Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64813.t1 | XP_003612246.1 | 99.6 | 234 | 1 | 0 | 1 | 234 | 1 | 234 | 5.00E-100 | 374 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64813.t1 | Q8GT75 | 82.1 | 151 | 26 | 1 | 85 | 234 | 86 | 236 | 1.4e-66 | 254.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64813.t1 | G7JYQ7 | 99.6 | 234 | 1 | 0 | 1 | 234 | 1 | 234 | 3.6e-100 | 374.0 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050081 | MS.gene64813 | 0.805742 | 1.15E-49 | -1.69E-46 |
MS.gene061188 | MS.gene64813 | 0.803632 | 3.18E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64813.t1 | MTR_5g022920 | 99.573 | 234 | 1 | 0 | 1 | 234 | 1 | 234 | 6.27e-171 | 470 |
MS.gene64813.t1 | MTR_8g074900 | 70.513 | 234 | 59 | 2 | 1 | 234 | 2 | 225 | 2.17e-113 | 324 |
MS.gene64813.t1 | MTR_4g108830 | 42.640 | 197 | 106 | 3 | 42 | 234 | 26 | 219 | 2.55e-47 | 156 |
MS.gene64813.t1 | MTR_4g108830 | 39.175 | 194 | 89 | 5 | 42 | 234 | 26 | 191 | 2.03e-37 | 129 |
MS.gene64813.t1 | MTR_5g092750 | 36.818 | 220 | 116 | 5 | 13 | 231 | 30 | 227 | 1.49e-31 | 115 |
MS.gene64813.t1 | MTR_5g092790 | 36.842 | 190 | 110 | 2 | 43 | 231 | 47 | 227 | 6.35e-30 | 111 |
MS.gene64813.t1 | MTR_5g082940 | 41.975 | 81 | 47 | 0 | 154 | 234 | 68 | 148 | 8.45e-18 | 78.2 |
MS.gene64813.t1 | MTR_1g492830 | 44.595 | 74 | 40 | 1 | 158 | 231 | 58 | 130 | 5.19e-17 | 77.4 |
MS.gene64813.t1 | MTR_3g094000 | 45.455 | 77 | 42 | 0 | 158 | 234 | 88 | 164 | 6.52e-17 | 75.9 |
MS.gene64813.t1 | MTR_4g120270 | 45.205 | 73 | 36 | 1 | 159 | 231 | 78 | 146 | 1.84e-16 | 76.6 |
MS.gene64813.t1 | MTR_8g071815 | 61.702 | 47 | 18 | 0 | 187 | 233 | 88 | 134 | 2.66e-16 | 74.3 |
MS.gene64813.t1 | MTR_7g079280 | 38.028 | 71 | 44 | 0 | 161 | 231 | 80 | 150 | 1.49e-15 | 72.4 |
MS.gene64813.t1 | MTR_5g026730 | 50.000 | 58 | 29 | 0 | 174 | 231 | 79 | 136 | 3.41e-15 | 71.2 |
MS.gene64813.t1 | MTR_4g063070 | 33.945 | 109 | 64 | 2 | 131 | 231 | 270 | 378 | 5.27e-15 | 73.6 |
MS.gene64813.t1 | MTR_7g117540 | 53.571 | 56 | 26 | 0 | 179 | 234 | 91 | 146 | 5.50e-15 | 72.8 |
MS.gene64813.t1 | MTR_7g116220 | 41.892 | 74 | 42 | 1 | 159 | 231 | 68 | 141 | 8.83e-15 | 70.5 |
MS.gene64813.t1 | MTR_2g436100 | 39.286 | 84 | 49 | 1 | 148 | 231 | 80 | 161 | 1.08e-14 | 72.0 |
MS.gene64813.t1 | MTR_5g030010 | 62.222 | 45 | 17 | 0 | 187 | 231 | 146 | 190 | 1.26e-14 | 72.4 |
MS.gene64813.t1 | MTR_8g066780 | 64.444 | 45 | 16 | 0 | 187 | 231 | 140 | 184 | 1.47e-14 | 72.0 |
MS.gene64813.t1 | MTR_2g041200 | 48.333 | 60 | 31 | 0 | 172 | 231 | 92 | 151 | 1.49e-14 | 69.7 |
MS.gene64813.t1 | MTR_5g064980 | 28.030 | 132 | 86 | 2 | 104 | 234 | 59 | 182 | 1.89e-14 | 72.0 |
MS.gene64813.t1 | MTR_8g099515 | 41.667 | 72 | 42 | 0 | 161 | 232 | 309 | 380 | 1.89e-14 | 72.0 |
MS.gene64813.t1 | MTR_3g067985 | 30.282 | 142 | 84 | 4 | 92 | 231 | 32 | 160 | 2.11e-14 | 69.3 |
MS.gene64813.t1 | MTR_5g024730 | 40.260 | 77 | 46 | 0 | 158 | 234 | 74 | 150 | 2.77e-14 | 69.7 |
MS.gene64813.t1 | MTR_1g014710 | 32.692 | 104 | 64 | 2 | 136 | 234 | 175 | 277 | 2.99e-14 | 70.9 |
MS.gene64813.t1 | MTR_6g007680 | 39.189 | 74 | 43 | 1 | 158 | 231 | 37 | 108 | 4.16e-14 | 67.8 |
MS.gene64813.t1 | MTR_3g091200 | 32.759 | 116 | 73 | 1 | 116 | 231 | 263 | 373 | 6.93e-14 | 70.5 |
MS.gene64813.t1 | MTR_1g100737 | 50.000 | 54 | 27 | 0 | 181 | 234 | 115 | 168 | 8.19e-14 | 68.2 |
MS.gene64813.t1 | MTR_8g089880 | 46.479 | 71 | 36 | 1 | 161 | 231 | 127 | 195 | 9.40e-14 | 69.3 |
MS.gene64813.t1 | MTR_6g087150 | 39.437 | 71 | 41 | 1 | 161 | 231 | 93 | 161 | 9.94e-14 | 70.1 |
MS.gene64813.t1 | MTR_7g076250 | 33.696 | 92 | 59 | 2 | 140 | 231 | 43 | 132 | 1.02e-13 | 67.8 |
MS.gene64813.t1 | MTR_2g055790 | 34.066 | 91 | 53 | 2 | 145 | 234 | 61 | 145 | 1.13e-13 | 67.8 |
MS.gene64813.t1 | MTR_2g009310 | 57.447 | 47 | 20 | 0 | 185 | 231 | 157 | 203 | 1.16e-13 | 69.7 |
MS.gene64813.t1 | MTR_5g064990 | 37.662 | 77 | 47 | 1 | 159 | 234 | 112 | 188 | 1.17e-13 | 69.7 |
MS.gene64813.t1 | MTR_8g092985 | 39.474 | 76 | 45 | 1 | 159 | 234 | 109 | 183 | 1.17e-13 | 67.8 |
MS.gene64813.t1 | MTR_3g099650 | 36.842 | 76 | 47 | 1 | 160 | 234 | 106 | 181 | 1.26e-13 | 69.7 |
MS.gene64813.t1 | MTR_8g092930 | 40.000 | 75 | 44 | 1 | 160 | 234 | 111 | 184 | 1.41e-13 | 67.8 |
MS.gene64813.t1 | MTR_4g093830 | 43.836 | 73 | 39 | 1 | 159 | 231 | 124 | 194 | 1.45e-13 | 69.3 |
MS.gene64813.t1 | MTR_3g464780 | 44.737 | 76 | 38 | 2 | 159 | 231 | 100 | 174 | 1.67e-13 | 68.2 |
MS.gene64813.t1 | MTR_8g093010 | 38.462 | 78 | 47 | 1 | 157 | 234 | 103 | 179 | 1.72e-13 | 67.8 |
