 40.0% | |
| TTCCCATAGATTCCTCTCAA+TGG | + | chr5.1:49955502-49955521 | None:intergenic | 40.0% | |
| TTCCGATAAACGTTCACACT+GGG | + | chr5.1:49955023-49955042 | None:intergenic | 40.0% | |
| TTGCTGAATATGAACATGGC+TGG | - | chr5.1:49955620-49955639 | MS.gene64127:intron | 40.0% | |
| TTTAGGAGTTCTTGAGGTTG+TGG | - | chr5.1:49958655-49958674 | MS.gene64127:intron | 40.0% | |
| TTTGCTTGTGTGTAGCTAGA+GGG | - | chr5.1:49957195-49957214 | MS.gene64127:intron | 40.0% | |
| ! | AAAGCGCTCCAAGTAAGAAT+TGG | + | chr5.1:49958505-49958524 | None:intergenic | 40.0% |
| ! | AACCTGGCCTTTAAAAGGAA+TGG | + | chr5.1:49953854-49953873 | None:intergenic | 40.0% |
| ! | AGTTGGGCTTTTATCATCAC+GGG | + | chr5.1:49955928-49955947 | None:intergenic | 40.0% |
| ! | CATTGGTTATGACCAGACAA+TGG | - | chr5.1:49955566-49955585 | MS.gene64127:intron | 40.0% |
| ! | CTACCTTTTAGCAACTTACG+AGG | + | chr5.1:49957914-49957933 | None:intergenic | 40.0% |
| ! | CTCCTGATTCGAGTAGATAT+TGG | - | chr5.1:49958475-49958494 | MS.gene64127:intron | 40.0% |
| ! | CTGTATTGCTGTATTTTCCG+TGG | - | chr5.1:49954647-49954666 | MS.gene64127:intron | 40.0% |
| ! | CTTTTAGCAACTTACGAGGT+AGG | + | chr5.1:49957910-49957929 | None:intergenic | 40.0% |
| ! | GACTACTCTAAGAGCATAGT+TGG | - | chr5.1:49954350-49954369 | MS.gene64127:intron | 40.0% |
| ! | GTATTGCTGTATTTTCCGTG+GGG | - | chr5.1:49954649-49954668 | MS.gene64127:intron | 40.0% |
| ! | GTTTTCCCTGTTGAGTTTGT+AGG | - | chr5.1:49956544-49956563 | MS.gene64127:intron | 40.0% |
| ! | TACTTGGAGCGCTTTCAAAA+TGG | - | chr5.1:49958510-49958529 | MS.gene64127:intron | 40.0% |
| ! | TATTGCTGTATTTTCCGTGG+GGG | - | chr5.1:49954650-49954669 | MS.gene64127:intron | 40.0% |
| ! | TCACAAACCTGGCCTTTAAA+AGG | + | chr5.1:49953859-49953878 | None:intergenic | 40.0% |
| ! | TCCCATTTTGTAATGCGATC+TGG | + | chr5.1:49955179-49955198 | None:intergenic | 40.0% |
| ! | TGATACTTTGGGAACTACCT+TGG | - | chr5.1:49955414-49955433 | MS.gene64127:intron | 40.0% |
| ! | TTTTGCTTGTGTGTAGCTAG+AGG | - | chr5.1:49957194-49957213 | MS.gene64127:intron | 40.0% |
| !! | CAAATGCTTTTTGGTCTGTG+TGG | + | chr5.1:49954248-49954267 | None:intergenic | 40.0% |
| !! | GCTGTTTTCATAAGCTATGC+TGG | + | chr5.1:49953605-49953624 | None:intergenic | 40.0% |
| !! | TAGTCTCTGAGACGATGATA+TGG | - | chr5.1:49954683-49954702 | MS.gene64127:intron | 40.0% |
| !! | TTCCATTCCTTTTAAAGGCC+AGG | - | chr5.1:49953849-49953868 | MS.gene64127:intron | 40.0% |
