Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65159.t1 | XP_003623028.1 | 63.4 | 565 | 131 | 6 | 1 | 562 | 1 | 492 | 4.40E-166 | 594.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65159.t1 | P0C897 | 26.4 | 174 | 123 | 4 | 381 | 552 | 344 | 514 | 4.9e-09 | 64.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65159.t1 | G7L3E0 | 63.4 | 565 | 131 | 6 | 1 | 562 | 1 | 492 | 3.1e-166 | 594.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050807 | MS.gene65159 | 0.801682 | 8.02E-49 | -1.69E-46 |
| MS.gene051789 | MS.gene65159 | 0.814467 | 1.52E-51 | -1.69E-46 |
| MS.gene058168 | MS.gene65159 | 0.806421 | 8.29E-50 | -1.69E-46 |
| MS.gene059006 | MS.gene65159 | 0.810781 | 9.72E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65159.t1 | MTR_7g060310 | 63.363 | 565 | 131 | 7 | 1 | 562 | 1 | 492 | 0.0 | 666 |
| MS.gene65159.t1 | MTR_7g060220 | 62.278 | 562 | 91 | 11 | 1 | 562 | 1 | 441 | 0.0 | 603 |
| MS.gene65159.t1 | MTR_7g059810 | 61.989 | 563 | 99 | 13 | 1 | 562 | 1 | 449 | 0.0 | 599 |
| MS.gene65159.t1 | MTR_7g446270 | 59.319 | 558 | 143 | 8 | 2 | 553 | 1 | 480 | 0.0 | 588 |
| MS.gene65159.t1 | MTR_7g060370 | 57.394 | 568 | 140 | 8 | 2 | 561 | 1 | 474 | 0.0 | 576 |
| MS.gene65159.t1 | MTR_0182s0060 | 54.262 | 610 | 142 | 11 | 1 | 562 | 1 | 521 | 0.0 | 571 |
| MS.gene65159.t1 | MTR_7g060115 | 53.805 | 565 | 144 | 11 | 2 | 562 | 1 | 452 | 0.0 | 548 |
| MS.gene65159.t1 | MTR_7g059540 | 53.805 | 565 | 170 | 10 | 2 | 561 | 1 | 479 | 0.0 | 531 |
| MS.gene65159.t1 | MTR_7g059540 | 52.566 | 565 | 169 | 8 | 1 | 561 | 1 | 470 | 0.0 | 530 |
| MS.gene65159.t1 | MTR_7g059510 | 52.043 | 563 | 125 | 9 | 2 | 561 | 1 | 421 | 1.17e-179 | 513 |
| MS.gene65159.t1 | MTR_7g060330 | 52.308 | 585 | 163 | 10 | 1 | 562 | 1 | 492 | 1.22e-177 | 511 |
| MS.gene65159.t1 | MTR_7g060020 | 81.250 | 224 | 42 | 0 | 2 | 225 | 1 | 224 | 5.51e-126 | 377 |
| MS.gene65159.t1 | MTR_7g060020 | 53.386 | 251 | 80 | 4 | 313 | 562 | 218 | 432 | 2.42e-78 | 253 |
| MS.gene65159.t1 | MTR_7g060320 | 71.200 | 250 | 58 | 6 | 1 | 248 | 1 | 238 | 8.44e-113 | 344 |
| MS.gene65159.t1 | MTR_7g060320 | 61.131 | 283 | 91 | 5 | 286 | 561 | 198 | 468 | 3.25e-99 | 309 |
| MS.gene65159.t1 | MTR_7g059480 | 59.434 | 318 | 107 | 4 | 267 | 562 | 461 | 778 | 4.01e-108 | 341 |
| MS.gene65159.t1 | MTR_7g059480 | 57.632 | 321 | 120 | 9 | 2 | 317 | 1 | 310 | 1.91e-89 | 292 |
| MS.gene65159.t1 | MTR_7g059525 | 59.498 | 279 | 106 | 6 | 290 | 562 | 11 | 288 | 1.74e-103 | 313 |
| MS.gene65159.t1 | MTR_7g060840 | 77.723 | 202 | 39 | 2 | 2 | 200 | 1 | 199 | 2.75e-101 | 313 |
| MS.gene65159.t1 | MTR_7g060840 | 51.953 | 256 | 89 | 3 | 309 | 562 | 214 | 437 | 1.79e-82 | 265 |
| MS.gene65159.t1 | MTR_7g060260 | 67.672 | 232 | 65 | 3 | 1 | 232 | 1 | 222 | 4.72e-98 | 305 |
| MS.gene65159.t1 | MTR_7g060260 | 62.304 | 191 | 71 | 1 | 373 | 562 | 241 | 431 | 1.83e-71 | 235 |
| MS.gene65159.t1 | MTR_7g059515 | 77.895 | 190 | 35 | 3 | 2 | 191 | 1 | 183 | 1.55e-96 | 293 |
| MS.gene65159.t1 | MTR_7g060060 | 57.193 | 285 | 50 | 4 | 54 | 338 | 1 | 213 | 7.10e-93 | 283 |
| MS.gene65159.t1 | MTR_7g059475 | 78.857 | 175 | 34 | 3 | 75 | 248 | 1 | 173 | 4.72e-91 | 280 |
| MS.gene65159.t1 | MTR_7g060160 | 53.488 | 258 | 88 | 5 | 307 | 562 | 177 | 404 | 1.73e-83 | 266 |
| MS.gene65159.t1 | MTR_7g060160 | 60.829 | 217 | 60 | 3 | 2 | 218 | 1 | 192 | 4.34e-76 | 247 |
| MS.gene65159.t1 | MTR_7g060080 | 62.564 | 195 | 72 | 1 | 369 | 562 | 2 | 196 | 4.42e-81 | 252 |
| MS.gene65159.t1 | MTR_7g059520 | 57.377 | 183 | 69 | 2 | 381 | 562 | 3 | 177 | 2.42e-69 | 221 |
| MS.gene65159.t1 | MTR_8g042170 | 38.281 | 256 | 134 | 5 | 320 | 559 | 212 | 459 | 1.63e-48 | 175 |
| MS.gene65159.t1 | MTR_8g042170 | 44.382 | 178 | 80 | 5 | 14 | 183 | 10 | 176 | 1.26e-37 | 145 |
| MS.gene65159.t1 | MTR_8g042400 | 35.401 | 274 | 144 | 5 | 303 | 559 | 89 | 346 | 4.82e-47 | 168 |
