Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65562.t1 | XP_013446004.1 | 98.1 | 414 | 7 | 1 | 1 | 413 | 1 | 414 | 4.00E-233 | 817 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65562.t1 | Q0J035 | 63.7 | 391 | 137 | 4 | 14 | 400 | 77 | 466 | 1.5e-140 | 500.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65562.t1 | A0A072TS59 | 98.1 | 414 | 7 | 1 | 1 | 413 | 1 | 414 | 2.9e-233 | 817.0 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051538 | MS.gene65562 | 0.803006 | 4.28E-49 | -1.69E-46 |
| MS.gene058095 | MS.gene65562 | 0.821875 | 3.20E-53 | -1.69E-46 |
| MS.gene060522 | MS.gene65562 | 0.809044 | 2.30E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65562.t1 | MTR_8g064850 | 98.068 | 414 | 7 | 1 | 1 | 413 | 1 | 414 | 0.0 | 837 |
| MS.gene65562.t1 | MTR_8g064850 | 98.529 | 340 | 4 | 1 | 1 | 339 | 1 | 340 | 0.0 | 693 |
| MS.gene65562.t1 | MTR_3g077740 | 60.482 | 415 | 143 | 5 | 1 | 400 | 45 | 453 | 9.49e-171 | 501 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene65562.t1 | AT4G32180 | 59.434 | 424 | 145 | 8 | 1 | 406 | 50 | 464 | 1.97e-167 | 489 |
| MS.gene65562.t1 | AT4G32180 | 59.434 | 424 | 145 | 8 | 1 | 406 | 50 | 464 | 1.97e-167 | 489 |
| MS.gene65562.t1 | AT4G32180 | 59.434 | 424 | 145 | 8 | 1 | 406 | 50 | 464 | 7.80e-166 | 488 |
| MS.gene65562.t1 | AT1G60440 | 62.755 | 392 | 131 | 2 | 19 | 410 | 4 | 380 | 3.47e-159 | 454 |
| MS.gene65562.t1 | AT1G60440 | 69.595 | 296 | 90 | 0 | 115 | 410 | 8 | 303 | 3.12e-134 | 387 |
| MS.gene65562.t1 | AT1G60440 | 55.867 | 392 | 119 | 3 | 19 | 410 | 4 | 341 | 2.68e-131 | 381 |
Find 93 sgRNAs with CRISPR-Local
Find 313 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTATAGGTGGAGGCACTTTC+TGG | 0.182686 | 8.2:+36894734 | MS.gene65562:CDS |
| TACTTAAATGCCCTTCGTTT+TGG | 0.195161 | 8.2:+36896177 | MS.gene65562:CDS |
| GATTTCTCTGAAGTATTTCT+AGG | 0.205074 | 8.2:-36893308 | None:intergenic |
| CCATATCTTCTTGTTAATAT+TGG | 0.206082 | 8.2:+36894546 | MS.gene65562:CDS |
| TATCTGTTGCTGTTAATTTC+TGG | 0.211148 | 8.2:+36896262 | MS.gene65562:CDS |
| ACATGGCCTCAAAGAATTAT+TGG | 0.223498 | 8.2:+36897028 | MS.gene65562:CDS |
| ATGCTTGTTGGAGATATTTA+TGG | 0.256875 | 8.2:+36894938 | MS.gene65562:CDS |
| GTTGCTGGAATTAAGTTATC+AGG | 0.258626 | 8.2:+36894895 | MS.gene65562:CDS |
| ATAGATATTGGTTGACTTCC+GGG | 0.270706 | 8.2:-36893628 | None:intergenic |
| TTAATTACCTTAATAGATAT+TGG | 0.275525 | 8.2:-36893640 | None:intergenic |
| AAAGGCAATGTCTGATAAAA+AGG | 0.281844 | 8.2:+36895155 | MS.gene65562:CDS |
| AGAATGATTTCAAATAATAT+TGG | 0.285867 | 8.2:+36895222 | MS.gene65562:CDS |
| GGAGGCACTTTCTGGGGTTT+AGG | 0.287312 | 8.2:+36894742 | MS.gene65562:CDS |
| CTTCAGCTTTGATGAGTTGC+TGG | 0.304425 | 8.2:+36894880 | MS.gene65562:intron |
| TATCATCTTGCTCTGGATAT+TGG | 0.311937 | 8.2:+36891833 | MS.gene65562:CDS |
| AGGAACCATCCTGTTCTTAA+AGG | 0.312390 | 8.2:+36893341 | MS.gene65562:CDS |
| AAGTCAACCAATATCTATTA+AGG | 0.312782 | 8.2:+36893633 | MS.gene65562:CDS |
| GATAGTGTATCCATTGTAAA+AGG | 0.314727 | 8.2:-36896243 | None:intergenic |
| AATAGATATTGGTTGACTTC+CGG | 0.321055 | 8.2:-36893629 | None:intergenic |
| TTGCGGCATGAAGGATTTCT+TGG | 0.322380 | 8.2:+36896975 | MS.gene65562:CDS |
| CCGAGAAGCCTATACCTATA+TGG | 0.323228 | 8.2:+36894479 | MS.gene65562:CDS |
| ACATGAGTTGTTGATGGATT+AGG | 0.328971 | 8.2:-36891809 | None:intergenic |
| GATGGATTAGGATCGGAATT+TGG | 0.330679 | 8.2:-36891797 | None:intergenic |
| TATCCCTAGCCTTTCTTTGA+AGG | 0.348131 | 8.2:-36894110 | None:intergenic |
| ACTGCAATAGCATCTAGTTT+TGG | 0.351488 | 8.2:+36895132 | MS.gene65562:CDS |
| TTGATCACCCATATAGGTAT+AGG | 0.360507 | 8.2:-36894487 | None:intergenic |
| CCAATATTAACAAGAAGATA+TGG | 0.371904 | 8.2:-36894546 | None:intergenic |
| TAACTTGGTCGGACTTTGTT+GGG | 0.379531 | 8.2:-36897063 | None:intergenic |
| CCATATAGGTATAGGCTTCT+CGG | 0.381859 | 8.2:-36894479 | None:intergenic |
| TTGAGCTTTCCTTTAAGAAC+AGG | 0.385427 | 8.2:-36893350 | None:intergenic |
| CTTCTTGTTAATATTGGATC+TGG | 0.386128 | 8.2:+36894552 | MS.gene65562:CDS |
| TTGCCTTTGATCACCCATAT+AGG | 0.387321 | 8.2:-36894493 | None:intergenic |
| TATAGGTGGAGGCACTTTCT+GGG | 0.396912 | 8.2:+36894735 | MS.gene65562:CDS |
| GGAAAGTTTGAGCGAGTTAG+TGG | 0.402390 | 8.2:+36894706 | MS.gene65562:CDS |
| TCTTGACAAGGAAGATGAAA+TGG | 0.404418 | 8.2:+36894135 | MS.gene65562:CDS |
| GCTTAACCAATAATTCTTTG+AGG | 0.414453 | 8.2:-36897034 | None:intergenic |
| TTCATATAGGTGGAAGGAAA+TGG | 0.417291 | 8.2:+36894685 | MS.gene65562:intron |
| TGATAAACATGAGTTGTTGA+TGG | 0.420275 | 8.2:-36891815 | None:intergenic |
| ATCCCTAGCCTTTCTTTGAA+GGG | 0.426273 | 8.2:-36894109 | None:intergenic |
| AGATTACAGACCCGAAGATA+TGG | 0.429533 | 8.2:+36895185 | MS.gene65562:CDS |
| CAACTAGATGGTGAATTGTT+TGG | 0.453366 | 8.2:+36897113 | MS.gene65562:CDS |
| GAAATGGATTGTCTTGTTGC+AGG | 0.461214 | 8.2:+36894151 | MS.gene65562:CDS |
| ATCAACAGCGAAAGTTAACT+TGG | 0.461877 | 8.2:-36897078 | None:intergenic |
| AAGAGATCGAGCCATATCTT+CGG | 0.465688 | 8.2:-36895196 | None:intergenic |
