AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene64187

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene64187.t1 MTR_1g023690 97.117 555 14 1 1 553 1 555 0.0 1101
MS.gene64187.t1 MTR_4g072090 49.278 485 178 18 42 504 41 479 1.28e-110 339
MS.gene64187.t1 MTR_4g072090 48.667 450 163 18 42 469 41 444 3.94e-97 302
MS.gene64187.t1 MTR_6g034945 47.964 221 94 8 301 513 74 281 4.45e-44 159
MS.gene64187.t1 MTR_2g099050 60.000 140 53 2 340 477 175 313 3.39e-41 154
MS.gene64187.t1 MTR_3g094020 54.777 157 67 2 368 521 91 246 2.72e-40 149
MS.gene64187.t1 MTR_5g075390 56.944 144 52 2 340 483 124 257 3.08e-39 147
MS.gene64187.t1 MTR_3g467120 52.486 181 78 4 340 518 138 312 4.46e-39 147
MS.gene64187.t1 MTR_2g090900 51.020 98 44 2 384 479 190 285 2.81e-18 86.7
MS.gene64187.t1 MTR_4g079500 50.000 98 45 2 384 479 193 288 2.89e-18 86.7
MS.gene64187.t1 MTR_2g090900 51.020 98 44 2 384 479 190 285 3.34e-18 86.7
MS.gene64187.t1 MTR_0405s0060 65.517 58 20 0 359 416 98 155 9.24e-16 77.4
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene64187.t1 AT4G38900 44.653 533 201 24 19 505 27 511 5.58e-100 313
MS.gene64187.t1 AT4G38900 44.653 533 201 24 19 505 27 511 5.58e-100 313
MS.gene64187.t1 AT4G38900 44.156 539 201 25 19 505 27 517 4.30e-97 306
MS.gene64187.t1 AT2G21230 41.866 461 206 15 79 510 74 501 4.99e-81 263
MS.gene64187.t1 AT2G21230 41.866 461 206 15 79 510 74 501 4.99e-81 263
MS.gene64187.t1 AT2G21230 41.113 467 207 16 79 510 74 507 1.03e-77 254
MS.gene64187.t1 AT2G21230 42.439 410 180 14 79 465 74 450 3.08e-73 241
MS.gene64187.t1 AT1G43700 47.549 204 87 6 300 483 89 292 2.88e-42 155
MS.gene64187.t1 AT2G31370 53.529 170 75 1 340 509 156 321 7.07e-41 152
MS.gene64187.t1 AT2G31370 53.529 170 75 1 340 509 156 321 1.88e-40 151
MS.gene64187.t1 AT2G31370 53.529 170 75 1 340 509 156 321 1.88e-40 151
MS.gene64187.t1 AT2G31370 53.529 170 75 1 340 509 156 321 1.88e-40 151
MS.gene64187.t1 AT2G31370 53.529 170 75 1 340 509 156 321 1.88e-40 151
MS.gene64187.t1 AT2G31370 53.529 170 75 1 340 509 156 321 1.88e-40 151
MS.gene64187.t1 AT2G31370 53.529 170 75 1 340 509 156 321 1.88e-40 151
MS.gene64187.t1 AT2G40620 49.505 202 77 4 337 525 112 301 1.95e-40 150
MS.gene64187.t1 AT1G06070 56.494 154 56 3 334 477 150 302 6.70e-40 150
MS.gene64187.t1 AT1G06850 51.634 153 72 1 356 506 117 269 4.65e-38 143
MS.gene64187.t1 AT2G13150 36.788 193 111 5 298 488 71 254 1.02e-28 115
MS.gene64187.t1 AT2G12940 35.676 185 110 4 296 480 68 243 5.09e-28 114
MS.gene64187.t1 AT2G12900 38.760 129 71 1 357 477 80 208 4.20e-23 99.4
MS.gene64187.t1 AT1G06850 60.241 83 31 1 356 436 117 199 1.56e-21 94.0
MS.gene64187.t1 AT3G58120 51.546 97 43 2 385 479 202 296 7.96e-19 88.2
MS.gene64187.t1 AT2G42380 50.515 97 44 2 385 479 186 280 3.69e-18 86.3
MS.gene64187.t1 AT2G42380 51.190 84 37 2 385 466 186 267 1.00e-15 78.2
MS.gene64187.t1 AT3G58120 52.439 82 35 2 385 464 202 281 2.21e-15 77.4
MS.gene64187.t1 AT2G21235 32.995 197 90 5 382 542 356 546 5.11e-15 78.6
MS.gene64187.t1 AT2G42380 46.392 97 37 3 385 479 186 269 1.51e-12 69.3
MS.gene64187.t1 AT1G58110 43.158 95 49 1 383 477 232 321 7.87e-11 64.3
MS.gene64187.t1 AT1G58110 43.158 95 49 1 383 477 232 321 7.87e-11 64.3

Find 156 sgRNAs with CRISPR-Local

Find 222 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
CCAAACTCCATGCTGATTTC+TGG 0.095023 1.3:+1524902 None:intergenic
TGAATTCTCTTCTAGGATTT+TGG 0.159961 1.3:-1524692 MS.gene64187:intron
TTAGGTGATAAACTGGTATT+AGG 0.185148 1.3:+1525793 None:intergenic
ATTTGATTAATTTGATTAAT+AGG 0.196865 1.3:+1525874 None:intergenic
GTTTAGTGCTTACATGAATT+TGG 0.199161 1.3:-1525254 MS.gene64187:CDS
GATCGTCGGAATTTGGTTTC+TGG 0.214069 1.3:-1525403 MS.gene64187:CDS
ATGGAGGATGGCTTGGGTTT+TGG 0.216775 1.3:-1525592 MS.gene64187:CDS
TCTAGCAGTGATTCGCCTTT+AGG 0.230921 1.3:-1525487 MS.gene64187:CDS
GAGATTGTGGAGGCATAAAT+TGG 0.250520 1.3:+1525752 None:intergenic
GGCATAGGATTCAATTGAAT+TGG 0.265815 1.3:+1525895 None:intergenic
GATGATACGCACCTGTAATT+TGG 0.269495 1.3:+1524555 None:intergenic
CCTGAAAATCACAAAAGTTC+TGG 0.271067 1.3:-1525844 MS.gene64187:CDS
GTCTGCCCTCTCAGGTCTTA+TGG 0.290824 1.3:-1523281 MS.gene64187:CDS
AATCACAAAAGTTCTGGTTT+TGG 0.303027 1.3:-1525838 MS.gene64187:CDS
TGTCAGTGATCGTCGGAATT+TGG 0.310184 1.3:-1525410 MS.gene64187:CDS
TTGGCTGCTGATGCTGCGCC+TGG 0.311111 1.3:+1523227 None:intergenic