MS.gene64813.t1 | MTR_3g116000 | 42.857 | 77 | 39 | 2 | 159 | 234 | 77 | 149 | 1.97e-13 | 67.0 |
MS.gene64813.t1 | MTR_3g086700 | 53.191 | 47 | 22 | 0 | 188 | 234 | 74 | 120 | 2.10e-13 | 66.6 |
MS.gene64813.t1 | MTR_1g074190 | 40.789 | 76 | 41 | 2 | 160 | 231 | 98 | 173 | 2.15e-13 | 68.9 |
MS.gene64813.t1 | MTR_3g078120 | 35.211 | 71 | 46 | 0 | 161 | 231 | 57 | 127 | 2.46e-13 | 65.9 |
MS.gene64813.t1 | MTR_7g116210 | 49.057 | 53 | 27 | 0 | 179 | 231 | 25 | 77 | 2.46e-13 | 64.7 |
MS.gene64813.t1 | MTR_1g043410 | 40.260 | 77 | 43 | 2 | 160 | 234 | 93 | 168 | 2.51e-13 | 68.6 |
MS.gene64813.t1 | MTR_5g009210 | 38.889 | 72 | 44 | 0 | 161 | 232 | 287 | 358 | 2.75e-13 | 68.6 |
MS.gene64813.t1 | MTR_3g110190 | 36.145 | 83 | 45 | 2 | 155 | 231 | 54 | 134 | 2.98e-13 | 68.6 |
MS.gene64813.t1 | MTR_3g071300 | 38.667 | 75 | 44 | 1 | 159 | 231 | 74 | 148 | 3.20e-13 | 65.9 |
MS.gene64813.t1 | MTR_5g064890 | 57.447 | 47 | 20 | 0 | 185 | 231 | 150 | 196 | 3.24e-13 | 68.2 |
MS.gene64813.t1 | MTR_5g026720 | 45.588 | 68 | 34 | 1 | 167 | 231 | 68 | 135 | 3.52e-13 | 65.5 |
MS.gene64813.t1 | MTR_3g091620 | 33.058 | 121 | 67 | 4 | 121 | 231 | 53 | 169 | 3.65e-13 | 68.2 |
MS.gene64813.t1 | MTR_8g073120 | 39.189 | 74 | 45 | 0 | 158 | 231 | 67 | 140 | 3.65e-13 | 66.6 |
MS.gene64813.t1 | MTR_7g073200 | 42.857 | 77 | 36 | 3 | 161 | 234 | 81 | 152 | 3.68e-13 | 65.9 |
MS.gene64813.t1 | MTR_3g086730 | 53.191 | 47 | 22 | 0 | 188 | 234 | 74 | 120 | 3.91e-13 | 67.0 |
MS.gene64813.t1 | MTR_7g116200 | 49.057 | 53 | 27 | 0 | 179 | 231 | 83 | 135 | 4.26e-13 | 65.5 |
MS.gene64813.t1 | MTR_1g070425 | 40.000 | 75 | 44 | 1 | 158 | 231 | 65 | 139 | 4.83e-13 | 65.5 |
MS.gene64813.t1 | MTR_3g114500 | 46.053 | 76 | 36 | 2 | 159 | 234 | 46 | 116 | 5.30e-13 | 64.3 |
MS.gene64813.t1 | MTR_8g092960 | 37.662 | 77 | 47 | 1 | 158 | 234 | 100 | 175 | 5.60e-13 | 66.2 |
MS.gene64813.t1 | MTR_2g096350 | 38.158 | 76 | 46 | 1 | 156 | 231 | 103 | 177 | 6.47e-13 | 65.9 |
MS.gene64813.t1 | MTR_5g009200 | 38.889 | 72 | 44 | 0 | 161 | 232 | 322 | 393 | 7.48e-13 | 67.4 |
MS.gene64813.t1 | MTR_8g092840 | 37.662 | 77 | 47 | 1 | 158 | 234 | 110 | 185 | 7.61e-13 | 65.9 |
MS.gene64813.t1 | MTR_8g099495 | 36.111 | 72 | 46 | 0 | 161 | 232 | 319 | 390 | 8.44e-13 | 67.4 |
MS.gene64813.t1 | MTR_5g009190 | 37.500 | 72 | 45 | 0 | 161 | 232 | 266 | 337 | 9.51e-13 | 67.0 |
MS.gene64813.t1 | MTR_7g116180 | 40.000 | 75 | 44 | 1 | 158 | 231 | 64 | 138 | 9.86e-13 | 64.7 |
MS.gene64813.t1 | MTR_1g051105 | 38.750 | 80 | 45 | 2 | 155 | 234 | 128 | 203 | 1.04e-12 | 65.9 |
MS.gene64813.t1 | MTR_5g066250 | 52.941 | 51 | 22 | 1 | 183 | 231 | 152 | 202 | 1.34e-12 | 66.6 |
MS.gene64813.t1 | MTR_8g028465 | 37.500 | 72 | 41 | 1 | 161 | 232 | 90 | 157 | 1.48e-12 | 64.7 |
MS.gene64813.t1 | MTR_5g071930 | 41.667 | 72 | 37 | 1 | 160 | 231 | 65 | 131 | 1.55e-12 | 64.7 |
MS.gene64813.t1 | MTR_3g078450 | 38.028 | 71 | 44 | 0 | 161 | 231 | 76 | 146 | 1.80e-12 | 64.7 |
MS.gene64813.t1 | MTR_7g113800 | 37.662 | 77 | 47 | 1 | 159 | 234 | 89 | 165 | 2.24e-12 | 65.9 |
MS.gene64813.t1 | MTR_1g082550 | 35.897 | 78 | 49 | 1 | 158 | 234 | 95 | 172 | 2.28e-12 | 65.9 |
MS.gene64813.t1 | MTR_3g067995 | 49.057 | 53 | 26 | 1 | 179 | 231 | 203 | 254 | 2.51e-12 | 65.1 |
MS.gene64813.t1 | MTR_3g078470 | 28.182 | 110 | 75 | 1 | 122 | 231 | 41 | 146 | 2.87e-12 | 64.3 |
MS.gene64813.t1 | MTR_4g106680 | 36.047 | 86 | 52 | 2 | 149 | 234 | 95 | 177 | 2.97e-12 | 65.1 |
MS.gene64813.t1 | MTR_6g055030 | 37.662 | 77 | 47 | 1 | 159 | 234 | 95 | 171 | 3.17e-12 | 65.1 |
MS.gene64813.t1 | MTR_8g023400 | 56.522 | 46 | 20 | 0 | 187 | 232 | 115 | 160 | 3.55e-12 | 65.1 |
MS.gene64813.t1 | MTR_2g097620 | 34.831 | 89 | 53 | 3 | 147 | 234 | 149 | 233 | 3.67e-12 | 65.1 |
MS.gene64813.t1 | MTR_4g129420 | 54.348 | 46 | 21 | 0 | 189 | 234 | 144 | 189 | 3.69e-12 | 65.5 |
MS.gene64813.t1 | MTR_1g056350 | 38.889 | 72 | 43 | 1 | 161 | 231 | 74 | 145 | 3.81e-12 | 62.8 |
MS.gene64813.t1 | MTR_6g007670 | 35.135 | 74 | 45 | 1 | 158 | 231 | 5 | 75 | 4.37e-12 | 64.3 |
MS.gene64813.t1 | MTR_7g079290 | 51.163 | 43 | 21 | 0 | 189 | 231 | 155 | 197 | 4.40e-12 | 63.5 |
MS.gene64813.t1 | MTR_4g030070 | 47.170 | 53 | 28 | 0 | 179 | 231 | 100 | 152 | 4.73e-12 | 63.9 |
MS.gene64813.t1 | MTR_2g079320 | 34.043 | 94 | 54 | 3 | 143 | 231 | 111 | 201 | 5.07e-12 | 63.2 |
MS.gene64813.t1 | MTR_4g056590 | 36.111 | 72 | 41 | 1 | 160 | 231 | 99 | 165 | 5.09e-12 | 63.2 |
MS.gene64813.t1 | MTR_3g072630 | 36.250 | 80 | 47 | 2 | 155 | 234 | 190 | 265 | 5.99e-12 | 64.3 |
MS.gene64813.t1 | MTR_5g034790 | 52.000 | 50 | 24 | 0 | 185 | 234 | 138 | 187 | 6.82e-12 | 64.7 |