| !! | TTGTTTGTGAATTGGCTTGG+CGG | - | chr5.1:49958818-49958837 | MS.gene64127:CDS | 40.0% |
| !!! | GGACAAGGTTGTTTTTAAGG+CGG | - | chr5.1:49955888-49955907 | MS.gene64127:intron | 40.0% |
| AAATGCTAATGTCGGGGGAT+TGG | - | chr5.1:49956808-49956827 | MS.gene64127:intron | 45.0% | |
| AACAACCTTGTCCTCAAGGT+TGG | + | chr5.1:49955881-49955900 | None:intergenic | 45.0% | |
| AACTCGCCTACAAACTCAAC+AGG | + | chr5.1:49956553-49956572 | None:intergenic | 45.0% | |
| ACTAGGCATCATACCTCATC+TGG | + | chr5.1:49957467-49957486 | None:intergenic | 45.0% | |
| ACTCGCCTACAAACTCAACA+GGG | + | chr5.1:49956552-49956571 | None:intergenic | 45.0% | |
| AGCACCGTGAGTTCTTCTAA+TGG | + | chr5.1:49954947-49954966 | None:intergenic | 45.0% | |
| AGGGAGAGTGAAATGAAGGT+TGG | + | chr5.1:49953481-49953500 | None:intergenic | 45.0% | |
| AGGGTTTGTCACTGGAAGTA+CGG | - | chr5.1:49957214-49957233 | MS.gene64127:intron | 45.0% | |
| AGTATGCCAAGCACATATCC+AGG | + | chr5.1:49956930-49956949 | None:intergenic | 45.0% | |
| ATATGGCCTGGATATGTGCT+TGG | - | chr5.1:49956921-49956940 | MS.gene64127:intron | 45.0% | |
| CAATTGCACCCAAATGCTTG+AGG | + | chr5.1:49955761-49955780 | None:intergenic | 45.0% | |
| CATGCAAATGCTAATGTCGG+GGG | - | chr5.1:49956803-49956822 | MS.gene64127:intron | 45.0% | |
| CATTTCCAACCTTGAGGACA+AGG | - | chr5.1:49955873-49955892 | MS.gene64127:intron | 45.0% | |
| CCAAGTTAGTTAGAGAGTGG+AGG | - | chr5.1:49954750-49954769 | MS.gene64127:intron | 45.0% | |
| CCTCCACTCTCTAACTAACT+TGG | + | chr5.1:49954753-49954772 | None:intergenic | 45.0% | |
| CTATTATGTGGCGATGCAGT+TGG | - | chr5.1:49955120-49955139 | MS.gene64127:intron | 45.0% | |
| CTGCCAAGTTAGTTAGAGAG+TGG | - | chr5.1:49954747-49954766 | MS.gene64127:intron | 45.0% | |
| CTGGCAAGTTAGTTAGAGAG+TGG | - | chr5.1:49955965-49955984 | MS.gene64127:intron | 45.0% | |
| CTTACACTTCCTCTCCAAGT+TGG | + | chr5.1:49955945-49955964 | None:intergenic | 45.0% | |
| CTTGTCCTCAAGGTTGGAAA+TGG | + | chr5.1:49955875-49955894 | None:intergenic | 45.0% | |
| GACGTCGAAGATTTAGCACA+AGG | + | chr5.1:49957743-49957762 | None:intergenic | 45.0% | |
| GAGGGGAAATACATGTGAGA+GGG | - | chr5.1:49954769-49954788 | MS.gene64127:intron | 45.0% | |
| GAGTAGCGAACCATTTAGCT+AGG | - | chr5.1:49957597-49957616 | MS.gene64127:intron | 45.0% | |
| GAGTATAAGAGGTCTGTAGG+AGG | - | chr5.1:49954791-49954810 | MS.gene64127:CDS | 45.0% | |
