Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65513.t1 | XP_013467108.1 | 97.7 | 610 | 9 | 2 | 1 | 606 | 1 | 609 | 0.00E+00 | 1161 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65513.t1 | A0A072VGG8 | 97.7 | 610 | 9 | 2 | 1 | 606 | 1 | 609 | 0.0e+00 | 1161.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene053418 | MS.gene65513 | 0.801944 | 7.09E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65513.t1 | MTR_1g044135 | 97.705 | 610 | 9 | 2 | 1 | 606 | 1 | 609 | 0.0 | 1229 |
| MS.gene65513.t1 | MTR_1g073890 | 68.506 | 616 | 147 | 9 | 1 | 606 | 1 | 579 | 0.0 | 831 |
| MS.gene65513.t1 | MTR_3g091180 | 37.175 | 616 | 321 | 16 | 1 | 586 | 1 | 580 | 9.73e-114 | 352 |
| MS.gene65513.t1 | MTR_1g061540 | 33.877 | 552 | 295 | 13 | 39 | 575 | 25 | 521 | 3.14e-77 | 254 |
| MS.gene65513.t1 | MTR_7g103490 | 33.982 | 565 | 297 | 14 | 39 | 577 | 24 | 538 | 2.29e-76 | 253 |
| MS.gene65513.t1 | MTR_0318s0020 | 53.191 | 188 | 84 | 2 | 401 | 586 | 380 | 565 | 1.20e-55 | 198 |
| MS.gene65513.t1 | MTR_0318s0020 | 33.459 | 266 | 150 | 3 | 1 | 245 | 91 | 350 | 1.72e-39 | 153 |
| MS.gene65513.t1 | MTR_1g092540 | 58.929 | 168 | 63 | 3 | 416 | 580 | 414 | 578 | 1.57e-55 | 198 |
| MS.gene65513.t1 | MTR_1g092540 | 34.008 | 247 | 143 | 3 | 1 | 245 | 1 | 229 | 2.46e-41 | 158 |
| MS.gene65513.t1 | MTR_4g021260 | 40.343 | 233 | 122 | 3 | 42 | 257 | 17 | 249 | 3.19e-47 | 173 |
| MS.gene65513.t1 | MTR_4g021260 | 43.836 | 146 | 77 | 3 | 432 | 572 | 330 | 475 | 9.11e-32 | 129 |
| MS.gene65513.t1 | MTR_7g063040 | 40.758 | 211 | 118 | 1 | 42 | 245 | 23 | 233 | 1.25e-46 | 171 |
| MS.gene65513.t1 | MTR_7g063040 | 35.586 | 222 | 110 | 10 | 366 | 578 | 286 | 483 | 1.49e-26 | 114 |
| MS.gene65513.t1 | MTR_6g461910 | 51.479 | 169 | 77 | 4 | 425 | 589 | 343 | 510 | 2.38e-45 | 168 |
| MS.gene65513.t1 | MTR_6g461910 | 41.429 | 210 | 119 | 2 | 40 | 245 | 32 | 241 | 2.79e-42 | 160 |
| MS.gene65513.t1 | MTR_1g096970 | 33.493 | 209 | 129 | 3 | 44 | 245 | 51 | 256 | 1.01e-22 | 102 |
| MS.gene65513.t1 | MTR_1g096970 | 29.054 | 148 | 91 | 2 | 435 | 572 | 269 | 412 | 1.42e-13 | 73.9 |
| MS.gene65513.t1 | MTR_3g097240 | 31.081 | 222 | 141 | 3 | 44 | 263 | 141 | 352 | 8.23e-21 | 95.5 |
| MS.gene65513.t1 | MTR_3g097240 | 31.081 | 222 | 141 | 3 | 44 | 263 | 141 | 352 | 9.89e-21 | 95.9 |
| MS.gene65513.t1 | MTR_3g097240 | 31.081 | 222 | 141 | 3 | 44 | 263 | 141 | 352 | 1.90e-20 | 95.9 |