MS.gene64813.t1 | MTR_3g072630 | 36.250 | 80 | 47 | 2 | 155 | 234 | 190 | 265 | 7.37e-12 | 64.3 |
MS.gene64813.t1 | MTR_1g070140 | 38.356 | 73 | 44 | 1 | 159 | 231 | 101 | 172 | 7.71e-12 | 64.3 |
MS.gene64813.t1 | MTR_3g095560 | 35.714 | 84 | 53 | 1 | 151 | 234 | 99 | 181 | 8.46e-12 | 63.2 |
MS.gene64813.t1 | MTR_6g079660 | 36.471 | 85 | 51 | 2 | 150 | 234 | 198 | 279 | 1.10e-11 | 63.9 |
MS.gene64813.t1 | MTR_3g100400 | 51.064 | 47 | 23 | 0 | 185 | 231 | 152 | 198 | 1.15e-11 | 63.9 |
MS.gene64813.t1 | MTR_2g090905 | 45.000 | 60 | 33 | 0 | 172 | 231 | 54 | 113 | 1.19e-11 | 60.5 |
MS.gene64813.t1 | MTR_4g094725 | 33.333 | 102 | 66 | 1 | 131 | 232 | 50 | 149 | 1.20e-11 | 61.2 |
MS.gene64813.t1 | MTR_7g059360 | 40.909 | 66 | 39 | 0 | 167 | 232 | 136 | 201 | 1.37e-11 | 62.4 |
MS.gene64813.t1 | MTR_8g092970 | 54.348 | 46 | 21 | 0 | 189 | 234 | 131 | 176 | 1.47e-11 | 62.4 |
MS.gene64813.t1 | MTR_2g090950 | 34.211 | 114 | 61 | 3 | 122 | 231 | 62 | 165 | 1.59e-11 | 62.4 |
MS.gene64813.t1 | MTR_5g088720 | 36.250 | 80 | 47 | 2 | 155 | 234 | 215 | 290 | 1.91e-11 | 63.2 |
MS.gene64813.t1 | MTR_3g083480 | 36.905 | 84 | 44 | 2 | 151 | 234 | 207 | 281 | 2.21e-11 | 63.2 |
MS.gene64813.t1 | MTR_1g026070 | 39.474 | 76 | 41 | 2 | 159 | 234 | 46 | 116 | 2.52e-11 | 59.7 |
MS.gene64813.t1 | MTR_5g088720 | 36.250 | 80 | 47 | 2 | 155 | 234 | 174 | 249 | 2.58e-11 | 62.8 |
MS.gene64813.t1 | MTR_8g092990 | 54.545 | 44 | 20 | 0 | 189 | 232 | 141 | 184 | 2.60e-11 | 61.6 |
MS.gene64813.t1 | MTR_8g063660 | 30.159 | 126 | 83 | 3 | 108 | 231 | 14 | 136 | 2.66e-11 | 62.8 |
MS.gene64813.t1 | MTR_5g088720 | 36.250 | 80 | 47 | 2 | 155 | 234 | 169 | 244 | 2.75e-11 | 62.4 |
MS.gene64813.t1 | MTR_8g019710 | 53.191 | 47 | 22 | 0 | 185 | 231 | 50 | 96 | 3.43e-11 | 59.7 |
MS.gene64813.t1 | MTR_5g041310 | 38.667 | 75 | 39 | 2 | 157 | 231 | 89 | 156 | 3.60e-11 | 61.2 |
MS.gene64813.t1 | MTR_5g041330 | 39.189 | 74 | 38 | 2 | 158 | 231 | 80 | 146 | 3.75e-11 | 61.2 |
MS.gene64813.t1 | MTR_8g032690 | 48.837 | 43 | 22 | 0 | 189 | 231 | 19 | 61 | 3.97e-11 | 58.5 |
MS.gene64813.t1 | MTR_6g055030 | 56.250 | 48 | 20 | 1 | 188 | 234 | 93 | 140 | 4.81e-11 | 61.6 |
MS.gene64813.t1 | MTR_1g047180 | 37.838 | 74 | 40 | 2 | 161 | 234 | 660 | 727 | 6.33e-11 | 62.0 |
MS.gene64813.t1 | MTR_3g068005 | 40.278 | 72 | 39 | 2 | 163 | 234 | 173 | 240 | 6.82e-11 | 61.6 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene64813.t1 | AT4G35840 | 78.539 | 219 | 46 | 1 | 17 | 234 | 18 | 236 | 3.94e-123 | 349 |
MS.gene64813.t1 | AT2G17730 | 78.341 | 217 | 46 | 1 | 19 | 234 | 25 | 241 | 2.26e-120 | 342 |
MS.gene64813.t1 | AT4G35840 | 68.526 | 251 | 46 | 2 | 17 | 234 | 18 | 268 | 4.62e-116 | 332 |
MS.gene64813.t1 | AT5G66070 | 76.056 | 213 | 47 | 1 | 22 | 234 | 13 | 221 | 3.66e-114 | 326 |
MS.gene64813.t1 | AT5G66070 | 76.056 | 213 | 47 | 1 | 22 | 234 | 13 | 221 | 3.66e-114 | 326 |
MS.gene64813.t1 | AT2G17730 | 78.261 | 207 | 44 | 1 | 19 | 224 | 25 | 231 | 1.68e-112 | 323 |
MS.gene64813.t1 | AT5G66070 | 68.354 | 237 | 47 | 2 | 22 | 234 | 13 | 245 | 1.35e-108 | 313 |
MS.gene64813.t1 | AT5G66070 | 74.269 | 171 | 40 | 1 | 24 | 194 | 15 | 181 | 1.50e-81 | 242 |
MS.gene64813.t1 | AT5G66070 | 65.128 | 195 | 40 | 2 | 24 | 194 | 15 | 205 | 7.75e-76 | 228 |
MS.gene64813.t1 | AT1G74410 | 39.000 | 200 | 120 | 1 | 33 | 232 | 22 | 219 | 6.78e-44 | 147 |
MS.gene64813.t1 | AT3G20395 | 34.921 | 189 | 110 | 4 | 47 | 234 | 40 | 216 | 4.06e-34 | 122 |
MS.gene64813.t1 | AT5G05280 | 49.333 | 75 | 27 | 2 | 160 | 234 | 95 | 158 | 1.14e-15 | 72.8 |
MS.gene64813.t1 | AT3G03550 | 59.574 | 47 | 19 | 0 | 185 | 231 | 155 | 201 | 1.60e-15 | 75.1 |
MS.gene64813.t1 | AT3G16720 | 40.541 | 74 | 41 | 1 | 158 | 231 | 91 | 161 | 3.56e-15 | 73.6 |
MS.gene64813.t1 | AT2G46493 | 35.366 | 82 | 53 | 0 | 150 | 231 | 99 | 180 | 5.80e-15 | 70.9 |
MS.gene64813.t1 | AT2G17450 | 39.560 | 91 | 45 | 2 | 154 | 234 | 57 | 147 | 6.03e-15 | 70.9 |
MS.gene64813.t1 | AT5G17600 | 62.791 | 43 | 16 | 0 | 189 | 231 | 142 | 184 | 6.17e-15 | 73.6 |
MS.gene64813.t1 | AT2G27940 | 41.667 | 72 | 39 | 1 | 160 | 231 | 114 | 182 | 1.17e-14 | 71.2 |
MS.gene64813.t1 | AT5G42200 | 42.667 | 75 | 41 | 1 | 160 | 234 | 77 | 149 | 1.36e-14 | 69.3 |
MS.gene64813.t1 | AT4G30370 | 39.726 | 73 | 42 | 1 | 159 | 231 | 87 | 157 | 2.13e-14 | 69.3 |
MS.gene64813.t1 | AT4G28890 | 42.254 | 71 | 39 | 1 | 161 | 231 | 97 | 165 | 2.74e-14 | 71.6 |
MS.gene64813.t1 | AT1G72200 | 41.558 | 77 | 44 | 1 | 159 | 234 | 113 | 189 | 2.87e-14 | 71.6 |
