Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65429.t1 | XP_013454547.1 | 93.2 | 530 | 26 | 4 | 1 | 525 | 1 | 525 | 1.00E-265 | 925.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65429.t1 | A0A072UHH6 | 93.2 | 530 | 26 | 4 | 1 | 525 | 1 | 525 | 7.3e-266 | 925.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053175 | MS.gene65429 | 0.961954 | 2.64E-120 | -1.69E-46 |
| MS.gene054549 | MS.gene65429 | 0.964417 | 2.67E-123 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65429.t1 | MTR_4g007710 | 95.472 | 530 | 14 | 4 | 1 | 525 | 1 | 525 | 0.0 | 1025 |
| MS.gene65429.t1 | MTR_4g130310 | 50.214 | 468 | 203 | 9 | 60 | 519 | 51 | 496 | 3.63e-137 | 406 |
| MS.gene65429.t1 | MTR_4g130310 | 50.106 | 471 | 198 | 10 | 60 | 519 | 51 | 495 | 4.05e-137 | 406 |
| MS.gene65429.t1 | MTR_4g130340 | 48.879 | 223 | 98 | 3 | 58 | 267 | 13 | 232 | 8.21e-58 | 194 |
| MS.gene65429.t1 | MTR_1g084010 | 52.778 | 144 | 68 | 0 | 110 | 253 | 21 | 164 | 9.42e-45 | 160 |
| MS.gene65429.t1 | MTR_6g013040 | 38.049 | 205 | 109 | 5 | 60 | 262 | 1 | 189 | 5.03e-34 | 128 |
| MS.gene65429.t1 | MTR_6g013260 | 36.585 | 205 | 112 | 5 | 60 | 262 | 1 | 189 | 2.80e-30 | 118 |
| MS.gene65429.t1 | MTR_4g113870 | 71.111 | 45 | 11 | 1 | 186 | 228 | 15 | 59 | 7.70e-17 | 75.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65429.t1 | AT2G24100 | 44.906 | 530 | 216 | 13 | 1 | 519 | 1 | 465 | 8.70e-130 | 386 |
| MS.gene65429.t1 | AT4G30780 | 50.398 | 377 | 150 | 7 | 17 | 370 | 26 | 388 | 4.37e-112 | 345 |
| MS.gene65429.t1 | AT4G30780 | 35.429 | 175 | 92 | 7 | 354 | 525 | 433 | 589 | 1.81e-13 | 73.6 |
| MS.gene65429.t1 | AT3G05770 | 40.000 | 215 | 119 | 4 | 60 | 265 | 20 | 233 | 8.81e-37 | 140 |
| MS.gene65429.t1 | AT3G05770 | 40.000 | 215 | 119 | 4 | 60 | 265 | 20 | 233 | 1.35e-36 | 140 |
| MS.gene65429.t1 | AT1G54300 | 42.500 | 160 | 82 | 4 | 115 | 265 | 2 | 160 | 3.21e-29 | 117 |
Find 121 sgRNAs with CRISPR-Local
Find 241 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATCAGAGTTGAAATCGAATT+TGG | 0.132685 | 4.3:-87765608 | None:intergenic |
| TAAGAGTAAAATGTTTGATT+TGG | 0.223076 | 4.3:+87769118 | MS.gene65429:CDS |
| ACCCTTCTGATCTTTCTTCT+TGG | 0.228703 | 4.3:-87766014 | None:intergenic |
| CTGAGAAACTTATCAGATTC+AGG | 0.259989 | 4.3:-87768753 | None:intergenic |
| CAGAAGTGAACAAAATCTTA+TGG | 0.288359 | 4.3:+87767799 | MS.gene65429:CDS |
| CCCATGCAATCAAAGGTTTC+AGG | 0.301138 | 4.3:+87768721 | MS.gene65429:CDS |
| AAGAGTAAAATGTTTGATTT+GGG | 0.305973 | 4.3:+87769119 | MS.gene65429:CDS |
| TGTTTGGAACAGTGTGATTC+AGG | 0.311820 | 4.3:+87765869 | MS.gene65429:intron |
| CAATGCCCTCAAGGTCTGTT+AGG | 0.323271 | 4.3:+87767560 | MS.gene65429:CDS |
| TTCGATGTCGATGGATGATT+TGG | 0.335720 | 4.3:+87768812 | MS.gene65429:CDS |
| GGACTGCATGATGTGGAATC+AGG | 0.352036 | 4.3:+87767752 | MS.gene65429:CDS |
| AGCTAGGTGAGGTAATTTCT+TGG | 0.354560 | 4.3:-87767844 | None:intergenic |
| AGAAGAAGTGAAGGGAAAGC+TGG | 0.361169 | 4.3:+87767722 | MS.gene65429:CDS |
| CATTGAATTGAGTGATGGTT+TGG | 0.363177 | 4.3:+87767697 | MS.gene65429:CDS |
| ACAATAACTTCCAATGTTCC+TGG | 0.363801 | 4.3:-87766628 | None:intergenic |
| TCCGATTTCATACAATCCTT+TGG | 0.368995 | 4.3:+87765904 | MS.gene65429:CDS |
| TTGCGAAGCATAAGCTTGTA+TGG | 0.377568 | 4.3:+87766518 | MS.gene65429:CDS |
| GTCTAGATATGAAGGAGATT+TGG | 0.382647 | 4.3:+87766480 | MS.gene65429:CDS |
| TGCCACAAGGTATGCTTCCT+TGG | 0.393612 | 4.3:-87767210 | None:intergenic |
| TCCTGAAACCTTTGATTGCA+TGG | 0.393638 | 4.3:-87768722 | None:intergenic |
| TCCAAAGGATTGTATGAAAT+CGG | 0.396620 | 4.3:-87765905 | None:intergenic |
| TTTCTGAAGAAGGCAGTATA+AGG | 0.405521 | 4.3:-87768997 | None:intergenic |
| CAATCAACAACAGACTTTAC+TGG | 0.408931 | 4.3:+87767231 | MS.gene65429:CDS |
| GGAGAATCCAACACAAATTC+CGG | 0.411628 | 4.3:-87767641 | None:intergenic |
| CCACATCGGACACTGCATTT+CGG | 0.412120 | 4.3:+87768839 | MS.gene65429:CDS |
| GCAGTTCCAGTCTCAAAGTA+TGG | 0.416139 | 4.3:-87767662 | None:intergenic |
| CAAGATGATGATGATGCTTC+TGG | 0.418720 | 4.3:+87769149 | MS.gene65429:CDS |
| TCAGAGTTGAAATCGAATTT+GGG | 0.419622 | 4.3:-87765607 | None:intergenic |
| CTATCAGAATCCTCGGACAT+AGG | 0.423015 | 4.3:-87769269 | None:intergenic |
| CCTGAAACCTTTGATTGCAT+GGG | 0.423667 | 4.3:-87768721 | None:intergenic |
| TGTGATTCAGGTGATGATTC+TGG | 0.430308 | 4.3:+87765881 | MS.gene65429:CDS |