| MS.gene65513.t1 | MTR_3g097240 | 30.882 | 136 | 77 | 4 | 437 | 561 | 359 | 488 | 8.80e-12 | 68.6 |
| MS.gene65513.t1 | MTR_3g114010 | 31.624 | 234 | 143 | 5 | 44 | 267 | 122 | 348 | 4.74e-20 | 94.7 |
| MS.gene65513.t1 | MTR_3g114010 | 31.646 | 158 | 93 | 3 | 434 | 580 | 340 | 493 | 8.77e-15 | 78.2 |
| MS.gene65513.t1 | MTR_1g025340 | 31.364 | 220 | 131 | 3 | 41 | 248 | 124 | 335 | 5.45e-20 | 94.4 |
| MS.gene65513.t1 | MTR_1g025340 | 29.870 | 154 | 89 | 4 | 434 | 574 | 345 | 492 | 7.31e-12 | 68.6 |
| MS.gene65513.t1 | MTR_8g095080 | 29.665 | 209 | 137 | 2 | 44 | 245 | 150 | 355 | 8.25e-14 | 74.3 |
| MS.gene65513.t1 | MTR_8g095080 | 29.665 | 209 | 137 | 2 | 44 | 245 | 150 | 355 | 2.91e-13 | 73.2 |
| MS.gene65513.t1 | MTR_8g095080 | 29.104 | 134 | 82 | 3 | 437 | 561 | 373 | 502 | 1.36e-11 | 67.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65513.t1 | AT3G23160 | 58.128 | 609 | 174 | 10 | 1 | 606 | 1 | 531 | 0.0 | 676 |
| MS.gene65513.t1 | AT5G04550 | 35.342 | 614 | 317 | 13 | 30 | 595 | 15 | 596 | 2.68e-108 | 338 |
| MS.gene65513.t1 | AT5G04550 | 35.342 | 614 | 317 | 13 | 30 | 595 | 15 | 596 | 2.68e-108 | 338 |
| MS.gene65513.t1 | AT5G51670 | 49.425 | 174 | 82 | 2 | 411 | 580 | 289 | 460 | 1.07e-47 | 174 |
| MS.gene65513.t1 | AT5G51670 | 31.179 | 263 | 158 | 3 | 1 | 248 | 1 | 255 | 5.67e-33 | 132 |
| MS.gene65513.t1 | AT5G51670 | 49.425 | 174 | 82 | 2 | 411 | 580 | 289 | 460 | 1.07e-47 | 174 |
| MS.gene65513.t1 | AT5G51670 | 31.179 | 263 | 158 | 3 | 1 | 248 | 1 | 255 | 5.67e-33 | 132 |
| MS.gene65513.t1 | AT1G34320 | 32.701 | 211 | 130 | 4 | 44 | 245 | 155 | 362 | 2.81e-22 | 102 |
| MS.gene65513.t1 | AT1G34320 | 31.579 | 152 | 88 | 4 | 433 | 572 | 373 | 520 | 1.90e-14 | 77.0 |
| MS.gene65513.t1 | AT1G34320 | 32.701 | 211 | 130 | 4 | 44 | 245 | 155 | 362 | 2.81e-22 | 102 |
| MS.gene65513.t1 | AT1G34320 | 31.579 | 152 | 88 | 4 | 433 | 572 | 373 | 520 | 1.90e-14 | 77.0 |
| MS.gene65513.t1 | AT1G30755 | 29.167 | 216 | 143 | 2 | 44 | 252 | 134 | 346 | 1.36e-17 | 86.3 |
| MS.gene65513.t1 | AT1G30755 | 29.167 | 216 | 143 | 2 | 44 | 252 | 134 | 346 | 1.80e-17 | 85.9 |
| MS.gene65513.t1 | AT1G30755 | 29.167 | 216 | 143 | 2 | 44 | 252 | 134 | 346 | 1.80e-17 | 85.9 |
| MS.gene65513.t1 | AT1G30755 | 29.167 | 216 | 143 | 2 | 44 | 252 | 134 | 346 | 1.91e-17 | 86.7 |
| MS.gene65513.t1 | AT1G30755 | 29.167 | 216 | 143 | 2 | 44 | 252 | 134 | 346 | 1.91e-17 | 86.7 |
| MS.gene65513.t1 | AT1G30755 | 29.167 | 216 | 143 | 2 | 44 | 252 | 134 | 346 | 1.91e-17 | 86.7 |
