Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66060.t1 | XP_003622943.1 | 93.3 | 194 | 13 | 0 | 1 | 194 | 1 | 194 | 3.10E-96 | 361.3 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66060.t1 | Q9ZTW3 | 71.6 | 194 | 55 | 0 | 1 | 194 | 1 | 194 | 2.3e-76 | 286.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66060.t1 | G7L1A5 | 93.3 | 194 | 13 | 0 | 1 | 194 | 1 | 194 | 2.2e-96 | 361.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051138 | MS.gene66060 | 0.809683 | 1.68E-50 | -1.69E-46 |
| MS.gene059690 | MS.gene66060 | 0.825204 | 5.33E-54 | -1.69E-46 |
| MS.gene059694 | MS.gene66060 | 0.8008 | 1.22E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66060.t1 | MTR_7g058640 | 93.333 | 195 | 13 | 0 | 1 | 195 | 1 | 195 | 7.43e-138 | 384 |
| MS.gene66060.t1 | MTR_7g058640 | 95.349 | 172 | 8 | 0 | 1 | 172 | 1 | 172 | 2.10e-123 | 347 |
| MS.gene66060.t1 | MTR_4g022570 | 74.359 | 195 | 50 | 0 | 1 | 195 | 1 | 195 | 4.00e-111 | 317 |
| MS.gene66060.t1 | MTR_1g047720 | 65.728 | 213 | 73 | 0 | 1 | 213 | 1 | 213 | 6.95e-111 | 317 |
| MS.gene66060.t1 | MTR_7g058900 | 70.256 | 195 | 58 | 0 | 1 | 195 | 1 | 195 | 4.86e-104 | 299 |
| MS.gene66060.t1 | MTR_4g083490 | 66.839 | 193 | 64 | 0 | 3 | 195 | 5 | 197 | 1.14e-100 | 291 |
| MS.gene66060.t1 | MTR_2g436870 | 60.563 | 213 | 84 | 0 | 1 | 213 | 1 | 213 | 2.93e-100 | 290 |
| MS.gene66060.t1 | MTR_2g028790 | 65.285 | 193 | 67 | 0 | 3 | 195 | 7 | 199 | 3.88e-97 | 282 |
| MS.gene66060.t1 | MTR_1g111890 | 47.186 | 231 | 103 | 2 | 1 | 212 | 1 | 231 | 7.59e-80 | 239 |
| MS.gene66060.t1 | MTR_7g058640 | 94.017 | 117 | 7 | 0 | 79 | 195 | 1 | 117 | 6.84e-77 | 227 |
| MS.gene66060.t1 | MTR_1g047710 | 60.902 | 133 | 51 | 1 | 56 | 187 | 3 | 135 | 3.60e-57 | 177 |
| MS.gene66060.t1 | MTR_4g022470 | 71.028 | 107 | 31 | 0 | 64 | 170 | 10 | 116 | 1.60e-52 | 165 |
| MS.gene66060.t1 | MTR_5g089370 | 36.649 | 191 | 118 | 3 | 5 | 194 | 2 | 190 | 4.02e-38 | 132 |
| MS.gene66060.t1 | MTR_4g052550 | 32.461 | 191 | 126 | 3 | 5 | 194 | 2 | 190 | 1.75e-36 | 127 |
| MS.gene66060.t1 | MTR_4g115390 | 29.524 | 210 | 141 | 4 | 6 | 210 | 3 | 210 | 4.08e-29 | 108 |
| MS.gene66060.t1 | MTR_4g022550 | 71.053 | 38 | 11 | 0 | 158 | 195 | 10 | 47 | 1.76e-12 | 60.8 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66060.t1 | AT2G33120 | 72.308 | 195 | 54 | 0 | 1 | 195 | 1 | 195 | 1.14e-107 | 308 |
| MS.gene66060.t1 | AT1G04760 | 68.500 | 200 | 63 | 0 | 1 | 200 | 1 | 200 | 1.64e-107 | 308 |
| MS.gene66060.t1 | AT1G04760 | 68.500 | 200 | 63 | 0 | 1 | 200 | 1 | 200 | 1.64e-107 | 308 |
| MS.gene66060.t1 | AT1G04750 | 71.795 | 195 | 55 | 0 | 1 | 195 | 1 | 195 | 4.39e-107 | 307 |
| MS.gene66060.t1 | AT2G33120 | 68.966 | 203 | 55 | 1 | 1 | 195 | 1 | 203 | 1.96e-104 | 301 |