MS.gene64813.t1 | AT3G10910 | 37.624 | 101 | 46 | 3 | 145 | 234 | 65 | 159 | 3.03e-14 | 68.9 |
MS.gene64813.t1 | AT1G76410 | 36.559 | 93 | 58 | 1 | 142 | 234 | 58 | 149 | 3.13e-14 | 68.9 |
MS.gene64813.t1 | AT1G20823 | 39.744 | 78 | 46 | 1 | 157 | 234 | 80 | 156 | 4.04e-14 | 68.9 |
MS.gene64813.t1 | AT1G49200 | 41.558 | 77 | 42 | 2 | 159 | 234 | 107 | 181 | 4.68e-14 | 69.3 |
MS.gene64813.t1 | AT3G18773 | 40.741 | 81 | 45 | 2 | 155 | 234 | 97 | 175 | 6.10e-14 | 68.9 |
MS.gene64813.t1 | AT2G46494 | 35.366 | 82 | 53 | 0 | 150 | 231 | 277 | 358 | 8.64e-14 | 70.1 |
MS.gene64813.t1 | AT1G04360 | 41.026 | 78 | 41 | 1 | 159 | 231 | 99 | 176 | 9.18e-14 | 70.1 |
MS.gene64813.t1 | AT5G01880 | 40.541 | 74 | 42 | 1 | 161 | 234 | 79 | 150 | 1.09e-13 | 67.0 |
MS.gene64813.t1 | AT2G18670 | 41.096 | 73 | 42 | 1 | 159 | 231 | 81 | 152 | 1.70e-13 | 67.0 |
MS.gene64813.t1 | AT1G72220 | 53.191 | 47 | 22 | 0 | 185 | 231 | 173 | 219 | 1.77e-13 | 69.3 |
MS.gene64813.t1 | AT2G20030 | 40.845 | 71 | 40 | 1 | 161 | 231 | 98 | 166 | 2.36e-13 | 68.9 |
MS.gene64813.t1 | AT5G10380 | 60.000 | 45 | 18 | 0 | 187 | 231 | 133 | 177 | 2.41e-13 | 68.6 |
MS.gene64813.t1 | AT2G35910 | 35.294 | 102 | 60 | 2 | 132 | 231 | 92 | 189 | 2.41e-13 | 67.4 |
MS.gene64813.t1 | AT2G46160 | 37.179 | 78 | 43 | 1 | 161 | 232 | 104 | 181 | 2.53e-13 | 67.0 |
MS.gene64813.t1 | AT2G46160 | 37.179 | 78 | 43 | 1 | 161 | 232 | 104 | 181 | 2.53e-13 | 67.0 |
MS.gene64813.t1 | AT1G28040 | 31.579 | 95 | 65 | 0 | 137 | 231 | 201 | 295 | 2.64e-13 | 68.2 |
MS.gene64813.t1 | AT4G10150 | 54.348 | 46 | 21 | 0 | 189 | 234 | 111 | 156 | 2.72e-13 | 67.4 |
MS.gene64813.t1 | AT4G10160 | 54.348 | 46 | 21 | 0 | 189 | 234 | 97 | 142 | 3.21e-13 | 67.0 |
MS.gene64813.t1 | AT5G20910 | 35.227 | 88 | 53 | 2 | 150 | 234 | 188 | 274 | 3.86e-13 | 67.8 |
MS.gene64813.t1 | AT4G33565 | 59.574 | 47 | 19 | 0 | 185 | 231 | 213 | 259 | 3.99e-13 | 68.2 |
MS.gene64813.t1 | AT2G25410 | 33.333 | 111 | 64 | 3 | 126 | 233 | 268 | 371 | 4.54e-13 | 68.2 |
MS.gene64813.t1 | AT4G15975 | 55.556 | 45 | 20 | 0 | 187 | 231 | 74 | 118 | 5.92e-13 | 66.6 |
MS.gene64813.t1 | AT3G05200 | 37.975 | 79 | 48 | 1 | 157 | 234 | 95 | 173 | 6.89e-13 | 67.8 |
MS.gene64813.t1 | AT2G35000 | 39.241 | 79 | 43 | 2 | 159 | 234 | 104 | 180 | 7.33e-13 | 67.4 |
MS.gene64813.t1 | AT5G53110 | 36.620 | 71 | 45 | 0 | 161 | 231 | 302 | 372 | 7.77e-13 | 67.4 |
MS.gene64813.t1 | AT4G40070 | 40.580 | 69 | 34 | 1 | 166 | 234 | 108 | 169 | 8.30e-13 | 67.0 |
MS.gene64813.t1 | AT3G56580 | 40.580 | 69 | 38 | 2 | 166 | 234 | 165 | 230 | 8.49e-13 | 67.0 |
MS.gene64813.t1 | AT3G56580 | 40.580 | 69 | 38 | 2 | 166 | 234 | 165 | 230 | 8.49e-13 | 67.0 |
MS.gene64813.t1 | AT3G56580 | 40.580 | 69 | 38 | 2 | 166 | 234 | 165 | 230 | 8.49e-13 | 67.0 |
MS.gene64813.t1 | AT4G26580 | 40.698 | 86 | 43 | 4 | 155 | 234 | 250 | 333 | 8.84e-13 | 67.0 |
MS.gene64813.t1 | AT4G26580 | 40.698 | 86 | 43 | 4 | 155 | 234 | 250 | 333 | 8.84e-13 | 67.0 |
MS.gene64813.t1 | AT1G14200 | 32.955 | 88 | 52 | 3 | 150 | 234 | 70 | 153 | 1.02e-12 | 64.7 |
MS.gene64813.t1 | AT4G09100 | 36.986 | 73 | 45 | 1 | 160 | 231 | 55 | 127 | 1.18e-12 | 63.5 |
MS.gene64813.t1 | AT1G53010 | 36.145 | 83 | 48 | 2 | 157 | 234 | 93 | 175 | 1.26e-12 | 64.7 |
MS.gene64813.t1 | AT3G18930 | 60.465 | 43 | 17 | 0 | 189 | 231 | 156 | 198 | 1.66e-12 | 66.6 |
MS.gene64813.t1 | AT3G18930 | 60.465 | 43 | 17 | 0 | 189 | 231 | 156 | 198 | 1.66e-12 | 66.6 |
MS.gene64813.t1 | AT3G18930 | 60.465 | 43 | 17 | 0 | 189 | 231 | 156 | 198 | 1.66e-12 | 66.6 |
MS.gene64813.t1 | AT1G49220 | 38.462 | 78 | 47 | 1 | 157 | 234 | 104 | 180 | 1.78e-12 | 65.5 |
MS.gene64813.t1 | AT2G46495 | 48.077 | 52 | 27 | 0 | 180 | 231 | 311 | 362 | 2.01e-12 | 66.2 |
MS.gene64813.t1 | AT2G46495 | 48.077 | 52 | 27 | 0 | 180 | 231 | 283 | 334 | 2.33e-12 | 65.9 |
MS.gene64813.t1 | AT3G48030 | 37.209 | 86 | 52 | 2 | 149 | 234 | 91 | 174 | 2.73e-12 | 65.1 |
MS.gene64813.t1 | AT5G06490 | 36.842 | 76 | 43 | 1 | 161 | 231 | 96 | 171 | 2.78e-12 | 63.9 |
MS.gene64813.t1 | AT5G43420 | 55.814 | 43 | 19 | 0 | 189 | 231 | 138 | 180 | 2.85e-12 | 65.9 |
MS.gene64813.t1 | AT3G48030 | 37.209 | 86 | 52 | 2 | 149 | 234 | 169 | 252 | 3.11e-12 | 65.5 |
MS.gene64813.t1 | AT3G61550 | 35.000 | 80 | 43 | 1 | 161 | 231 | 99 | 178 | 3.11e-12 | 63.9 |
MS.gene64813.t1 | AT2G18650 | 54.348 | 46 | 21 | 0 | 189 | 234 | 126 | 171 | 3.81e-12 | 65.5 |
MS.gene64813.t1 | AT5G07040 | 32.258 | 93 | 61 | 1 | 141 | 231 | 44 | 136 | 4.05e-12 | 62.8 |
MS.gene64813.t1 | AT1G72310 | 36.364 | 77 | 46 | 1 | 155 | 231 | 96 | 169 | 4.62e-12 | 64.7 |