| MS.gene65159.t1 | MTR_8g042400 | 44.595 | 74 | 39 | 1 | 113 | 186 | 2 | 73 | 1.97e-11 | 66.2 |
| MS.gene65159.t1 | MTR_8g037923 | 36.719 | 256 | 146 | 3 | 320 | 559 | 217 | 472 | 7.94e-46 | 168 |
| MS.gene65159.t1 | MTR_8g037923 | 45.783 | 166 | 73 | 4 | 26 | 183 | 25 | 181 | 4.70e-38 | 146 |
| MS.gene65159.t1 | MTR_7g060200 | 74.757 | 103 | 24 | 1 | 75 | 177 | 1 | 101 | 1.72e-44 | 157 |
| MS.gene65159.t1 | MTR_7g060200 | 65.217 | 46 | 14 | 1 | 516 | 561 | 156 | 199 | 2.71e-12 | 66.6 |
| MS.gene65159.t1 | MTR_1g048070 | 49.500 | 200 | 75 | 6 | 2 | 201 | 1 | 174 | 8.42e-44 | 156 |
| MS.gene65159.t1 | MTR_8g042070 | 36.187 | 257 | 147 | 5 | 320 | 560 | 11 | 266 | 5.58e-41 | 149 |
| MS.gene65159.t1 | MTR_8g037920 | 35.659 | 258 | 130 | 6 | 320 | 559 | 172 | 411 | 3.01e-40 | 151 |
| MS.gene65159.t1 | MTR_8g037920 | 43.885 | 139 | 61 | 4 | 53 | 183 | 7 | 136 | 7.80e-27 | 113 |
| MS.gene65159.t1 | MTR_8g042080 | 44.444 | 171 | 76 | 5 | 14 | 176 | 10 | 169 | 5.56e-37 | 135 |
| MS.gene65159.t1 | MTR_5g016570 | 37.079 | 178 | 102 | 6 | 385 | 558 | 356 | 527 | 2.78e-22 | 100 |
| MS.gene65159.t1 | MTR_5g086260 | 32.203 | 177 | 114 | 3 | 383 | 557 | 136 | 308 | 5.80e-19 | 88.6 |
| MS.gene65159.t1 | MTR_5g087580 | 30.102 | 196 | 130 | 4 | 365 | 558 | 25 | 215 | 1.09e-17 | 82.8 |
| MS.gene65159.t1 | MTR_5g086340 | 32.203 | 177 | 113 | 4 | 383 | 557 | 261 | 432 | 1.13e-17 | 86.3 |
| MS.gene65159.t1 | MTR_8g042090 | 42.000 | 100 | 44 | 2 | 434 | 519 | 9 | 108 | 1.26e-17 | 79.0 |
| MS.gene65159.t1 | MTR_8g005325 | 30.435 | 184 | 110 | 4 | 383 | 549 | 280 | 462 | 1.12e-13 | 73.9 |
| MS.gene65159.t1 | MTR_7g060105 | 66.038 | 53 | 17 | 1 | 457 | 508 | 1 | 53 | 1.20e-13 | 69.7 |
| MS.gene65159.t1 | MTR_8g005295 | 36.879 | 141 | 80 | 4 | 413 | 546 | 364 | 502 | 3.57e-12 | 69.3 |
| MS.gene65159.t1 | MTR_8g005235 | 30.435 | 138 | 94 | 2 | 413 | 549 | 296 | 432 | 5.09e-12 | 68.6 |
| MS.gene65159.t1 | MTR_8g005225 | 31.333 | 150 | 96 | 4 | 415 | 559 | 314 | 461 | 7.70e-12 | 68.2 |
| MS.gene65159.t1 | MTR_8g005285 | 35.461 | 141 | 82 | 4 | 413 | 546 | 350 | 488 | 2.84e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65159.t1 | AT3G50120 | 32.836 | 201 | 122 | 6 | 369 | 562 | 334 | 528 | 2.25e-23 | 104 |
| MS.gene65159.t1 | AT3G50180 | 29.183 | 257 | 136 | 8 | 312 | 558 | 361 | 581 | 2.10e-20 | 95.5 |
| MS.gene65159.t1 | AT3G50140 | 29.603 | 277 | 165 | 9 | 290 | 562 | 286 | 536 | 1.26e-19 | 92.8 |
| MS.gene65159.t1 | AT3G50150 | 32.967 | 182 | 112 | 5 | 385 | 562 | 331 | 506 | 1.31e-19 | 92.4 |
| MS.gene65159.t1 | AT3G50160 | 32.597 | 181 | 114 | 5 | 385 | 562 | 323 | 498 | 2.28e-19 | 91.7 |
| MS.gene65159.t1 | AT3G50130 | 34.637 | 179 | 107 | 5 | 385 | 559 | 386 | 558 | 7.18e-18 | 87.4 |
| MS.gene65159.t1 | AT3G50170 | 28.571 | 245 | 145 | 7 | 322 | 562 | 318 | 536 | 9.93e-18 | 87.0 |
| MS.gene65159.t1 | AT3G50190 | 27.240 | 279 | 163 | 9 | 290 | 558 | 238 | 486 | 2.64e-16 | 82.4 |
| MS.gene65159.t1 | AT4G31980 | 29.310 | 174 | 114 | 5 | 387 | 557 | 510 | 677 | 2.95e-12 | 70.1 |
| MS.gene65159.t1 | AT5G22540 | 31.707 | 164 | 87 | 6 | 32 | 185 | 33 | 181 | 1.08e-11 | 67.4 |
| MS.gene65159.t1 | AT3G47210 | 30.380 | 158 | 92 | 4 | 32 | 184 | 95 | 239 | 1.57e-11 | 67.0 |
| MS.gene65159.t1 | AT5G11290 | 28.161 | 174 | 117 | 4 | 386 | 557 | 252 | 419 | 4.16e-11 | 65.5 |
| MS.gene65159.t1 | AT2G36430 | 28.743 | 167 | 100 | 4 | 32 | 191 | 47 | 201 | 4.41e-11 | 65.9 |
Find 123 sgRNAs with CRISPR-Local
Find 147 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTGACCGTTATTGCATTCT+TGG | 0.155555 | 7.1:-41732804 | MS.gene65159:CDS |
| TTCTCTAACTGTGACTTATT+TGG | 0.205562 | 7.1:+41733782 | None:intergenic |
| ATCTTTGGTCGTGAAATTTC+GGG | 0.249747 | 7.1:+41734580 | None:intergenic |