| MS.gene66060.t1 | AT2G32670 | 69.231 | 195 | 60 | 0 | 1 | 195 | 66 | 260 | 4.44e-104 | 302 |
| MS.gene66060.t1 | AT4G15780 | 60.656 | 183 | 71 | 1 | 1 | 182 | 1 | 183 | 5.70e-83 | 244 |
| MS.gene66060.t1 | AT2G33110 | 60.513 | 195 | 73 | 1 | 1 | 195 | 1 | 191 | 6.34e-83 | 246 |
| MS.gene66060.t1 | AT3G54300 | 47.639 | 233 | 99 | 2 | 1 | 212 | 1 | 231 | 5.09e-79 | 236 |
| MS.gene66060.t1 | AT3G54300 | 47.639 | 233 | 99 | 2 | 1 | 212 | 1 | 231 | 5.09e-79 | 236 |
| MS.gene66060.t1 | AT3G54300 | 47.639 | 233 | 99 | 2 | 1 | 212 | 1 | 231 | 5.09e-79 | 236 |
| MS.gene66060.t1 | AT2G33110 | 63.095 | 168 | 62 | 0 | 1 | 168 | 1 | 168 | 2.94e-76 | 228 |
| MS.gene66060.t1 | AT1G04750 | 70.940 | 117 | 34 | 0 | 79 | 195 | 1 | 117 | 1.30e-58 | 181 |
| MS.gene66060.t1 | AT1G04750 | 70.940 | 117 | 34 | 0 | 79 | 195 | 1 | 117 | 1.30e-58 | 181 |
| MS.gene66060.t1 | AT1G04750 | 70.940 | 117 | 34 | 0 | 79 | 195 | 1 | 117 | 1.30e-58 | 181 |
| MS.gene66060.t1 | AT5G22360 | 33.014 | 209 | 135 | 4 | 5 | 211 | 2 | 207 | 2.68e-39 | 135 |
| MS.gene66060.t1 | AT5G11150 | 33.175 | 211 | 134 | 4 | 5 | 213 | 2 | 207 | 6.33e-39 | 134 |
| MS.gene66060.t1 | AT5G11150 | 33.175 | 211 | 134 | 4 | 5 | 213 | 2 | 207 | 9.28e-39 | 133 |
| MS.gene66060.t1 | AT4G32150 | 34.211 | 190 | 122 | 3 | 5 | 193 | 2 | 189 | 1.20e-34 | 122 |
| MS.gene66060.t1 | AT2G25340 | 32.105 | 190 | 126 | 3 | 5 | 193 | 2 | 189 | 4.26e-32 | 116 |
| MS.gene66060.t1 | AT2G33120 | 67.742 | 62 | 20 | 0 | 134 | 195 | 52 | 113 | 4.65e-22 | 88.2 |
| MS.gene66060.t1 | AT3G24890 | 45.745 | 94 | 45 | 2 | 113 | 200 | 14 | 107 | 2.60e-18 | 77.8 |
Find 41 sgRNAs with CRISPR-Local
Find 77 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AAAAGCTTGAATAAAGAATT+TGG | 0.138378 | 7.4:-44673404 | MS.gene66060:CDS |
| CTTTGCAGGCACAAGATTTA+AGG | 0.164312 | 7.4:-44672710 | MS.gene66060:intron |
| GCAAGTTTGCTAACCTCTTC+TGG | 0.229459 | 7.4:+44673237 | None:intergenic |
| CAATCTTCACTTGACGATTA+AGG | 0.242055 | 7.4:+44673062 | None:intergenic |
| AGCTATTTCAGCAAAGTTTC+CGG | 0.255031 | 7.4:+44673913 | None:intergenic |
| TGCATATGCTCCTTCAATTT+CGG | 0.281591 | 7.4:+44673276 | None:intergenic |
| GGCGCGTGGCACGGTGATTC+TGG | 0.320729 | 7.4:-44673954 | MS.gene66060:CDS |
| TGGTTGCTGGGAGTCTTTGC+AGG | 0.323885 | 7.4:+44673882 | None:intergenic |
| AAAGCTTGAATAAAGAATTT+GGG | 0.394970 | 7.4:-44673403 | MS.gene66060:intron |
| TCCGGTGAAGTTGGTGTGCT+CGG | 0.407070 | 7.4:+44673931 | None:intergenic |
| AACTGTCAACCTTCGTGATC+AGG | 0.421098 | 7.4:-44673023 | MS.gene66060:intron |
| TTTGCAGGCACAAGATTTAA+GGG | 0.423640 | 7.4:-44672709 | MS.gene66060:intron |
| CAAGAAAGGCCATAGCAATA+TGG | 0.430285 | 7.4:+44673489 | None:intergenic |
| ATCACTTGTATACAGCTTTG+TGG | 0.457723 | 7.4:-44673975 | MS.gene66060:CDS |
| TATGTTGGAAAATATTGATC+AGG | 0.458760 | 7.4:-44673178 | MS.gene66060:intron |