MS.gene64813.t1 | AT1G33480 | 53.488 | 43 | 20 | 0 | 189 | 231 | 100 | 142 | 4.62e-12 | 64.3 |
MS.gene64813.t1 | AT4G17905 | 45.000 | 60 | 31 | 1 | 172 | 231 | 140 | 197 | 4.95e-12 | 64.7 |
MS.gene64813.t1 | AT1G22500 | 38.667 | 75 | 45 | 1 | 161 | 234 | 89 | 163 | 5.16e-12 | 65.1 |
MS.gene64813.t1 | AT4G17905 | 45.000 | 60 | 31 | 1 | 172 | 231 | 166 | 223 | 5.17e-12 | 64.7 |
MS.gene64813.t1 | AT1G53820 | 53.333 | 45 | 21 | 0 | 187 | 231 | 118 | 162 | 5.35e-12 | 64.7 |
MS.gene64813.t1 | AT1G49210 | 40.260 | 77 | 43 | 2 | 159 | 234 | 106 | 180 | 5.51e-12 | 63.5 |
MS.gene64813.t1 | AT3G19950 | 34.118 | 85 | 53 | 2 | 150 | 234 | 237 | 318 | 6.74e-12 | 64.7 |
MS.gene64813.t1 | AT3G19950 | 34.118 | 85 | 53 | 2 | 150 | 234 | 237 | 318 | 6.74e-12 | 64.7 |
MS.gene64813.t1 | AT4G30400 | 55.814 | 43 | 19 | 0 | 189 | 231 | 134 | 176 | 7.83e-12 | 64.7 |
MS.gene64813.t1 | AT3G19950 | 34.118 | 85 | 53 | 2 | 150 | 234 | 179 | 260 | 9.03e-12 | 63.9 |
MS.gene64813.t1 | AT1G60360 | 36.250 | 80 | 48 | 2 | 155 | 234 | 192 | 268 | 1.14e-11 | 63.9 |
MS.gene64813.t1 | AT2G34000 | 36.000 | 75 | 46 | 1 | 160 | 232 | 60 | 134 | 1.15e-11 | 61.2 |
MS.gene64813.t1 | AT5G27420 | 35.065 | 77 | 49 | 1 | 159 | 234 | 93 | 169 | 1.16e-11 | 63.9 |
MS.gene64813.t1 | AT2G40830 | 37.681 | 69 | 40 | 2 | 166 | 234 | 169 | 234 | 1.60e-11 | 63.2 |
MS.gene64813.t1 | AT2G40830 | 37.681 | 69 | 40 | 2 | 166 | 234 | 169 | 234 | 1.60e-11 | 63.2 |
MS.gene64813.t1 | AT2G40830 | 37.681 | 69 | 40 | 2 | 166 | 234 | 169 | 234 | 1.60e-11 | 63.2 |
MS.gene64813.t1 | AT2G40830 | 37.681 | 69 | 40 | 2 | 166 | 234 | 169 | 234 | 1.60e-11 | 63.2 |
MS.gene64813.t1 | AT1G23980 | 32.653 | 98 | 63 | 2 | 134 | 231 | 92 | 186 | 1.62e-11 | 63.5 |
MS.gene64813.t1 | AT5G57750 | 52.273 | 44 | 21 | 0 | 188 | 231 | 121 | 164 | 1.91e-11 | 62.0 |
MS.gene64813.t1 | AT4G24015 | 43.333 | 60 | 34 | 0 | 172 | 231 | 88 | 147 | 2.26e-11 | 60.8 |
MS.gene64813.t1 | AT4G09120 | 33.708 | 89 | 50 | 2 | 151 | 234 | 84 | 168 | 2.55e-11 | 62.8 |
MS.gene64813.t1 | AT4G09110 | 35.955 | 89 | 48 | 2 | 151 | 234 | 84 | 168 | 2.83e-11 | 62.4 |
MS.gene64813.t1 | AT2G44330 | 35.484 | 93 | 55 | 3 | 145 | 234 | 50 | 140 | 2.91e-11 | 60.8 |
MS.gene64813.t1 | AT5G05810 | 50.980 | 51 | 23 | 1 | 183 | 231 | 138 | 188 | 2.97e-11 | 62.8 |
MS.gene64813.t1 | AT2G34990 | 50.000 | 48 | 24 | 0 | 187 | 234 | 116 | 163 | 3.19e-11 | 62.4 |
MS.gene64813.t1 | AT1G04790 | 38.028 | 71 | 38 | 2 | 161 | 231 | 566 | 630 | 3.19e-11 | 63.2 |
MS.gene64813.t1 | AT5G47610 | 32.500 | 80 | 53 | 1 | 155 | 234 | 74 | 152 | 3.22e-11 | 60.5 |
MS.gene64813.t1 | AT5G56340 | 36.471 | 85 | 45 | 2 | 150 | 234 | 228 | 303 | 3.82e-11 | 62.4 |
MS.gene64813.t1 | AT2G34990 | 50.000 | 48 | 24 | 0 | 187 | 234 | 94 | 141 | 3.84e-11 | 62.0 |
MS.gene64813.t1 | AT1G35330 | 35.366 | 82 | 52 | 1 | 154 | 234 | 93 | 174 | 4.15e-11 | 62.0 |
MS.gene64813.t1 | AT4G26400 | 41.176 | 68 | 31 | 2 | 167 | 234 | 227 | 285 | 5.27e-11 | 62.0 |
MS.gene64813.t1 | AT4G26400 | 41.176 | 68 | 31 | 2 | 167 | 234 | 227 | 285 | 5.27e-11 | 62.0 |
MS.gene64813.t1 | AT1G49230 | 50.980 | 51 | 25 | 0 | 184 | 234 | 126 | 176 | 5.62e-11 | 60.8 |
MS.gene64813.t1 | AT3G10815 | 31.183 | 93 | 60 | 2 | 142 | 234 | 77 | 165 | 5.87e-11 | 60.5 |
MS.gene64813.t1 | AT2G47560 | 43.077 | 65 | 37 | 0 | 167 | 231 | 86 | 150 | 7.02e-11 | 60.5 |
MS.gene64813.t1 | AT4G35480 | 37.079 | 89 | 43 | 2 | 159 | 234 | 70 | 158 | 7.12e-11 | 60.1 |
MS.gene64813.t1 | AT3G55530 | 44.444 | 54 | 29 | 1 | 178 | 231 | 200 | 252 | 8.11e-11 | 60.8 |
MS.gene64813.t1 | AT4G38140 | 50.000 | 48 | 23 | 1 | 185 | 231 | 58 | 105 | 9.32e-11 | 58.5 |
MS.gene64813.t1 | AT2G44578 | 44.643 | 56 | 28 | 1 | 182 | 234 | 60 | 115 | 9.90e-11 | 58.5 |
Find 54 sgRNAs with CRISPR-Local
Find 102 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TCTTCTTTGTTCGGTTCTTT+TGG | 0.184520 | 5.1:-13805697 | MS.gene64813:CDS |
TTGAATCATCCCTTGTTCTT+TGG | 0.242713 | 5.1:-13805027 | MS.gene64813:CDS |
GTTGACAAAGTTAAACAATT+TGG | 0.246551 | 5.1:-13805667 | MS.gene64813:CDS |
TATGCAGTTGGAACATTATT+GGG | 0.267904 | 5.1:-13805151 | MS.gene64813:intron |
CTTTGGCATTCTGATGAATC+TGG | 0.268428 | 5.1:-13805010 | MS.gene64813:CDS |
CAAAATCACTGCTGACAATA+TGG | 0.283427 | 5.1:-13804522 | MS.gene64813:CDS |
TACAGATCCCTTCTGCATAA+TGG | 0.286937 | 5.1:+13804235 | None:intergenic |
CTCGCAATTTCTGTTATCAT+TGG | 0.306616 | 5.1:-13805640 | MS.gene64813:CDS |
TTATGCAGTTGGAACATTAT+TGG | 0.308342 | 5.1:-13805152 | MS.gene64813:intron |
CATTCTGATGAATCTGGAAT+TGG | 0.345918 | 5.1:-13805004 | MS.gene64813:CDS |