| MS.gene65513.t1 | AT5G08660 | 34.434 | 212 | 123 | 4 | 44 | 245 | 149 | 354 | 1.80e-14 | 77.0 |
| MS.gene65513.t1 | AT5G08660 | 31.973 | 147 | 83 | 4 | 437 | 572 | 372 | 512 | 8.46e-14 | 75.1 |
| MS.gene65513.t1 | AT5G08660 | 34.434 | 212 | 123 | 4 | 44 | 245 | 149 | 354 | 1.80e-14 | 77.0 |
| MS.gene65513.t1 | AT5G08660 | 31.973 | 147 | 83 | 4 | 437 | 572 | 372 | 512 | 8.46e-14 | 75.1 |
| MS.gene65513.t1 | AT5G08660 | 34.434 | 212 | 123 | 4 | 44 | 245 | 149 | 354 | 1.80e-14 | 77.0 |
| MS.gene65513.t1 | AT5G08660 | 31.973 | 147 | 83 | 4 | 437 | 572 | 372 | 512 | 8.46e-14 | 75.1 |
| MS.gene65513.t1 | AT5G08660 | 34.434 | 212 | 123 | 4 | 44 | 245 | 149 | 354 | 1.95e-14 | 76.6 |
Find 0 sgRNAs with CRISPR-Local
Find 132 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTTTGATTTTGAAGATTGTA+TGG | + | 11211:10144-10163 | MS.gene65513:CDS | 20.0% |
| ! | ACAGAGAATAAAGAAACTAT+AGG | + | 11211:8495-8514 | MS.gene65513:CDS | 25.0% |
| ! | ATTGGAAAGAAAATCTTGAT+GGG | + | 11211:9894-9913 | MS.gene65513:CDS | 25.0% |
| ! | TATGAGTTTGTATAGTGAAT+TGG | + | 11211:8881-8900 | MS.gene65513:CDS | 25.0% |
| !! | AAGATTTTCTTTCCAATCAT+GGG | - | 11211:9891-9910 | MS.gene65513:intergenic | 25.0% |
| !!! | AATGAATGTGGATTTTTTTC+TGG | + | 11211:9170-9189 | MS.gene65513:CDS | 25.0% |
| AAAACTATTGTTCCTCAAAG+CGG | - | 11211:9126-9145 | MS.gene65512:intergenic | 30.0% | |
| AGAAGCTTGGATTGTAAAAA+TGG | + | 11211:8392-8411 | MS.gene65513:CDS | 30.0% | |
| ATATGTAATTCAACCCAACA+AGG | - | 11211:10078-10097 | MS.gene65513:intergenic | 30.0% | |
| ATTTGAAGGATGTTTCTCTT+TGG | + | 11211:9015-9034 | MS.gene65513:CDS | 30.0% | |
| CATGTTTATAGTGACATTGT+TGG | + | 11211:8771-8790 | MS.gene65513:CDS | 30.0% | |
| CTCTATGACAATTATGACAT+TGG | - | 11211:9726-9745 | MS.gene65513:intergenic | 30.0% | |
| GAAGCTTGGATTGTAAAAAT+GGG | + | 11211:8393-8412 | MS.gene65513:CDS | 30.0% | |
| GAAGTTGTATGTCAAGAATT+TGG | + | 11211:9844-9863 | MS.gene65513:CDS | 30.0% | |
| GATTGGAAAGAAAATCTTGA+TGG | + | 11211:9893-9912 | MS.gene65513:CDS | 30.0% | |
| GTTTCAGATTTGAACTTACT+TGG | - | 11211:8422-8441 | MS.gene65513:intergenic | 30.0% | |
| TTATTGATGTGAAGGAGTTA+GGG | + | 11211:8799-8818 | MS.gene65513:CDS | 30.0% | |
| TTGCACATAATATGATGAGA+TGG | + | 11211:9939-9958 | MS.gene65513:CDS | 30.0% | |
| TTGGAATCAGACATTTGATA+AGG | + | 11211:9034-9053 | MS.gene65513:CDS | 30.0% | |
| ! | AATTTGGTTTCATCTGATGA+AGG | + | 11211:8636-8655 | MS.gene65513:CDS | 30.0% |