| TATCTTTGGTCGTGAAATTT+CGG | 0.252415 | 7.1:+41734579 | None:intergenic |
| TGTGGCACTCTTTGTATCTT+TGG | 0.253651 | 7.1:+41734565 | None:intergenic |
| CTCAATGCCTTCACATCTTC+AGG | 0.289861 | 7.1:+41733013 | None:intergenic |
| CTCCGGTTCCTCTTATTATC+TGG | 0.290523 | 7.1:+41734031 | None:intergenic |
| CTGTTCTTATGTAGCTTTCA+TGG | 0.300312 | 7.1:-41733053 | MS.gene65159:CDS |
| AGACTTAAGGCAAGCGCAAC+AGG | 0.311102 | 7.1:-41733223 | MS.gene65159:CDS |
| TTTCGTTCAGTCATGGTTTA+CGG | 0.332686 | 7.1:-41732756 | MS.gene65159:CDS |
| CCATAGTTGTTGTCAAAATC+TGG | 0.352585 | 7.1:+41733079 | None:intergenic |
| TTTCCTCGAAGGTCAACATT+TGG | 0.355874 | 7.1:-41734059 | MS.gene65159:CDS |
| AGGTTGTTCACATAGATTAC+AGG | 0.359847 | 7.1:+41733145 | None:intergenic |
| TTCTCTGACTGTGACTCATT+TGG | 0.360074 | 7.1:+41733842 | None:intergenic |
| TAGATCCTTCCGAATTCTTC+CGG | 0.383941 | 7.1:+41734402 | None:intergenic |
| GACACATCTCATATGCTATC+AGG | 0.391502 | 7.1:+41733101 | None:intergenic |
| GTGAAGGCATTGAGATCAAA+AGG | 0.399358 | 7.1:-41733004 | MS.gene65159:CDS |
| AAAGCCTTCAAGAGAGTTGC+CGG | 0.408074 | 7.1:+41734312 | None:intergenic |
| CTTGATTGTGTCGCCGCCTC+CGG | 0.408344 | 7.1:+41734014 | None:intergenic |
| ATGTTCTTTGCTGCATATCT+TGG | 0.408587 | 7.1:-41734245 | MS.gene65159:CDS |
| GAATATCAAGGTTGATCAAC+TGG | 0.414013 | 7.1:-41734191 | MS.gene65159:CDS |
| GGCAACTCTCTTGAAGGCTT+TGG | 0.415635 | 7.1:-41734310 | MS.gene65159:CDS |
| TTCACCCGGCTAGCAAATAA+AGG | 0.429992 | 7.1:-41732733 | None:intergenic |
| GGTCGTGAAATTTCGGGTGT+TGG | 0.431707 | 7.1:+41734586 | None:intergenic |
| CTCTTACTTTCGTTCAGTCA+TGG | 0.443393 | 7.1:-41732763 | MS.gene65159:CDS |
| TTAACCGGCAACTCTCTTGA+AGG | 0.444867 | 7.1:-41734316 | MS.gene65159:CDS |
| TCGTGGATGTTGTTCGTGGA+TGG | 0.456654 | 7.1:-41734268 | MS.gene65159:CDS |
| CAGAAATAGAACAAAATTTG+AGG | 0.456898 | 7.1:-41734536 | MS.gene65159:CDS |
| GTCAGAAGGAGAATGAGTTC+AGG | 0.459459 | 7.1:-41733291 | MS.gene65159:CDS |
| TTAGATCTGTATTGCCATGA+TGG | 0.461287 | 7.1:+41734476 | None:intergenic |
| CACCAGATAATAAGAGGAAC+CGG | 0.465256 | 7.1:-41734033 | MS.gene65159:CDS |
| TCTTGTATTTATTAAAGTAA+TGG | 0.471403 | 7.1:+41732867 | None:intergenic |
| CAATATCATAGGTACTGACT+TGG | 0.472552 | 7.1:-41732936 | MS.gene65159:CDS |
| ATTGTATTGTACCTTGGACT+TGG | 0.474271 | 7.1:+41733649 | None:intergenic |
| GTCTCTGAATGTGACTCATT+TGG | 0.475520 | 7.1:+41733719 | None:intergenic |
| GATGATGGATGTGCTATTGT+TGG | 0.475820 | 7.1:-41734161 | MS.gene65159:CDS |
| TCAACTGGTTCTTGTGATGA+TGG | 0.477187 | 7.1:-41734176 | MS.gene65159:CDS |
| AGCAGTAGGAATAAGACTTA+AGG | 0.477487 | 7.1:-41733236 | MS.gene65159:CDS |
| AGAACAACATAGTACTGTAT+TGG | 0.480302 | 7.1:-41733957 | MS.gene65159:CDS |
| GGCAATACAGATCTAAAGTT+GGG | 0.480771 | 7.1:-41734469 | MS.gene65159:CDS |
| GACATGGTTTCAAAAGGAAA+AGG | 0.483420 | 7.1:-41733896 | MS.gene65159:CDS |
| TGGAAACACCAGATAATAAG+AGG | 0.484008 | 7.1:-41734039 | MS.gene65159:CDS |
| AGTTCAGGCCGACTACATAC+AGG | 0.486436 | 7.1:-41733276 | MS.gene65159:CDS |
| AGGACCTATTGACACCAACT+TGG | 0.488609 | 7.1:+41734501 | None:intergenic |
| ATGTCCTTCTCCTTCTCTGA+TGG | 0.490443 | 7.1:+41733914 | None:intergenic |
| GAGAAGGACATGGTTTCAAA+AGG | 0.491074 | 7.1:-41733902 | MS.gene65159:CDS |
| ACCACCTTTATTTGCTAGCC+GGG | 0.492856 | 7.1:+41732729 | None:intergenic |
| AACTTCCTCATCACTCCAAA+CGG | 0.493448 | 7.1:+41732970 | None:intergenic |
| GACTGTGACTCATTTGGTAA+TGG | 0.495269 | 7.1:+41733848 | None:intergenic |
| ACAGTTAGAGAAGGAGGAAG+AGG | 0.499594 | 7.1:-41733771 | MS.gene65159:CDS |
| TTCTTCAAATAACAGCGAAA+TGG | 0.502731 | 7.1:-41733315 | MS.gene65159:CDS |
| TTTCCAAATGTTGACCTTCG+AGG | 0.505709 | 7.1:+41734056 | None:intergenic |
| AACCACCTTTATTTGCTAGC+CGG | 0.507244 | 7.1:+41732728 | None:intergenic |
| ACATAGTACTGTATTGGTTA+CGG | 0.507661 | 7.1:-41733951 | MS.gene65159:CDS |