CTAGCAGTGATTCGCCTTTA+GGG 0.324253 1.3:-1525486 MS.gene64187:CDS
GATGAAATACATTTCTGAAT+TGG 0.329479 1.3:-1524632 MS.gene64187:CDS
GACTGTGTTGATGGGTTTAG+AGG 0.332730 1.3:-1525328 MS.gene64187:CDS
TACTCAGTTTACCAAATTAC+AGG 0.335238 1.3:-1524566 MS.gene64187:intron
GATAAACTGGTATTAGGGTT+AGG 0.348576 1.3:+1525799 None:intergenic
TATTAATCAAATTAATCAAA+TGG 0.352253 1.3:-1525872 MS.gene64187:CDS
CCAGAAATCAGCATGGAGTT+TGG 0.352422 1.3:-1524902 MS.gene64187:CDS
CAAATTGAGGCTTCAATCCT+TGG 0.361103 1.3:-1524378 MS.gene64187:CDS
TTCGAACCCGATTCCGAAAA+GGG 0.372318 1.3:+1525625 None:intergenic
GGAGTCAAGAGGAGTTCTAA+TGG 0.374634 1.3:-1525073 MS.gene64187:CDS
GCATAGGATTCAATTGAATT+GGG 0.375101 1.3:+1525896 None:intergenic
TAGTTTCTGTCTGAAGAGTT+TGG 0.377481 1.3:+1524599 None:intergenic
GGGTTCGAAAGATGTTTCTA+TGG 0.378171 1.3:-1525611 MS.gene64187:CDS
GTTTCTATGGAGGATGGCTT+GGG 0.385643 1.3:-1525598 MS.gene64187:CDS
TGATGGTTTAGGTGATAAAC+TGG 0.388036 1.3:+1525786 None:intergenic
CACAATCTCAAACTCATTCC+AGG 0.390554 1.3:-1525738 MS.gene64187:CDS
AAGGATAGGGACTGTGTTGA+TGG 0.391348 1.3:-1525337 MS.gene64187:CDS
TGGAAATTTCTAAGCTGGTT+TGG 0.392467 1.3:+1523208 None:intergenic
GGATAAGGAGATGATGGTTT+AGG 0.394908 1.3:+1525775 None:intergenic
GCCGATTCAGTTGGTGTTGA+AGG 0.397394 1.3:-1525356 MS.gene64187:CDS
GGGTTTGAACTTACATGATA+AGG 0.398012 1.3:+1525646 None:intergenic
CGTGTAAATGTGAAAGGAAT+AGG 0.399807 1.3:-1525139 MS.gene64187:CDS
TTCTTACCTCTTTGCACGCT+TGG 0.401343 1.3:+1524802 None:intergenic
ACAGGAGATGAAGAAAATAA+TGG 0.405735 1.3:-1524861 MS.gene64187:CDS
TCTTACCTCTTTGCACGCTT+GGG 0.408680 1.3:+1524803 None:intergenic
GGTTTGAACTTACATGATAA+GGG 0.413641 1.3:+1525647 None:intergenic
AGATTGTGGAGGCATAAATT+GGG 0.419988 1.3:+1525753 None:intergenic
TATTAACCAACAAATGTTCC+AGG 0.420194 1.3:-1523245 MS.gene64187:CDS
AGAGAATGATGGAGCTGAAA+TGG 0.422683 1.3:-1525284 MS.gene64187:CDS
TGATTCGCCTTTAGGGATAT+CGG 0.426575 1.3:-1525479 MS.gene64187:CDS
ATTAATCAAATTAATCAAAT+GGG 0.434941 1.3:-1525871 MS.gene64187:CDS
TTTCGAACCCGATTCCGAAA+AGG 0.436816 1.3:+1525624 None:intergenic
ATTGTCTTCCGCCTCGTAAA+GGG 0.438192 1.3:-1525519 MS.gene64187:CDS
CATAAGCTTCCTCCTTTACA+AGG 0.439342 1.3:-1524974 MS.gene64187:CDS
TGCCATTCTGATGCTTCGAT+TGG 0.443341 1.3:+1523113 None:intergenic
TTTAGAGGAGAGAGTTTCGA+TGG 0.447218 1.3:-1525313 MS.gene64187:CDS
GCTGCGCCTGGAACATTTGT+TGG 0.447847 1.3:+1523239 None:intergenic
GAGGAGAGAGTTTCGATGGG+AGG 0.451918 1.3:-1525309 MS.gene64187:CDS
TGTTTCTATGGAGGATGGCT+TGG 0.451973 1.3:-1525599 MS.gene64187:CDS
GGCGGAGAGTCTGCCCTCTC+AGG 0.456637 1.3:-1523289 MS.gene64187:CDS
GCCGCAAAACAGCGTCTCTC+AGG 0.456659 1.3:-1523185 MS.gene64187:CDS
TAGGTGATAAACTGGTATTA+GGG 0.460276 1.3:+1525794 None:intergenic
GGAGGCATAAATTGGGGATA+AGG 0.460553 1.3:+1525760 None:intergenic
TTCAACCGTCTTCGAACCAC+TGG 0.466140 1.3:+1525186 None:intergenic
TCCTTCAACACCAACTGAAT+CGG 0.468786 1.3:+1525355 None:intergenic
GCGGCTGGAAATTTCTAAGC+TGG 0.471848 1.3:+1523203 None:intergenic
CAGTTGGGACTGTTGTTCCA+AGG 0.474662 1.3:+1524361 None:intergenic
CATTGTCTTCCGCCTCGTAA+AGG 0.477811 1.3:-1525520 MS.gene64187:CDS
CTACCATCCATTGAATTGCT+AGG 0.480737 1.3:+1524932 None:intergenic
AATTGGGGATAAGGAGATGA+TGG 0.483937 1.3:+1525769 None:intergenic
ATAAACTGGTATTAGGGTTA+GGG 0.484174 1.3:+1525800 None:intergenic
TGTTAACTCTGTGCCTCAGC+TGG 0.484237 1.3:-1525452 MS.gene64187:CDS
ATCAGCATGGAGTTTGGAAA+TGG 0.484264 1.3:-1524896 MS.gene64187:CDS
TTGCTAGGCGAGTGTTGACC+AGG 0.493979 1.3:+1524947 None:intergenic
AGACTTTGAATGGCGAAGTC+CGG 0.501336 1.3:-1523339 MS.gene64187:CDS
TCAGCTGGTGACGTCTCAGC+TGG 0.501726 1.3:-1525437 MS.gene64187:CDS
ACTCAATGGTGGCAAAGAAA+AGG 0.504888 1.3:+1525681 None:intergenic
TTCAGTTGGTGTTGAAGGAT+AGG 0.505836 1.3:-1525351 MS.gene64187:CDS
ATGCATACCATCTTTCAGTT+GGG 0.510205 1.3:+1524346 None:intergenic
ACATAGGAGAAGTTACTCAT+TGG 0.510819 1.3:-1525029 MS.gene64187:CDS
TTAGAGGAGAGAGTTTCGAT+GGG 0.511374 1.3:-1525312 MS.gene64187:CDS
CTGGAATGAGTTTGAGATTG+TGG 0.518906 1.3:+1525739 None:intergenic
GGGGAAGGGGAAGGACTCAA+TGG 0.522243 1.3:+1525667 None:intergenic
TGTGAAAGGAATAGGTGCTA+AGG 0.524307 1.3:-1525131 MS.gene64187:CDS
CATTTCTGAATTGGAGCAGA+AGG 0.526293 1.3:-1524623 MS.gene64187:CDS
AGACACACTGTAGCAGAACT+AGG 0.526862 1.3:-1523310 MS.gene64187:CDS
GGGTGCGACTTCAAGCTGTT+CGG 0.528279 1.3:-1525110 MS.gene64187:CDS