| ! | CAAGATTTTCTTTCCAATCA+TGG | - | 11211:9892-9911 | MS.gene65513:intergenic | 30.0% |
| ! | CTTTTGAGCAGAAACTTTTA+TGG | + | 11211:8973-8992 | MS.gene65513:CDS | 30.0% |
| !! | ATTTTGAAGATTGTATGGAG+TGG | + | 11211:10149-10168 | MS.gene65513:CDS | 30.0% |
| !!! | TTTTTGGTTAAGCATATGGA+AGG | + | 11211:8822-8841 | MS.gene65513:CDS | 30.0% |
| AAAATCTTGATGGGATGCTT+CGG | + | 11211:9903-9922 | MS.gene65513:CDS | 35.0% | |
| AATGAGATCTTGAACACTGA+AGG | + | 11211:8606-8625 | MS.gene65513:CDS | 35.0% | |
| ACAACAGCAAAATGCATTGT+TGG | + | 11211:10108-10127 | MS.gene65513:CDS | 35.0% | |
| ATTAGTGTTCAGACGAATTC+AGG | + | 11211:9197-9216 | MS.gene65513:CDS | 35.0% | |
| CTCATCATATTATGTGCAAG+AGG | - | 11211:9938-9957 | MS.gene65513:intergenic | 35.0% | |
| GAACTAAGACAAGCTAAATC+CGG | + | 11211:9605-9624 | MS.gene65513:CDS | 35.0% | |
| GAGTTTGTATAGTGAATTGG+AGG | + | 11211:8884-8903 | MS.gene65513:CDS | 35.0% | |
| GCTAGAATTTCTGTGATCTT+CGG | + | 11211:9095-9114 | MS.gene65513:CDS | 35.0% | |
| GTTATTGATGTGAAGGAGTT+AGG | + | 11211:8798-8817 | MS.gene65513:CDS | 35.0% | |
| GTTTATAGTGACATTGTTGG+TGG | + | 11211:8774-8793 | MS.gene65513:CDS | 35.0% | |
| GTTTCAGAATAATCAGCATG+TGG | + | 11211:8938-8957 | MS.gene65513:CDS | 35.0% | |
| TAGAAACAACACTAGCAACA+CGG | - | 11211:8707-8726 | MS.gene65513:intergenic | 35.0% | |
| TTAGTGTTCAGACGAATTCA+GGG | + | 11211:9198-9217 | MS.gene65513:CDS | 35.0% | |
| ! | CCACATTCATTTTGCATAAC+CGG | - | 11211:9161-9180 | MS.gene65513:intergenic | 35.0% |
| ! | TGATAAGGTTGTTGAGTTGT+TGG | + | 11211:9049-9068 | MS.gene65513:CDS | 35.0% |
| !! | CACTGAAGGTGTTAAGAATT+TGG | + | 11211:8620-8639 | MS.gene65513:CDS | 35.0% |
| !! | TAAACGGCTAACCTACTTTT+CGG | - | 11211:9656-9675 | MS.gene65513:intergenic | 35.0% |
| !! | TTATCTTCTTGAGCTTGCTA+TGG | + | 11211:8659-8678 | MS.gene65513:CDS | 35.0% |
| !! | TTTAGCTTGTCTTAGTTCTC+CGG | - | 11211:9603-9622 | MS.gene65513:intergenic | 35.0% |
| !!! | AGGGTTTTTGGTTAAGCATA+TGG | + | 11211:8818-8837 | MS.gene65513:CDS | 35.0% |
| !!! | GCTTTGAGGAACAATAGTTT+TGG | + | 11211:9125-9144 | MS.gene65513:CDS | 35.0% |
| !!! | TTGAGGAACAATAGTTTTGG+TGG | + | 11211:9128-9147 | MS.gene65513:CDS | 35.0% |
| AAGCCTAAGGTTATCTCTCA+AGG | + | 11211:9814-9833 | MS.gene65513:CDS | 40.0% | |
| AGAGATAACCTTAGGCTTGT+TGG | - | 11211:9812-9831 | MS.gene65513:intergenic | 40.0% | |
| ATGGAGTGGCAATTACAATG+TGG | + | 11211:10163-10182 | MS.gene65513:CDS | 40.0% | |