| CGAGTTAGTGGAACGAGTAT+AGG | 0.467173 | 8.2:+36894718 | MS.gene65562:CDS |
| ACCTCCAGGATGAAGTTTCA+TGG | 0.470308 | 8.2:-36893426 | None:intergenic |
| AAAGAGGTAGATATGCTTGT+TGG | 0.472282 | 8.2:+36894926 | MS.gene65562:CDS |
| TTAACTTGGTCGGACTTTGT+TGG | 0.484620 | 8.2:-36897064 | None:intergenic |
| ATGCAGACCCCTTCAAAGAA+AGG | 0.486872 | 8.2:+36894101 | MS.gene65562:CDS |
| CGAGAAGCCTATACCTATAT+GGG | 0.487207 | 8.2:+36894480 | MS.gene65562:CDS |
| AGAGATCGAGCCATATCTTC+GGG | 0.493566 | 8.2:-36895195 | None:intergenic |
| TCATGTTTATCATCTTGCTC+TGG | 0.495066 | 8.2:+36891826 | MS.gene65562:CDS |
| TCCCTAGCCTTTCTTTGAAG+GGG | 0.495185 | 8.2:-36894108 | None:intergenic |
| ACCATTGTTGTGAAGGCCAC+AGG | 0.503696 | 8.2:+36894061 | MS.gene65562:intron |
| AATACTTCAGAGAAATCAAA+AGG | 0.505429 | 8.2:+36893314 | MS.gene65562:CDS |
| AGAATTATTGGTTAAGCAAG+AGG | 0.511175 | 8.2:+36897040 | MS.gene65562:CDS |
| CATCTTGCTCTGGATATTGG+AGG | 0.516601 | 8.2:+36891836 | MS.gene65562:CDS |
| GAAGGATTTCTTGGAGCTGT+AGG | 0.521139 | 8.2:+36896984 | MS.gene65562:CDS |
| GATTTCAAATAATATTGGAC+AGG | 0.523645 | 8.2:+36895227 | MS.gene65562:CDS |
| ATAGGTGGAGGCACTTTCTG+GGG | 0.526740 | 8.2:+36894736 | MS.gene65562:CDS |
| GTTGTGAAGGCCACAGGTGG+TGG | 0.533246 | 8.2:+36894067 | MS.gene65562:intron |
| GCAATGTTCTTGCGGCATGA+AGG | 0.537851 | 8.2:+36896966 | MS.gene65562:CDS |
| AAGATGCATGGTCAACTAGA+TGG | 0.539599 | 8.2:+36897101 | MS.gene65562:CDS |
| TGGAGATATTTATGGTGGAA+TGG | 0.541952 | 8.2:+36894946 | MS.gene65562:CDS |
| CTTGTTGGAGATATTTATGG+TGG | 0.542501 | 8.2:+36894941 | MS.gene65562:CDS |
| TTTCAATTCATATAGGTGGA+AGG | 0.547834 | 8.2:+36894679 | MS.gene65562:intron |
| ATCTGGTGTTAGCATGATCA+AGG | 0.553570 | 8.2:+36894569 | MS.gene65562:CDS |
| ACCCCTTCAAAGAAAGGCTA+GGG | 0.559074 | 8.2:+36894107 | MS.gene65562:CDS |
| TTCGCTGTTGATAAGATGCA+TGG | 0.566331 | 8.2:+36897089 | MS.gene65562:CDS |
| TTGCTGGAATTAAGTTATCA+GGG | 0.566970 | 8.2:+36894896 | MS.gene65562:CDS |
| AGTTGTTGATGGATTAGGAT+CGG | 0.569966 | 8.2:-36891804 | None:intergenic |
| TCCTCTTCAGCCCAAAACGA+AGG | 0.571979 | 8.2:-36896188 | None:intergenic |
| AAGACCATGAAACTTCATCC+TGG | 0.584192 | 8.2:+36893422 | MS.gene65562:CDS |
| GACCCCTTCAAAGAAAGGCT+AGG | 0.589090 | 8.2:+36894106 | MS.gene65562:CDS |
| CAGAGAAATCAAAAGGCAGA+AGG | 0.591700 | 8.2:+36893321 | MS.gene65562:CDS |
| AGTCGGCAGCAAGAAAATCC+CGG | 0.600104 | 8.2:+36893610 | MS.gene65562:CDS |
| TGGTGATGAATTCAGGTAGT+CGG | 0.600307 | 8.2:+36893593 | MS.gene65562:intron |
| ATACCTATATGGGTGATCAA+AGG | 0.601771 | 8.2:+36894490 | MS.gene65562:CDS |
| CCTCTTCAGCCCAAAACGAA+GGG | 0.612270 | 8.2:-36896187 | None:intergenic |
| GTTAGTGGAACGAGTATAGG+TGG | 0.612326 | 8.2:+36894721 | MS.gene65562:CDS |
| ATGTTTATCAGAACTCATGA+AGG | 0.615934 | 8.2:-36897009 | None:intergenic |
| AGGCGAAAGCAATGTTCTTG+CGG | 0.618547 | 8.2:+36896958 | MS.gene65562:CDS |
| ACAGCGAAAGTTAACTTGGT+CGG | 0.621202 | 8.2:-36897074 | None:intergenic |
| TGGTGGAATGGACTATGCAA+AGG | 0.622264 | 8.2:+36894958 | MS.gene65562:CDS |
| GCTTTCCTTTAAGAACAGGA+TGG | 0.628821 | 8.2:-36893346 | None:intergenic |
| TTTGTATGAACCACCACCTG+TGG | 0.635445 | 8.2:-36894077 | None:intergenic |
| GCTAGGGATAAATCTTGACA+AGG | 0.666525 | 8.2:+36894123 | MS.gene65562:CDS |
| AGTGGAACGAGTATAGGTGG+AGG | 0.675883 | 8.2:+36894724 | MS.gene65562:CDS |
| TTATCAGGGCAACAACAAAG+AGG | 0.690955 | 8.2:+36894910 | MS.gene65562:CDS |
| ACCATGAAACTTCATCCTGG+AGG | 0.702347 | 8.2:+36893425 | MS.gene65562:CDS |
| TATTGAGTGTAGTGTGTATG+CGG | 0.711094 | 8.2:+36897145 | MS.gene65562:CDS |
| ATTGTTGTGAAGGCCACAGG+TGG | 0.737174 | 8.2:+36894064 | MS.gene65562:intron |
| TTCATGAGTTCTGATAAACA+TGG | 0.742858 | 8.2:+36897011 | MS.gene65562:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATATTAAAAAATTCAGAAT+TGG | - | chr8.2:36894631-36894650 | None:intergenic | 10.0% |
| !! | ATTTATTTGATGTTTAAATA+TGG | - | chr8.2:36894254-36894273 | None:intergenic | 10.0% |
| !! | TTTATTTGATGTTTAAATAT+GGG | - | chr8.2:36894253-36894272 | None:intergenic | 10.0% |
| !! | ACAATAAATATATAAATAGG+AGG | - | chr8.2:36896078-36896097 | None:intergenic | 15.0% |
| !! | AGAATGATTTCAAATAATAT+TGG | + | chr8.2:36895222-36895241 | MS.gene65562:CDS | 15.0% |
| !! | TAATAAACGTTTAAATAAGT+TGG | - | chr8.2:36892058-36892077 | None:intergenic | 15.0% |
| !! | TAATTCATAGAATTTGTATT+GGG | - | chr8.2:36893126-36893145 | None:intergenic | 15.0% |
| !! | TGCACAATAAATATATAAAT+AGG | - | chr8.2:36896081-36896100 | None:intergenic | 15.0% |
| !! | TTAATTACCTTAATAGATAT+TGG | - | chr8.2:36893643-36893662 | None:intergenic | 15.0% |
| !!! | TGAATCTTTGTTTATTTTTT+AGG | + | chr8.2:36896925-36896944 | MS.gene65562:intron | 15.0% |
| !! | AAAAAAATAACTTAAGGCAT+AGG | + | chr8.2:36892275-36892294 | MS.gene65562:intron | 20.0% |
| !! | AAAAAATAAAACCAAATTGC+AGG | - | chr8.2:36895382-36895401 | None:intergenic | 20.0% |
| !! | AAGATTATTTATTGAACGAA+TGG | - | chr8.2:36894301-36894320 | None:intergenic | 20.0% |