| CTCCTTGATGTGATCAAGAA+AGG | 0.487927 | 7.4:+44673475 | None:intergenic |
| AGCTTACTGCCTTGTTGCTG+TGG | 0.489435 | 7.4:-44673525 | MS.gene66060:CDS |
| TCAAGTTCAAGATGTTATGT+TGG | 0.490196 | 7.4:-44673193 | MS.gene66060:CDS |
| AGCAAAGTTTCCGGTGAAGT+TGG | 0.500993 | 7.4:+44673922 | None:intergenic |
| CAGCTTTGTGGCGCGTGGCA+CGG | 0.506415 | 7.4:-44673963 | MS.gene66060:CDS |
| GTAATTTAGACCGAAATTGA+AGG | 0.508592 | 7.4:-44673286 | MS.gene66060:intron |
| GGCAAGTACTGAATCCATCA+TGG | 0.518155 | 7.4:+44673810 | None:intergenic |
| GCCGAGCACACCAACTTCAC+CGG | 0.518367 | 7.4:-44673932 | MS.gene66060:CDS |
| GGCCTTTCTTGATCACATCA+AGG | 0.528346 | 7.4:-44673477 | MS.gene66060:CDS |
| TTCAACTACCTCGCCCATGA+TGG | 0.533919 | 7.4:-44673824 | MS.gene66060:CDS |
| ATCATGGGCGAGGTAGTTGA+AGG | 0.542753 | 7.4:+44673826 | None:intergenic |
| ACTTGCGAAAGTAAAAGCTC+AGG | 0.550493 | 7.4:-44673220 | MS.gene66060:CDS |
| GTATACAGCTTTGTGGCGCG+TGG | 0.567820 | 7.4:-44673968 | MS.gene66060:CDS |
| TACTGAATCCATCATGGGCG+AGG | 0.571090 | 7.4:+44673816 | None:intergenic |
| TTTACCAAAAGATATGGTGG+AGG | 0.594903 | 7.4:-44673449 | MS.gene66060:CDS |
| TGCAGGCACAAGATTTAAGG+GGG | 0.606935 | 7.4:-44672707 | MS.gene66060:intron |
| TTGCAGGCACAAGATTTAAG+GGG | 0.610788 | 7.4:-44672708 | MS.gene66060:intron |
| GGCAATTAAGGAGAAAGATG+TGG | 0.621585 | 7.4:-44672677 | MS.gene66060:CDS |
| CAAAAGACTCCACAGCAACA+AGG | 0.623781 | 7.4:+44673516 | None:intergenic |
| GTAGTTGAAGGTATGACCAT+CGG | 0.631667 | 7.4:+44673838 | None:intergenic |
| GCAAGTACTGAATCCATCAT+GGG | 0.632742 | 7.4:+44673811 | None:intergenic |
| TTGTGTGGAACATCCAGAAG+AGG | 0.637264 | 7.4:-44673250 | MS.gene66060:CDS |
| AAATTCACTTACAACACCGA+TGG | 0.653817 | 7.4:-44673854 | MS.gene66060:CDS |
| CTTTCTTGATCACATCAAGG+AGG | 0.668827 | 7.4:-44673474 | MS.gene66060:CDS |
| GGAGCATATGCAATATTGTG+TGG | 0.672159 | 7.4:-44673265 | MS.gene66060:CDS |
| ATAAAAGGACCTGATCACGA+AGG | 0.753478 | 7.4:+44673014 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | CAATGTAATTTAGTTATTTA+TGG | + | chr7.4:44673768-44673787 | None:intergenic | 15.0% |
| !! | TAAAAGAAAAAAATAAAACG+AGG | + | chr7.4:44672796-44672815 | None:intergenic | 15.0% |
| !! | AAAAGCTTGAATAAAGAATT+TGG | - | chr7.4:44673178-44673197 | MS.gene66060:intron | 20.0% |
| !! | AAAGCTTGAATAAAGAATTT+GGG | - | chr7.4:44673179-44673198 | MS.gene66060:CDS | 20.0% |
| !! | AGGTATATATATGTCTATAT+TGG | - | chr7.4:44673424-44673443 | MS.gene66060:CDS | 20.0% |
| !! | TTATAGTTATGTAACTGATA+TGG | - | chr7.4:44673838-44673857 | MS.gene66060:CDS | 20.0% |
| !! | TTTATGGATGAACAAATAAA+AGG | + | chr7.4:44673586-44673605 | None:intergenic | 20.0% |
| !!! | TCTTTTACATAATCTAATTG+TGG | - | chr7.4:44672809-44672828 | MS.gene66060:intron | 20.0% |