| AAGGAGGAAGAGGAAGGAGA+AGG | 0.508367 | 7.1:-41733761 | MS.gene65159:CDS |
| AATATAGTTCCAGACAGAAA+AGG | 0.510095 | 7.1:-41733983 | MS.gene65159:CDS |
| TTAGAGAAGGAGGAAGAGGA+AGG | 0.510191 | 7.1:-41733767 | MS.gene65159:CDS |
| GAGAGAAGTACAAGCTTATG+TGG | 0.511159 | 7.1:-41734447 | MS.gene65159:CDS |
| AAAGCGAAGCTTGATGAACC+AGG | 0.511364 | 7.1:-41734220 | MS.gene65159:CDS |
| GAGAAGGACGATGAATTAGA+AGG | 0.516673 | 7.1:-41733824 | MS.gene65159:CDS |
| ATACAAGACTTGGATAGCGC+TGG | 0.517586 | 7.1:-41732852 | MS.gene65159:CDS |
| TGCAACCAAGAATGCAATAA+CGG | 0.518567 | 7.1:+41732799 | None:intergenic |
| ACCTTGATATTCATGTGCCC+TGG | 0.519902 | 7.1:+41734202 | None:intergenic |
| ACCTATGATATTGAAAAGAC+TGG | 0.521468 | 7.1:+41732946 | None:intergenic |
| TGGCAATACAGATCTAAAGT+TGG | 0.521509 | 7.1:-41734470 | MS.gene65159:CDS |
| GGACCTATTGACACCAACTT+GGG | 0.521712 | 7.1:+41734502 | None:intergenic |
| GTCATGGTTTACGGTTCACC+CGG | 0.525596 | 7.1:-41732747 | MS.gene65159:CDS |
| ACTTTAATAAATACAAGACT+TGG | 0.526728 | 7.1:-41732862 | MS.gene65159:CDS |
| TCTGTATTGCCATGATGGAT+AGG | 0.535705 | 7.1:+41734481 | None:intergenic |
| TACAAGACTTGGATAGCGCT+GGG | 0.535966 | 7.1:-41732851 | MS.gene65159:CDS |
| ATAGAAGATCTAAGAGCAGT+AGG | 0.542239 | 7.1:-41733250 | MS.gene65159:CDS |
| ATAATAAGAGGAACCGGAGG+CGG | 0.543057 | 7.1:-41734027 | MS.gene65159:CDS |
| AAAATATTGTGGAGCTACAA+AGG | 0.545790 | 7.1:-41734624 | MS.gene65159:CDS |
| ACGTGGTACTCAAGCTATTG+TGG | 0.547562 | 7.1:-41734123 | MS.gene65159:CDS |
| GTTCTATTTCTGAGATACTG+TGG | 0.549721 | 7.1:+41734547 | None:intergenic |
| TAAGTCACAGTTAGAGAAGG+AGG | 0.552229 | 7.1:-41733777 | MS.gene65159:CDS |
| TCAGAGAAATCTACGTCTGT+TGG | 0.555130 | 7.1:+41733196 | None:intergenic |
| ACGTAGATTTCTCTGAAGGA+TGG | 0.555132 | 7.1:-41733189 | MS.gene65159:CDS |
| TGAGTAAAGTAGAGGCTGCA+AGG | 0.563345 | 7.1:+41733125 | None:intergenic |
| TCAATAGGTCCTATCCATCA+TGG | 0.569865 | 7.1:-41734490 | MS.gene65159:CDS |
| GTCGGAGACACCATCAGAGA+AGG | 0.570255 | 7.1:-41733924 | MS.gene65159:CDS |
| CGACCATCCTGAAGATGTGA+AGG | 0.581217 | 7.1:-41733020 | MS.gene65159:CDS |
| TCTATGCCCCTGTATGTAGT+CGG | 0.589958 | 7.1:+41733268 | None:intergenic |
| TACCCTTCAAGAAAATATTG+TGG | 0.590630 | 7.1:-41734635 | MS.gene65159:CDS |
| GTTGTCGTGGATGTTGTTCG+TGG | 0.591132 | 7.1:-41734272 | MS.gene65159:CDS |
| TGATAACATTGATGAACTGA+AGG | 0.591317 | 7.1:-41734365 | MS.gene65159:CDS |
| GTTCAGGCCGACTACATACA+GGG | 0.591518 | 7.1:-41733275 | MS.gene65159:CDS |
| GTTTCAAAAGGAAAAGGAGA+AGG | 0.598414 | 7.1:-41733890 | MS.gene65159:CDS |
| ACCATGGAAAATTTCCTCGA+AGG | 0.600809 | 7.1:-41734070 | MS.gene65159:CDS |
| ACTGAACGAAAGTAAGAGCA+AGG | 0.602293 | 7.1:+41732768 | None:intergenic |
| AAATAAGTCACAGTTAGAGA+AGG | 0.602534 | 7.1:-41733780 | MS.gene65159:CDS |
| ACAGACGTAGATTTCTCTGA+AGG | 0.607531 | 7.1:-41733193 | MS.gene65159:CDS |
| ACCAGGGCACATGAATATCA+AGG | 0.609178 | 7.1:-41734203 | MS.gene65159:CDS |
| AATGGTCACGTAATTGCACT+TGG | 0.615368 | 7.1:+41732885 | None:intergenic |
| TGAAGGCATTGAGATCAAAA+GGG | 0.616701 | 7.1:-41733003 | MS.gene65159:CDS |
| GACCTATTGACACCAACTTG+GGG | 0.616855 | 7.1:+41734503 | None:intergenic |
| GACACCATCAGAGAAGGAGA+AGG | 0.623322 | 7.1:-41733918 | MS.gene65159:CDS |
| GAGTGAATTGATAATGACCA+TGG | 0.623928 | 7.1:-41734086 | MS.gene65159:CDS |
| ATGCCTTCACATCTTCAGGA+TGG | 0.624064 | 7.1:+41733017 | None:intergenic |
| AAATGAGTCACAGTCAGAGA+AGG | 0.625151 | 7.1:-41733840 | MS.gene65159:CDS |
| GACTTAAGGCAAGCGCAACA+GGG | 0.625198 | 7.1:-41733222 | MS.gene65159:CDS |
| AAGAATGCAATAACGGTCAG+AGG | 0.626409 | 7.1:+41732806 | None:intergenic |
| AACAGCGAAATGGAGTCAGA+AGG | 0.627668 | 7.1:-41733305 | MS.gene65159:CDS |
| AATAGCTTGAGTACCACGTA+AGG | 0.631083 | 7.1:+41734127 | None:intergenic |
| GCCTTGAAGAAAAGTTGTCG+TGG | 0.631104 | 7.1:-41734285 | MS.gene65159:CDS |