| !! | AATACAGAGAAGAAAAAAAT+AGG | - | chr8.2:36895465-36895484 | None:intergenic | 20.0% |
| !! | AATCTCAAATGAGTTATTAT+TGG | - | chr8.2:36896382-36896401 | None:intergenic | 20.0% |
| !! | ACAAATTTCGAATTTATAGA+AGG | + | chr8.2:36892482-36892501 | MS.gene65562:intron | 20.0% |
| !! | ATACAGAGAAGAAAAAAATA+GGG | - | chr8.2:36895464-36895483 | None:intergenic | 20.0% |
| !! | ATCAAAATTGATCAGAATAT+TGG | - | chr8.2:36891978-36891997 | None:intergenic | 20.0% |
| !! | ATTGTATCATCATATTAATC+AGG | - | chr8.2:36895013-36895032 | None:intergenic | 20.0% |
| !! | CATTAAAATTGAACAGAAAA+TGG | + | chr8.2:36895954-36895973 | MS.gene65562:intron | 20.0% |
| !! | GTAATTCATAGAATTTGTAT+TGG | - | chr8.2:36893127-36893146 | None:intergenic | 20.0% |
| !! | TAATAGGATAATCCAATATA+AGG | + | chr8.2:36892348-36892367 | MS.gene65562:intron | 20.0% |
| !! | TTAAACATCAAATAAATGAC+TGG | + | chr8.2:36894257-36894276 | MS.gene65562:intron | 20.0% |
| !! | TTGTTTATTAATCCTATACT+AGG | + | chr8.2:36895767-36895786 | MS.gene65562:intron | 20.0% |
| !!! | AAAAGATGATGATTATTTTG+TGG | + | chr8.2:36893265-36893284 | MS.gene65562:CDS | 20.0% |
| !!! | AACATATATGCTAAACTTTT+GGG | - | chr8.2:36894330-36894349 | None:intergenic | 20.0% |
| !!! | AATATTCTGATCAATTTTGA+TGG | + | chr8.2:36891977-36891996 | MS.gene65562:intron | 20.0% |
| !!! | AATATTTATGTCACTTTAAG+CGG | + | chr8.2:36896100-36896119 | MS.gene65562:intron | 20.0% |
| !!! | ATACATTGCATTTTATTGAA+TGG | - | chr8.2:36893990-36894009 | None:intergenic | 20.0% |
| !!! | ATATTCTTTTTTGTTGAACA+TGG | - | chr8.2:36896565-36896584 | None:intergenic | 20.0% |
| !!! | ATTACTCTAAACGTTTTAAA+TGG | + | chr8.2:36895031-36895050 | MS.gene65562:intron | 20.0% |
| !!! | TATGCCTTAAGTTATTTTTT+TGG | - | chr8.2:36892276-36892295 | None:intergenic | 20.0% |
| !!! | TCAATGTTTTCAATTCATAT+AGG | + | chr8.2:36894672-36894691 | MS.gene65562:intron | 20.0% |
| !!! | TGTTTATTTTTTAGGTCTAA+AGG | + | chr8.2:36896933-36896952 | MS.gene65562:intron | 20.0% |
| !!! | TTTAGAATTAAGCTGTTTTT+GGG | + | chr8.2:36892029-36892048 | MS.gene65562:intron | 20.0% |
| !!! | TTTTAGAATTAAGCTGTTTT+TGG | + | chr8.2:36892028-36892047 | MS.gene65562:intron | 20.0% |
| !!! | TTTTAGGACATATTCATTAT+GGG | + | chr8.2:36894809-36894828 | MS.gene65562:intron | 20.0% |
| !!! | TTTTTAGGACATATTCATTA+TGG | + | chr8.2:36894808-36894827 | MS.gene65562:intron | 20.0% |
| ! | AAAATTAGAATTCTGTCCAA+TGG | + | chr8.2:36895977-36895996 | MS.gene65562:intron | 25.0% |
| ! | AAGTCAACCAATATCTATTA+AGG | + | chr8.2:36893633-36893652 | MS.gene65562:CDS | 25.0% |
| ! | AATACTTCAGAGAAATCAAA+AGG | + | chr8.2:36893314-36893333 | MS.gene65562:CDS | 25.0% |
| ! | ACTACTACTAACAGTAAAAA+TGG | - | chr8.2:36891902-36891921 | None:intergenic | 25.0% |
| ! | AGCATAATTAGTATGTTAGT+AGG | - | chr8.2:36894203-36894222 | None:intergenic | 25.0% |
| ! | AGGAGATTAAATTAACACTA+AGG | + | chr8.2:36892863-36892882 | MS.gene65562:intron | 25.0% |
| ! | ATACAATACAAGAGAATCAA+AGG | - | chr8.2:36892841-36892860 | None:intergenic | 25.0% |
| ! | ATTGATCAGAATATTGGAAA+AGG | - | chr8.2:36891972-36891991 | None:intergenic | 25.0% |
| ! | CAACCATTATAAACATAGAA+AGG | - | chr8.2:36895423-36895442 | None:intergenic | 25.0% |
| ! | CAAGCCAAAAAAATAACTTA+AGG | + | chr8.2:36892269-36892288 | MS.gene65562:intron | 25.0% |
| ! | CCAATATTAACAAGAAGATA+TGG | - | chr8.2:36894549-36894568 | None:intergenic | 25.0% |
| ! | CCATATCTTCTTGTTAATAT+TGG | + | chr8.2:36894546-36894565 | MS.gene65562:CDS | 25.0% |
| ! | CTAAGTTTATTGTTGAGAAT+GGG | + | chr8.2:36892637-36892656 | MS.gene65562:intron | 25.0% |
| ! | CTTTCTATGTTTATAATGGT+TGG | + | chr8.2:36895421-36895440 | MS.gene65562:intron | 25.0% |
| ! | GATTCTCTTGTATTGTATAT+AGG | + | chr8.2:36892843-36892862 | MS.gene65562:intron | 25.0% |
| ! | GATTTCAAATAATATTGGAC+AGG | + | chr8.2:36895227-36895246 | MS.gene65562:CDS | 25.0% |
| ! | GGAGATTAAATTAACACTAA+GGG | + | chr8.2:36892864-36892883 | MS.gene65562:intron | 25.0% |
| ! | GTACCTTTCTATGTTTATAA+TGG | + | chr8.2:36895417-36895436 | MS.gene65562:intron | 25.0% |
| ! | TAAGAATTTAACTCTGCAAT+TGG | - | chr8.2:36896044-36896063 | None:intergenic | 25.0% |
| ! | TAATGAGTACGGTATTATTT+GGG | + | chr8.2:36893176-36893195 | MS.gene65562:intron | 25.0% |
| ! | TACACAAACACTTGTATAAT+AGG | + | chr8.2:36892332-36892351 | MS.gene65562:intron | 25.0% |
| ! | TCGAATTTATAGAAGGATTA+TGG | + | chr8.2:36892489-36892508 | MS.gene65562:intron | 25.0% |
| ! | TCTAAGTTTATTGTTGAGAA+TGG | + | chr8.2:36892636-36892655 | MS.gene65562:intron | 25.0% |
| ! | TTAATGAGTACGGTATTATT+TGG | + | chr8.2:36893175-36893194 | MS.gene65562:intron | 25.0% |
| ! | TTACGTCAATTAATTGTAAC+TGG | + | chr8.2:36893573-36893592 | MS.gene65562:intron | 25.0% |
| ! | TTATGTTAGATATTAGCGTT+TGG | + | chr8.2:36895708-36895727 | MS.gene65562:intron | 25.0% |
| ! | TTGATGCTTCATAACTAATA+TGG | + | chr8.2:36896324-36896343 | MS.gene65562:intron | 25.0% |
| ! | TTGTTCAATGTTAGAAATGT+GGG | - | chr8.2:36892980-36892999 | None:intergenic | 25.0% |