CCTTCTCGTTCTTCTTTGTT+CGG | 0.352151 | 5.1:-13805706 | MS.gene64813:CDS |
ACAGATCCCTTCTGCATAAT+GGG | 0.371614 | 5.1:+13804236 | None:intergenic |
TGAACAGCACTCAACATTGC+AGG | 0.404709 | 5.1:+13804751 | None:intergenic |
ACCTCGAATGAAACCGCTTT+CGG | 0.406134 | 5.1:+13805096 | None:intergenic |
GCTGCCGTTGGTGCTATATC+AGG | 0.409617 | 5.1:-13805073 | MS.gene64813:CDS |
GAACGAGAAGGACATGGATT+TGG | 0.415770 | 5.1:+13805718 | None:intergenic |
GCTTTGACAGGAGCTTTGAT+AGG | 0.421666 | 5.1:-13805127 | MS.gene64813:CDS |
TTCTTGTTCAGTTTGTCTCC+AGG | 0.423090 | 5.1:-13804480 | MS.gene64813:intron |
GACAGGAGCTTTGATAGGTC+AGG | 0.430363 | 5.1:-13805122 | MS.gene64813:CDS |
ACATTATTGGGTGCTTTGAC+AGG | 0.432101 | 5.1:-13805139 | MS.gene64813:CDS |
CAAAGGGTTATCCGTAGATT+CGG | 0.437753 | 5.1:-13804564 | MS.gene64813:CDS |
ATCTACCTTGCATAGATATG+TGG | 0.445633 | 5.1:-13804279 | MS.gene64813:CDS |
GCTGACAATATGGAGGCATC+AGG | 0.449417 | 5.1:-13804512 | MS.gene64813:CDS |
CGAATCTACGGATAACCCTT+TGG | 0.456589 | 5.1:+13804565 | None:intergenic |
CAAAACATCTTTGACATTGG+TGG | 0.466592 | 5.1:-13804590 | MS.gene64813:CDS |
GTTCAAAACATCTTTGACAT+TGG | 0.469459 | 5.1:-13804593 | MS.gene64813:CDS |
ACCGAAAGCGGTTTCATTCG+AGG | 0.472995 | 5.1:-13805097 | MS.gene64813:CDS |
TTCATTCGAGGTGCTGCCGT+TGG | 0.491747 | 5.1:-13805085 | MS.gene64813:CDS |
TGTTTCCAGGACTTTCAACT+TGG | 0.497160 | 5.1:-13804343 | MS.gene64813:intron |
GTTGAGTGCTGTTCAAAGTC+AGG | 0.500376 | 5.1:-13804743 | MS.gene64813:intron |
CATCAGAATGCCAAAGAACA+AGG | 0.502078 | 5.1:+13805017 | None:intergenic |
TTTGACATTGGTGGTTCCAA+AGG | 0.524386 | 5.1:-13804581 | MS.gene64813:CDS |
TTGACATTGGTGGTTCCAAA+GGG | 0.534675 | 5.1:-13804580 | MS.gene64813:CDS |
GATCTTTGAAACCGAATCTA+CGG | 0.536314 | 5.1:+13804553 | None:intergenic |
CTGACAATATGGAGGCATCA+GGG | 0.538346 | 5.1:-13804511 | MS.gene64813:CDS |
AGACTTGTGCGTGAGAGGAT+AGG | 0.548829 | 5.1:-13804775 | MS.gene64813:CDS |
TTATTGTTAGCTTGTTGAGT+GGG | 0.550368 | 5.1:-13804798 | MS.gene64813:CDS |
GTTCTTGCCCATTATGCAGA+AGG | 0.553778 | 5.1:-13804243 | MS.gene64813:CDS |
GTTATTGTTAGCTTGTTGAG+TGG | 0.587696 | 5.1:-13804799 | MS.gene64813:CDS |
CAATGATAACAGAAATTGCG+AGG | 0.591128 | 5.1:+13805641 | None:intergenic |
AGCTCCTGATATAGCACCAA+CGG | 0.599233 | 5.1:+13805069 | None:intergenic |
AAAGAAGAACGAGAAGGACA+TGG | 0.601349 | 5.1:+13805712 | None:intergenic |
CAAACCTAATGCAAAACAGA+AGG | 0.616968 | 5.1:+13805594 | None:intergenic |
TTCTTGCCCATTATGCAGAA+GGG | 0.619811 | 5.1:-13804242 | MS.gene64813:CDS |
AAAAGCCACATATCTATGCA+AGG | 0.625321 | 5.1:+13804274 | None:intergenic |
TGTTGAAACAAGCTTTGACG+AGG | 0.632593 | 5.1:-13804615 | MS.gene64813:CDS |
ATCAGAATGCCAAAGAACAA+GGG | 0.633081 | 5.1:+13805018 | None:intergenic |
GTGGGAGACTTGTGCGTGAG+AGG | 0.638826 | 5.1:-13804780 | MS.gene64813:CDS |
TGACAATATGGAGGCATCAG+GGG | 0.638879 | 5.1:-13804510 | MS.gene64813:CDS |
CCGAACAAAGAAGAACGAGA+AGG | 0.645534 | 5.1:+13805706 | None:intergenic |
ATAGGTCAGGAGACCGAAAG+CGG | 0.666229 | 5.1:-13805109 | MS.gene64813:CDS |
AATGATAACAGAAATTGCGA+GGG | 0.676404 | 5.1:+13805642 | None:intergenic |
AATCACTGCTGACAATATGG+AGG | 0.690081 | 5.1:-13804519 | MS.gene64813:CDS |
TGAAACATGTGATGACAATG+AGG | 0.720588 | 5.1:+13804301 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATGATAAATAATAACTCAAA+AGG | + | chr5.1:13805082-13805101 | None:intergenic | 15.0% |
!! | TGATAAATAATAACTCAAAA+GGG | + | chr5.1:13805081-13805100 | None:intergenic | 15.0% |
!!! | TTTATATGTTTGAAGTTTTA+AGG | - | chr5.1:13804731-13804750 | MS.gene64813:intron | 15.0% |
!!! | TTTATGATATTTTGAAGATT+GGG | - | chr5.1:13804581-13804600 | MS.gene64813:CDS | 15.0% |
!!! | TTTTGTTTGTTTTTTGAATA+AGG | - | chr5.1:13804770-13804789 | MS.gene64813:CDS | 15.0% |
!!! | TTTTTTGAATAAGGTTTAAT+GGG | - | chr5.1:13804779-13804798 | MS.gene64813:CDS | 15.0% |
!! | AACAAAATTCACAAAATTGT+AGG | - | chr5.1:13804660-13804679 | MS.gene64813:intron | 20.0% |
!! | TAGAAGAAAAAATGAAACTT+GGG | - | chr5.1:13804551-13804570 | MS.gene64813:CDS | 20.0% |
!! | TTAGAAGAAAAAATGAAACT+TGG | - | chr5.1:13804550-13804569 | MS.gene64813:CDS | 20.0% |
!!! | ATTTATGATCTTCTATTTCT+TGG | - | chr5.1:13804685-13804704 | MS.gene64813:intron | 20.0% |
!!! | GATTTGATTTTGATTGATAT+TGG | - | chr5.1:13805579-13805598 | MS.gene64813:intron | 20.0% |
!!! | GTTTATGATATTTTGAAGAT+TGG | - | chr5.1:13804580-13804599 | MS.gene64813:CDS | 20.0% |
!!! | GTTTTTTGAATAAGGTTTAA+TGG | - | chr5.1:13804778-13804797 | MS.gene64813:CDS | 20.0% |
!!! | TGTTCAAAAGGATTTTATTA+AGG | - | chr5.1:13805255-13805274 | MS.gene64813:intron | 20.0% |