| CTTGTATGGGAAGTTCTTGA+TGG | 0.433138 | 4.3:+87766532 | MS.gene65429:CDS |
| AATGTTCCTGGAGCATCCTC+AGG | 0.433779 | 4.3:-87766616 | None:intergenic |
| CCAACACAAATTCCGGTTGT+TGG | 0.433853 | 4.3:-87767634 | None:intergenic |
| GGTAGCCAGCAGCAAGGAAA+TGG | 0.434094 | 4.3:+87769170 | MS.gene65429:CDS |
| AAGGTATGCTTCCTTGGTTG+TGG | 0.434236 | 4.3:-87767204 | None:intergenic |
| AGCTCTGTCATTAGTGAAGC+TGG | 0.450625 | 4.3:-87768883 | None:intergenic |
| AGAAGTGAACAAAATCTTAT+GGG | 0.452591 | 4.3:+87767800 | MS.gene65429:CDS |
| CAACTTTCTGAGCCAACAAC+CGG | 0.458040 | 4.3:+87767622 | MS.gene65429:CDS |
| CTGAAACCTTTGATTGCATG+GGG | 0.466395 | 4.3:-87768720 | None:intergenic |
| GATTCTCCATACTTTGAGAC+TGG | 0.468589 | 4.3:+87767656 | MS.gene65429:CDS |
| TTATTTATACCTATGTATGC+TGG | 0.472570 | 4.3:-87767262 | None:intergenic |
| GAAGAAGTGAAGGGAAAGCT+GGG | 0.473769 | 4.3:+87767723 | MS.gene65429:CDS |
| CACTTTGTGCAATGCCCTCA+AGG | 0.479139 | 4.3:+87767551 | MS.gene65429:CDS |
| ACAGACCATTTCCTTGCTGC+TGG | 0.483280 | 4.3:-87769175 | None:intergenic |
| CACTAATGACAGAGCTGTGT+TGG | 0.483298 | 4.3:+87768890 | MS.gene65429:CDS |
| GAAGAAGAGTCCTTCACTGT+TGG | 0.484620 | 4.3:+87765955 | MS.gene65429:CDS |
| AATTCCATGGTCTGATATCA+TGG | 0.485625 | 4.3:+87766576 | MS.gene65429:CDS |
| CCAATCTTCAAAACAGTAGC+AGG | 0.487934 | 4.3:-87766094 | None:intergenic |
| TTTCAACTCTGATTCTCCTA+AGG | 0.489774 | 4.3:+87765618 | MS.gene65429:CDS |
| CCAACAACCGGAATTTGTGT+TGG | 0.491090 | 4.3:+87767634 | MS.gene65429:CDS |
| TTGAGTCAGATTAAGTTGCC+TGG | 0.498526 | 4.3:+87768780 | MS.gene65429:CDS |
| AGACGCAAACCAAGTGGACT+TGG | 0.503986 | 4.3:-87765932 | None:intergenic |
| TCTTCACCCTTCGATGTCGA+TGG | 0.504190 | 4.3:+87768803 | MS.gene65429:CDS |
| CAGTATAAGTCTAGATATGA+AGG | 0.517526 | 4.3:+87766472 | MS.gene65429:intron |
| ATTTGCTTCTGAATCTTCCA+AGG | 0.519721 | 4.3:+87769219 | MS.gene65429:CDS |
| CACTCAATTCAATGTGGTCA+TGG | 0.523533 | 4.3:-87767688 | None:intergenic |
| TGTGGCAGAGAAGCAATCCT+TGG | 0.523882 | 4.3:-87769236 | None:intergenic |
| GAAATTACCTCACCTAGCTC+AGG | 0.524612 | 4.3:+87767848 | MS.gene65429:CDS |
| TGAGGATGCTCCAGGAACAT+TGG | 0.526671 | 4.3:+87766618 | MS.gene65429:CDS |
| GTCTGATATCATGGCTCTCA+AGG | 0.526777 | 4.3:+87766585 | MS.gene65429:CDS |
| TAATGACAGAGCTGTGTTGG+AGG | 0.526990 | 4.3:+87768893 | MS.gene65429:CDS |
| CATGATGTGGAATCAGGGTC+TGG | 0.530089 | 4.3:+87767758 | MS.gene65429:CDS |
| AGAATAAGATTGAAATTCCA+TGG | 0.535046 | 4.3:+87766563 | MS.gene65429:CDS |
| TTGGATGAACCAAGTCCACT+TGG | 0.535980 | 4.3:+87765923 | MS.gene65429:CDS |
| TTCTGTTCATCATCAGAGAC+AGG | 0.536856 | 4.3:-87768954 | None:intergenic |
| GACATCGAAGGGTGAAGACC+AGG | 0.537780 | 4.3:-87768798 | None:intergenic |
| TGCTGCTGATAGCAAGCTCA+AGG | 0.539666 | 4.3:+87766060 | MS.gene65429:CDS |
| TTGGCTCAGAAAGTTGAGAC+GGG | 0.539829 | 4.3:-87767615 | None:intergenic |
| CAGGAGGGTCTTTCTGAAGA+AGG | 0.541302 | 4.3:-87769007 | None:intergenic |
| CTGTCTAGGAAAGAATCAGC+TGG | 0.542082 | 4.3:+87769194 | MS.gene65429:CDS |
| AACTACCCTGAGGATGCTCC+AGG | 0.542158 | 4.3:+87766610 | MS.gene65429:CDS |
| GCCTCCCTAACAGACCTTGA+GGG | 0.542641 | 4.3:-87767565 | None:intergenic |
| ACACTGCATTTCGGAACAGA+TGG | 0.543363 | 4.3:+87768848 | MS.gene65429:CDS |
| AATGCCCTCAAGGTCTGTTA+GGG | 0.546969 | 4.3:+87767561 | MS.gene65429:CDS |
| TGTATTTGTTGTAGCTGGCA+AGG | 0.547557 | 4.3:+87767154 | MS.gene65429:intron |
| TGCGAAGCATAAGCTTGTAT+GGG | 0.558386 | 4.3:+87766519 | MS.gene65429:CDS |
| TTCCAAGAAGAAAGATCAGA+AGG | 0.560722 | 4.3:+87766012 | MS.gene65429:CDS |
| GCCCTCAAGGTCTGTTAGGG+AGG | 0.562789 | 4.3:+87767564 | MS.gene65429:CDS |
| GGTTTGGATAGAAGAAGTGA+AGG | 0.566531 | 4.3:+87767713 | MS.gene65429:CDS |
| AACATGACTATCAGAATCCT+CGG | 0.577952 | 4.3:-87769276 | None:intergenic |
| CACTGCATTTCGGAACAGAT+GGG | 0.578013 | 4.3:+87768849 | MS.gene65429:CDS |
| TAGATATGAAGGAGATTTGG+TGG | 0.584423 | 4.3:+87766483 | MS.gene65429:CDS |
| TGCCTCCCTAACAGACCTTG+AGG | 0.584503 | 4.3:-87767566 | None:intergenic |
| GTGGACAAGCCAGCATACAT+AGG | 0.584639 | 4.3:+87767253 | MS.gene65429:CDS |
| AGCAAGGAAATGGTCTGTCT+AGG | 0.585074 | 4.3:+87769180 | MS.gene65429:CDS |
| AAATCATCCATCGACATCGA+AGG | 0.585590 | 4.3:-87768810 | None:intergenic |
| CCAAAGGAATTACCTGAGCT+AGG | 0.585655 | 4.3:-87767860 | None:intergenic |