| ! | TTTGTTCAATGTTAGAAATG+TGG | - | chr8.2:36892981-36893000 | None:intergenic | 25.0% |
| !! | AACTAATATGGATTATGTTG+TGG | + | chr8.2:36896336-36896355 | MS.gene65562:intron | 25.0% |
| !! | AAGTTTTTGTGAATGTTGTA+AGG | - | chr8.2:36896414-36896433 | None:intergenic | 25.0% |
| !! | ACAACATTCACAAAAACTTT+TGG | + | chr8.2:36896415-36896434 | MS.gene65562:intron | 25.0% |
| !! | ACTAATATGGATTATGTTGT+GGG | + | chr8.2:36896337-36896356 | MS.gene65562:intron | 25.0% |
| !! | AGTTTTTGTGAATGTTGTAA+GGG | - | chr8.2:36896413-36896432 | None:intergenic | 25.0% |
| !! | ATGTTCAACTAGTATTGTTT+TGG | - | chr8.2:36896451-36896470 | None:intergenic | 25.0% |
| !! | ATGTTTTCAATTCATATAGG+TGG | + | chr8.2:36894675-36894694 | MS.gene65562:intron | 25.0% |
| !! | CAACATATATGCTAAACTTT+TGG | - | chr8.2:36894331-36894350 | None:intergenic | 25.0% |
| !! | GCTTAGAATTATGTTTTCTT+AGG | + | chr8.2:36893090-36893109 | MS.gene65562:intron | 25.0% |
| !! | TAACATGCAAAGTATCATTT+AGG | - | chr8.2:36895556-36895575 | None:intergenic | 25.0% |
| !! | TACAGACTTTTGATAAGAAA+AGG | + | chr8.2:36892692-36892711 | MS.gene65562:intron | 25.0% |
| !! | TGTTATTGATAGTTGTTTGA+TGG | + | chr8.2:36895571-36895590 | MS.gene65562:intron | 25.0% |
| !! | TTAGTTATGAAGCATCAAAT+TGG | - | chr8.2:36896322-36896341 | None:intergenic | 25.0% |
| !! | TTCTGATTTTGTTAGAATTG+TGG | + | chr8.2:36892723-36892742 | MS.gene65562:intron | 25.0% |
| !! | TTCTTTCATTGATAACAGAT+TGG | + | chr8.2:36895099-36895118 | MS.gene65562:intron | 25.0% |
| !! | TTGATTTTTACTAAGCTTCT+AGG | - | chr8.2:36893866-36893885 | None:intergenic | 25.0% |
| !! | TTTTATTAGCGAATCTTCTT+GGG | + | chr8.2:36895738-36895757 | MS.gene65562:intron | 25.0% |
| !!! | ACAAAAACTTTTGGTTCTAT+AGG | + | chr8.2:36896424-36896443 | MS.gene65562:intron | 25.0% |
| !!! | ATATTTATGTCACTTTAAGC+GGG | + | chr8.2:36896101-36896120 | MS.gene65562:intron | 25.0% |
| !!! | TACCACATTGATTAGTTTTA+TGG | + | chr8.2:36894354-36894373 | MS.gene65562:intron | 25.0% |
| AAACATAATTCTAAGCTGAG+AGG | - | chr8.2:36893086-36893105 | None:intergenic | 30.0% | |
| AAAGGCAATGTCTGATAAAA+AGG | + | chr8.2:36895155-36895174 | MS.gene65562:CDS | 30.0% | |
| AACAACAACCTTATCCAATT+AGG | - | chr8.2:36892550-36892569 | None:intergenic | 30.0% | |
| AACATTATCTTAGGGCTATT+CGG | + | chr8.2:36895059-36895078 | MS.gene65562:intron | 30.0% | |
| AATCTATACTAGTGCACTTA+CGG | + | chr8.2:36892243-36892262 | MS.gene65562:intron | 30.0% | |
| AATGAAAACCATTGTTGTGA+AGG | + | chr8.2:36894054-36894073 | MS.gene65562:intron | 30.0% | |
| AATGTTCTCTATCTGTTGAT+AGG | + | chr8.2:36893215-36893234 | MS.gene65562:intron | 30.0% | |
| ATAAGGGAAACAGAAACAAA+TGG | - | chr8.2:36893698-36893717 | None:intergenic | 30.0% | |
| ATGAAGCGAATAAAAAGGAA+TGG | + | chr8.2:36895894-36895913 | MS.gene65562:intron | 30.0% | |
| ATGGAGATCAACATTATCTT+AGG | + | chr8.2:36895050-36895069 | MS.gene65562:intron | 30.0% | |
| ATGTTTATCAGAACTCATGA+AGG | - | chr8.2:36897012-36897031 | None:intergenic | 30.0% | |
| CACAAACAACTACACTATTA+TGG | - | chr8.2:36894380-36894399 | None:intergenic | 30.0% | |
| CTGTTATGAAGCGAATAAAA+AGG | + | chr8.2:36895889-36895908 | MS.gene65562:intron | 30.0% | |
| CTTAGTCGCTAAATAAAAGA+AGG | + | chr8.2:36895527-36895546 | MS.gene65562:intron | 30.0% | |
| CTTCTTGTTAATATTGGATC+TGG | + | chr8.2:36894552-36894571 | MS.gene65562:CDS | 30.0% | |
| GACAAACAATATCAAGTATC+AGG | - | chr8.2:36893486-36893505 | None:intergenic | 30.0% | |
| GATAGTGTATCCATTGTAAA+AGG | - | chr8.2:36896246-36896265 | None:intergenic | 30.0% | |
| GCTTAACCAATAATTCTTTG+AGG | - | chr8.2:36897037-36897056 | None:intergenic | 30.0% | |
| GGCATAATTATAGCAGTAAA+TGG | - | chr8.2:36892820-36892839 | None:intergenic | 30.0% | |
| TAATGCATGGAAAGTTTGAT+AGG | + | chr8.2:36896834-36896853 | MS.gene65562:intron | 30.0% | |
| TAGTTGAATTGCTATCACTT+AGG | + | chr8.2:36892609-36892628 | MS.gene65562:intron | 30.0% | |
| TGATAAACATGAGTTGTTGA+TGG | - | chr8.2:36891818-36891837 | None:intergenic | 30.0% | |
| TGATTACAGTTACAGTGTAT+GGG | - | chr8.2:36893508-36893527 | None:intergenic | 30.0% | |
| TGGAGATCAACATTATCTTA+GGG | + | chr8.2:36895051-36895070 | MS.gene65562:intron | 30.0% | |
| TTGATTACAGTTACAGTGTA+TGG | - | chr8.2:36893509-36893528 | None:intergenic | 30.0% | |
| TTGCTGGAATTAAGTTATCA+GGG | + | chr8.2:36894896-36894915 | MS.gene65562:CDS | 30.0% | |
| TTTCAATTCATATAGGTGGA+AGG | + | chr8.2:36894679-36894698 | MS.gene65562:intron | 30.0% | |
| TTTCTGATGAAAATCATGTC+AGG | - | chr8.2:36896893-36896912 | None:intergenic | 30.0% | |
| ! | AAAATGATTTGTAGCATCTC+TGG | + | chr8.2:36892999-36893018 | MS.gene65562:intron | 30.0% |
| ! | AATAGATATTGGTTGACTTC+CGG | - | chr8.2:36893632-36893651 | None:intergenic | 30.0% |
| ! | AATTCTCAAAGTGCTTAAGA+AGG | - | chr8.2:36894407-36894426 | None:intergenic | 30.0% |
| ! | AGAATTATTGGTTAAGCAAG+AGG | + | chr8.2:36897040-36897059 | MS.gene65562:CDS | 30.0% |
| ! | AGCTTGTTTACACCTTATAT+TGG | - | chr8.2:36892363-36892382 | None:intergenic | 30.0% |