GGTTAGGCGAAGGTGCATGA+TGG 0.530722 1.3:+1525566 None:intergenic
CATGCATACCATCTTTCAGT+TGG 0.532496 1.3:+1524345 None:intergenic
TCAGTTGGTGTTGAAGGATA+GGG 0.533089 1.3:-1525350 MS.gene64187:CDS
CATAGGATTCAATTGAATTG+GGG 0.534542 1.3:+1525897 None:intergenic
GTATTAGGGTTAGGGTATGA+AGG 0.535303 1.3:+1525808 None:intergenic
ACAAATTCCGATATCCCTAA+AGG 0.537853 1.3:+1525472 None:intergenic
GTTAGGCGAAGGTGCATGAT+GGG 0.538166 1.3:+1525567 None:intergenic
AAAGATGTTTCTATGGAGGA+TGG 0.538942 1.3:-1525604 MS.gene64187:CDS
AACTTACATGATAAGGGGAA+GGG 0.539958 1.3:+1525653 None:intergenic
CGCGGTCATGCTGTTCAACA+TGG 0.545730 1.3:-1525544 MS.gene64187:CDS
ACACTCGCCTAGCAATTCAA+TGG 0.545737 1.3:-1524939 MS.gene64187:CDS
CGTCGGAATTTGGTTTCTGG+AGG 0.548514 1.3:-1525400 MS.gene64187:CDS
TGAATTAATGCATGAACGAA+TGG 0.549104 1.3:-1525965 None:intergenic
CTTCAAGCTGTTCGGATGAG+AGG 0.556692 1.3:-1525102 MS.gene64187:CDS
TTAATTTGATTAATAGGCAT+AGG 0.556871 1.3:+1525880 None:intergenic
GAAGGGGAAGGACTCAATGG+TGG 0.557252 1.3:+1525670 None:intergenic
CCTCCTTTACAAGGTCGACC+TGG 0.557576 1.3:-1524965 MS.gene64187:CDS
CAACAGTCCCAACTGAAAGA+TGG 0.557734 1.3:-1524353 MS.gene64187:intron
TCAATCAGCTGCTCGCTCAA+AGG 0.558910 1.3:-1524662 MS.gene64187:CDS
ACTTCTCCTATGTCGACCAC+TGG 0.561188 1.3:+1525039 None:intergenic
GAACTTACATGATAAGGGGA+AGG 0.561647 1.3:+1525652 None:intergenic
ACTTACATGATAAGGGGAAG+GGG 0.562315 1.3:+1525654 None:intergenic
AGGATAGGGACTGTGTTGAT+GGG 0.565060 1.3:-1525336 MS.gene64187:CDS
AGAGGAGGGAAGGAGTCAAG+AGG 0.565709 1.3:-1525084 MS.gene64187:CDS
GCTCTGAATGAGACTTTGAA+TGG 0.567061 1.3:-1523349 MS.gene64187:CDS
CTACAGTGTGTCTTAAGCGC+CGG 0.567559 1.3:+1523320 None:intergenic
AGCTGAGACGTCACCAGCTG+AGG 0.567922 1.3:+1525439 None:intergenic
TTCCAATCGAAGCATCAGAA+TGG 0.567958 1.3:-1523115 MS.gene64187:CDS
GATTGTGGAGGCATAAATTG+GGG 0.570685 1.3:+1525754 None:intergenic
TTGCTCCCAGTGGTCGACAT+AGG 0.574211 1.3:-1525045 MS.gene64187:CDS
GAGAGTCGTGTAAATGTGAA+AGG 0.575120 1.3:-1525145 MS.gene64187:CDS
AGAATAAAGAGTACAAATTG+AGG 0.575659 1.3:-1524391 MS.gene64187:CDS
GTTTCTGGAGGAGAGAAACC+TGG 0.577894 1.3:-1525388 MS.gene64187:CDS
GCATGACCGCGGTTAGGCGA+AGG 0.578882 1.3:+1525556 None:intergenic
CAAGCTGTTCGGATGAGAGG+AGG 0.579196 1.3:-1525099 MS.gene64187:CDS
TGTTCGGATGAGAGGAGGGA+AGG 0.581391 1.3:-1525094 MS.gene64187:CDS
TGACCAGGTCGACCTTGTAA+AGG 0.581765 1.3:+1524962 None:intergenic
GATGGGAGGAAAGAGAATGA+TGG 0.583007 1.3:-1525295 MS.gene64187:CDS
TTAGGGTTAGGGTATGAAGG+TGG 0.584414 1.3:+1525811 None:intergenic
TTCCGCCTCGTAAAGGGCAT+AGG 0.587282 1.3:-1525513 MS.gene64187:CDS
TGAACAGCATGACCGCGGTT+AGG 0.587550 1.3:+1525550 None:intergenic
ACATGATAAGGGGAAGGGGA+AGG 0.589634 1.3:+1525658 None:intergenic
GTGAAAGGAATAGGTGCTAA+GGG 0.589966 1.3:-1525130 MS.gene64187:CDS
CGCCTCGTAAAGGGCATAGG+CGG 0.597353 1.3:-1525510 MS.gene64187:CDS
AGTAGGTTGTGACAAAGACC+TGG 0.598554 1.3:+1525720 None:intergenic
TCGCCTAGCAATTCAATGGA+TGG 0.602631 1.3:-1524935 MS.gene64187:CDS
AAATGGTGAATTCAGCTCAC+AGG 0.605226 1.3:-1524879 MS.gene64187:CDS
TCGAACCCGATTCCGAAAAG+GGG 0.606202 1.3:+1525626 None:intergenic
TTATGAGAAGCCGATTCAGT+TGG 0.606692 1.3:-1525365 MS.gene64187:CDS
AAGCTGTTCGGATGAGAGGA+GGG 0.607449 1.3:-1525098 MS.gene64187:CDS
TTCGAAAGATGTTTCTATGG+AGG 0.608243 1.3:-1525608 MS.gene64187:CDS
TGAATCGGCTTCTCATAACC+AGG 0.610622 1.3:+1525370 None:intergenic
GTTTGAACTTACATGATAAG+GGG 0.611900 1.3:+1525648 None:intergenic
CAGCTGCTCGCTCAAAGGAG+CGG 0.613324 1.3:-1524657 MS.gene64187:CDS
CTTCTCCTATGTCGACCACT+GGG 0.616721 1.3:+1525040 None:intergenic
TCGAGCCATAAGACCTGAGA+GGG 0.619641 1.3:+1523276 None:intergenic
CCAGGTCGACCTTGTAAAGG+AGG 0.621909 1.3:+1524965 None:intergenic
TGGTGAGTGTCAGTGATCGT+CGG 0.625242 1.3:-1525417 MS.gene64187:CDS
CAGAACCAGTGGTTCGAAGA+CGG 0.626425 1.3:-1525191 MS.gene64187:CDS
ATAGGATTCAATTGAATTGG+GGG 0.630004 1.3:+1525898 None:intergenic
TTACTGCAAACATTATGCAG+TGG 0.632905 1.3:+1523087 None:intergenic
TAAAACACCAGAAATCAGCA+TGG 0.660292 1.3:-1524909 MS.gene64187:CDS
CGCCTATGCCCTTTACGAGG+CGG 0.666230 1.3:+1525511 None:intergenic
ATGGAAGATAGCAGAACCAG+TGG 0.676860 1.3:-1525202 MS.gene64187:CDS
GACCGCCTATGCCCTTTACG+AGG 0.680484 1.3:+1525508 None:intergenic
CTGATCCCAAGCGTGCAAAG+AGG 0.685194 1.3:-1524808 MS.gene64187:intron
CATGCACCTTCGCCTAACCG+CGG 0.696591 1.3:-1525562 MS.gene64187:CDS