| AAACACCGGAAGAATTCGGA+AGG | 0.639383 | 7.1:-41734407 | MS.gene65159:CDS |
| CCTCACTACATCCAAGTCCA+AGG | 0.640385 | 7.1:-41733660 | MS.gene65159:intron |
| AACGAAAGTAAGAGCAAGGG+CGG | 0.645777 | 7.1:+41732772 | None:intergenic |
| TATCAGGTTGAGTAAAGTAG+AGG | 0.648563 | 7.1:+41733117 | None:intergenic |
| AGAGAAGTACAAGCTTATGT+GGG | 0.649358 | 7.1:-41734446 | MS.gene65159:CDS |
| TTAAGATCTAGAAGATGAGT+CGG | 0.652064 | 7.1:+41733695 | None:intergenic |
| ACCTATTGACACCAACTTGG+GGG | 0.654484 | 7.1:+41734504 | None:intergenic |
| GGAGAATCAACTTCCTTACG+TGG | 0.660728 | 7.1:-41734140 | MS.gene65159:CDS |
| TGTATTGGTTACGGACGAGT+CGG | 0.662495 | 7.1:-41733942 | MS.gene65159:CDS |
| GTGCACCGTTTGGAGTGATG+AGG | 0.674174 | 7.1:-41732975 | MS.gene65159:CDS |
| ATCAGAGAAGGAGAAGGACA+TGG | 0.684143 | 7.1:-41733912 | MS.gene65159:CDS |
| GATAACATTGATGAACTGAA+GGG | 0.689841 | 7.1:-41734364 | MS.gene65159:CDS |
| AAGCGAAGCTTGATGAACCA+GGG | 0.690525 | 7.1:-41734219 | MS.gene65159:CDS |
| CTGAACGAAAGTAAGAGCAA+GGG | 0.692964 | 7.1:+41732769 | None:intergenic |
| CCTTGGACTTGGATGTAGTG+AGG | 0.703681 | 7.1:+41733660 | None:intergenic |
| CAGATAATAAGAGGAACCGG+AGG | 0.711871 | 7.1:-41734030 | MS.gene65159:CDS |
| TTCAGGCCGACTACATACAG+GGG | 0.730984 | 7.1:-41733274 | MS.gene65159:CDS |
| TTAAGGCAAGCGCAACAGGG+AGG | 0.756688 | 7.1:-41733219 | MS.gene65159:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TCTTGTATTTATTAAAGTAA+TGG | + | chr7.1:41734524-41734543 | None:intergenic | 15.0% |
| !! | TTCTTCAAAAAATAAAGATA+CGG | - | chr7.1:41734040-41734059 | MS.gene65159:CDS | 15.0% |
| !! | ACTTTAATAAATACAAGACT+TGG | - | chr7.1:41734526-41734545 | MS.gene65159:CDS | 20.0% |
| !! | AGTATTTGGTTACAAAATTA+AGG | - | chr7.1:41733818-41733837 | MS.gene65159:CDS | 20.0% |
| !! | TGATATTTATTATAGTACAG+AGG | - | chr7.1:41733905-41733924 | MS.gene65159:CDS | 20.0% |
| !!! | AATGATGTTTTAACTTTAAC+CGG | - | chr7.1:41733057-41733076 | MS.gene65159:CDS | 20.0% |
| !!! | ATAAATATCACATTTTGCAA+AGG | + | chr7.1:41733895-41733914 | None:intergenic | 20.0% |
| !!! | ATTAGAGACAAAAAAGTATT+TGG | - | chr7.1:41733804-41733823 | MS.gene65159:CDS | 20.0% |
| !!! | CTATATGTTTTAATCAGAAA+TGG | + | chr7.1:41733980-41733999 | None:intergenic | 20.0% |
| ! | ATTAAGGACAGAATTAGAAA+CGG | - | chr7.1:41733834-41733853 | MS.gene65159:CDS | 25.0% |
| ! | CAGAAATAGAACAAAATTTG+AGG | - | chr7.1:41732852-41732871 | MS.gene65159:CDS | 25.0% |
| ! | TTGTTAATTGTATTGTACCT+TGG | + | chr7.1:41733748-41733767 | None:intergenic | 25.0% |
| !!! | TGTTTTAATCAGAAATGGAA+TGG | + | chr7.1:41733975-41733994 | None:intergenic | 25.0% |
| AAAATATTGTGGAGCTACAA+AGG | - | chr7.1:41732764-41732783 | MS.gene65159:CDS | 30.0% | |
| AAATAAGTCACAGTTAGAGA+AGG | - | chr7.1:41733608-41733627 | MS.gene65159:intron | 30.0% | |
| AATATAGTTCCAGACAGAAA+AGG | - | chr7.1:41733405-41733424 | MS.gene65159:intron | 30.0% | |
| ACCTATGATATTGAAAAGAC+TGG | + | chr7.1:41734445-41734464 | None:intergenic | 30.0% | |
| AGAACAACATAGTACTGTAT+TGG | - | chr7.1:41733431-41733450 | MS.gene65159:intron | 30.0% | |
| GATAACATTGATGAACTGAA+GGG | - | chr7.1:41733024-41733043 | MS.gene65159:CDS | 30.0% | |
| GCAAAATACATCAAAAACAC+CGG | - | chr7.1:41732967-41732986 | MS.gene65159:CDS | 30.0% | |
| TACCCTTCAAGAAAATATTG+TGG | - | chr7.1:41732753-41732772 | MS.gene65159:CDS | 30.0% | |
| TATCTTTGGTCGTGAAATTT+CGG | + | chr7.1:41732812-41732831 | None:intergenic | 30.0% | |
| TGATAACATTGATGAACTGA+AGG | - | chr7.1:41733023-41733042 | MS.gene65159:CDS | 30.0% | |
| TTAAGATCTAGAAGATGAGT+CGG | + | chr7.1:41733696-41733715 | None:intergenic | 30.0% | |
| TTCTCTAACTGTGACTTATT+TGG | + | chr7.1:41733609-41733628 | None:intergenic | 30.0% | |
| TTCTTCAAATAACAGCGAAA+TGG | - | chr7.1:41734073-41734092 | MS.gene65159:CDS | 30.0% | |
| ! | ATTTTCTTGAAGGGTAGTTT+GGG | + | chr7.1:41732749-41732768 | None:intergenic | 30.0% |