| ! | AGCTTTTACATACATATGCA+TGG | + | chr8.2:36895685-36895704 | MS.gene65562:intron | 30.0% |
| ! | ATGCTTGTTGGAGATATTTA+TGG | + | chr8.2:36894938-36894957 | MS.gene65562:CDS | 30.0% |
| ! | GTTTTCATTATGCAGATGTT+AGG | - | chr8.2:36895849-36895868 | None:intergenic | 30.0% |
| ! | TATCTGTTGCTGTTAATTTC+TGG | + | chr8.2:36896262-36896281 | MS.gene65562:CDS | 30.0% |
| ! | TGATTTTGTTAGAATTGTGG+AGG | + | chr8.2:36892726-36892745 | MS.gene65562:intron | 30.0% |
| ! | TGTCTTGTTCTTCTTTCTAT+AGG | + | chr8.2:36894449-36894468 | MS.gene65562:intron | 30.0% |
| ! | TGTTGTTGTTGATATGATCA+AGG | + | chr8.2:36892566-36892585 | MS.gene65562:intron | 30.0% |
| ! | TTCATGAGTTCTGATAAACA+TGG | + | chr8.2:36897011-36897030 | MS.gene65562:CDS | 30.0% |
| ! | TTTAAGCGGGAAATGAATTT+TGG | + | chr8.2:36896114-36896133 | MS.gene65562:intron | 30.0% |
| !! | ACAATTTTAGCACATTCCTA+AGG | + | chr8.2:36896728-36896747 | MS.gene65562:intron | 30.0% |
| !! | CAATTTTAGCACATTCCTAA+GGG | + | chr8.2:36896729-36896748 | MS.gene65562:intron | 30.0% |
| !! | GATGATGATTATTTTGTGGA+CGG | + | chr8.2:36893269-36893288 | MS.gene65562:CDS | 30.0% |
| !! | GATTTCTCTGAAGTATTTCT+AGG | - | chr8.2:36893311-36893330 | None:intergenic | 30.0% |
| !! | GTTTTATTAGCGAATCTTCT+TGG | + | chr8.2:36895737-36895756 | MS.gene65562:intron | 30.0% |
| !! | TGATCAATTTTGATGGAGAT+TGG | + | chr8.2:36891984-36892003 | MS.gene65562:intron | 30.0% |
| !!! | AATAGCATCTAGTTTTGGAA+AGG | + | chr8.2:36895137-36895156 | MS.gene65562:CDS | 30.0% |
| !!! | ATTTTTTAGGTCTAAAGGTG+AGG | + | chr8.2:36896938-36896957 | MS.gene65562:intron | 30.0% |
| !!! | TTGGTGGATTTTTTATTCAG+AGG | + | chr8.2:36896217-36896236 | MS.gene65562:CDS | 30.0% |
| AAAGAGGTAGATATGCTTGT+TGG | + | chr8.2:36894926-36894945 | MS.gene65562:CDS | 35.0% | |
| AACAACCTTATCCAATTAGG+TGG | - | chr8.2:36892547-36892566 | None:intergenic | 35.0% | |
| AATGTGGGAAACAAACACAA+TGG | - | chr8.2:36892965-36892984 | None:intergenic | 35.0% | |
| ACATGGCCTCAAAGAATTAT+TGG | + | chr8.2:36897028-36897047 | MS.gene65562:CDS | 35.0% | |
| AGAATATTGTTGTGTGCACA+AGG | + | chr8.2:36895601-36895620 | MS.gene65562:intron | 35.0% | |
| ATACCTATATGGGTGATCAA+AGG | + | chr8.2:36894490-36894509 | MS.gene65562:CDS | 35.0% | |
| ATCAACAGCGAAAGTTAACT+TGG | - | chr8.2:36897081-36897100 | None:intergenic | 35.0% | |
| ATGTTAGGTTAGAGAATGGT+AGG | - | chr8.2:36895834-36895853 | None:intergenic | 35.0% | |
| CAACTAGATGGTGAATTGTT+TGG | + | chr8.2:36897113-36897132 | MS.gene65562:CDS | 35.0% | |
| CACTCGATACATTGTACAAA+TGG | - | chr8.2:36895331-36895350 | None:intergenic | 35.0% | |
| CAGACTATCTTAATCTAGTG+AGG | + | chr8.2:36893049-36893068 | MS.gene65562:intron | 35.0% | |
| CTACTGAAATCAGTGCAAAA+TGG | - | chr8.2:36895638-36895657 | None:intergenic | 35.0% | |
| CTAGATTAAGATAGTCTGCA+AGG | - | chr8.2:36893047-36893066 | None:intergenic | 35.0% | |
| CTTGTTGGAGATATTTATGG+TGG | + | chr8.2:36894941-36894960 | MS.gene65562:CDS | 35.0% | |
| GAATATTGTTGTGTGCACAA+GGG | + | chr8.2:36895602-36895621 | MS.gene65562:intron | 35.0% | |
| GCAGAACAGTAATAAGAATG+TGG | - | chr8.2:36893550-36893569 | None:intergenic | 35.0% | |
| GGACACAAATTCAATAGCTA+AGG | - | chr8.2:36893824-36893843 | None:intergenic | 35.0% | |
| GGCAGAGTTAAATATGATTG+TGG | + | chr8.2:36895657-36895676 | MS.gene65562:intron | 35.0% | |
| GGCCATAAAACTAATCAATG+TGG | - | chr8.2:36894359-36894378 | None:intergenic | 35.0% | |
| GTTAACATCAATGCACTTTG+TGG | + | chr8.2:36894851-36894870 | MS.gene65562:intron | 35.0% | |
| GTTGCTGGAATTAAGTTATC+AGG | + | chr8.2:36894895-36894914 | MS.gene65562:CDS | 35.0% | |
| TAGAAGGATTATGGTTCAAC+AGG | + | chr8.2:36892498-36892517 | MS.gene65562:intron | 35.0% | |
| TAGCACTTGTGATCAACAAT+AGG | + | chr8.2:36892434-36892453 | MS.gene65562:intron | 35.0% | |
| TAGCTATTGAATTTGTGTCC+TGG | + | chr8.2:36893824-36893843 | MS.gene65562:intron | 35.0% | |
| TATTGAGTGTAGTGTGTATG+CGG | + | chr8.2:36897145-36897164 | MS.gene65562:CDS | 35.0% | |
| TCAATTGAAGTCCAATCGTT+CGG | + | chr8.2:36892113-36892132 | MS.gene65562:intron | 35.0% | |
| TCATGTTTATCATCTTGCTC+TGG | + | chr8.2:36891826-36891845 | MS.gene65562:CDS | 35.0% | |
| TCTTGACAAGGAAGATGAAA+TGG | + | chr8.2:36894135-36894154 | MS.gene65562:CDS | 35.0% | |
| TGAACACAAAAGATAGCCTT+CGG | + | chr8.2:36896483-36896502 | MS.gene65562:intron | 35.0% | |
| TGAATCCACCTAATTGGATA+AGG | + | chr8.2:36892539-36892558 | MS.gene65562:intron | 35.0% | |
| TGTAACTGAATCCACCTAAT+TGG | + | chr8.2:36892533-36892552 | MS.gene65562:intron | 35.0% | |
| TTCAGCTAGCATTTGAACTA+AGG | - | chr8.2:36892144-36892163 | None:intergenic | 35.0% | |
| TTCATATAGGTGGAAGGAAA+TGG | + | chr8.2:36894685-36894704 | MS.gene65562:intron | 35.0% | |
| TTCTTAGACTAGAAAACCGT+AGG | + | chr8.2:36892926-36892945 | MS.gene65562:intron | 35.0% | |
| TTGAACGAATGGCAGAAAAA+TGG | - | chr8.2:36894290-36894309 | None:intergenic | 35.0% | |
| TTGATCACCCATATAGGTAT+AGG | - | chr8.2:36894490-36894509 | None:intergenic | 35.0% | |