!!! | TTACACTTTTTTTATCAGAT+GGG | - | chr5.1:13805323-13805342 | MS.gene64813:intron | 20.0% |
!!! | TTTGAAGTTTTAAGGTTTAA+TGG | - | chr5.1:13804739-13804758 | MS.gene64813:intron | 20.0% |
! | GTTGACAAAGTTAAACAATT+TGG | - | chr5.1:13804297-13804316 | MS.gene64813:CDS | 25.0% |
!! | AATTGGTTGTCTTTTATACT+TGG | - | chr5.1:13804977-13804996 | MS.gene64813:intron | 25.0% |
!! | GGATTTTCAACATTTATATG+TGG | - | chr5.1:13804706-13804725 | MS.gene64813:intron | 25.0% |
!! | GTTTGGATTTTTCATTGTTT+GGG | - | chr5.1:13804603-13804622 | MS.gene64813:CDS | 25.0% |
!! | TATTGGCATTTTCTGATTAT+TGG | - | chr5.1:13805596-13805615 | MS.gene64813:intron | 25.0% |
!!! | CTTACACTTTTTTTATCAGA+TGG | - | chr5.1:13805322-13805341 | MS.gene64813:intron | 25.0% |
!!! | GTACTTTTGTTTTGTTCAAA+AGG | - | chr5.1:13805243-13805262 | MS.gene64813:intron | 25.0% |
!!! | TGATCTTTTTGTGTTGTTTT+GGG | - | chr5.1:13804427-13804446 | MS.gene64813:intron | 25.0% |
!!! | TTGATCTTTTTGTGTTGTTT+TGG | - | chr5.1:13804426-13804445 | MS.gene64813:intron | 25.0% |
AAGAAAAAATGAAACTTGGG+AGG | - | chr5.1:13804554-13804573 | MS.gene64813:CDS | 30.0% | |
AATGATAACAGAAATTGCGA+GGG | + | chr5.1:13804325-13804344 | None:intergenic | 30.0% | |
ATCAATCTGCATAACTCAAA+AGG | + | chr5.1:13805145-13805164 | None:intergenic | 30.0% | |
GTTCAAAACATCTTTGACAT+TGG | - | chr5.1:13805371-13805390 | MS.gene64813:intron | 30.0% | |
TATGCAGTTGGAACATTATT+GGG | - | chr5.1:13804813-13804832 | MS.gene64813:intron | 30.0% | |
TTATGCAGTTGGAACATTAT+TGG | - | chr5.1:13804812-13804831 | MS.gene64813:intron | 30.0% | |
! | GGTTTGGATTTTTCATTGTT+TGG | - | chr5.1:13804602-13804621 | MS.gene64813:CDS | 30.0% |
!! | GATATTTTGAAGATTGGGTT+TGG | - | chr5.1:13804586-13804605 | MS.gene64813:CDS | 30.0% |
!! | TTATTGTTAGCTTGTTGAGT+GGG | - | chr5.1:13805166-13805185 | MS.gene64813:intron | 30.0% |
!!! | CAGCAGTGATTTTGATTTTT+GGG | + | chr5.1:13805436-13805455 | None:intergenic | 30.0% |
!!! | GTTGTTTTGTTTTATGCAGT+TGG | - | chr5.1:13804801-13804820 | MS.gene64813:CDS | 30.0% |
!!! | TCAGCAGTGATTTTGATTTT+TGG | + | chr5.1:13805437-13805456 | None:intergenic | 30.0% |
!!! | TGTGTTGTTTTGGGTTTTTT+GGG | - | chr5.1:13804436-13804455 | MS.gene64813:intron | 30.0% |
!!! | TTGTGTTGTTTTGGGTTTTT+TGG | - | chr5.1:13804435-13804454 | MS.gene64813:intron | 30.0% |
AAAAAATGAAACTTGGGAGG+TGG | - | chr5.1:13804557-13804576 | MS.gene64813:CDS | 35.0% | |
AAAAATGAAACTTGGGAGGT+GGG | - | chr5.1:13804558-13804577 | MS.gene64813:CDS | 35.0% | |
AAAAGCCACATATCTATGCA+AGG | + | chr5.1:13805693-13805712 | None:intergenic | 35.0% | |
AAAGTGCAAAAAAACCAACC+TGG | + | chr5.1:13805505-13805524 | None:intergenic | 35.0% | |
AGAACACTTTGTTCATGTCA+TGG | + | chr5.1:13805554-13805573 | None:intergenic | 35.0% | |
ATCAGAATGCCAAAGAACAA+GGG | + | chr5.1:13804949-13804968 | None:intergenic | 35.0% | |
ATCTACCTTGCATAGATATG+TGG | - | chr5.1:13805685-13805704 | MS.gene64813:CDS | 35.0% | |
CAAAACATCTTTGACATTGG+TGG | - | chr5.1:13805374-13805393 | MS.gene64813:intron | 35.0% | |
CAAAATCACTGCTGACAATA+TGG | - | chr5.1:13805442-13805461 | MS.gene64813:intron | 35.0% | |
CAAACCTAATGCAAAACAGA+AGG | + | chr5.1:13804373-13804392 | None:intergenic | 35.0% | |
CAATGATAACAGAAATTGCG+AGG | + | chr5.1:13804326-13804345 | None:intergenic | 35.0% | |
CTCGCAATTTCTGTTATCAT+TGG | - | chr5.1:13804324-13804343 | MS.gene64813:CDS | 35.0% | |
CTGATTATTGGTATGTTTCC+AGG | - | chr5.1:13805608-13805627 | MS.gene64813:CDS | 35.0% | |
GAACACTTTGTTCATGTCAT+GGG | + | chr5.1:13805553-13805572 | None:intergenic | 35.0% | |
TGAAACATGTGATGACAATG+AGG | + | chr5.1:13805666-13805685 | None:intergenic | 35.0% | |
TTGAATCATCCCTTGTTCTT+TGG | - | chr5.1:13804937-13804956 | MS.gene64813:intron | 35.0% | |
! | CAAGAGATCTTTTCTTGTGT+TGG | - | chr5.1:13805017-13805036 | MS.gene64813:CDS | 35.0% |
! | CATTCTGATGAATCTGGAAT+TGG | - | chr5.1:13804960-13804979 | MS.gene64813:intron | 35.0% |
! | CTTCTTTGTTCGGTTCTTTT+GGG | - | chr5.1:13804268-13804287 | MS.gene64813:CDS | 35.0% |
! | GCATAGATATGTGGCTTTTA+AGG | - | chr5.1:13805694-13805713 | MS.gene64813:CDS | 35.0% |
! | TCTTCTTTGTTCGGTTCTTT+TGG | - | chr5.1:13804267-13804286 | MS.gene64813:CDS | 35.0% |
! | TTGACCTTCTGTTTTGCATT+AGG | - | chr5.1:13804366-13804385 | MS.gene64813:intron | 35.0% |
!! | GATCTTTGAAACCGAATCTA+CGG | + | chr5.1:13805414-13805433 | None:intergenic | 35.0% |
!! | GTTATTGTTAGCTTGTTGAG+TGG | - | chr5.1:13805165-13805184 | MS.gene64813:intron | 35.0% |
!!! | GTGTTGTTTTGGGTTTTTTG+GGG | - | chr5.1:13804437-13804456 | MS.gene64813:intron | 35.0% |
!!! | TGTTGTTTTGGGTTTTTTGG+GGG | - | chr5.1:13804438-13804457 | MS.gene64813:intron | 35.0% |