TAAACTTGCTGAAATTGCTG+CGG 0.696854 1.3:-1524831 MS.gene64187:CDS
GAATGAGTTTGAGATTGTGG+AGG 0.705083 1.3:+1525742 None:intergenic
GTCGAGCCATAAGACCTGAG+AGG 0.706228 1.3:+1523275 None:intergenic
AATGGAGATATTGCTCCCAG+TGG 0.710736 1.3:-1525055 MS.gene64187:CDS
CATGTTGAACAGCATGACCG+CGG 0.717359 1.3:+1525545 None:intergenic
CACACTGTAGCAGAACTAGG+CGG 0.776415 1.3:-1523307 MS.gene64187:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTAATCAAATTAATCAAAT+GGG - chr1.3:1523186-1523205 MS.gene64187:CDS 10.0%
!! TATTAATCAAATTAATCAAA+TGG - chr1.3:1523185-1523204 MS.gene64187:CDS 10.0%
!!! ATTTGATTAATTTGATTAAT+AGG + chr1.3:1523186-1523205 None:intergenic 10.0%
!!! TTCAATATTAAAATTTTCAA+TGG + chr1.3:1524060-1524079 None:intergenic 10.0%
!!! GAATATAGTAATTCAAATTT+TGG - chr1.3:1524950-1524969 MS.gene64187:CDS 15.0%
!! AATTCACAAACTTAAGAAAA+AGG + chr1.3:1524545-1524564 None:intergenic 20.0%
!! CTTAATACATGATACTAAAA+TGG + chr1.3:1525240-1525259 None:intergenic 20.0%
!! GAATCAATAGATAAAAAAGT+AGG + chr1.3:1523357-1523376 None:intergenic 20.0%
!! TAACTAGAACATAAAGTAAA+AGG + chr1.3:1524746-1524765 None:intergenic 20.0%
!! TGAATACATAGCTAAATATT+TGG + chr1.3:1525668-1525687 None:intergenic 20.0%
!! TTTCAAAAAAATAGATTGCA+AGG + chr1.3:1524781-1524800 None:intergenic 20.0%
!!! ATATACTGTATGACAAATTT+TGG - chr1.3:1524922-1524941 MS.gene64187:CDS 20.0%
!!! ATATTTAGATGGATTTTATG+TGG - chr1.3:1524883-1524902 MS.gene64187:CDS 20.0%
!!! CATTTTAGTATCATGTATTA+AGG - chr1.3:1525238-1525257 MS.gene64187:CDS 20.0%
!!! TGTGATTTTCTATATTTAGA+TGG - chr1.3:1524872-1524891 MS.gene64187:CDS 20.0%
!!! TTAATTTGATTAATAGGCAT+AGG + chr1.3:1523180-1523199 None:intergenic 20.0%
! AAGATCAAAAAATATGTTGC+TGG + chr1.3:1525558-1525577 None:intergenic 25.0%
! CAAACTGTTTGAATGTAATA+TGG - chr1.3:1525123-1525142 MS.gene64187:CDS 25.0%
! GATGAAATACATTTCTGAAT+TGG - chr1.3:1524425-1524444 MS.gene64187:intron 25.0%
! TAAATGTTGAATTCTCTTCT+AGG - chr1.3:1524358-1524377 MS.gene64187:CDS 25.0%
!! AGAATAAAGAGTACAAATTG+AGG - chr1.3:1524666-1524685 MS.gene64187:CDS 25.0%
!!! TTGTATATGCAGTTTTAAAG+AGG + chr1.3:1525106-1525125 None:intergenic 25.0%
!!! TTTTTTCCAAAAGAAAGACA+CGG + chr1.3:1524304-1524323 None:intergenic 25.0%
AAAAGAAAGACACGGAAATA+TGG + chr1.3:1524296-1524315 None:intergenic 30.0%
AAAGAAAGACACGGAAATAT+GGG + chr1.3:1524295-1524314 None:intergenic 30.0%
ACAGGAGATGAAGAAAATAA+TGG - chr1.3:1524196-1524215 MS.gene64187:intron 30.0%
ATAAACTGGTATTAGGGTTA+GGG + chr1.3:1523260-1523279 None:intergenic 30.0%
ATAGCAGCATACATGATATA+TGG + chr1.3:1524579-1524598 None:intergenic 30.0%
ATAGGATTCAATTGAATTGG+GGG + chr1.3:1523162-1523181 None:intergenic 30.0%
ATGCTGATAAAGAGATTCAT+AGG + chr1.3:1525473-1525492 None:intergenic 30.0%
CAGAAAAAAGTTCATGCATT+TGG - chr1.3:1523126-1523145 MS.gene64187:CDS 30.0%
CATAGGATTCAATTGAATTG+GGG + chr1.3:1523163-1523182 None:intergenic 30.0%
GCATAGGATTCAATTGAATT+GGG + chr1.3:1523164-1523183 None:intergenic 30.0%
GGTTTGAACTTACATGATAA+GGG + chr1.3:1523413-1523432 None:intergenic 30.0%
GTTTAGTGCTTACATGAATT+TGG - chr1.3:1523803-1523822 MS.gene64187:intron 30.0%
GTTTGAACTTACATGATAAG+GGG + chr1.3:1523412-1523431 None:intergenic 30.0%
TACTCAGTTTACCAAATTAC+AGG - chr1.3:1524491-1524510 MS.gene64187:intron 30.0%
TAGGTGATAAACTGGTATTA+GGG + chr1.3:1523266-1523285 None:intergenic 30.0%
TATTAACCAACAAATGTTCC+AGG - chr1.3:1525812-1525831 MS.gene64187:CDS 30.0%
TTAGGTGATAAACTGGTATT+AGG + chr1.3:1523267-1523286 None:intergenic 30.0%
! ATATTTCCGTGTCTTTCTTT+TGG - chr1.3:1524295-1524314 MS.gene64187:intron 30.0%
! TATGCACAACATGAGTTTTT+CGG - chr1.3:1523830-1523849 MS.gene64187:intron 30.0%
! TCTATAAAGTTGATCCCATA+AGG + chr1.3:1525197-1525216 None:intergenic 30.0%
!! AAAACCAAAAGTACTATGTC+AGG + chr1.3:1525034-1525053 None:intergenic 30.0%
!!! AATCACAAAAGTTCTGGTTT+TGG - chr1.3:1523219-1523238 MS.gene64187:CDS 30.0%
!!! GACATAGTACTTTTGGTTTT+TGG - chr1.3:1525034-1525053 MS.gene64187:CDS 30.0%
!!! TGAATTCTCTTCTAGGATTT+TGG - chr1.3:1524365-1524384 MS.gene64187:CDS 30.0%
AACTTACATGATAAGGGGAA+GGG + chr1.3:1523407-1523426 None:intergenic 35.0%
ACAAATTCCGATATCCCTAA+AGG + chr1.3:1523588-1523607 None:intergenic 35.0%
ACATAGGAGAAGTTACTCAT+TGG - chr1.3:1524028-1524047 MS.gene64187:intron 35.0%
ATGCATACCATCTTTCAGTT+GGG + chr1.3:1524714-1524733 None:intergenic 35.0%