| CAACGTTTAGTCCGAAAAGT+AGG | + | 11211:9642-9661 | MS.gene65513:CDS | 40.0% | |
| CAAGGAAAACCAAAATCCTC+AGG | - | 11211:9362-9381 | MS.gene65513:intergenic | 40.0% | |
| CATCTGATATAGATCATCCC+TGG | - | 11211:9786-9805 | MS.gene65513:intergenic | 40.0% | |
| CATTTGTCCTGCTAACTATC+TGG | - | 11211:9991-10010 | MS.gene65513:intergenic | 40.0% | |
| CCGGTTATGCAAAATGAATG+TGG | + | 11211:9158-9177 | MS.gene65513:CDS | 40.0% | |
| CGGTTATGTTATCAATCACG+AGG | + | 11211:9460-9479 | MS.gene65513:CDS | 40.0% | |
| CTTCGCTATCCTCATTTAGT+TGG | + | 11211:9752-9771 | MS.gene65513:CDS | 40.0% | |
| GAATGGTGAGGAAAATGGAT+AGG | + | 11211:8844-8863 | MS.gene65513:CDS | 40.0% | |
| GCAAGATGTGAGACATTTGA+AGG | + | 11211:9001-9020 | MS.gene65513:CDS | 40.0% | |
| GGTTAAGCATATGGAAGGAA+TGG | + | 11211:8827-8846 | MS.gene65513:CDS | 40.0% | |
| GTCCTAAGTCATGTTCAAAG+TGG | + | 11211:9566-9585 | MS.gene65513:CDS | 40.0% | |
| TGAGATCCATTTCTCTTGCT+TGG | - | 11211:9239-9258 | MS.gene65513:intergenic | 40.0% | |
| TGCGAATAGTAGCGTGAAAA+GGG | + | 11211:9523-9542 | MS.gene65513:CDS | 40.0% | |
| TTGCGAATAGTAGCGTGAAA+AGG | + | 11211:9522-9541 | MS.gene65513:CDS | 40.0% | |
| ! | AGCAGAAACTTTTATGGCAG+AGG | + | 11211:8979-8998 | MS.gene65513:CDS | 40.0% |
| ! | GTGGTGAATTAGCTTCTCTT+CGG | + | 11211:9336-9355 | MS.gene65513:CDS | 40.0% |
| ! | TGTGAAGGAGTTAGGGTTTT+TGG | + | 11211:8806-8825 | MS.gene65513:CDS | 40.0% |
| ! | TGTTGAAGGAGGAGCATAAA+CGG | - | 11211:9672-9691 | MS.gene65513:intergenic | 40.0% |
| ! | TTTCAGAGTCTGAGATCTCA+AGG | + | 11211:8577-8596 | MS.gene65513:CDS | 40.0% |
| ! | TTTTCCTTGTGGAACAAGTC+CGG | + | 11211:9373-9392 | MS.gene65513:CDS | 40.0% |
| !! | AGATTTGATGATGTCGACGA+CGG | + | 11211:9440-9459 | MS.gene65513:CDS | 40.0% |
| !! | ATTGGAGGTGTTGAATGAGT+TGG | + | 11211:8899-8918 | MS.gene65513:CDS | 40.0% |
| !! | GCTAGTGTTGTTTCTAGGTT+AGG | + | 11211:8711-8730 | MS.gene65513:CDS | 40.0% |
| !! | GTGTTGCTAGTGTTGTTTCT+AGG | + | 11211:8706-8725 | MS.gene65513:CDS | 40.0% |
| !! | TGGTGGTGTTATTGATGTGA+AGG | + | 11211:8791-8810 | MS.gene65513:CDS | 40.0% |
| !!! | AGGAACAATAGTTTTGGTGG+TGG | + | 11211:9131-9150 | MS.gene65513:CDS | 40.0% |
| !!! | GAGGATTTTGGTTTTCCTTG+TGG | + | 11211:9362-9381 | MS.gene65513:CDS | 40.0% |
| AAGAGAAATGGATCTCAGCC+GGG | + | 11211:9242-9261 | MS.gene65513:CDS | 45.0% | |
| AGATGCTACCAACAAGCCTA+AGG | + | 11211:9801-9820 | MS.gene65513:CDS | 45.0% | |