| AGTGGACTTGGTTCATCCAA+AGG | 0.586408 | 4.3:-87765920 | None:intergenic |
| TTCTTCAGACGCAAACCAAG+TGG | 0.595315 | 4.3:-87765938 | None:intergenic |
| ATCAAAGGTTTCAGGAGCAG+AGG | 0.596879 | 4.3:+87768729 | MS.gene65429:CDS |
| GACTGCATGATGTGGAATCA+GGG | 0.597635 | 4.3:+87767753 | MS.gene65429:CDS |
| GACATAGGAAACAGAAAATG+TGG | 0.600386 | 4.3:-87769254 | None:intergenic |
| TGAATCAAATCCAACAGTGA+AGG | 0.602378 | 4.3:-87765965 | None:intergenic |
| GTTGGCTCAGAAAGTTGAGA+CGG | 0.604139 | 4.3:-87767616 | None:intergenic |
| GAAGATAGAAAAGTTGATGA+GGG | 0.606665 | 4.3:+87769080 | MS.gene65429:CDS |
| TTTGAAGATTGGTACTTGGG+AGG | 0.609526 | 4.3:+87766105 | MS.gene65429:CDS |
| GACCACATTGAATTGAGTGA+TGG | 0.611625 | 4.3:+87767692 | MS.gene65429:CDS |
| TGAAGATAGAAAAGTTGATG+AGG | 0.612436 | 4.3:+87769079 | MS.gene65429:CDS |
| AATCATCCATCGACATCGAA+GGG | 0.616354 | 4.3:-87768809 | None:intergenic |
| GTCTGTTGTTGATTGCCACA+AGG | 0.622596 | 4.3:-87767223 | None:intergenic |
| CTTGAGGGCATTGCACAAAG+TGG | 0.635048 | 4.3:-87767550 | None:intergenic |
| TCAACAACAGACTTTACTGG+TGG | 0.640598 | 4.3:+87767234 | MS.gene65429:CDS |
| ATGTTCCTGGAGCATCCTCA+GGG | 0.646838 | 4.3:-87766615 | None:intergenic |
| GTTTGGATAGAAGAAGTGAA+GGG | 0.651890 | 4.3:+87767714 | MS.gene65429:CDS |
| TCCAAGAAGAAAGATCAGAA+GGG | 0.651999 | 4.3:+87766013 | MS.gene65429:CDS |
| TGTTCATCATCAGAGACAGG+TGG | 0.655949 | 4.3:-87768951 | None:intergenic |
| ATTTGTTGTAGCTGGCAAGG+AGG | 0.658694 | 4.3:+87767157 | MS.gene65429:intron |
| GGAATTACCTGAGCTAGGTG+AGG | 0.671578 | 4.3:-87767855 | None:intergenic |
| GGGAGATCAATCCACAACCA+AGG | 0.673080 | 4.3:+87767193 | MS.gene65429:CDS |
| GCTTCTGGTAGCCAGCAGCA+AGG | 0.673116 | 4.3:+87769164 | MS.gene65429:CDS |
| ATGAACAGAATGTCATGACA+AGG | 0.678824 | 4.3:+87768967 | MS.gene65429:CDS |
| TGGCTCAGAAAGTTGAGACG+GGG | 0.681167 | 4.3:-87767614 | None:intergenic |
| GATGATTTGGTTAACCACAT+CGG | 0.685792 | 4.3:+87768825 | MS.gene65429:CDS |
| AGAGCCATGATATCAGACCA+TGG | 0.692062 | 4.3:-87766580 | None:intergenic |
| TGAAACCTTTGATTGCATGG+GGG | 0.696180 | 4.3:-87768719 | None:intergenic |
| CCGAAATGCAGTGTCCGATG+TGG | 0.700782 | 4.3:-87768839 | None:intergenic |
| AACCATCACTCAATTCAATG+TGG | 0.718712 | 4.3:-87767694 | None:intergenic |
| TCTCAAGGCAAACTACCCTG+AGG | 0.745164 | 4.3:+87766600 | MS.gene65429:CDS |
| TGAACAGAATGTCATGACAA+GGG | 0.758366 | 4.3:+87768968 | MS.gene65429:CDS |
| AACCAAGGAAGCATACCTTG+TGG | 0.758682 | 4.3:+87767208 | MS.gene65429:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAATCATTATCATTATATAA+TGG | + | chr4.3:87768557-87768576 | MS.gene65429:intron | 10.0% |
| !!! | TTTTAATTTCAAATTTAACA+TGG | + | chr4.3:87767998-87768017 | MS.gene65429:intron | 10.0% |
| !!! | TTTTATACATTGTTTTAATT+TGG | + | chr4.3:87767890-87767909 | MS.gene65429:intron | 10.0% |
| !!! | TTTTTTGTTAATTTCATATT+GGG | + | chr4.3:87765766-87765785 | MS.gene65429:intron | 10.0% |
| !!! | TTTTTTTGTTAATTTCATAT+TGG | + | chr4.3:87765765-87765784 | MS.gene65429:intron | 10.0% |
| !! | AATAAGTTATTTATCAAAAC+AGG | - | chr4.3:87766198-87766217 | None:intergenic | 15.0% |
| !! | AGAGGAATAATATTATAAAA+TGG | - | chr4.3:87768501-87768520 | None:intergenic | 15.0% |
| !! | ATAAGTTATTTATCAAAACA+GGG | - | chr4.3:87766197-87766216 | None:intergenic | 15.0% |
| !! | TGTATAAAAAAAATATCCAA+AGG | - | chr4.3:87767879-87767898 | None:intergenic | 15.0% |
| !!! | ATATGGAATTATATCATTTT+CGG | - | chr4.3:87768675-87768694 | None:intergenic | 15.0% |
| !!! | TTTTATTGCTTAATAGATTT+TGG | + | chr4.3:87766861-87766880 | MS.gene65429:intron | 15.0% |
| !! | AATTTAATCATTTGATACTC+TGG | - | chr4.3:87768085-87768104 | None:intergenic | 20.0% |
| !! | TAAGAGTAAAATGTTTGATT+TGG | + | chr4.3:87769118-87769137 | MS.gene65429:CDS | 20.0% |
| !! | TAATTTATTGTGGATATCTA+CGG | + | chr4.3:87768382-87768401 | MS.gene65429:intron | 20.0% |
| !! | TATCTCAAGAAATACAAAAA+AGG | - | chr4.3:87767943-87767962 | None:intergenic | 20.0% |
| !! | TTTGTTTGTAGAAATAATGA+AGG | + | chr4.3:87766171-87766190 | MS.gene65429:intron | 20.0% |
| !!! | AAGAGTAAAATGTTTGATTT+GGG | + | chr4.3:87769119-87769138 | MS.gene65429:CDS | 20.0% |
| !!! | AGAGTATCAAATGATTAAAT+TGG | + | chr4.3:87768084-87768103 | MS.gene65429:intron | 20.0% |
| !!! | ATCTTTTAAATTTTCCTGAA+TGG | + | chr4.3:87768034-87768053 | MS.gene65429:intron | 20.0% |