| ! | CTCCACAATATTTTCTTGAA+GGG | + | chr7.1:41732758-41732777 | None:intergenic | 30.0% |
| ! | TATTTTCTTGAAGGGTAGTT+TGG | + | chr7.1:41732750-41732769 | None:intergenic | 30.0% |
| !! | ACATAGTACTGTATTGGTTA+CGG | - | chr7.1:41733437-41733456 | MS.gene65159:intron | 30.0% |
| !! | CAGATTTTGACAACAACTAT+GGG | - | chr7.1:41734310-41734329 | MS.gene65159:CDS | 30.0% |
| !!! | ACGGAGTAATTTGTCTTTTT+TGG | - | chr7.1:41733853-41733872 | MS.gene65159:CDS | 30.0% |
| AGCAGTAGGAATAAGACTTA+AGG | - | chr7.1:41734152-41734171 | MS.gene65159:CDS | 35.0% | |
| AGGTTGTTCACATAGATTAC+AGG | + | chr7.1:41734246-41734265 | None:intergenic | 35.0% | |
| ATAGAAGATCTAAGAGCAGT+AGG | - | chr7.1:41734138-41734157 | MS.gene65159:CDS | 35.0% | |
| ATCTTTGGTCGTGAAATTTC+GGG | + | chr7.1:41732811-41732830 | None:intergenic | 35.0% | |
| ATGTTCTTTGCTGCATATCT+TGG | - | chr7.1:41733143-41733162 | MS.gene65159:CDS | 35.0% | |
| ATTGTATTGTACCTTGGACT+TGG | + | chr7.1:41733742-41733761 | None:intergenic | 35.0% | |
| CCATAGTTGTTGTCAAAATC+TGG | + | chr7.1:41734312-41734331 | None:intergenic | 35.0% | |
| CTGTTCTTATGTAGCTTTCA+TGG | - | chr7.1:41734335-41734354 | MS.gene65159:CDS | 35.0% | |
| GACATGGTTTCAAAAGGAAA+AGG | - | chr7.1:41733492-41733511 | MS.gene65159:intron | 35.0% | |
| GTTTCAAAAGGAAAAGGAGA+AGG | - | chr7.1:41733498-41733517 | MS.gene65159:intron | 35.0% | |
| TCAAAAACACCGGAAGAATT+CGG | - | chr7.1:41732977-41732996 | MS.gene65159:CDS | 35.0% | |
| TGCAACCAAGAATGCAATAA+CGG | + | chr7.1:41734592-41734611 | None:intergenic | 35.0% | |
| TGGAAACACCAGATAATAAG+AGG | - | chr7.1:41733349-41733368 | MS.gene65159:CDS | 35.0% | |
| TTAGATCTGTATTGCCATGA+TGG | + | chr7.1:41732915-41732934 | None:intergenic | 35.0% | |
| TTTCGTTCAGTCATGGTTTA+CGG | - | chr7.1:41734632-41734651 | MS.gene65159:CDS | 35.0% | |
| ! | AGAGAAGTACAAGCTTATGT+GGG | - | chr7.1:41732942-41732961 | MS.gene65159:CDS | 35.0% |
| ! | ATGTAGTGAGGATCATTTTG+CGG | + | chr7.1:41733719-41733738 | None:intergenic | 35.0% |
| ! | GAATATCAAGGTTGATCAAC+TGG | - | chr7.1:41733197-41733216 | MS.gene65159:CDS | 35.0% |
| ! | GCCAGTCTTTTCAATATCAT+AGG | - | chr7.1:41734441-41734460 | MS.gene65159:CDS | 35.0% |
| ! | GCTCCACAATATTTTCTTGA+AGG | + | chr7.1:41732759-41732778 | None:intergenic | 35.0% |
| ! | GGCAATACAGATCTAAAGTT+GGG | - | chr7.1:41732919-41732938 | MS.gene65159:CDS | 35.0% |
| ! | TGGCAATACAGATCTAAAGT+TGG | - | chr7.1:41732918-41732937 | MS.gene65159:CDS | 35.0% |
| ! | TGTTCTTTTCCTTTTCTGTC+TGG | + | chr7.1:41733417-41733436 | None:intergenic | 35.0% |
| !! | CAATATCATAGGTACTGACT+TGG | - | chr7.1:41734452-41734471 | MS.gene65159:CDS | 35.0% |
| !! | CCAGATTTTGACAACAACTA+TGG | - | chr7.1:41734309-41734328 | MS.gene65159:CDS | 35.0% |
| !! | GAGTGAATTGATAATGACCA+TGG | - | chr7.1:41733302-41733321 | MS.gene65159:CDS | 35.0% |
| !! | GTTCTATTTCTGAGATACTG+TGG | + | chr7.1:41732844-41732863 | None:intergenic | 35.0% |
| !! | TATCAGGTTGAGTAAAGTAG+AGG | + | chr7.1:41734274-41734293 | None:intergenic | 35.0% |
| !! | TGAAGGCATTGAGATCAAAA+GGG | - | chr7.1:41734385-41734404 | MS.gene65159:CDS | 35.0% |
| AAATGAGTCACAGTCAGAGA+AGG | - | chr7.1:41733548-41733567 | MS.gene65159:intron | 40.0% | |
| AACTTCCTCATCACTCCAAA+CGG | + | chr7.1:41734421-41734440 | None:intergenic | 40.0% | |
| AAGAATGCAATAACGGTCAG+AGG | + | chr7.1:41734585-41734604 | None:intergenic | 40.0% | |
| AATAGCTTGAGTACCACGTA+AGG | + | chr7.1:41733264-41733283 | None:intergenic | 40.0% | |
| AATGGTCACGTAATTGCACT+TGG | + | chr7.1:41734506-41734525 | None:intergenic | 40.0% | |
| ACAGACGTAGATTTCTCTGA+AGG | - | chr7.1:41734195-41734214 | MS.gene65159:CDS | 40.0% | |
| ACCATGGAAAATTTCCTCGA+AGG | - | chr7.1:41733318-41733337 | MS.gene65159:CDS | 40.0% | |
| ACTGAACGAAAGTAAGAGCA+AGG | + | chr7.1:41734623-41734642 | None:intergenic | 40.0% | |