| AGCATATGGAAGGAATGGTG+AGG | + | 11211:8832-8851 | MS.gene65513:CDS | 45.0% | |
| CAAAGTGGCGTTTCGTTTAC+CGG | + | 11211:9581-9600 | MS.gene65513:CDS | 45.0% | |
| CAAGAGAAATGGATCTCAGC+CGG | + | 11211:9241-9260 | MS.gene65513:CDS | 45.0% | |
| CACTCCATAAAAAGTCTCCC+CGG | - | 11211:9395-9414 | MS.gene65513:intergenic | 45.0% | |
| CATGACTTAGGACACCTGAA+TGG | - | 11211:9559-9578 | MS.gene65513:intergenic | 45.0% | |
| CGATTTGCGATCTCCTTGTT+GGG | + | 11211:10062-10081 | MS.gene65513:CDS | 45.0% | |
| CGCAATCCAAGCAAGAGAAA+TGG | + | 11211:9230-9249 | MS.gene65513:CDS | 45.0% | |
| CTATCCTCATTTAGTTGGCG+AGG | + | 11211:9757-9776 | MS.gene65513:CDS | 45.0% | |
| CTTTCCAATCATGGGCAAGA+GGG | - | 11211:9883-9902 | MS.gene65513:intergenic | 45.0% | |
| GGAAGGAATGGTGAGGAAAA+TGG | + | 11211:8839-8858 | MS.gene65513:CDS | 45.0% | |
| TATGCTCCTCCTTCAACACT+TGG | + | 11211:9674-9693 | MS.gene65513:CDS | 45.0% | |
| TCGCCTTGAGAGATAACCTT+AGG | - | 11211:9820-9839 | MS.gene65513:intergenic | 45.0% | |
| TCTTTCCAATCATGGGCAAG+AGG | - | 11211:9884-9903 | MS.gene65513:intergenic | 45.0% | |
| TGCTCAAACCCTTGTAAAGC+AGG | - | 11211:8753-8772 | MS.gene65513:intergenic | 45.0% | |
| TTTCCAATCATGGGCAAGAG+GGG | - | 11211:9882-9901 | MS.gene65513:intergenic | 45.0% | |
| TTTCCTTGTGGAACAAGTCC+GGG | + | 11211:9374-9393 | MS.gene65513:CDS | 45.0% | |
| ! | AAGTCCGGGGAGACTTTTTA+TGG | + | 11211:9388-9407 | MS.gene65513:CDS | 45.0% |
| ! | AGGTTGTTGAGTTGTTGGCT+AGG | + | 11211:9054-9073 | MS.gene65513:CDS | 45.0% |
| ! | CGCCACTTTGAACATGACTT+AGG | - | 11211:9571-9590 | MS.gene65513:intergenic | 45.0% |
| ! | GTTCTGAGCCTGCTTTACAA+GGG | + | 11211:8742-8761 | MS.gene65513:CDS | 45.0% |
| ! | TCGATTTGCGATCTCCTTGT+TGG | + | 11211:10061-10080 | MS.gene65513:CDS | 45.0% |
| ! | TGTTCTGAGCCTGCTTTACA+AGG | + | 11211:8741-8760 | MS.gene65513:CDS | 45.0% |
| !! | AGGGAGCATTTGTTCCATTC+AGG | + | 11211:9542-9561 | MS.gene65513:CDS | 45.0% |
| AATGCCTGCAGTGCAGAGAA+GGG | + | 11211:9277-9296 | MS.gene65513:CDS | 50.0% | |
| AGCAGCACCAGATAGTTAGC+AGG | + | 11211:9981-10000 | MS.gene65513:CDS | 50.0% | |
| ATCTTGATGGGATGCTTCGG+TGG | + | 11211:9906-9925 | MS.gene65513:CDS | 50.0% | |
| ATTTAGTTGGCGAGGAAGCC+AGG | + | 11211:9765-9784 | MS.gene65513:CDS | 50.0% | |
| CATGTATCTAGCAGTCGCAG+TGG | + | 11211:9494-9513 | MS.gene65513:CDS | 50.0% | |
| CCACTTCTCATGTCAATCCG+AGG | - | 11211:9320-9339 | MS.gene65513:intergenic | 50.0% | |
| CCTCGGATTGACATGAGAAG+TGG | + | 11211:9317-9336 | MS.gene65513:CDS | 50.0% | |