| GATAAAAGCCCAACTTGGAG+AGG | - | chr5.1:49955933-49955952 | MS.gene64127:intron | 45.0% | |
| GCAAGTTAGTTAGAGAGTGG+AGG | - | chr5.1:49955968-49955987 | MS.gene64127:intron | 45.0% | |
| GCATGCAAATGCTAATGTCG+GGG | - | chr5.1:49956802-49956821 | MS.gene64127:intron | 45.0% | |
| GCTTCAATGACGCCAAAACA+AGG | - | chr5.1:49953354-49953373 | MS.gene64127:CDS | 45.0% | |
| GGCATGCAAATGCTAATGTC+GGG | - | chr5.1:49956801-49956820 | MS.gene64127:intron | 45.0% | |
| GGGAGTAGAACTATCAGGTA+TGG | - | chr5.1:49954463-49954482 | MS.gene64127:intron | 45.0% | |
| GTCATTGAAGACACTCAGGT+TGG | + | chr5.1:49955788-49955807 | None:intergenic | 45.0% | |
| GTTCCGATAAACGTTCACAC+TGG | + | chr5.1:49955024-49955043 | None:intergenic | 45.0% | |
| GTTGAGGGAGAGTGAAATGA+AGG | + | chr5.1:49953485-49953504 | None:intergenic | 45.0% | |
| GTTGTATGGAAGCCATTGAG+AGG | - | chr5.1:49955487-49955506 | MS.gene64127:intron | 45.0% | |
| TAGAGAGGGAAGAAGTGATG+GGG | + | chr5.1:49953443-49953462 | None:intergenic | 45.0% | |
| TAGTTAGTGAGGCGTGATAC+TGG | - | chr5.1:49958006-49958025 | MS.gene64127:intron | 45.0% | |
| TGAGTGCATGTGAGAATCCA+AGG | + | chr5.1:49958392-49958411 | None:intergenic | 45.0% | |
| TGTCTACCAATATAAGGCCG+TGG | + | chr5.1:49958294-49958313 | None:intergenic | 45.0% | |
| TGTGGAAATGTCCTACCAGA+TGG | - | chr5.1:49957281-49957300 | MS.gene64127:intron | 45.0% | |
| TTCTCTCTGCCTAAACCGTA+AGG | + | chr5.1:49956071-49956090 | None:intergenic | 45.0% | |
| TTGCAACCCTTATGAAGACG+AGG | - | chr5.1:49958689-49958708 | MS.gene64127:intron | 45.0% | |
| TTTGCGTTCTGTGATCACTG+AGG | - | chr5.1:49954898-49954917 | MS.gene64127:intron | 45.0% | |
| ! | AGGAGTATGGACCTGTAGTT+AGG | + | chr5.1:49958460-49958479 | None:intergenic | 45.0% |
| ! | AGGGAGTATAAGAGGTCTGT+AGG | - | chr5.1:49954788-49954807 | MS.gene64127:CDS | 45.0% |
| ! | ATCGTCAGAGTGCTTTCGAT+AGG | - | chr5.1:49953818-49953837 | MS.gene64127:intron | 45.0% |
| ! | ATTGCTGTATTTTCCGTGGG+GGG | - | chr5.1:49954651-49954670 | MS.gene64127:intron | 45.0% |
| ! | CATGTGAGAGGGAGTATAAG+AGG | - | chr5.1:49954780-49954799 | MS.gene64127:CDS | 45.0% |
| ! | CGTTTGGGTTACTTCATCAG+CGG | - | chr5.1:49955049-49955068 | MS.gene64127:intron | 45.0% |
| ! | CTGCTATTTAAAAGGGGAGC+AGG | + | chr5.1:49957718-49957737 | None:intergenic | 45.0% |
| ! | GCTTACTTTGCCGCGAATTT+TGG | + | chr5.1:49953514-49953533 | None:intergenic | 45.0% |
| ! | TCGTCAGAGTGCTTTCGATA+GGG | - | chr5.1:49953819-49953838 | MS.gene64127:intron | 45.0% |