ATTCAGTACAATACGGTACT+TGG + chr1.3:1525063-1525082 None:intergenic 35.0%
ATTCTGCTATGCTATAGTGT+CGG - chr1.3:1525428-1525447 MS.gene64187:CDS 35.0%
CAGAGATCATTGAACAAGAT+TGG + chr1.3:1524984-1525003 None:intergenic 35.0%
CATATTGTCCTGTCAAATAG+CGG + chr1.3:1525360-1525379 None:intergenic 35.0%
CCAAGAGATTCAGTACAATA+CGG + chr1.3:1525070-1525089 None:intergenic 35.0%
CCTGAAAATCACAAAAGTTC+TGG - chr1.3:1523213-1523232 MS.gene64187:CDS 35.0%
CGTGTAAATGTGAAAGGAAT+AGG - chr1.3:1523918-1523937 MS.gene64187:intron 35.0%
GATAAACTGGTATTAGGGTT+AGG + chr1.3:1523261-1523280 None:intergenic 35.0%
GGCATAGGATTCAATTGAAT+TGG + chr1.3:1523165-1523184 None:intergenic 35.0%
GGGTTTGAACTTACATGATA+AGG + chr1.3:1523414-1523433 None:intergenic 35.0%
TAAAACACCAGAAATCAGCA+TGG - chr1.3:1524148-1524167 MS.gene64187:intron 35.0%
TAGTTTCTGTCTGAAGAGTT+TGG + chr1.3:1524461-1524480 None:intergenic 35.0%
TCAATTGCAGCACAAAATCA+AGG + chr1.3:1525631-1525650 None:intergenic 35.0%
TGATGGTTTAGGTGATAAAC+TGG + chr1.3:1523274-1523293 None:intergenic 35.0%
TGGAAATTTCTAAGCTGGTT+TGG + chr1.3:1525852-1525871 None:intergenic 35.0%
TTATTGCACTTGTCTACAGA+TGG - chr1.3:1524622-1524641 MS.gene64187:CDS 35.0%
TTCAGTACAATACGGTACTT+GGG + chr1.3:1525062-1525081 None:intergenic 35.0%
! AAAGATGTTTCTATGGAGGA+TGG - chr1.3:1523453-1523472 MS.gene64187:intron 35.0%
! AGATTGTGGAGGCATAAATT+GGG + chr1.3:1523307-1523326 None:intergenic 35.0%
! ATGCACAACATGAGTTTTTC+GGG - chr1.3:1523831-1523850 MS.gene64187:intron 35.0%
! CCAGAACTTTTGTGATTTTC+AGG + chr1.3:1523216-1523235 None:intergenic 35.0%
! TGTAAGTTCAAACCCCTTTT+CGG - chr1.3:1523419-1523438 MS.gene64187:intron 35.0%
! TTCAATTGAATTGGGGGTTT+TGG + chr1.3:1523156-1523175 None:intergenic 35.0%
! TTCGAAAGATGTTTCTATGG+AGG - chr1.3:1523449-1523468 MS.gene64187:intron 35.0%
!! TAAACTTGCTGAAATTGCTG+CGG - chr1.3:1524226-1524245 MS.gene64187:intron 35.0%
!! TTATCAGCATTTTTCAGCAC+TGG - chr1.3:1525483-1525502 MS.gene64187:CDS 35.0%
AAATGGTGAATTCAGCTCAC+AGG - chr1.3:1524178-1524197 MS.gene64187:intron 40.0%
AATTGGGGATAAGGAGATGA+TGG + chr1.3:1523291-1523310 None:intergenic 40.0%
ACTCAATGGTGGCAAAGAAA+AGG + chr1.3:1523379-1523398 None:intergenic 40.0%
ACTTACATGATAAGGGGAAG+GGG + chr1.3:1523406-1523425 None:intergenic 40.0%
AGGAATTACAGTGCTTCTGA+AGG + chr1.3:1525611-1525630 None:intergenic 40.0%
ATCAGCATGGAGTTTGGAAA+TGG - chr1.3:1524161-1524180 MS.gene64187:intron 40.0%
CAAATTGAGGCTTCAATCCT+TGG - chr1.3:1524679-1524698 MS.gene64187:CDS 40.0%
CAAGCCTTAGTCTACCTTAT+GGG - chr1.3:1525180-1525199 MS.gene64187:CDS 40.0%
CACAATCTCAAACTCATTCC+AGG - chr1.3:1523319-1523338 MS.gene64187:CDS 40.0%
CATAAGCTTCCTCCTTTACA+AGG - chr1.3:1524083-1524102 MS.gene64187:intron 40.0%
CATGCATACCATCTTTCAGT+TGG + chr1.3:1524715-1524734 None:intergenic 40.0%
CATTTCTGAATTGGAGCAGA+AGG - chr1.3:1524434-1524453 MS.gene64187:intron 40.0%
CCGTATTGTACTGAATCTCT+TGG - chr1.3:1525067-1525086 MS.gene64187:CDS 40.0%
CTACCATCCATTGAATTGCT+AGG + chr1.3:1524128-1524147 None:intergenic 40.0%
GAACTTACATGATAAGGGGA+AGG + chr1.3:1523408-1523427 None:intergenic 40.0%
GAGAGTCGTGTAAATGTGAA+AGG - chr1.3:1523912-1523931 MS.gene64187:intron 40.0%
GATGATACGCACCTGTAATT+TGG + chr1.3:1524505-1524524 None:intergenic 40.0%
GGAATTACAGTGCTTCTGAA+GGG + chr1.3:1525610-1525629 None:intergenic 40.0%
GTATTAGGGTTAGGGTATGA+AGG + chr1.3:1523252-1523271 None:intergenic 40.0%
GTCAGGCAGGAAGATTTAAA+AGG + chr1.3:1525017-1525036 None:intergenic 40.0%
GTGAAAGGAATAGGTGCTAA+GGG - chr1.3:1523927-1523946 MS.gene64187:intron 40.0%
TACTATAGCCGCTATTTGAC+AGG - chr1.3:1525349-1525368 MS.gene64187:CDS 40.0%
TCCTTCAACACCAACTGAAT+CGG + chr1.3:1523705-1523724 None:intergenic 40.0%
TGATCCCATAAGGTAGACTA+AGG + chr1.3:1525187-1525206 None:intergenic 40.0%
TGTGAAAGGAATAGGTGCTA+AGG - chr1.3:1523926-1523945 MS.gene64187:intron 40.0%
TTAGAGGAGAGAGTTTCGAT+GGG - chr1.3:1523745-1523764 MS.gene64187:intron 40.0%
TTCAGTGTTGTCAATCACAG+CGG - chr1.3:1525279-1525298 MS.gene64187:CDS 40.0%
TTTAGAGGAGAGAGTTTCGA+TGG - chr1.3:1523744-1523763 MS.gene64187:intron 40.0%
! AGAGAATGATGGAGCTGAAA+TGG - chr1.3:1523773-1523792 MS.gene64187:intron 40.0%
! CTGGAATGAGTTTGAGATTG+TGG + chr1.3:1523321-1523340 None:intergenic 40.0%
! GAATGAGTTTGAGATTGTGG+AGG + chr1.3:1523318-1523337 None:intergenic 40.0%
! GAGATTGTGGAGGCATAAAT+TGG + chr1.3:1523308-1523327 None:intergenic 40.0%