| !!! | ATTCTGTATTTTGTTGTTAT+AGG | + | chr4.3:87767525-87767544 | MS.gene65429:intron | 20.0% |
| !!! | ATTGTGTTTTTTTGTTTGTT+TGG | + | chr4.3:87765853-87765872 | MS.gene65429:intron | 20.0% |
| !!! | GTTTAATTTTCAGTTTGTTA+TGG | + | chr4.3:87765791-87765810 | MS.gene65429:intron | 20.0% |
| !!! | TATGGAATTATATCATTTTC+GGG | - | chr4.3:87768674-87768693 | None:intergenic | 20.0% |
| !!! | TGTTGATTATGTTTTTGTTA+TGG | + | chr4.3:87768428-87768447 | MS.gene65429:intron | 20.0% |
| !!! | TTAGTTGTTTTCAATTCATT+TGG | + | chr4.3:87767465-87767484 | MS.gene65429:intron | 20.0% |
| !!! | TTTTAATCATTTATGTGTCA+TGG | + | chr4.3:87766706-87766725 | MS.gene65429:intron | 20.0% |
| !!! | TTTTATTGCTCAATAGATTT+TGG | + | chr4.3:87766807-87766826 | MS.gene65429:intron | 20.0% |
| !!! | TTTTATTGCTTACTAGATTT+TGG | + | chr4.3:87766753-87766772 | MS.gene65429:intron | 20.0% |
| ! | AAATAGCATATCGCAAAATA+TGG | - | chr4.3:87767026-87767045 | None:intergenic | 25.0% |
| ! | AATGCATTAAGATCTATTGA+GGG | - | chr4.3:87768326-87768345 | None:intergenic | 25.0% |
| ! | AATTTATTGTGGATATCTAC+GGG | + | chr4.3:87768383-87768402 | MS.gene65429:intron | 25.0% |
| ! | AGAAGTGAACAAAATCTTAT+GGG | + | chr4.3:87767800-87767819 | MS.gene65429:CDS | 25.0% |
| ! | AGAATAAGATTGAAATTCCA+TGG | + | chr4.3:87766563-87766582 | MS.gene65429:CDS | 25.0% |
| ! | ATAATGATTAAAGACAGTAG+CGG | - | chr4.3:87768547-87768566 | None:intergenic | 25.0% |
| ! | ATACAAAAAAGGCTATAAAC+AGG | - | chr4.3:87767932-87767951 | None:intergenic | 25.0% |
| ! | CTGCAGATGATAATAAAATA+TGG | - | chr4.3:87768692-87768711 | None:intergenic | 25.0% |
| ! | GTGTTAGATATATGCTATAA+TGG | + | chr4.3:87766969-87766988 | MS.gene65429:intron | 25.0% |
| ! | TCACTTCAAAAAAGTCAAAT+TGG | + | chr4.3:87765540-87765559 | MS.gene65429:CDS | 25.0% |
| ! | TTATTTATACCTATGTATGC+TGG | - | chr4.3:87767265-87767284 | None:intergenic | 25.0% |
| ! | TTTGTTAATTTCATATTGGG+TGG | + | chr4.3:87765769-87765788 | MS.gene65429:intron | 25.0% |
| !! | GTTGTCTTCATAAGTTATTT+TGG | + | chr4.3:87766316-87766335 | MS.gene65429:intron | 25.0% |
| !! | TTTAAATTTTCCTGAATGGT+CGG | + | chr4.3:87768038-87768057 | MS.gene65429:intron | 25.0% |
| !!! | ATGAAATTAATGATGGGTTT+TGG | - | chr4.3:87765676-87765695 | None:intergenic | 25.0% |
| !!! | ATTGTTTTAATTTGGTCTGA+TGG | + | chr4.3:87767898-87767917 | MS.gene65429:intron | 25.0% |
| !!! | ATTTTGAACCTGTTTTTCTT+CGG | - | chr4.3:87769036-87769055 | None:intergenic | 25.0% |
| !!! | GATGATGTGATTGTTATTTA+TGG | + | chr4.3:87766444-87766463 | MS.gene65429:intron | 25.0% |
| AATATTATTCCTCTGTTCTG+AGG | + | chr4.3:87768507-87768526 | MS.gene65429:intron | 30.0% | |
| AATCACATCATTAAGACATC+AGG | - | chr4.3:87767508-87767527 | None:intergenic | 30.0% | |
| ACCCAGAATGAAATTAATGA+TGG | - | chr4.3:87765683-87765702 | None:intergenic | 30.0% | |
| ACCCATCATTAATTTCATTC+TGG | + | chr4.3:87765678-87765697 | MS.gene65429:intron | 30.0% | |
| ATCAGAGTTGAAATCGAATT+TGG | - | chr4.3:87765611-87765630 | None:intergenic | 30.0% | |
| ATGCATTAAGATCTATTGAG+GGG | - | chr4.3:87768325-87768344 | None:intergenic | 30.0% | |
| ATTGACAACATATGCTAAGT+TGG | + | chr4.3:87767129-87767148 | MS.gene65429:intron | 30.0% | |
| CAGAAGTGAACAAAATCTTA+TGG | + | chr4.3:87767799-87767818 | MS.gene65429:CDS | 30.0% | |
| CAGTATAAGTCTAGATATGA+AGG | + | chr4.3:87766472-87766491 | MS.gene65429:intron | 30.0% | |
| CCCAGAATGAAATTAATGAT+GGG | - | chr4.3:87765682-87765701 | None:intergenic | 30.0% | |
| CCCATCATTAATTTCATTCT+GGG | + | chr4.3:87765679-87765698 | MS.gene65429:intron | 30.0% | |
| GAAGAAAAACAGGTTCAAAA+TGG | + | chr4.3:87769035-87769054 | MS.gene65429:CDS | 30.0% | |
| GAATGCATTAAGATCTATTG+AGG | - | chr4.3:87768327-87768346 | None:intergenic | 30.0% | |
| GATTAAATTGGCAGTATGTT+TGG | + | chr4.3:87768096-87768115 | MS.gene65429:intron | 30.0% | |
| TAATGATTAAAGACAGTAGC+GGG | - | chr4.3:87768546-87768565 | None:intergenic | 30.0% | |
| TAGATTGTACCTTGACTAAA+TGG | - | chr4.3:87768210-87768229 | None:intergenic | 30.0% | |
| TCAGAGTTGAAATCGAATTT+GGG | - | chr4.3:87765610-87765629 | None:intergenic | 30.0% | |
| TCCAAAGGATTGTATGAAAT+CGG | - | chr4.3:87765908-87765927 | None:intergenic | 30.0% | |
| TGAAAGAAAAAGAGAACCTT+AGG | - | chr4.3:87765637-87765656 | None:intergenic | 30.0% | |
| TTTCTGATTAATCTGCAATC+CGG | + | chr4.3:87768277-87768296 | MS.gene65429:intron | 30.0% | |