| ! | TGAGGAGATTCAGCTTGCTT+TGG | - | chr5.1:49954916-49954935 | MS.gene64127:intron | 45.0% |
| !! | ACAAGATCTTTGGGAGCATC+AGG | + | chr5.1:49958802-49958821 | None:intergenic | 45.0% |
| !! | CATTTGGGTGCTGCTTATGT+TGG | - | chr5.1:49955711-49955730 | MS.gene64127:CDS | 45.0% |
| !! | TTAAGGCGGTGGCATTGATA+GGG | - | chr5.1:49955902-49955921 | MS.gene64127:intron | 45.0% |
| !! | TTGATTGGCTTTGCAGCAAG+TGG | - | chr5.1:49958261-49958280 | MS.gene64127:intron | 45.0% |
| !! | TTTAAGGCGGTGGCATTGAT+AGG | - | chr5.1:49955901-49955920 | MS.gene64127:intron | 45.0% |
| !!! | CAAGGTTGTTTTTAAGGCGG+TGG | - | chr5.1:49955891-49955910 | MS.gene64127:intron | 45.0% |
| !!! | ACTTTTTAATAAAATAAAAT+TGG | - | chr5.1:49956668-49956687 | MS.gene64127:intron | 5.0% |
| AACGTCATGGTCTGCAGCTT+TGG | + | chr5.1:49957435-49957454 | None:intergenic | 50.0% | |
| ACACACGAGTGGTCGTTGTA+TGG | - | chr5.1:49955473-49955492 | MS.gene64127:intron | 50.0% | |
| ATGACCAGACAATGGGATCC+AGG | - | chr5.1:49955574-49955593 | MS.gene64127:intron | 50.0% | |
| CAAAACTCTTGGGTGCGTGA+TGG | - | chr5.1:49955199-49955218 | MS.gene64127:intron | 50.0% | |
| CTCGATTCTCACCATCTGGT+AGG | + | chr5.1:49957295-49957314 | None:intergenic | 50.0% | |
| GAGGGGAAATACTCGTGAGA+GGG | - | chr5.1:49955987-49956006 | MS.gene64127:intron | 50.0% | |
| GGAGGGGAAATACATGTGAG+AGG | - | chr5.1:49954768-49954787 | MS.gene64127:intron | 50.0% | |
| GTAGCTAGAGGGTTTGTCAC+TGG | - | chr5.1:49957206-49957225 | MS.gene64127:intron | 50.0% | |
| TCTGAGGAGCTTATGCTCTG+GGG | - | chr5.1:49956101-49956120 | MS.gene64127:intron | 50.0% | |
| TCTTGGGTGCGTGATGGTAA+CGG | - | chr5.1:49955205-49955224 | MS.gene64127:intron | 50.0% | |
| TGACCAGACAATGGGATCCA+GGG | - | chr5.1:49955575-49955594 | MS.gene64127:intron | 50.0% | |
| TTTGTTGCGGAGTCAGGTCA+TGG | - | chr5.1:49955151-49955170 | MS.gene64127:intron | 50.0% | |
| ! | CATACCTCATCTGGAGTGAC+TGG | + | chr5.1:49957458-49957477 | None:intergenic | 50.0% |
| ! | CTCGTGAGAGGGAGTATAAG+AGG | - | chr5.1:49955998-49956017 | MS.gene64127:intron | 50.0% |
| ! | CTCTGAGGAGCTTATGCTCT+GGG | - | chr5.1:49956100-49956119 | MS.gene64127:intron | 50.0% |
| ! | CTTGGAGAGGAAGTGTAAGC+TGG | - | chr5.1:49955946-49955965 | MS.gene64127:intron | 50.0% |
| ! | TCTCTGAGGAGCTTATGCTC+TGG | - | chr5.1:49956099-49956118 | MS.gene64127:intron | 50.0% |
| ! | TGGTCTGCAGCTTTGGTAGT+TGG | + | chr5.1:49957428-49957447 | None:intergenic | 50.0% |