| CACCAGATAATAAGAGGAAC+CGG | - | chr7.1:41733355-41733374 | MS.gene65159:CDS | 40.0% | |
| CTCTTACTTTCGTTCAGTCA+TGG | - | chr7.1:41734625-41734644 | MS.gene65159:CDS | 40.0% | |
| CTGAACGAAAGTAAGAGCAA+GGG | + | chr7.1:41734622-41734641 | None:intergenic | 40.0% | |
| GACACATCTCATATGCTATC+AGG | + | chr7.1:41734290-41734309 | None:intergenic | 40.0% | |
| GACTGTGACTCATTTGGTAA+TGG | + | chr7.1:41733543-41733562 | None:intergenic | 40.0% | |
| GAGAAGGACATGGTTTCAAA+AGG | - | chr7.1:41733486-41733505 | MS.gene65159:intron | 40.0% | |
| GAGAAGGACGATGAATTAGA+AGG | - | chr7.1:41733564-41733583 | MS.gene65159:intron | 40.0% | |
| GTCTCTGAATGTGACTCATT+TGG | + | chr7.1:41733672-41733691 | None:intergenic | 40.0% | |
| TAAGTCACAGTTAGAGAAGG+AGG | - | chr7.1:41733611-41733630 | MS.gene65159:intron | 40.0% | |
| TAGATCCTTCCGAATTCTTC+CGG | + | chr7.1:41732989-41733008 | None:intergenic | 40.0% | |
| TCAATAGGTCCTATCCATCA+TGG | - | chr7.1:41732898-41732917 | MS.gene65159:CDS | 40.0% | |
| TCAGAGAAATCTACGTCTGT+TGG | + | chr7.1:41734195-41734214 | None:intergenic | 40.0% | |
| TCTGACCGTTATTGCATTCT+TGG | - | chr7.1:41734584-41734603 | MS.gene65159:CDS | 40.0% | |
| TGTGGCACTCTTTGTATCTT+TGG | + | chr7.1:41732826-41732845 | None:intergenic | 40.0% | |
| TTCTCTGACTGTGACTCATT+TGG | + | chr7.1:41733549-41733568 | None:intergenic | 40.0% | |
| TTTCCAAATGTTGACCTTCG+AGG | + | chr7.1:41733335-41733354 | None:intergenic | 40.0% | |
| TTTCCTCGAAGGTCAACATT+TGG | - | chr7.1:41733329-41733348 | MS.gene65159:CDS | 40.0% | |
| ! | ACCTTCGAGGAAATTTTCCA+TGG | + | chr7.1:41733322-41733341 | None:intergenic | 40.0% |
| ! | ACGTAGATTTCTCTGAAGGA+TGG | - | chr7.1:41734199-41734218 | MS.gene65159:CDS | 40.0% |
| ! | GAGAGAAGTACAAGCTTATG+TGG | - | chr7.1:41732941-41732960 | MS.gene65159:CDS | 40.0% |
| ! | TCAACTGGTTCTTGTGATGA+TGG | - | chr7.1:41733212-41733231 | MS.gene65159:CDS | 40.0% |
| ! | TCCACGACAACTTTTCTTCA+AGG | + | chr7.1:41733107-41733126 | None:intergenic | 40.0% |
| !! | GATGATGGATGTGCTATTGT+TGG | - | chr7.1:41733227-41733246 | MS.gene65159:CDS | 40.0% |
| !! | GTGAAGGCATTGAGATCAAA+AGG | - | chr7.1:41734384-41734403 | MS.gene65159:CDS | 40.0% |
| !! | TCTGTATTGCCATGATGGAT+AGG | + | chr7.1:41732910-41732929 | None:intergenic | 40.0% |
| AAACACCGGAAGAATTCGGA+AGG | - | chr7.1:41732981-41733000 | MS.gene65159:CDS | 45.0% | |
| AAAGCCTTCAAGAGAGTTGC+CGG | + | chr7.1:41733079-41733098 | None:intergenic | 45.0% | |
| AAAGCGAAGCTTGATGAACC+AGG | - | chr7.1:41733168-41733187 | MS.gene65159:CDS | 45.0% | |
| AACAGCGAAATGGAGTCAGA+AGG | - | chr7.1:41734083-41734102 | MS.gene65159:CDS | 45.0% | |
| AACGAAAGTAAGAGCAAGGG+CGG | + | chr7.1:41734619-41734638 | None:intergenic | 45.0% | |
| AAGCGAAGCTTGATGAACCA+GGG | - | chr7.1:41733169-41733188 | MS.gene65159:CDS | 45.0% | |
| ACAGTTAGAGAAGGAGGAAG+AGG | - | chr7.1:41733617-41733636 | MS.gene65159:intron | 45.0% | |
| ACCAGGGCACATGAATATCA+AGG | - | chr7.1:41733185-41733204 | MS.gene65159:CDS | 45.0% | |
| ACCTATTGACACCAACTTGG+GGG | + | chr7.1:41732887-41732906 | None:intergenic | 45.0% | |
| ACCTTGATATTCATGTGCCC+TGG | + | chr7.1:41733189-41733208 | None:intergenic | 45.0% | |
| ACGTGGTACTCAAGCTATTG+TGG | - | chr7.1:41733265-41733284 | MS.gene65159:CDS | 45.0% | |
| AGGACCTATTGACACCAACT+TGG | + | chr7.1:41732890-41732909 | None:intergenic | 45.0% | |
| ATAATAAGAGGAACCGGAGG+CGG | - | chr7.1:41733361-41733380 | MS.gene65159:CDS | 45.0% | |
| ATACAAGACTTGGATAGCGC+TGG | - | chr7.1:41734536-41734555 | MS.gene65159:CDS | 45.0% | |
| ATCAGAGAAGGAGAAGGACA+TGG | - | chr7.1:41733476-41733495 | MS.gene65159:intron | 45.0% | |
| ATGCCTTCACATCTTCAGGA+TGG | + | chr7.1:41734374-41734393 | None:intergenic | 45.0% | |
| ATGTCCTTCTCCTTCTCTGA+TGG | + | chr7.1:41733477-41733496 | None:intergenic | 45.0% | |