| CGTTGAGCAACTTTGTACGC+CGG | - | 11211:9627-9646 | MS.gene65513:intergenic | 50.0% | |
| GCTTCCTCGCCAACTAAATG+AGG | - | 11211:9764-9783 | MS.gene65513:intergenic | 50.0% | |
| GGCATTCTTGCAACTGAACC+CGG | - | 11211:9263-9282 | MS.gene65513:intergenic | 50.0% | |
| TCTTCGGTGAAACCGCTTTG+AGG | + | 11211:9111-9130 | MS.gene65513:CDS | 50.0% | |
| TTCCTTGTGGAACAAGTCCG+GGG | + | 11211:9375-9394 | MS.gene65513:CDS | 50.0% | |
| TTTAGTTGGCGAGGAAGCCA+GGG | + | 11211:9766-9785 | MS.gene65513:CDS | 50.0% | |
| ! | ATTAGCTTCTCTTCGGCCTG+AGG | + | 11211:9343-9362 | MS.gene65513:CDS | 50.0% |
| ! | GAGATCGCAAATCGACTCCT+CGG | - | 11211:10056-10075 | MS.gene65513:intergenic | 50.0% |
| ! | TCTCTTCGGCCTGAGGATTT+TGG | + | 11211:9350-9369 | MS.gene65513:CDS | 50.0% |
| !!! | TAGTTTTGGTGGTGGTTCGC+CGG | + | 11211:9139-9158 | MS.gene65513:CDS | 50.0% |
| ATGCCTGCAGTGCAGAGAAG+GGG | + | 11211:9278-9297 | MS.gene65513:CDS | 55.0% | |
| GAATGCCTGCAGTGCAGAGA+AGG | + | 11211:9276-9295 | MS.gene65513:CDS | 55.0% | |
| GAGGAGCTGCTAGTAAGCCT+CGG | + | 11211:9300-9319 | MS.gene65513:CDS | 55.0% | |
| GCTCCTCCTTCAACACTTGG+TGG | + | 11211:9677-9696 | MS.gene65513:CDS | 55.0% | |
| TCGACTCCTCGGTCTTCTCA+CGG | - | 11211:10045-10064 | MS.gene65513:intergenic | 55.0% | |
| !! | GAGCCACCAAGTGTTGAAGG+AGG | - | 11211:9683-9702 | MS.gene65513:intergenic | 55.0% |
| !! | GCTGAGCCACCAAGTGTTGA+AGG | - | 11211:9686-9705 | MS.gene65513:intergenic | 55.0% |
| !! | GGCAAGAGGGGCGTCATATA+TGG | - | 11211:9870-9889 | MS.gene65513:intergenic | 55.0% |
| ACGCCCCTCTTGCCCATGAT+TGG | + | 11211:9876-9895 | MS.gene65513:CDS | 60.0% | |
| CTCCTCGGTCTTCTCACGGT+CGG | - | 11211:10041-10060 | MS.gene65513:intergenic | 60.0% | |
| ! | CTCCCCGGACTTGTTCCACA+AGG | - | 11211:9380-9399 | MS.gene65513:intergenic | 60.0% |
| CCTCCCCTTCTCTGCACTGC+AGG | - | 11211:9284-9303 | MS.gene65513:intergenic | 65.0% | |
| CCTGCAGTGCAGAGAAGGGG+AGG | + | 11211:9281-9300 | MS.gene65513:CDS | 65.0% | |
| CGCCGACCGTGAGAAGACCG+AGG | + | 11211:10036-10055 | MS.gene65513:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| 11211 | gene | 8384 | 10204 | 8384 | ID=MS.gene65513 |
| 11211 | mRNA | 8384 | 10204 | 8384 | ID=MS.gene65513.t1;Parent=MS.gene65513 |
| 11211 | exon | 8384 | 10204 | 8384 | ID=MS.gene65513.t1.exon1;Parent=MS.gene65513.t1 |
| 11211 | CDS | 8384 | 10204 | 8384 | ID=cds.MS.gene65513.t1;Parent=MS.gene65513.t1 |
| Gene Sequence |
| Protein sequence |