| ! | TTGCTGTATTTTCCGTGGGG+GGG | - | chr5.1:49954652-49954671 | MS.gene64127:intron | 50.0% |
| !! | GATCTTTGGGAGCATCAGGA+AGG | + | chr5.1:49958798-49958817 | None:intergenic | 50.0% |
| CAATATAAGGCCGTGGTCCG+AGG | + | chr5.1:49958287-49958306 | None:intergenic | 55.0% | |
| CGTTCCAGTCACTCCAGATG+AGG | - | chr5.1:49957451-49957470 | MS.gene64127:intron | 55.0% | |
| CTGGAGTGACTGGAACGTCA+TGG | + | chr5.1:49957448-49957467 | None:intergenic | 55.0% | |
| CTTCCCTGGATCCCATTGTC+TGG | + | chr5.1:49955581-49955600 | None:intergenic | 55.0% | |
| CTTGGGTGCGTGATGGTAAC+GGG | - | chr5.1:49955206-49955225 | MS.gene64127:intron | 55.0% | |
| GAGGTCTGTAGGAGGGAAAG+AGG | - | chr5.1:49954799-49954818 | MS.gene64127:CDS | 55.0% | |
| GGAGGGGAAATACTCGTGAG+AGG | - | chr5.1:49955986-49956005 | MS.gene64127:intron | 55.0% | |
| GTGTCAGAATGGAGGCAGAG+AGG | - | chr5.1:49954589-49954608 | MS.gene64127:intron | 55.0% | |
| ! | CTCACGGTGCTGAAACACAC+TGG | - | chr5.1:49954956-49954975 | MS.gene64127:CDS | 55.0% |
| ! | CTCGGACCACGGCCTTATAT+TGG | - | chr5.1:49958285-49958304 | MS.gene64127:intron | 55.0% |
| ! | GAAACACACTGGCTAGGTGG+AGG | - | chr5.1:49954967-49954986 | MS.gene64127:CDS | 55.0% |
| ! | GCTGAAACACACTGGCTAGG+TGG | - | chr5.1:49954964-49954983 | MS.gene64127:CDS | 55.0% |
| ! | GCTGGTTTCTCACACACGAG+TGG | - | chr5.1:49955462-49955481 | MS.gene64127:intron | 55.0% |
| ! | GGTGCTGAAACACACTGGCT+AGG | - | chr5.1:49954961-49954980 | MS.gene64127:CDS | 55.0% |
| ! | TGGCTTGGCGGTATGTCTAC+TGG | - | chr5.1:49958830-49958849 | MS.gene64127:CDS | 55.0% |
| ! | TGTATTTTCCGTGGGGGGGT+GGG | - | chr5.1:49954656-49954675 | MS.gene64127:intron | 55.0% |
| !! | CGTGAGTTTGTTGCGGAGTC+AGG | - | chr5.1:49955145-49955164 | MS.gene64127:intron | 55.0% |
| !! | GTTGGCGCGTGAGTTTGTTG+CGG | - | chr5.1:49955138-49955157 | MS.gene64127:intron | 55.0% |
| GCGGTATGTCTACTGGCCCT+TGG | - | chr5.1:49958837-49958856 | MS.gene64127:CDS | 60.0% | |
| GGCTTTGCAGCAAGTGGCCT+CGG | - | chr5.1:49958267-49958286 | MS.gene64127:intron | 60.0% | |
| ! | CTGTATTTTCCGTGGGGGGG+TGG | - | chr5.1:49954655-49954674 | MS.gene64127:intron | 60.0% |
| ! | GTATTTTCCGTGGGGGGGTG+GGG | - | chr5.1:49954657-49954676 | MS.gene64127:intron | 60.0% |
| ! | TATTTTCCGTGGGGGGGTGG+GGG | - | chr5.1:49954658-49954677 | MS.gene64127:intron | 60.0% |
| CAGCAAGTGGCCTCGGACCA+CGG | - | chr5.1:49958274-49958293 | MS.gene64127:intron | 65.0% | |