| CAGATAATAAGAGGAACCGG+AGG | - | chr7.1:41733358-41733377 | MS.gene65159:CDS | 45.0% | |
| CTCAATGCCTTCACATCTTC+AGG | + | chr7.1:41734378-41734397 | None:intergenic | 45.0% | |
| CTCCGGTTCCTCTTATTATC+TGG | + | chr7.1:41733360-41733379 | None:intergenic | 45.0% | |
| GACCTATTGACACCAACTTG+GGG | + | chr7.1:41732888-41732907 | None:intergenic | 45.0% | |
| GCCTTGAAGAAAAGTTGTCG+TGG | - | chr7.1:41733103-41733122 | MS.gene65159:CDS | 45.0% | |
| GGACCTATTGACACCAACTT+GGG | + | chr7.1:41732889-41732908 | None:intergenic | 45.0% | |
| GGAGAATCAACTTCCTTACG+TGG | - | chr7.1:41733248-41733267 | MS.gene65159:CDS | 45.0% | |
| GTCAGAAGGAGAATGAGTTC+AGG | - | chr7.1:41734097-41734116 | MS.gene65159:CDS | 45.0% | |
| TACAAGACTTGGATAGCGCT+GGG | - | chr7.1:41734537-41734556 | MS.gene65159:CDS | 45.0% | |
| TCTATGCCCCTGTATGTAGT+CGG | + | chr7.1:41734123-41734142 | None:intergenic | 45.0% | |
| TGAGTAAAGTAGAGGCTGCA+AGG | + | chr7.1:41734266-41734285 | None:intergenic | 45.0% | |
| TTAACCGGCAACTCTCTTGA+AGG | - | chr7.1:41733072-41733091 | MS.gene65159:CDS | 45.0% | |
| TTAGAGAAGGAGGAAGAGGA+AGG | - | chr7.1:41733621-41733640 | MS.gene65159:intron | 45.0% | |
| ! | AAGGGATTTTGTGCACCGTT+TGG | - | chr7.1:41734403-41734422 | MS.gene65159:CDS | 45.0% |
| !! | TGTATTGGTTACGGACGAGT+CGG | - | chr7.1:41733446-41733465 | MS.gene65159:intron | 45.0% |
| AAGGAGGAAGAGGAAGGAGA+AGG | - | chr7.1:41733627-41733646 | MS.gene65159:intron | 50.0% | |
| AGACTTAAGGCAAGCGCAAC+AGG | - | chr7.1:41734165-41734184 | MS.gene65159:CDS | 50.0% | |
| AGTTCAGGCCGACTACATAC+AGG | - | chr7.1:41734112-41734131 | MS.gene65159:CDS | 50.0% | |
| CCTCACTACATCCAAGTCCA+AGG | - | chr7.1:41733728-41733747 | MS.gene65159:CDS | 50.0% | |
| CCTTGGACTTGGATGTAGTG+AGG | + | chr7.1:41733731-41733750 | None:intergenic | 50.0% | |
| CGACCATCCTGAAGATGTGA+AGG | - | chr7.1:41734368-41734387 | MS.gene65159:CDS | 50.0% | |
| GACACCATCAGAGAAGGAGA+AGG | - | chr7.1:41733470-41733489 | MS.gene65159:intron | 50.0% | |
| GACTTAAGGCAAGCGCAACA+GGG | - | chr7.1:41734166-41734185 | MS.gene65159:CDS | 50.0% | |
| GGCAACTCTCTTGAAGGCTT+TGG | - | chr7.1:41733078-41733097 | MS.gene65159:CDS | 50.0% | |
| GTCATGGTTTACGGTTCACC+CGG | - | chr7.1:41734641-41734660 | MS.gene65159:CDS | 50.0% | |
| GTTCAGGCCGACTACATACA+GGG | - | chr7.1:41734113-41734132 | MS.gene65159:CDS | 50.0% | |
| GTTGTCGTGGATGTTGTTCG+TGG | - | chr7.1:41733116-41733135 | MS.gene65159:CDS | 50.0% | |
| TCGTGGATGTTGTTCGTGGA+TGG | - | chr7.1:41733120-41733139 | MS.gene65159:CDS | 50.0% | |
| TTCAGGCCGACTACATACAG+GGG | - | chr7.1:41734114-41734133 | MS.gene65159:CDS | 50.0% | |
| ! | GGAGTATTACACCCCCAAGT+TGG | - | chr7.1:41732873-41732892 | MS.gene65159:CDS | 50.0% |
| ! | GGTCGTGAAATTTCGGGTGT+TGG | + | chr7.1:41732805-41732824 | None:intergenic | 50.0% |
| !! | ACCCCCAAGTTGGTGTCAAT+AGG | - | chr7.1:41732883-41732902 | MS.gene65159:CDS | 50.0% |
| GTCGGAGACACCATCAGAGA+AGG | - | chr7.1:41733464-41733483 | MS.gene65159:intron | 55.0% | |
| TTAAGGCAAGCGCAACAGGG+AGG | - | chr7.1:41734169-41734188 | MS.gene65159:CDS | 55.0% | |
| ! | GTGCACCGTTTGGAGTGATG+AGG | - | chr7.1:41734413-41734432 | MS.gene65159:CDS | 55.0% |
| CTTGATTGTGTCGCCGCCTC+CGG | + | chr7.1:41733377-41733396 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.1 | gene | 41732736 | 41734674 | 41732736 | ID=MS.gene65159 |
| chr7.1 | mRNA | 41732736 | 41734674 | 41732736 | ID=MS.gene65159.t1;Parent=MS.gene65159 |
| chr7.1 | exon | 41733661 | 41734674 | 41733661 | ID=MS.gene65159.t1.exon1;Parent=MS.gene65159.t1 |
| chr7.1 | CDS | 41733661 | 41734674 | 41733661 | ID=cds.MS.gene65159.t1;Parent=MS.gene65159.t1 |
| chr7.1 | exon | 41732736 | 41733410 | 41732736 | ID=MS.gene65159.t1.exon2;Parent=MS.gene65159.t1 |
| chr7.1 | CDS | 41732736 | 41733410 | 41732736 | ID=cds.MS.gene65159.t1;Parent=MS.gene65159.t1 |
| Gene Sequence |
| Protein sequence |