| ! | CATAAGATTTTGTTCACTTC+TGG | - | chr4.3:87767801-87767820 | None:intergenic | 30.0% |
| ! | CATCACATGTGTCTAAAATA+TGG | + | chr4.3:87768601-87768620 | MS.gene65429:intron | 30.0% |
| !! | CAATTCATTTGGTAATGAAG+TGG | + | chr4.3:87767476-87767495 | MS.gene65429:intron | 30.0% |
| !! | GAAGATAGAAAAGTTGATGA+GGG | + | chr4.3:87769080-87769099 | MS.gene65429:CDS | 30.0% |
| !! | TGAAGATAGAAAAGTTGATG+AGG | + | chr4.3:87769079-87769098 | MS.gene65429:CDS | 30.0% |
| !! | TTTTGAACCTGTTTTTCTTC+GGG | - | chr4.3:87769035-87769054 | None:intergenic | 30.0% |
| !!! | TGTTTTGAAGATTGGTACTT+GGG | + | chr4.3:87766102-87766121 | MS.gene65429:CDS | 30.0% |
| AAAACAAATCTGTGCACTCT+TGG | - | chr4.3:87767442-87767461 | None:intergenic | 35.0% | |
| AAATCTCGACCATTTAGTCA+AGG | + | chr4.3:87768198-87768217 | MS.gene65429:intron | 35.0% | |
| AACATGACTATCAGAATCCT+CGG | - | chr4.3:87769279-87769298 | None:intergenic | 35.0% | |
| AACCATCACTCAATTCAATG+TGG | - | chr4.3:87767697-87767716 | None:intergenic | 35.0% | |
| AAGGTACAATCTACATCCAA+TGG | + | chr4.3:87768217-87768236 | MS.gene65429:intron | 35.0% | |
| AATCAAAAACCTCAGAACAG+AGG | - | chr4.3:87768519-87768538 | None:intergenic | 35.0% | |
| AATTCCATGGTCTGATATCA+TGG | + | chr4.3:87766576-87766595 | MS.gene65429:CDS | 35.0% | |
| ACAATAACTTCCAATGTTCC+TGG | - | chr4.3:87766631-87766650 | None:intergenic | 35.0% | |
| ATGAACAGAATGTCATGACA+AGG | + | chr4.3:87768967-87768986 | MS.gene65429:CDS | 35.0% | |
| ATTGATCTCCCTGAAAAACA+GGG | - | chr4.3:87767184-87767203 | None:intergenic | 35.0% | |
| ATTTGCTTCTGAATCTTCCA+AGG | + | chr4.3:87769219-87769238 | MS.gene65429:CDS | 35.0% | |
| CAATCAACAACAGACTTTAC+TGG | + | chr4.3:87767231-87767250 | MS.gene65429:CDS | 35.0% | |
| CACCATCTCAAAACTTATGA+TGG | + | chr4.3:87766410-87766429 | MS.gene65429:intron | 35.0% | |
| CATTGAATTGAGTGATGGTT+TGG | + | chr4.3:87767697-87767716 | MS.gene65429:CDS | 35.0% | |
| CGGGTGATAATAAAATCACA+AGG | - | chr4.3:87768655-87768674 | None:intergenic | 35.0% | |
| CTGAGAAACTTATCAGATTC+AGG | - | chr4.3:87768756-87768775 | None:intergenic | 35.0% | |
| GAATGGCGGTAAAATCAAAA+CGG | + | chr4.3:87767325-87767344 | MS.gene65429:intron | 35.0% | |
| GACATAGGAAACAGAAAATG+TGG | - | chr4.3:87769257-87769276 | None:intergenic | 35.0% | |
| GTCTAGATATGAAGGAGATT+TGG | + | chr4.3:87766480-87766499 | MS.gene65429:CDS | 35.0% | |
| GTTTGGATAGAAGAAGTGAA+GGG | + | chr4.3:87767714-87767733 | MS.gene65429:CDS | 35.0% | |
| TAGATATGAAGGAGATTTGG+TGG | + | chr4.3:87766483-87766502 | MS.gene65429:CDS | 35.0% | |
| TCCAAGAAGAAAGATCAGAA+GGG | + | chr4.3:87766013-87766032 | MS.gene65429:CDS | 35.0% | |
| TCCGATTTCATACAATCCTT+TGG | + | chr4.3:87765904-87765923 | MS.gene65429:CDS | 35.0% | |
| TGAACAGAATGTCATGACAA+GGG | + | chr4.3:87768968-87768987 | MS.gene65429:CDS | 35.0% | |
| TGAATCAAATCCAACAGTGA+AGG | - | chr4.3:87765968-87765987 | None:intergenic | 35.0% | |
| TTCCAAGAAGAAAGATCAGA+AGG | + | chr4.3:87766012-87766031 | MS.gene65429:CDS | 35.0% | |
| TTCTGATTAATCTGCAATCC+GGG | + | chr4.3:87768278-87768297 | MS.gene65429:intron | 35.0% | |
| TTGACTAAATGGTCGAGATT+TGG | - | chr4.3:87768199-87768218 | None:intergenic | 35.0% | |
| TTGTCAAATAGCTTCTGTAG+CGG | + | chr4.3:87767056-87767075 | MS.gene65429:intron | 35.0% | |
| TTTCAACTCTGATTCTCCTA+AGG | + | chr4.3:87765618-87765637 | MS.gene65429:CDS | 35.0% | |
| TTTGGATCAGTTATGTGTCA+TGG | + | chr4.3:87766771-87766790 | MS.gene65429:intron | 35.0% | |
| ! | AAGATTTTGTTCACTTCTGG+AGG | - | chr4.3:87767798-87767817 | None:intergenic | 35.0% |
| ! | TTAGTGAAGCTGGAATTTTC+AGG | - | chr4.3:87768876-87768895 | None:intergenic | 35.0% |
| ! | TTTCTGAAGAAGGCAGTATA+AGG | - | chr4.3:87769000-87769019 | None:intergenic | 35.0% |
| !! | GATGATTTGGTTAACCACAT+CGG | + | chr4.3:87768825-87768844 | MS.gene65429:CDS | 35.0% |
| !!! | CACCATCATAAGTTTTGAGA+TGG | - | chr4.3:87766415-87766434 | None:intergenic | 35.0% |
| !!! | CTGTTTTGAAGATTGGTACT+TGG | + | chr4.3:87766101-87766120 | MS.gene65429:CDS | 35.0% |
| AAATCATCCATCGACATCGA+AGG | - | chr4.3:87768813-87768832 | None:intergenic | 40.0% | |
| AAATCTGTGCACTCTTGGAT+TGG | - | chr4.3:87767437-87767456 | None:intergenic | 40.0% | |
| AATCATCCATCGACATCGAA+GGG | - | chr4.3:87768812-87768831 | None:intergenic | 40.0% | |