! GATTGTGGAGGCATAAATTG+GGG + chr1.3:1523306-1523325 None:intergenic 40.0%
! GCTCTGAATGAGACTTTGAA+TGG - chr1.3:1525708-1525727 MS.gene64187:CDS 40.0%
! GGATAAGGAGATGATGGTTT+AGG + chr1.3:1523285-1523304 None:intergenic 40.0%
! GGGTTCGAAAGATGTTTCTA+TGG - chr1.3:1523446-1523465 MS.gene64187:intron 40.0%
! TGATTCGCCTTTAGGGATAT+CGG - chr1.3:1523578-1523597 MS.gene64187:intron 40.0%
! TTATGAGAAGCCGATTCAGT+TGG - chr1.3:1523692-1523711 MS.gene64187:intron 40.0%
! TTCAAACCCCTTTTCGGAAT+CGG - chr1.3:1523425-1523444 MS.gene64187:intron 40.0%
! TTCCAATCGAAGCATCAGAA+TGG - chr1.3:1525942-1525961 MS.gene64187:CDS 40.0%
!! TCAGTTGGTGTTGAAGGATA+GGG - chr1.3:1523707-1523726 MS.gene64187:intron 40.0%
!! TTCAGTTGGTGTTGAAGGAT+AGG - chr1.3:1523706-1523725 MS.gene64187:intron 40.0%
!!! CAACATGAGTTTTTCGGGTA+TGG - chr1.3:1523836-1523855 MS.gene64187:intron 40.0%
AAGGATAGGGACTGTGTTGA+TGG - chr1.3:1523720-1523739 MS.gene64187:intron 45.0%
AATGGAGATATTGCTCCCAG+TGG - chr1.3:1524002-1524021 MS.gene64187:intron 45.0%
ACACTCGCCTAGCAATTCAA+TGG - chr1.3:1524118-1524137 MS.gene64187:intron 45.0%
AGACACACTGTAGCAGAACT+AGG - chr1.3:1525747-1525766 MS.gene64187:CDS 45.0%
AGACTTTGAATGGCGAAGTC+CGG - chr1.3:1525718-1525737 MS.gene64187:CDS 45.0%
AGTAGGTTGTGACAAAGACC+TGG + chr1.3:1523340-1523359 None:intergenic 45.0%
ATGGAAGATAGCAGAACCAG+TGG - chr1.3:1523855-1523874 MS.gene64187:intron 45.0%
ATTGTCTTCCGCCTCGTAAA+GGG - chr1.3:1523538-1523557 MS.gene64187:intron 45.0%
CAACAGTCCCAACTGAAAGA+TGG - chr1.3:1524704-1524723 MS.gene64187:intron 45.0%
CAATCACAGCGGAAAGTAGT+GGG - chr1.3:1525290-1525309 MS.gene64187:CDS 45.0%
CCAAGCCTTAGTCTACCTTA+TGG - chr1.3:1525179-1525198 MS.gene64187:CDS 45.0%
CCAGAAATCAGCATGGAGTT+TGG - chr1.3:1524155-1524174 MS.gene64187:intron 45.0%
CCATAAGGTAGACTAAGGCT+TGG + chr1.3:1525182-1525201 None:intergenic 45.0%
CCTATAGCACTGTAGCATAG+CGG + chr1.3:1525327-1525346 None:intergenic 45.0%
CGCTATGCTACAGTGCTATA+GGG - chr1.3:1525325-1525344 MS.gene64187:CDS 45.0%
CTAGCAGTGATTCGCCTTTA+GGG - chr1.3:1523571-1523590 MS.gene64187:intron 45.0%
CTATAGCACTGTAGCATAGC+GGG + chr1.3:1525326-1525345 None:intergenic 45.0%
GATGGGAGGAAAGAGAATGA+TGG - chr1.3:1523762-1523781 MS.gene64187:intron 45.0%
GCTGTGATTGACAACACTGA+AGG + chr1.3:1525280-1525299 None:intergenic 45.0%
GTTTCTATGGAGGATGGCTT+GGG - chr1.3:1523459-1523478 MS.gene64187:intron 45.0%
TCAATCACAGCGGAAAGTAG+TGG - chr1.3:1525289-1525308 MS.gene64187:CDS 45.0%
TCGCCTAGCAATTCAATGGA+TGG - chr1.3:1524122-1524141 MS.gene64187:intron 45.0%
TCTAGCAGTGATTCGCCTTT+AGG - chr1.3:1523570-1523589 MS.gene64187:intron 45.0%
TCTTACCTCTTTGCACGCTT+GGG + chr1.3:1524257-1524276 None:intergenic 45.0%
TGCCATTCTGATGCTTCGAT+TGG + chr1.3:1525947-1525966 None:intergenic 45.0%
TGTCAGTGATCGTCGGAATT+TGG - chr1.3:1523647-1523666 MS.gene64187:intron 45.0%
TTAGGGTTAGGGTATGAAGG+TGG + chr1.3:1523249-1523268 None:intergenic 45.0%
TTCGAACCCGATTCCGAAAA+GGG + chr1.3:1523435-1523454 None:intergenic 45.0%
TTCTTACCTCTTTGCACGCT+TGG + chr1.3:1524258-1524277 None:intergenic 45.0%
TTTCGAACCCGATTCCGAAA+AGG + chr1.3:1523436-1523455 None:intergenic 45.0%
! AGGATAGGGACTGTGTTGAT+GGG - chr1.3:1523721-1523740 MS.gene64187:intron 45.0%
! CCTGCCTGACATAGTACTTT+TGG - chr1.3:1525027-1525046 MS.gene64187:CDS 45.0%
! GATCGTCGGAATTTGGTTTC+TGG - chr1.3:1523654-1523673 MS.gene64187:intron 45.0%
! GGAGGCATAAATTGGGGATA+AGG + chr1.3:1523300-1523319 None:intergenic 45.0%
! GGAGTCAAGAGGAGTTCTAA+TGG - chr1.3:1523984-1524003 MS.gene64187:intron 45.0%
! TCAAACCCCTTTTCGGAATC+GGG - chr1.3:1523426-1523445 MS.gene64187:intron 45.0%
! TGAATCGGCTTCTCATAACC+AGG + chr1.3:1523690-1523709 None:intergenic 45.0%
! TGTTTCTATGGAGGATGGCT+TGG - chr1.3:1523458-1523477 MS.gene64187:intron 45.0%
! TTACAGTGCTTCTGAAGGGA+TGG + chr1.3:1525606-1525625 None:intergenic 45.0%
!! CCAAAAGTACTATGTCAGGC+AGG + chr1.3:1525030-1525049 None:intergenic 45.0%
!! CCAAACTCCATGCTGATTTC+TGG + chr1.3:1524158-1524177 None:intergenic 45.0%
!! GACTGTGTTGATGGGTTTAG+AGG - chr1.3:1523729-1523748 MS.gene64187:intron 45.0%
AAGCTGTTCGGATGAGAGGA+GGG - chr1.3:1523959-1523978 MS.gene64187:intron 50.0%
ACATGATAAGGGGAAGGGGA+AGG + chr1.3:1523402-1523421 None:intergenic 50.0%
ACTTCTCCTATGTCGACCAC+TGG + chr1.3:1524021-1524040 None:intergenic 50.0%
CACACTGTAGCAGAACTAGG+CGG - chr1.3:1525750-1525769 MS.gene64187:CDS 50.0%