AAAGAAGAACGAGAAGGACA+TGG | + | chr5.1:13804255-13804274 | None:intergenic | 40.0% | |
AATCACTGCTGACAATATGG+AGG | - | chr5.1:13805445-13805464 | MS.gene64813:intron | 40.0% | |
ACAGATCCCTTCTGCATAAT+GGG | + | chr5.1:13805731-13805750 | None:intergenic | 40.0% | |
ACATTATTGGGTGCTTTGAC+AGG | - | chr5.1:13804825-13804844 | MS.gene64813:intron | 40.0% | |
CAAAGGGTTATCCGTAGATT+CGG | - | chr5.1:13805400-13805419 | MS.gene64813:intron | 40.0% | |
CATCAGAATGCCAAAGAACA+AGG | + | chr5.1:13804950-13804969 | None:intergenic | 40.0% | |
CCTTCTCGTTCTTCTTTGTT+CGG | - | chr5.1:13804258-13804277 | MS.gene64813:CDS | 40.0% | |
CTTTGGCATTCTGATGAATC+TGG | - | chr5.1:13804954-13804973 | MS.gene64813:intron | 40.0% | |
TACAGATCCCTTCTGCATAA+TGG | + | chr5.1:13805732-13805751 | None:intergenic | 40.0% | |
TGTTTCCAGGACTTTCAACT+TGG | - | chr5.1:13805621-13805640 | MS.gene64813:CDS | 40.0% | |
TTCTTGCCCATTATGCAGAA+GGG | - | chr5.1:13805722-13805741 | MS.gene64813:CDS | 40.0% | |
TTCTTGTTCAGTTTGTCTCC+AGG | - | chr5.1:13805484-13805503 | MS.gene64813:intron | 40.0% | |
! | TGTTGAAACAAGCTTTGACG+AGG | - | chr5.1:13805349-13805368 | MS.gene64813:intron | 40.0% |
! | TTGACATTGGTGGTTCCAAA+GGG | - | chr5.1:13805384-13805403 | MS.gene64813:intron | 40.0% |
! | TTTGACATTGGTGGTTCCAA+AGG | - | chr5.1:13805383-13805402 | MS.gene64813:intron | 40.0% |
!!! | GATATGTGGCTTTTAAGGCA+TGG | - | chr5.1:13805699-13805718 | MS.gene64813:CDS | 40.0% |
ACCTCGAATGAAACCGCTTT+CGG | + | chr5.1:13804871-13804890 | None:intergenic | 45.0% | |
AGCTCCTGATATAGCACCAA+CGG | + | chr5.1:13804898-13804917 | None:intergenic | 45.0% | |
CCGAACAAAGAAGAACGAGA+AGG | + | chr5.1:13804261-13804280 | None:intergenic | 45.0% | |
CGAATCTACGGATAACCCTT+TGG | + | chr5.1:13805402-13805421 | None:intergenic | 45.0% | |
GAACGAGAAGGACATGGATT+TGG | + | chr5.1:13804249-13804268 | None:intergenic | 45.0% | |
GTTCTTGCCCATTATGCAGA+AGG | - | chr5.1:13805721-13805740 | MS.gene64813:CDS | 45.0% | |
TGAACAGCACTCAACATTGC+AGG | + | chr5.1:13805216-13805235 | None:intergenic | 45.0% | |
TGTTCAGTTTGTCTCCAGGT+TGG | - | chr5.1:13805488-13805507 | MS.gene64813:intron | 45.0% | |
! | GCTTTGACAGGAGCTTTGAT+AGG | - | chr5.1:13804837-13804856 | MS.gene64813:intron | 45.0% |
! | GTTGAGTGCTGTTCAAAGTC+AGG | - | chr5.1:13805221-13805240 | MS.gene64813:intron | 45.0% |
! | TCTCTCCAAGTTGAAAGTCC+TGG | + | chr5.1:13805629-13805648 | None:intergenic | 45.0% |
!! | CTGACAATATGGAGGCATCA+GGG | - | chr5.1:13805453-13805472 | MS.gene64813:intron | 45.0% |
!! | TGACAATATGGAGGCATCAG+GGG | - | chr5.1:13805454-13805473 | MS.gene64813:intron | 45.0% |
ACCGAAAGCGGTTTCATTCG+AGG | - | chr5.1:13804867-13804886 | MS.gene64813:intron | 50.0% | |
AGACTTGTGCGTGAGAGGAT+AGG | - | chr5.1:13805189-13805208 | MS.gene64813:intron | 50.0% | |
ATAGGTCAGGAGACCGAAAG+CGG | - | chr5.1:13804855-13804874 | MS.gene64813:intron | 50.0% | |
! | GACAGGAGCTTTGATAGGTC+AGG | - | chr5.1:13804842-13804861 | MS.gene64813:intron | 50.0% |
!! | GCTGACAATATGGAGGCATC+AGG | - | chr5.1:13805452-13805471 | MS.gene64813:intron | 50.0% |
!! | GCTGCCGTTGGTGCTATATC+AGG | - | chr5.1:13804891-13804910 | MS.gene64813:intron | 55.0% |
!! | TTCATTCGAGGTGCTGCCGT+TGG | - | chr5.1:13804879-13804898 | MS.gene64813:intron | 55.0% |
GTGGGAGACTTGTGCGTGAG+AGG | - | chr5.1:13805184-13805203 | MS.gene64813:intron | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.1 | gene | 13804234 | 13805752 | 13804234 | ID=MS.gene64813 |
chr5.1 | mRNA | 13804234 | 13805752 | 13804234 | ID=MS.gene64813.t1;Parent=MS.gene64813 |
chr5.1 | exon | 13805599 | 13805752 | 13805599 | ID=MS.gene64813.t1.exon1;Parent=MS.gene64813.t1 |
chr5.1 | CDS | 13805599 | 13805752 | 13805599 | ID=cds.MS.gene64813.t1;Parent=MS.gene64813.t1 |
chr5.1 | exon | 13804988 | 13805166 | 13804988 | ID=MS.gene64813.t1.exon2;Parent=MS.gene64813.t1 |
chr5.1 | CDS | 13804988 | 13805166 | 13804988 | ID=cds.MS.gene64813.t1;Parent=MS.gene64813.t1 |
chr5.1 | exon | 13804744 | 13804827 | 13804744 | ID=MS.gene64813.t1.exon3;Parent=MS.gene64813.t1 |
chr5.1 | CDS | 13804744 | 13804827 | 13804744 | ID=cds.MS.gene64813.t1;Parent=MS.gene64813.t1 |
chr5.1 | exon | 13804481 | 13804645 | 13804481 | ID=MS.gene64813.t1.exon4;Parent=MS.gene64813.t1 |
chr5.1 | CDS | 13804481 | 13804645 | 13804481 | ID=cds.MS.gene64813.t1;Parent=MS.gene64813.t1 |
chr5.1 | exon | 13804234 | 13804356 | 13804234 | ID=MS.gene64813.t1.exon5;Parent=MS.gene64813.t1 |
chr5.1 | CDS | 13804234 | 13804356 | 13804234 | ID=cds.MS.gene64813.t1;Parent=MS.gene64813.t1 |
Gene Sequence |
Protein sequence |