| ACCCTTCTGATCTTTCTTCT+TGG | - | chr4.3:87766017-87766036 | None:intergenic | 40.0% | |
| AGCTAGGTGAGGTAATTTCT+TGG | - | chr4.3:87767847-87767866 | None:intergenic | 40.0% | |
| ATAATCAACACTAGTGCAGC+TGG | - | chr4.3:87768418-87768437 | None:intergenic | 40.0% | |
| ATGAGTCCATGACACATAAC+TGG | - | chr4.3:87766780-87766799 | None:intergenic | 40.0% | |
| ATTAACCCCCATGCAATCAA+AGG | + | chr4.3:87768714-87768733 | MS.gene65429:CDS | 40.0% | |
| ATTTGCATGCACAGGTTCAA+CGG | + | chr4.3:87768245-87768264 | MS.gene65429:intron | 40.0% | |
| CACTCAATTCAATGTGGTCA+TGG | - | chr4.3:87767691-87767710 | None:intergenic | 40.0% | |
| CCAATCTTCAAAACAGTAGC+AGG | - | chr4.3:87766097-87766116 | None:intergenic | 40.0% | |
| CCTGAAACCTTTGATTGCAT+GGG | - | chr4.3:87768724-87768743 | None:intergenic | 40.0% | |
| CTGAAACCTTTGATTGCATG+GGG | - | chr4.3:87768723-87768742 | None:intergenic | 40.0% | |
| CTTGTATGGGAAGTTCTTGA+TGG | + | chr4.3:87766532-87766551 | MS.gene65429:CDS | 40.0% | |
| GACCACATTGAATTGAGTGA+TGG | + | chr4.3:87767692-87767711 | MS.gene65429:CDS | 40.0% | |
| GATTGATCTCCCTGAAAAAC+AGG | - | chr4.3:87767185-87767204 | None:intergenic | 40.0% | |
| GGAGAATCCAACACAAATTC+CGG | - | chr4.3:87767644-87767663 | None:intergenic | 40.0% | |
| GGTTTGGATAGAAGAAGTGA+AGG | + | chr4.3:87767713-87767732 | MS.gene65429:CDS | 40.0% | |
| TCAACAACAGACTTTACTGG+TGG | + | chr4.3:87767234-87767253 | MS.gene65429:CDS | 40.0% | |
| TCCTGAAACCTTTGATTGCA+TGG | - | chr4.3:87768725-87768744 | None:intergenic | 40.0% | |
| TCTCAAGTGCATGATTGGAA+TGG | + | chr4.3:87767308-87767327 | MS.gene65429:intron | 40.0% | |
| TGAAACCTTTGATTGCATGG+GGG | - | chr4.3:87768722-87768741 | None:intergenic | 40.0% | |
| TGCATGCAAATCTCAACCAT+TGG | - | chr4.3:87768236-87768255 | None:intergenic | 40.0% | |
| TGCGAAGCATAAGCTTGTAT+GGG | + | chr4.3:87766519-87766538 | MS.gene65429:CDS | 40.0% | |
| TGGCAGTATGTTTGGTTGTT+TGG | + | chr4.3:87768104-87768123 | MS.gene65429:intron | 40.0% | |
| TGTCATCTCAAGTGCATGAT+TGG | + | chr4.3:87767303-87767322 | MS.gene65429:intron | 40.0% | |
| TGTGATTCAGGTGATGATTC+TGG | + | chr4.3:87765881-87765900 | MS.gene65429:CDS | 40.0% | |
| TTCGATGTCGATGGATGATT+TGG | + | chr4.3:87768812-87768831 | MS.gene65429:CDS | 40.0% | |
| TTCTGTTCATCATCAGAGAC+AGG | - | chr4.3:87768957-87768976 | None:intergenic | 40.0% | |
| TTGATCTCCCTGAAAAACAG+GGG | - | chr4.3:87767183-87767202 | None:intergenic | 40.0% | |
| TTGCGAAGCATAAGCTTGTA+TGG | + | chr4.3:87766518-87766537 | MS.gene65429:CDS | 40.0% | |
| TTTAGATCAACCCTCAATGC+CGG | + | chr4.3:87768145-87768164 | MS.gene65429:intron | 40.0% | |
| TTTGAAGATTGGTACTTGGG+AGG | + | chr4.3:87766105-87766124 | MS.gene65429:CDS | 40.0% | |
| TTTGGACCAGTTATGTGTCA+TGG | + | chr4.3:87766933-87766952 | MS.gene65429:intron | 40.0% | |
| ! | CAAGATGATGATGATGCTTC+TGG | + | chr4.3:87769149-87769168 | MS.gene65429:CDS | 40.0% |
| ! | TGTTTGGAACAGTGTGATTC+AGG | + | chr4.3:87765869-87765888 | MS.gene65429:intron | 40.0% |
| ! | TTGAGTCAGATTAAGTTGCC+TGG | + | chr4.3:87768780-87768799 | MS.gene65429:CDS | 40.0% |
| ! | TTTTCTGTTTCCTATGTCCG+AGG | + | chr4.3:87769259-87769278 | MS.gene65429:CDS | 40.0% |
| !! | GATTCTCCATACTTTGAGAC+TGG | + | chr4.3:87767656-87767675 | MS.gene65429:CDS | 40.0% |
| !! | GATTTTTGGACTGCATGATG+TGG | + | chr4.3:87767745-87767764 | MS.gene65429:CDS | 40.0% |
| !! | TGGTGTGTATTTGTTGTAGC+TGG | + | chr4.3:87767149-87767168 | MS.gene65429:intron | 40.0% |
| !! | TGTATTTGTTGTAGCTGGCA+AGG | + | chr4.3:87767154-87767173 | MS.gene65429:intron | 40.0% |
| !!! | CCTGCTACTGTTTTGAAGAT+TGG | + | chr4.3:87766094-87766113 | MS.gene65429:CDS | 40.0% |
| AAGGTATGCTTCCTTGGTTG+TGG | - | chr4.3:87767207-87767226 | None:intergenic | 45.0% | |
| AATGCCCTCAAGGTCTGTTA+GGG | + | chr4.3:87767561-87767580 | MS.gene65429:CDS | 45.0% | |
| ACACTGCATTTCGGAACAGA+TGG | + | chr4.3:87768848-87768867 | MS.gene65429:CDS | 45.0% | |
| AGAAGAAGTGAAGGGAAAGC+TGG | + | chr4.3:87767722-87767741 | MS.gene65429:CDS | 45.0% | |
| AGAGCCATGATATCAGACCA+TGG | - | chr4.3:87766583-87766602 | None:intergenic | 45.0% | |
| AGCAAGGAAATGGTCTGTCT+AGG | + | chr4.3:87769180-87769199 | MS.gene65429:CDS | 45.0% | |
| AGCTCTGTCATTAGTGAAGC+TGG | - | chr4.3:87768886-87768905 | None:intergenic | 45.0% | |
| ATCAAAGGTTTCAGGAGCAG+AGG | + | chr4.3:87768729-87768748 | MS.gene65429:CDS | 45.0% | |