CAGAACCAGTGGTTCGAAGA+CGG - chr1.3:1523866-1523885 MS.gene64187:intron 50.0%
CAGTTGGGACTGTTGTTCCA+AGG + chr1.3:1524699-1524718 None:intergenic 50.0%
CATGTTGAACAGCATGACCG+CGG + chr1.3:1523515-1523534 None:intergenic 50.0%
CATTGTCTTCCGCCTCGTAA+AGG - chr1.3:1523537-1523556 MS.gene64187:intron 50.0%
CCGCTATGCTACAGTGCTAT+AGG - chr1.3:1525324-1525343 MS.gene64187:CDS 50.0%
CTACAGTGTGTCTTAAGCGC+CGG + chr1.3:1525740-1525759 None:intergenic 50.0%
CTTCAAGCTGTTCGGATGAG+AGG - chr1.3:1523955-1523974 MS.gene64187:intron 50.0%
CTTCTCCTATGTCGACCACT+GGG + chr1.3:1524020-1524039 None:intergenic 50.0%
GCGGCTGGAAATTTCTAAGC+TGG + chr1.3:1525857-1525876 None:intergenic 50.0%
TCAATCAGCTGCTCGCTCAA+AGG - chr1.3:1524395-1524414 MS.gene64187:CDS 50.0%
TCGAACCCGATTCCGAAAAG+GGG + chr1.3:1523434-1523453 None:intergenic 50.0%
TCGAGCCATAAGACCTGAGA+GGG + chr1.3:1525784-1525803 None:intergenic 50.0%
TGACCAGGTCGACCTTGTAA+AGG + chr1.3:1524098-1524117 None:intergenic 50.0%
TGGTGAGTGTCAGTGATCGT+CGG - chr1.3:1523640-1523659 MS.gene64187:intron 50.0%
TGTTAACTCTGTGCCTCAGC+TGG - chr1.3:1523605-1523624 MS.gene64187:intron 50.0%
TTCAACCGTCTTCGAACCAC+TGG + chr1.3:1523874-1523893 None:intergenic 50.0%
! CGTCGGAATTTGGTTTCTGG+AGG - chr1.3:1523657-1523676 MS.gene64187:intron 50.0%
! GTTAGGCGAAGGTGCATGAT+GGG + chr1.3:1523493-1523512 None:intergenic 50.0%
! GTTTCTGGAGGAGAGAAACC+TGG - chr1.3:1523669-1523688 MS.gene64187:intron 50.0%
!! ATGGAGGATGGCTTGGGTTT+TGG - chr1.3:1523465-1523484 MS.gene64187:intron 50.0%
!! GCCGATTCAGTTGGTGTTGA+AGG - chr1.3:1523701-1523720 MS.gene64187:intron 50.0%
!! TCCTGAGAGACGCTGTTTTG+CGG + chr1.3:1525876-1525895 None:intergenic 50.0%
AGAGGAGGGAAGGAGTCAAG+AGG - chr1.3:1523973-1523992 MS.gene64187:intron 55.0%
CAAGCTGTTCGGATGAGAGG+AGG - chr1.3:1523958-1523977 MS.gene64187:intron 55.0%
CCAGGTCGACCTTGTAAAGG+AGG + chr1.3:1524095-1524114 None:intergenic 55.0%
CCTCCTTTACAAGGTCGACC+TGG - chr1.3:1524092-1524111 MS.gene64187:intron 55.0%
CGCGGTCATGCTGTTCAACA+TGG - chr1.3:1523513-1523532 MS.gene64187:intron 55.0%
CTGATCCCAAGCGTGCAAAG+AGG - chr1.3:1524249-1524268 MS.gene64187:intron 55.0%
GAAGGGGAAGGACTCAATGG+TGG + chr1.3:1523390-1523409 None:intergenic 55.0%
GAGGAGAGAGTTTCGATGGG+AGG - chr1.3:1523748-1523767 MS.gene64187:intron 55.0%
GCTGCGCCTGGAACATTTGT+TGG + chr1.3:1525821-1525840 None:intergenic 55.0%
GGGTGCGACTTCAAGCTGTT+CGG - chr1.3:1523947-1523966 MS.gene64187:intron 55.0%
GTCGAGCCATAAGACCTGAG+AGG + chr1.3:1525785-1525804 None:intergenic 55.0%
GTCTGCCCTCTCAGGTCTTA+TGG - chr1.3:1525776-1525795 MS.gene64187:CDS 55.0%
TGAACAGCATGACCGCGGTT+AGG + chr1.3:1523510-1523529 None:intergenic 55.0%
TGTTCGGATGAGAGGAGGGA+AGG - chr1.3:1523963-1523982 MS.gene64187:intron 55.0%
TTGCTCCCAGTGGTCGACAT+AGG - chr1.3:1524012-1524031 MS.gene64187:intron 55.0%
! CAGTGCTTCTGAAGGGATGG+TGG + chr1.3:1525603-1525622 None:intergenic 55.0%
! GCACTGTAGCATAGCGGGAT+TGG + chr1.3:1525321-1525340 None:intergenic 55.0%
! GGTTAGGCGAAGGTGCATGA+TGG + chr1.3:1523494-1523513 None:intergenic 55.0%
! TGCTTCTGAAGGGATGGTGG+TGG + chr1.3:1525600-1525619 None:intergenic 55.0%
! TTCCGCCTCGTAAAGGGCAT+AGG - chr1.3:1523544-1523563 MS.gene64187:intron 55.0%
!! TTGCTAGGCGAGTGTTGACC+AGG + chr1.3:1524113-1524132 None:intergenic 55.0%
AGCTGAGACGTCACCAGCTG+AGG + chr1.3:1523621-1523640 None:intergenic 60.0%
CAGCTGCTCGCTCAAAGGAG+CGG - chr1.3:1524400-1524419 MS.gene64187:CDS 60.0%
CATGCACCTTCGCCTAACCG+CGG - chr1.3:1523495-1523514 MS.gene64187:intron 60.0%
CGCCTATGCCCTTTACGAGG+CGG + chr1.3:1523549-1523568 None:intergenic 60.0%
GACCGCCTATGCCCTTTACG+AGG + chr1.3:1523552-1523571 None:intergenic 60.0%
GCCGCAAAACAGCGTCTCTC+AGG - chr1.3:1525872-1525891 MS.gene64187:CDS 60.0%
GGGGAAGGGGAAGGACTCAA+TGG + chr1.3:1523393-1523412 None:intergenic 60.0%
! CGCCTCGTAAAGGGCATAGG+CGG - chr1.3:1523547-1523566 MS.gene64187:intron 60.0%
! TCAGCTGGTGACGTCTCAGC+TGG - chr1.3:1523620-1523639 MS.gene64187:intron 60.0%
!! GAGAGACGCTGTTTTGCGGC+TGG + chr1.3:1525872-1525891 None:intergenic 60.0%
GCATGACCGCGGTTAGGCGA+AGG + chr1.3:1523504-1523523 None:intergenic 65.0%
TTGGCTGCTGATGCTGCGCC+TGG + chr1.3:1525833-1525852 None:intergenic 65.0%
GGCGGAGAGTCTGCCCTCTC+AGG - chr1.3:1525768-1525787 MS.gene64187:CDS 70.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 1523099 1525980 1523099 ID=MS.gene64187