| ! | ACGGTATTATTTGGGTTTCT+TGG | + | chr8.2:36893184-36893203 | MS.gene65562:intron | 35.0% |
| ! | ACTTAAATGCCCTTCGTTTT+GGG | + | chr8.2:36896178-36896197 | MS.gene65562:CDS | 35.0% |
| ! | ATAGATATTGGTTGACTTCC+GGG | - | chr8.2:36893631-36893650 | None:intergenic | 35.0% |
| ! | CTATACTAGGTGTCAGTTTT+CGG | + | chr8.2:36895780-36895799 | MS.gene65562:intron | 35.0% |
| ! | CTTGGTAATTTCTCGACAAT+AGG | + | chr8.2:36892397-36892416 | MS.gene65562:intron | 35.0% |
| ! | CTTTGAGAATTTCGCAATAC+AGG | + | chr8.2:36894416-36894435 | MS.gene65562:intron | 35.0% |
| ! | TACTTAAATGCCCTTCGTTT+TGG | + | chr8.2:36896177-36896196 | MS.gene65562:CDS | 35.0% |
| ! | TATCATCTTGCTCTGGATAT+TGG | + | chr8.2:36891833-36891852 | MS.gene65562:CDS | 35.0% |
| ! | TGGAGATATTTATGGTGGAA+TGG | + | chr8.2:36894946-36894965 | MS.gene65562:CDS | 35.0% |
| ! | TTGAGCTTTCCTTTAAGAAC+AGG | - | chr8.2:36893353-36893372 | None:intergenic | 35.0% |
| ! | TTGTAACTGGTGATGAATTC+AGG | + | chr8.2:36893586-36893605 | MS.gene65562:intron | 35.0% |
| !! | ACATGAGTTGTTGATGGATT+AGG | - | chr8.2:36891812-36891831 | None:intergenic | 35.0% |
| !! | ACTGCAATAGCATCTAGTTT+TGG | + | chr8.2:36895132-36895151 | MS.gene65562:CDS | 35.0% |
| !! | AGCTTTTAACTCAATGCAAG+AGG | + | chr8.2:36894767-36894786 | MS.gene65562:CDS | 35.0% |
| !! | AGTTGTTGATGGATTAGGAT+CGG | - | chr8.2:36891807-36891826 | None:intergenic | 35.0% |
| !! | CTCTCATTTGCTATAATGCA+TGG | + | chr8.2:36896821-36896840 | MS.gene65562:intron | 35.0% |
| !! | TATTGTTGAGAATGGGTTGT+GGG | + | chr8.2:36892644-36892663 | MS.gene65562:intron | 35.0% |
| !! | TCAATTTTGATGGAGATTGG+TGG | + | chr8.2:36891987-36892006 | MS.gene65562:intron | 35.0% |
| !! | TTATTGTTGAGAATGGGTTG+TGG | + | chr8.2:36892643-36892662 | MS.gene65562:intron | 35.0% |
| !!! | CATTTTGCACTGATTTCAGT+AGG | + | chr8.2:36895636-36895655 | MS.gene65562:intron | 35.0% |
| !!! | CTGAAGAGGATATTTTTTGG+TGG | + | chr8.2:36896201-36896220 | MS.gene65562:CDS | 35.0% |
| !!! | GCTATTTTTGTAAGCTCTCT+CGG | + | chr8.2:36892304-36892323 | MS.gene65562:intron | 35.0% |
| AAGACCATGAAACTTCATCC+TGG | + | chr8.2:36893422-36893441 | MS.gene65562:CDS | 40.0% | |
| AAGAGATCGAGCCATATCTT+CGG | - | chr8.2:36895199-36895218 | None:intergenic | 40.0% | |
| AAGATGCATGGTCAACTAGA+TGG | + | chr8.2:36897101-36897120 | MS.gene65562:CDS | 40.0% | |
| AAGCCAACGTTTATCTACGT+TGG | + | chr8.2:36896668-36896687 | MS.gene65562:intron | 40.0% | |
| AGAAGTGATCCTTTGTGAAG+AGG | - | chr8.2:36896006-36896025 | None:intergenic | 40.0% | |
| AGATTACAGACCCGAAGATA+TGG | + | chr8.2:36895185-36895204 | MS.gene65562:CDS | 40.0% | |
| AGCTCTTTCAAATGCACTCT+TGG | + | chr8.2:36892379-36892398 | MS.gene65562:intron | 40.0% | |
| AGGAACCATCCTGTTCTTAA+AGG | + | chr8.2:36893341-36893360 | MS.gene65562:CDS | 40.0% | |
| ATGCAGATGTAGAAGTTGGA+GGG | + | chr8.2:36893943-36893962 | MS.gene65562:intron | 40.0% | |
| ATGCCAACGTAGATAAACGT+TGG | - | chr8.2:36896674-36896693 | None:intergenic | 40.0% | |
| ATGTCTCGATACCTGCAATT+TGG | + | chr8.2:36895368-36895387 | MS.gene65562:intron | 40.0% | |
| ATTGCTTCAGATCATAGCAG+AGG | - | chr8.2:36893794-36893813 | None:intergenic | 40.0% | |
| CAATGGTTTCCTCTTCACAA+AGG | + | chr8.2:36895994-36896013 | MS.gene65562:intron | 40.0% | |
| CAGAGAAATCAAAAGGCAGA+AGG | + | chr8.2:36893321-36893340 | MS.gene65562:CDS | 40.0% | |
| CAGTAGCATTTGGAAATCCA+CGG | - | chr8.2:36895264-36895283 | None:intergenic | 40.0% | |
| CCATATAGGTATAGGCTTCT+CGG | - | chr8.2:36894482-36894501 | None:intergenic | 40.0% | |
| CGAAAACTGACACCTAGTAT+AGG | - | chr8.2:36895782-36895801 | None:intergenic | 40.0% | |
| CGAGAAGCCTATACCTATAT+GGG | + | chr8.2:36894480-36894499 | MS.gene65562:CDS | 40.0% | |
| CGTACTCATTAAAAGCCAGA+CGG | - | chr8.2:36893167-36893186 | None:intergenic | 40.0% | |
| CTGATCATGGTCATGTTTGT+CGG | - | chr8.2:36896516-36896535 | None:intergenic | 40.0% | |
| CTTTGTGAAGAGGAAACCAT+TGG | - | chr8.2:36895996-36896015 | None:intergenic | 40.0% | |
| GAACACAAAAGATAGCCTTC+GGG | + | chr8.2:36896484-36896503 | MS.gene65562:intron | 40.0% | |
| GATCAAGGTTGAAGTGATCA+TGG | + | chr8.2:36892581-36892600 | MS.gene65562:intron | 40.0% | |
| GCAGATGTTAGGTTAGAGAA+TGG | - | chr8.2:36895838-36895857 | None:intergenic | 40.0% | |
| GCTAGGGATAAATCTTGACA+AGG | + | chr8.2:36894123-36894142 | MS.gene65562:CDS | 40.0% | |
| GGAAGCAAGTTATGGTTTGA+AGG | + | chr8.2:36896758-36896777 | MS.gene65562:intron | 40.0% | |
| GGAATATATGTATGCTGACC+AGG | - | chr8.2:36893845-36893864 | None:intergenic | 40.0% | |
| GGGTTCTATATAGACTCACA+GGG | + | chr8.2:36894829-36894848 | MS.gene65562:intron | 40.0% | |
| TAACTTGGTCGGACTTTGTT+GGG | - | chr8.2:36897066-36897085 | None:intergenic | 40.0% | |
| TGGGTTCTATATAGACTCAC+AGG | + | chr8.2:36894828-36894847 | MS.gene65562:intron | 40.0% | |
| TGGTAATCTTACTCGACCTA+CGG | - | chr8.2:36892945-36892964 | None:intergenic | 40.0% | |
| TTAGAGAATGGTAGGAAGAG+AGG | - | chr8.2:36895826-36895845 | None:intergenic | 40.0% | |
| TTATCAGGGCAACAACAAAG+AGG | + | chr8.2:36894910-36894929 | MS.gene65562:CDS | 40.0% | |