| ATTAATCTGCAATCCGGGTG+AGG | + | chr4.3:87768283-87768302 | MS.gene65429:intron | 45.0% | |
| CAACTTTCTGAGCCAACAAC+CGG | + | chr4.3:87767622-87767641 | MS.gene65429:CDS | 45.0% | |
| CAAGTGCATGATTGGAATGG+CGG | + | chr4.3:87767311-87767330 | MS.gene65429:intron | 45.0% | |
| CACTAATGACAGAGCTGTGT+TGG | + | chr4.3:87768890-87768909 | MS.gene65429:CDS | 45.0% | |
| CACTGCATTTCGGAACAGAT+GGG | + | chr4.3:87768849-87768868 | MS.gene65429:CDS | 45.0% | |
| CCAAAGGAATTACCTGAGCT+AGG | - | chr4.3:87767863-87767882 | None:intergenic | 45.0% | |
| CCAACAACCGGAATTTGTGT+TGG | + | chr4.3:87767634-87767653 | MS.gene65429:CDS | 45.0% | |
| CCAACACAAATTCCGGTTGT+TGG | - | chr4.3:87767637-87767656 | None:intergenic | 45.0% | |
| CCCATGCAATCAAAGGTTTC+AGG | + | chr4.3:87768721-87768740 | MS.gene65429:CDS | 45.0% | |
| CCTAGCTCAGGTAATTCCTT+TGG | + | chr4.3:87767860-87767879 | MS.gene65429:intron | 45.0% | |
| CTATCAGAATCCTCGGACAT+AGG | - | chr4.3:87769272-87769291 | None:intergenic | 45.0% | |
| CTGTCTAGGAAAGAATCAGC+TGG | + | chr4.3:87769194-87769213 | MS.gene65429:CDS | 45.0% | |
| GAAATTACCTCACCTAGCTC+AGG | + | chr4.3:87767848-87767867 | MS.gene65429:CDS | 45.0% | |
| GAAGAAGAGTCCTTCACTGT+TGG | + | chr4.3:87765955-87765974 | MS.gene65429:CDS | 45.0% | |
| GAAGAAGTGAAGGGAAAGCT+GGG | + | chr4.3:87767723-87767742 | MS.gene65429:CDS | 45.0% | |
| GACTGCATGATGTGGAATCA+GGG | + | chr4.3:87767753-87767772 | MS.gene65429:CDS | 45.0% | |
| GCAGTTCCAGTCTCAAAGTA+TGG | - | chr4.3:87767665-87767684 | None:intergenic | 45.0% | |
| GTCTGATATCATGGCTCTCA+AGG | + | chr4.3:87766585-87766604 | MS.gene65429:CDS | 45.0% | |
| TAATGACAGAGCTGTGTTGG+AGG | + | chr4.3:87768893-87768912 | MS.gene65429:CDS | 45.0% | |
| TACAGTTTCACCGACCATTC+AGG | - | chr4.3:87768051-87768070 | None:intergenic | 45.0% | |
| TGGTTGAGATTTGCATGCAC+AGG | + | chr4.3:87768237-87768256 | MS.gene65429:intron | 45.0% | |
| TGTTCATCATCAGAGACAGG+TGG | - | chr4.3:87768954-87768973 | None:intergenic | 45.0% | |
| TTAATCTGCAATCCGGGTGA+GGG | + | chr4.3:87768284-87768303 | MS.gene65429:intron | 45.0% | |
| TTCTTCAGACGCAAACCAAG+TGG | - | chr4.3:87765941-87765960 | None:intergenic | 45.0% | |
| TTGGATGAACCAAGTCCACT+TGG | + | chr4.3:87765923-87765942 | MS.gene65429:CDS | 45.0% | |
| TTGGCTCAGAAAGTTGAGAC+GGG | - | chr4.3:87767618-87767637 | None:intergenic | 45.0% | |
| ! | AACCAAGGAAGCATACCTTG+TGG | + | chr4.3:87767208-87767227 | MS.gene65429:CDS | 45.0% |
| ! | AGTGGACTTGGTTCATCCAA+AGG | - | chr4.3:87765923-87765942 | None:intergenic | 45.0% |
| ! | GAAGGGAAAGCTGGGATTTT+TGG | + | chr4.3:87767731-87767750 | MS.gene65429:CDS | 45.0% |
| ! | GTCTGTTGTTGATTGCCACA+AGG | - | chr4.3:87767226-87767245 | None:intergenic | 45.0% |
| ! | GTTGGCTCAGAAAGTTGAGA+CGG | - | chr4.3:87767619-87767638 | None:intergenic | 45.0% |
| !! | ATTTGTTGTAGCTGGCAAGG+AGG | + | chr4.3:87767157-87767176 | MS.gene65429:intron | 45.0% |
| !!! | ATAAATTTTTTAATTTATTG+TGG | + | chr4.3:87768372-87768391 | MS.gene65429:intron | 5.0% |
| ACAGACCATTTCCTTGCTGC+TGG | - | chr4.3:87769178-87769197 | None:intergenic | 50.0% | |
| CAATGCCCTCAAGGTCTGTT+AGG | + | chr4.3:87767560-87767579 | MS.gene65429:CDS | 50.0% | |
| CACAGGTTCAACGGTTGTAG+AGG | + | chr4.3:87768254-87768273 | MS.gene65429:intron | 50.0% | |
| CACTTTGTGCAATGCCCTCA+AGG | + | chr4.3:87767551-87767570 | MS.gene65429:CDS | 50.0% | |
| CATGATGTGGAATCAGGGTC+TGG | + | chr4.3:87767758-87767777 | MS.gene65429:CDS | 50.0% | |
| CCACATCGGACACTGCATTT+CGG | + | chr4.3:87768839-87768858 | MS.gene65429:CDS | 50.0% | |
| GGAATTACCTGAGCTAGGTG+AGG | - | chr4.3:87767858-87767877 | None:intergenic | 50.0% | |
| GGACTGCATGATGTGGAATC+AGG | + | chr4.3:87767752-87767771 | MS.gene65429:CDS | 50.0% | |
| GGGAGATCAATCCACAACCA+AGG | + | chr4.3:87767193-87767212 | MS.gene65429:CDS | 50.0% | |
| GTGGACAAGCCAGCATACAT+AGG | + | chr4.3:87767253-87767272 | MS.gene65429:CDS | 50.0% | |
| TAAAACTTCCCTCCCTCACC+CGG | - | chr4.3:87768299-87768318 | None:intergenic | 50.0% | |
| TCCTGCACCCGAAGAAAAAC+AGG | + | chr4.3:87769025-87769044 | MS.gene65429:CDS | 50.0% | |
| TCTCAAGGCAAACTACCCTG+AGG | + | chr4.3:87766600-87766619 | MS.gene65429:CDS | 50.0% | |
| TCTTCACCCTTCGATGTCGA+TGG | + | chr4.3:87768803-87768822 | MS.gene65429:CDS | 50.0% | |
| TGAGGATGCTCCAGGAACAT+TGG | + | chr4.3:87766618-87766637 | MS.gene65429:CDS | 50.0% | |