| ! | ATTTTCCGTGGGGGGGTGGG+GGG | - | chr5.1:49954659-49954678 | MS.gene64127:intron | 65.0% |
| ACTAACCCCCCACCCCCCCA+CGG | + | chr5.1:49954667-49954686 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 49953345 | 49958903 | 49953345 | ID=MS.gene64127 |
| chr5.1 | mRNA | 49953345 | 49958903 | 49953345 | ID=MS.gene64127.t1;Parent=MS.gene64127 |
| chr5.1 | exon | 49958721 | 49958903 | 49958721 | ID=MS.gene64127.t1.exon1;Parent=MS.gene64127.t1 |
| chr5.1 | CDS | 49958721 | 49958903 | 49958721 | ID=cds.MS.gene64127.t1;Parent=MS.gene64127.t1 |
| chr5.1 | exon | 49958378 | 49958479 | 49958378 | ID=MS.gene64127.t1.exon2;Parent=MS.gene64127.t1 |
| chr5.1 | CDS | 49958378 | 49958479 | 49958378 | ID=cds.MS.gene64127.t1;Parent=MS.gene64127.t1 |
| chr5.1 | exon | 49955683 | 49955812 | 49955683 | ID=MS.gene64127.t1.exon3;Parent=MS.gene64127.t1 |
| chr5.1 | CDS | 49955683 | 49955812 | 49955683 | ID=cds.MS.gene64127.t1;Parent=MS.gene64127.t1 |
| chr5.1 | exon | 49954946 | 49955038 | 49954946 | ID=MS.gene64127.t1.exon4;Parent=MS.gene64127.t1 |
| chr5.1 | CDS | 49954946 | 49955038 | 49954946 | ID=cds.MS.gene64127.t1;Parent=MS.gene64127.t1 |
| chr5.1 | exon | 49954776 | 49954864 | 49954776 | ID=MS.gene64127.t1.exon5;Parent=MS.gene64127.t1 |
| chr5.1 | CDS | 49954776 | 49954864 | 49954776 | ID=cds.MS.gene64127.t1;Parent=MS.gene64127.t1 |
| chr5.1 | exon | 49954062 | 49954142 | 49954062 | ID=MS.gene64127.t1.exon6;Parent=MS.gene64127.t1 |
| chr5.1 | CDS | 49954062 | 49954142 | 49954062 | ID=cds.MS.gene64127.t1;Parent=MS.gene64127.t1 |
| chr5.1 | exon | 49953882 | 49953971 | 49953882 | ID=MS.gene64127.t1.exon7;Parent=MS.gene64127.t1 |
| chr5.1 | CDS | 49953882 | 49953971 | 49953882 | ID=cds.MS.gene64127.t1;Parent=MS.gene64127.t1 |
| chr5.1 | exon | 49953691 | 49953780 | 49953691 | ID=MS.gene64127.t1.exon8;Parent=MS.gene64127.t1 |
| chr5.1 | CDS | 49953691 | 49953780 | 49953691 | ID=cds.MS.gene64127.t1;Parent=MS.gene64127.t1 |
| chr5.1 | exon | 49953538 | 49953588 | 49953538 | ID=MS.gene64127.t1.exon9;Parent=MS.gene64127.t1 |
| chr5.1 | CDS | 49953538 | 49953588 | 49953538 | ID=cds.MS.gene64127.t1;Parent=MS.gene64127.t1 |
| chr5.1 | exon | 49953345 | 49953455 | 49953345 | ID=MS.gene64127.t1.exon10;Parent=MS.gene64127.t1 |
| chr5.1 | CDS | 49953345 | 49953455 | 49953345 | ID=cds.MS.gene64127.t1;Parent=MS.gene64127.t1 |
| Gene Sequence |
| Protein sequence |