| TTGCCTTTGATCACCCATAT+AGG | - | chr8.2:36894496-36894515 | None:intergenic | 40.0% | |
| TTGCTTCAGATCATAGCAGA+GGG | - | chr8.2:36893793-36893812 | None:intergenic | 40.0% | |
| ! | ACAGCGAAAGTTAACTTGGT+CGG | - | chr8.2:36897077-36897096 | None:intergenic | 40.0% |
| ! | ACCTATCTGCAGAAGCATAA+GGG | - | chr8.2:36893714-36893733 | None:intergenic | 40.0% |
| ! | AGGAGCAAATTTTCTTCTCG+AGG | + | chr8.2:36894171-36894190 | MS.gene65562:CDS | 40.0% |
| ! | ATCCCTAGCCTTTCTTTGAA+GGG | - | chr8.2:36894112-36894131 | None:intergenic | 40.0% |
| ! | ATCTGGTGTTAGCATGATCA+AGG | + | chr8.2:36894569-36894588 | MS.gene65562:CDS | 40.0% |
| ! | GCAAATTTTCTTCTCGAGGT+AGG | + | chr8.2:36894175-36894194 | MS.gene65562:intron | 40.0% |
| ! | GCTTTCCTTTAAGAACAGGA+TGG | - | chr8.2:36893349-36893368 | None:intergenic | 40.0% |
| ! | GTCAGTTTTCGGTATCTAAG+AGG | + | chr8.2:36895791-36895810 | MS.gene65562:intron | 40.0% |
| ! | TATCCCTAGCCTTTCTTTGA+AGG | - | chr8.2:36894113-36894132 | None:intergenic | 40.0% |
| ! | TGGTGATGAATTCAGGTAGT+CGG | + | chr8.2:36893593-36893612 | MS.gene65562:intron | 40.0% |
| ! | TTAACTTGGTCGGACTTTGT+TGG | - | chr8.2:36897067-36897086 | None:intergenic | 40.0% |
| ! | TTCGCTGTTGATAAGATGCA+TGG | + | chr8.2:36897089-36897108 | MS.gene65562:CDS | 40.0% |
| !! | AATTGGCAGTTGATGAACAG+AGG | - | chr8.2:36896305-36896324 | None:intergenic | 40.0% |
| !! | AGGTATCGAGACATGCAAAA+AGG | - | chr8.2:36895362-36895381 | None:intergenic | 40.0% |
| !! | ATTGTTGAGAATGGGTTGTG+GGG | + | chr8.2:36892645-36892664 | MS.gene65562:intron | 40.0% |
| !! | GAAATGGATTGTCTTGTTGC+AGG | + | chr8.2:36894151-36894170 | MS.gene65562:CDS | 40.0% |
| !! | GATGGATTAGGATCGGAATT+TGG | - | chr8.2:36891800-36891819 | None:intergenic | 40.0% |
| !! | TTATTTTGTGGACGGTGAGA+CGG | + | chr8.2:36893277-36893296 | MS.gene65562:CDS | 40.0% |
| !!! | CGTCTGGCTTTTAATGAGTA+CGG | + | chr8.2:36893165-36893184 | MS.gene65562:intron | 40.0% |
| !!! | GGGCTGAAGAGGATATTTTT+TGG | + | chr8.2:36896198-36896217 | MS.gene65562:CDS | 40.0% |
| !!! | TCAGAGGCATCCTTTTACAA+TGG | + | chr8.2:36896233-36896252 | MS.gene65562:CDS | 40.0% |
| AAAATTCTCCACACACCTCC+AGG | - | chr8.2:36893443-36893462 | None:intergenic | 45.0% | |
| ACAGCTTAACTGCATTCCTC+CGG | - | chr8.2:36892195-36892214 | None:intergenic | 45.0% | |
| ACCATGAAACTTCATCCTGG+AGG | + | chr8.2:36893425-36893444 | MS.gene65562:CDS | 45.0% | |
| ACCCCTTCAAAGAAAGGCTA+GGG | + | chr8.2:36894107-36894126 | MS.gene65562:CDS | 45.0% | |
| ACCTCCAGGATGAAGTTTCA+TGG | - | chr8.2:36893429-36893448 | None:intergenic | 45.0% | |
| ACTCAGAAGCAAGTGTCAAG+TGG | - | chr8.2:36896870-36896889 | None:intergenic | 45.0% | |
| AGAGATCGAGCCATATCTTC+GGG | - | chr8.2:36895198-36895217 | None:intergenic | 45.0% | |
| AGGCGAAAGCAATGTTCTTG+CGG | + | chr8.2:36896958-36896977 | MS.gene65562:CDS | 45.0% | |
| ATCATTGATCCGCTTCTCTG+TGG | + | chr8.2:36892167-36892186 | MS.gene65562:intron | 45.0% | |
| ATGCAGACCCCTTCAAAGAA+AGG | + | chr8.2:36894101-36894120 | MS.gene65562:CDS | 45.0% | |
| CATAGCAGAGGGACTCAAAT+TGG | - | chr8.2:36893782-36893801 | None:intergenic | 45.0% | |
| CATGCAGATGTAGAAGTTGG+AGG | + | chr8.2:36893942-36893961 | MS.gene65562:intron | 45.0% | |
| CCGAGAAGCCTATACCTATA+TGG | + | chr8.2:36894479-36894498 | MS.gene65562:CDS | 45.0% | |
| CGACAAACATGACCATGATC+AGG | + | chr8.2:36896514-36896533 | MS.gene65562:intron | 45.0% | |
| CGAGTTAGTGGAACGAGTAT+AGG | + | chr8.2:36894718-36894737 | MS.gene65562:CDS | 45.0% | |
| CTAAGGTTCTACCGAACGAT+TGG | - | chr8.2:36892127-36892146 | None:intergenic | 45.0% | |
| CTCAGAAGCAAGTGTCAAGT+GGG | - | chr8.2:36896869-36896888 | None:intergenic | 45.0% | |
| GAAGGATTTCTTGGAGCTGT+AGG | + | chr8.2:36896984-36897003 | MS.gene65562:CDS | 45.0% | |
| GAGTAGTGCACAGTAGCATT+TGG | - | chr8.2:36895274-36895293 | None:intergenic | 45.0% | |
| GCACATGCAGATGTAGAAGT+TGG | + | chr8.2:36893939-36893958 | MS.gene65562:intron | 45.0% | |
| GGAAAGTTTGAGCGAGTTAG+TGG | + | chr8.2:36894706-36894725 | MS.gene65562:CDS | 45.0% | |
| GGTTAGCAGGAAGCAAGTTA+TGG | + | chr8.2:36896750-36896769 | MS.gene65562:intron | 45.0% | |
| GTTAGTGGAACGAGTATAGG+TGG | + | chr8.2:36894721-36894740 | MS.gene65562:CDS | 45.0% | |
| TCATTGATCCGCTTCTCTGT+GGG | + | chr8.2:36892168-36892187 | MS.gene65562:intron | 45.0% | |
| TCCCTTATGCTTCTGCAGAT+AGG | + | chr8.2:36893710-36893729 | MS.gene65562:intron | 45.0% | |
| TTGCGGCATGAAGGATTTCT+TGG | + | chr8.2:36896975-36896994 | MS.gene65562:CDS | 45.0% | |
| TTTGTATGAACCACCACCTG+TGG | - | chr8.2:36894080-36894099 | None:intergenic | 45.0% | |
| ! | CACCTATCTGCAGAAGCATA+AGG | - | chr8.2:36893715-36893734 | None:intergenic | 45.0% |
| ! | CATCTTGCTCTGGATATTGG+AGG | + | chr8.2:36891836-36891855 | MS.gene65562:CDS | 45.0% |
| ! | CTTCAGCTTTGATGAGTTGC+TGG | + | chr8.2:36894880-36894899 | MS.gene65562:intron | 45.0% |
| ! | TCCCTAGCCTTTCTTTGAAG+GGG | - | chr8.2:36894111-36894130 | None:intergenic | 45.0% |