chr1.3 mRNA 1523099 1525980 1523099 ID=MS.gene64187.t1;Parent=MS.gene64187
chr1.3 exon 1524809 1525980 1524809 ID=MS.gene64187.t1.exon1;Parent=MS.gene64187.t1
chr1.3 CDS 1524809 1525980 1524809 ID=cds.MS.gene64187.t1;Parent=MS.gene64187.t1
chr1.3 exon 1524567 1524699 1524567 ID=MS.gene64187.t1.exon2;Parent=MS.gene64187.t1
chr1.3 CDS 1524567 1524699 1524567 ID=cds.MS.gene64187.t1;Parent=MS.gene64187.t1
chr1.3 exon 1524354 1524438 1524354 ID=MS.gene64187.t1.exon3;Parent=MS.gene64187.t1
chr1.3 CDS 1524354 1524438 1524354 ID=cds.MS.gene64187.t1;Parent=MS.gene64187.t1
chr1.3 exon 1523099 1523370 1523099 ID=MS.gene64187.t1.exon4;Parent=MS.gene64187.t1
chr1.3 CDS 1523099 1523370 1523099 ID=cds.MS.gene64187.t1;Parent=MS.gene64187.t1
Gene Sequence

>MS.gene64187

ATGCATGAACGAATGGAGCGTTTTGATCAGAAAAAAGTTCATGCATTTGGTTCTCCAAAACCCCCAATTCAATTGAATCCTATGCCTATTAATCAAATTAATCAAATGGGTTTTCCTGAAAATCACAAAAGTTCTGGTTTTGGTATTCCACCTTCATACCCTAACCCTAATACCAGTTTATCACCTAAACCATCATCTCCTTATCCCCAATTTATGCCTCCACAATCTCAAACTCATTCCAGGTCTTTGTCACAACCTACTTTTTTATCTATTGATTCCTTTTCTTTGCCACCATTGAGTCCTTCCCCTTCCCCTTATCATGTAAGTTCAAACCCCTTTTCGGAATCGGGTTCGAAAGATGTTTCTATGGAGGATGGCTTGGGTTTTGGTGCCCATCATGCACCTTCGCCTAACCGCGGTCATGCTGTTCAACATGGTCATTGTCTTCCGCCTCGTAAAGGGCATAGGCGGTCTAGCAGTGATTCGCCTTTAGGGATATCGGAATTTGTTAACTCTGTGCCTCAGCTGGTGACGTCTCAGCTGGTGAGTGTCAGTGATCGTCGGAATTTGGTTTCTGGAGGAGAGAAACCTGGTTATGAGAAGCCGATTCAGTTGGTGTTGAAGGATAGGGACTGTGTTGATGGGTTTAGAGGAGAGAGTTTCGATGGGAGGAAAGAGAATGATGGAGCTGAAATGGATGATTTGTTTAGTGCTTACATGAATTTGGAGAATATGCACAACATGAGTTTTTCGGGTATGGAAGATAGCAGAACCAGTGGTTCGAAGACGGTTGAAAGCAGCGATAATGAAGCTGAGAGTCGTGTAAATGTGAAAGGAATAGGTGCTAAGGGTGCGACTTCAAGCTGTTCGGATGAGAGGAGGGAAGGAGTCAAGAGGAGTTCTAATGGAGATATTGCTCCCAGTGGTCGACATAGGAGAAGTTACTCATTGGATAGTTCCATTGAAAATTTTAATATTGAAGATCATAAGCTTCCTCCTTTACAAGGTCGACCTGGTCAACACTCGCCTAGCAATTCAATGGATGGTAGTAAAACACCAGAAATCAGCATGGAGTTTGGAAATGGTGAATTCAGCTCACAGGAGATGAAGAAAATAATGGAAAATGATAAACTTGCTGAAATTGCTGCGGCTGATCCCAAGCGTGCAAAGAGGTAAGAATTGTCTGTTCATTTCCCATATTTCCGTGTCTTTCTTTTGGAAAAAACATGAAAAAGTAAAACTTTAATAATGACTTATCATAAATGTTGAATTCTCTTCTAGGATTTTGGCTAATCGTCAATCAGCTGCTCGCTCAAAGGAGCGGAAGATGAAATACATTTCTGAATTGGAGCAGAAGGTCCAAACTCTTCAGACAGAAACTACTACTTTGTCTACTCAGTTTACCAAATTACAGGTGCGTATCATCTTAGTTGAAATGATGTTCCTTTTTCTTAAGTTTGTGAATTATATTTGATTTCCATATATCATGTATGCTGCTATTAATTCATTCATTCTTTACTTTTTTATTGCACTTGTCTACAGATGGATCATCAAGAGCTTAAAAGTGAGAATAAAGAGTACAAATTGAGGCTTCAATCCTTGGAACAACAGTCCCAACTGAAAGATGGTATGCATGTGCTTATTCCTTTTACTTTATGTTCTAGTTAGTTGATATTTTTCCTTGCAATCTATTTTTTTGAAATTGATAATTGTGTTATTTTTTATTTTTTTTTACATAGAAATAACTTGCATATATGATCGTGCTCAAAGATATGTGATTTTCTATATTTAGATGGATTTTATGTGGAATAACACTATTTAGCATATACTGTATGACAAATTTTGGTGTTTGAATATAGTAATTCAAATTTTGGTTTTTGATCCAATCTTGTTCAATGATCTCTGCGCAACTGCACCTTTTAAATCTTCCTGCCTGACATAGTACTTTTGGTTTTTGGAACCCAAGTACCGTATTGTACTGAATCTCTTGGTTGCATGTTATAACCTCTTTAAAACTGCATATACAAACTGTTTGAATGTAATATGGTTTTAGACTTCTGTTGAATAGCAACAACAATAACCAAGCCTTAGTCTACCTTATGGGATCAACTTTATAGATCAAATGACGTCATAATTCTCCATTTTAGTATCATGTATTAAGGTCAGTGATAAACTTTACCTTCAGTGTTGTCAATCACAGCGGAAAGTAGTGGGTTGTTCCAATCCCGCTATGCTACAGTGCTATAGGGCTACTATAGCCGCTATTTGACAGGACAATATGCTAAATAGCGTATGACAGAACAATAACAAACAAAAACTATTTATTTAAATTCTGCTATGCTATAGTGTCGGTATTTGACAACATTGTTTACCTATGAATCTCTTTATCAGCATTTTTCAGCACTGGATTTCATTATCAATGCATTATACACTTTAAGTAGCATCATTCTAAGACACCAGCAACATATTTTTTGATCTTGTTTCTACATATCTTCATGCCACCACCATCCCTTCAGAAGCACTGTAATTCCTTGATTTTGTGCTGCAATTGATTATCTTCACTGAACCAAATATTTAGCTATGTATTCATTTGTGTTCTTATTTTCGCAGCTCTGAATGAGACTTTGAATGGCGAAGTCCGGCGCTTAAGACACACTGTAGCAGAACTAGGCGGAGAGTCTGCCCTCTCAGGTCTTATGGCTCGACAGCTTGCTATTAACCAACAAATGTTCCAGGCGCAGCATCAGCAGCCAAACCAGCTTAGAAATTTCCAGCCGCAAAACAGCGTCTCTCAGGAAGAAACACAGACTCAGTCGCAGCAGCATATTCAACGCAATCATGAATTCCAATCGAAGCATCAGAATGGCAAAACCACTGCATAA
Protein sequence

>MS.gene64187.t1

MHERMERFDQKKVHAFGSPKPPIQLNPMPINQINQMGFPENHKSSGFGIPPSYPNPNTSLSPKPSSPYPQFMPPQSQTHSRSLSQPTFLSIDSFSLPPLSPSPSPYHVSSNPFSESGSKDVSMEDGLGFGAHHAPSPNRGHAVQHGHCLPPRKGHRRSSSDSPLGISEFVNSVPQLVTSQLVSVSDRRNLVSGGEKPGYEKPIQLVLKDRDCVDGFRGESFDGRKENDGAEMDDLFSAYMNLENMHNMSFSGMEDSRTSGSKTVESSDNEAESRVNVKGIGAKGATSSCSDERREGVKRSSNGDIAPSGRHRRSYSLDSSIENFNIEDHKLPPLQGRPGQHSPSNSMDGSKTPEISMEFGNGEFSSQEMKKIMENDKLAEIAAADPKRAKRILANRQSAARSKERKMKYISELEQKVQTLQTETTTLSTQFTKLQMDHQELKSENKEYKLRLQSLEQQSQLKDALNETLNGEVRRLRHTVAELGGESALSGLMARQLAINQQMFQAQHQQPNQLRNFQPQNSVSQEETQTQSQQHIQRNHEFQSKHQNGKTTA