| TGCCACAAGGTATGCTTCCT+TGG | - | chr4.3:87767213-87767232 | None:intergenic | 50.0% | |
| TGCTGCTGATAGCAAGCTCA+AGG | + | chr4.3:87766060-87766079 | MS.gene65429:CDS | 50.0% | |
| TGGCTCAGAAAGTTGAGACG+GGG | - | chr4.3:87767617-87767636 | None:intergenic | 50.0% | |
| TGTGGCAGAGAAGCAATCCT+TGG | - | chr4.3:87769239-87769258 | None:intergenic | 50.0% | |
| ! | AATGTTCCTGGAGCATCCTC+AGG | - | chr4.3:87766619-87766638 | None:intergenic | 50.0% |
| ! | AGACGCAAACCAAGTGGACT+TGG | - | chr4.3:87765935-87765954 | None:intergenic | 50.0% |
| ! | ATGTTCCTGGAGCATCCTCA+GGG | - | chr4.3:87766618-87766637 | None:intergenic | 50.0% |
| ! | CAGGAGGGTCTTTCTGAAGA+AGG | - | chr4.3:87769010-87769029 | None:intergenic | 50.0% |
| ! | GTTTTTCTTCGGGTGCAGGA+GGG | - | chr4.3:87769025-87769044 | None:intergenic | 50.0% |
| ! | TGTTTTTCTTCGGGTGCAGG+AGG | - | chr4.3:87769026-87769045 | None:intergenic | 50.0% |
| !! | AAGGAGGCCCCTGTTTTTCA+GGG | + | chr4.3:87767173-87767192 | MS.gene65429:CDS | 50.0% |
| !! | ACCTGTTTTTCTTCGGGTGC+AGG | - | chr4.3:87769029-87769048 | None:intergenic | 50.0% |
| !! | ATTTGGCTGCACCGGCTATA+TGG | - | chr4.3:87768182-87768201 | None:intergenic | 50.0% |
| !! | CTTGAGGGCATTGCACAAAG+TGG | - | chr4.3:87767553-87767572 | None:intergenic | 50.0% |
| AACCCTCAATGCCGGATCCT+CGG | + | chr4.3:87768153-87768172 | MS.gene65429:intron | 55.0% | |
| AACTACCCTGAGGATGCTCC+AGG | + | chr4.3:87766610-87766629 | MS.gene65429:CDS | 55.0% | |
| ATCCTCGGCAGCCATATAGC+CGG | + | chr4.3:87768168-87768187 | MS.gene65429:intron | 55.0% | |
| CCGAAATGCAGTGTCCGATG+TGG | - | chr4.3:87768842-87768861 | None:intergenic | 55.0% | |
| CTATATGGCTGCCGAGGATC+CGG | - | chr4.3:87768167-87768186 | None:intergenic | 55.0% | |
| GACATCGAAGGGTGAAGACC+AGG | - | chr4.3:87768801-87768820 | None:intergenic | 55.0% | |
| GCCTCCCTAACAGACCTTGA+GGG | - | chr4.3:87767568-87767587 | None:intergenic | 55.0% | |
| GGTAGCCAGCAGCAAGGAAA+TGG | + | chr4.3:87769170-87769189 | MS.gene65429:CDS | 55.0% | |
| TGCCTCCCTAACAGACCTTG+AGG | - | chr4.3:87767569-87767588 | None:intergenic | 55.0% | |
| TGGTCGAGATTTGGCTGCAC+CGG | - | chr4.3:87768190-87768209 | None:intergenic | 55.0% | |
| !! | CAAGGAGGCCCCTGTTTTTC+AGG | + | chr4.3:87767172-87767191 | MS.gene65429:CDS | 55.0% |
| ATCTGCAATCCGGGTGAGGG+AGG | + | chr4.3:87768287-87768306 | MS.gene65429:intron | 60.0% | |
| GCCCTCAAGGTCTGTTAGGG+AGG | + | chr4.3:87767564-87767583 | MS.gene65429:CDS | 60.0% | |
| GCTTCTGGTAGCCAGCAGCA+AGG | + | chr4.3:87769164-87769183 | MS.gene65429:CDS | 60.0% | |
| TCTGCAATCCGGGTGAGGGA+GGG | + | chr4.3:87768288-87768307 | MS.gene65429:intron | 60.0% | |
| ! | TGCCGAGGATCCGGCATTGA+GGG | - | chr4.3:87768158-87768177 | None:intergenic | 60.0% |
| CTGCCGAGGATCCGGCATTG+AGG | - | chr4.3:87768159-87768178 | None:intergenic | 65.0% | |
| ! | CACCGGCTATATGGCTGCCG+AGG | - | chr4.3:87768173-87768192 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 87765505 | 87769304 | 87765505 | ID=MS.gene65429 |
| chr4.3 | mRNA | 87765505 | 87769304 | 87765505 | ID=MS.gene65429.t1;Parent=MS.gene65429 |
| chr4.3 | exon | 87765505 | 87765639 | 87765505 | ID=MS.gene65429.t1.exon1;Parent=MS.gene65429.t1 |
| chr4.3 | CDS | 87765505 | 87765639 | 87765505 | ID=cds.MS.gene65429.t1;Parent=MS.gene65429.t1 |
| chr4.3 | exon | 87765881 | 87766126 | 87765881 | ID=MS.gene65429.t1.exon2;Parent=MS.gene65429.t1 |
| chr4.3 | CDS | 87765881 | 87766126 | 87765881 | ID=cds.MS.gene65429.t1;Parent=MS.gene65429.t1 |
| chr4.3 | exon | 87766475 | 87766648 | 87766475 | ID=MS.gene65429.t1.exon3;Parent=MS.gene65429.t1 |
| chr4.3 | CDS | 87766475 | 87766648 | 87766475 | ID=cds.MS.gene65429.t1;Parent=MS.gene65429.t1 |
| chr4.3 | exon | 87767168 | 87767274 | 87767168 | ID=MS.gene65429.t1.exon4;Parent=MS.gene65429.t1 |
| chr4.3 | CDS | 87767168 | 87767274 | 87767168 | ID=cds.MS.gene65429.t1;Parent=MS.gene65429.t1 |
| chr4.3 | exon | 87767547 | 87767869 | 87767547 | ID=MS.gene65429.t1.exon5;Parent=MS.gene65429.t1 |
| chr4.3 | CDS | 87767547 | 87767869 | 87767547 | ID=cds.MS.gene65429.t1;Parent=MS.gene65429.t1 |
| chr4.3 | exon | 87768712 | 87769304 | 87768712 | ID=MS.gene65429.t1.exon6;Parent=MS.gene65429.t1 |
| chr4.3 | CDS | 87768712 | 87769304 | 87768712 | ID=cds.MS.gene65429.t1;Parent=MS.gene65429.t1 |
| Gene Sequence |
| Protein sequence |