| ! | TGCAATGTAAAGTGTCCGTC+TGG | + | chr8.2:36893149-36893168 | MS.gene65562:intron | 45.0% |
| !! | TATAGGTGGAGGCACTTTCT+GGG | + | chr8.2:36894735-36894754 | MS.gene65562:CDS | 45.0% |
| !! | TGGTGGAATGGACTATGCAA+AGG | + | chr8.2:36894958-36894977 | MS.gene65562:CDS | 45.0% |
| !! | AATTTAAAAAAAAAATTTAG+TGG | + | chr8.2:36895498-36895517 | MS.gene65562:intron | 5.0% |
| !!! | TTTATTACTTATTTATTTTT+AGG | + | chr8.2:36894793-36894812 | MS.gene65562:intron | 5.0% |
| ACCATTGTTGTGAAGGCCAC+AGG | + | chr8.2:36894061-36894080 | MS.gene65562:intron | 50.0% | |
| ACCTGTGGCCTTCACAACAA+TGG | - | chr8.2:36894065-36894084 | None:intergenic | 50.0% | |
| AGGCTACGTCTGAACTTCTC+AGG | + | chr8.2:36896534-36896553 | MS.gene65562:intron | 50.0% | |
| AGTCGGCAGCAAGAAAATCC+CGG | + | chr8.2:36893610-36893629 | MS.gene65562:CDS | 50.0% | |
| AGTGGAACGAGTATAGGTGG+AGG | + | chr8.2:36894724-36894743 | MS.gene65562:CDS | 50.0% | |
| ATTGTTGTGAAGGCCACAGG+TGG | + | chr8.2:36894064-36894083 | MS.gene65562:intron | 50.0% | |
| CCTCTTCAGCCCAAAACGAA+GGG | - | chr8.2:36896190-36896209 | None:intergenic | 50.0% | |
| CTTGCTTCCTGCTAACCCTT+AGG | - | chr8.2:36896747-36896766 | None:intergenic | 50.0% | |
| GACAGGTCAGTATTGTACCG+TGG | + | chr8.2:36895244-36895263 | MS.gene65562:intron | 50.0% | |
| GACCCCTTCAAAGAAAGGCT+AGG | + | chr8.2:36894106-36894125 | MS.gene65562:CDS | 50.0% | |
| GCAATGTTCTTGCGGCATGA+AGG | + | chr8.2:36896966-36896985 | MS.gene65562:CDS | 50.0% | |
| GTTCAGACGTAGCCTGATCA+TGG | - | chr8.2:36896529-36896548 | None:intergenic | 50.0% | |
| TCCTCTTCAGCCCAAAACGA+AGG | - | chr8.2:36896191-36896210 | None:intergenic | 50.0% | |
| ! | AACTTCATCCTGGAGGTGTG+TGG | + | chr8.2:36893432-36893451 | MS.gene65562:intron | 50.0% |
| ! | ATGGGTTGTGGGGTTGACAT+TGG | + | chr8.2:36892655-36892674 | MS.gene65562:intron | 50.0% |
| ! | GCACATTCCTAAGGGTTAGC+AGG | + | chr8.2:36896737-36896756 | MS.gene65562:intron | 50.0% |
| !! | ATAGGTGGAGGCACTTTCTG+GGG | + | chr8.2:36894736-36894755 | MS.gene65562:CDS | 50.0% |
| !! | GTATAGGTGGAGGCACTTTC+TGG | + | chr8.2:36894734-36894753 | MS.gene65562:CDS | 50.0% |
| GTTTGTCGGTGACTTCCCGA+AGG | - | chr8.2:36896502-36896521 | None:intergenic | 55.0% | |
| !! | CCCTTCGTTTTGGGCTGAAG+AGG | + | chr8.2:36896187-36896206 | MS.gene65562:CDS | 55.0% |
| !! | GGAGGCACTTTCTGGGGTTT+AGG | + | chr8.2:36894742-36894761 | MS.gene65562:CDS | 55.0% |
| GATCCGCTTCTCTGTGGGAC+CGG | + | chr8.2:36892173-36892192 | MS.gene65562:intron | 60.0% | |
| GTTGTGAAGGCCACAGGTGG+TGG | + | chr8.2:36894067-36894086 | MS.gene65562:intron | 60.0% | |
| CCTCCGGTCCCACAGAGAAG+CGG | - | chr8.2:36892179-36892198 | None:intergenic | 65.0% | |
| CCGCTTCTCTGTGGGACCGG+AGG | + | chr8.2:36892176-36892195 | MS.gene65562:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 36891770 | 36897172 | 36891770 | ID=MS.gene65562 |
| chr8.2 | mRNA | 36891770 | 36897172 | 36891770 | ID=MS.gene65562.t1;Parent=MS.gene65562 |
| chr8.2 | exon | 36891770 | 36891857 | 36891770 | ID=MS.gene65562.t1.exon1;Parent=MS.gene65562.t1 |
| chr8.2 | CDS | 36891770 | 36891857 | 36891770 | ID=cds.MS.gene65562.t1;Parent=MS.gene65562.t1 |
| chr8.2 | exon | 36893237 | 36893446 | 36893237 | ID=MS.gene65562.t1.exon2;Parent=MS.gene65562.t1 |
| chr8.2 | CDS | 36893237 | 36893446 | 36893237 | ID=cds.MS.gene65562.t1;Parent=MS.gene65562.t1 |
| chr8.2 | exon | 36893608 | 36893654 | 36893608 | ID=MS.gene65562.t1.exon3;Parent=MS.gene65562.t1 |
| chr8.2 | CDS | 36893608 | 36893654 | 36893608 | ID=cds.MS.gene65562.t1;Parent=MS.gene65562.t1 |
| chr8.2 | exon | 36894076 | 36894192 | 36894076 | ID=MS.gene65562.t1.exon4;Parent=MS.gene65562.t1 |
| chr8.2 | CDS | 36894076 | 36894192 | 36894076 | ID=cds.MS.gene65562.t1;Parent=MS.gene65562.t1 |
| chr8.2 | exon | 36894471 | 36894590 | 36894471 | ID=MS.gene65562.t1.exon5;Parent=MS.gene65562.t1 |
| chr8.2 | CDS | 36894471 | 36894590 | 36894471 | ID=cds.MS.gene65562.t1;Parent=MS.gene65562.t1 |
| chr8.2 | exon | 36894694 | 36894788 | 36894694 | ID=MS.gene65562.t1.exon6;Parent=MS.gene65562.t1 |
| chr8.2 | CDS | 36894694 | 36894788 | 36894694 | ID=cds.MS.gene65562.t1;Parent=MS.gene65562.t1 |
| chr8.2 | exon | 36894886 | 36894979 | 36894886 | ID=MS.gene65562.t1.exon7;Parent=MS.gene65562.t1 |
| chr8.2 | CDS | 36894886 | 36894979 | 36894886 | ID=cds.MS.gene65562.t1;Parent=MS.gene65562.t1 |
| chr8.2 | exon | 36895117 | 36895248 | 36895117 | ID=MS.gene65562.t1.exon8;Parent=MS.gene65562.t1 |
| chr8.2 | CDS | 36895117 | 36895248 | 36895117 | ID=cds.MS.gene65562.t1;Parent=MS.gene65562.t1 |
| chr8.2 | exon | 36896171 | 36896283 | 36896171 | ID=MS.gene65562.t1.exon9;Parent=MS.gene65562.t1 |
| chr8.2 | CDS | 36896171 | 36896283 | 36896171 | ID=cds.MS.gene65562.t1;Parent=MS.gene65562.t1 |
| chr8.2 | exon | 36896947 | 36897172 | 36896947 | ID=MS.gene65562.t1.exon10;Parent=MS.gene65562.t1 |
| chr8.2 | CDS | 36896947 | 36897172 | 36896947 | ID=cds.MS.gene65562.t1;Parent=MS.gene65562.t1 |
| Gene Sequence |
| Protein sequence |