| !!! | TTTTTTTTATTGTATGTGCA+TGG | - | chr7.4:44673274-44673293 | MS.gene66060:CDS | 20.0% |
| ! | CAAATCATAAATTTCCTTAG+AGG | + | chr7.4:44672966-44672985 | None:intergenic | 25.0% |
| ! | TATGTTGGAAAATATTGATC+AGG | - | chr7.4:44673404-44673423 | MS.gene66060:CDS | 25.0% |
| !! | ATTTTTACACACACATGAAT+AGG | - | chr7.4:44673722-44673741 | MS.gene66060:intron | 25.0% |
| !! | TTTTTACACACACATGAATA+GGG | - | chr7.4:44673723-44673742 | MS.gene66060:intron | 25.0% |
| !!! | ATTTTATTTGTTTTGTCTGC+AGG | - | chr7.4:44673496-44673515 | MS.gene66060:CDS | 25.0% |
| GTAATTTAGACCGAAATTGA+AGG | - | chr7.4:44673296-44673315 | MS.gene66060:intron | 30.0% | |
| TAACTGATATGGTTTGAATG+TGG | - | chr7.4:44673849-44673868 | MS.gene66060:CDS | 30.0% | |
| TCAAATGCATTTACATGTAC+TGG | - | chr7.4:44672915-44672934 | MS.gene66060:intron | 30.0% | |
| TCAAGTTCAAGATGTTATGT+TGG | - | chr7.4:44673389-44673408 | MS.gene66060:intron | 30.0% | |
| ! | GAGGATTTTACCAAAAGATA+TGG | - | chr7.4:44673127-44673146 | MS.gene66060:intron | 30.0% |
| ! | GATTTTACCAAAAGATATGG+TGG | - | chr7.4:44673130-44673149 | MS.gene66060:intron | 30.0% |
| ! | GTTGTAAGTGAATTTTGTGT+TGG | + | chr7.4:44672723-44672742 | None:intergenic | 30.0% |
| ! | TTTTACACACACATGAATAG+GGG | - | chr7.4:44673724-44673743 | MS.gene66060:intron | 30.0% |
| !! | AGTGAAGATTGATGTTTTGA+TGG | - | chr7.4:44673532-44673551 | MS.gene66060:intron | 30.0% |
| !! | TGTACTGGTTTCATATATGT+CGG | - | chr7.4:44672930-44672949 | MS.gene66060:intron | 30.0% |
| AAATTCACTTACAACACCGA+TGG | - | chr7.4:44672728-44672747 | MS.gene66060:intron | 35.0% | |
| ATCACTTGTATACAGCTTTG+TGG | - | chr7.4:44672607-44672626 | MS.gene66060:CDS | 35.0% | |
| CAATCTTCACTTGACGATTA+AGG | + | chr7.4:44673523-44673542 | None:intergenic | 35.0% | |
| TAGCTATGACACATGGTTTA+TGG | + | chr7.4:44673602-44673621 | None:intergenic | 35.0% | |
| TATGTCTATATTGGATCCTC+TGG | - | chr7.4:44673433-44673452 | MS.gene66060:CDS | 35.0% | |
| TCAATGCAATGCGATATATG+AGG | - | chr7.4:44672841-44672860 | MS.gene66060:intron | 35.0% | |
| TGCATATGCTCCTTCAATTT+CGG | + | chr7.4:44673309-44673328 | None:intergenic | 35.0% | |
| TTTACCAAAAGATATGGTGG+AGG | - | chr7.4:44673133-44673152 | MS.gene66060:intron | 35.0% | |
| TTTGCAGGCACAAGATTTAA+GGG | - | chr7.4:44673873-44673892 | MS.gene66060:CDS | 35.0% | |
| ! | AGCTATTTCAGCAAAGTTTC+CGG | + | chr7.4:44672672-44672691 | None:intergenic | 35.0% |
| ! | CAGTATTATGTTTTCTGCGA+TGG | + | chr7.4:44673653-44673672 | None:intergenic | 35.0% |
| ! | TTTTCCTCCACCATATCTTT+TGG | + | chr7.4:44673140-44673159 | None:intergenic | 35.0% |
| ! | TTTTGATCGCCATATTGCTA+TGG | - | chr7.4:44673084-44673103 | MS.gene66060:intron | 35.0% |
| !!! | TGAATTTTGTGTTGGTTGCT+GGG | + | chr7.4:44672715-44672734 | None:intergenic | 35.0% |
| AACGATCTGTGCTTCAAAGT+CGG | + | chr7.4:44673461-44673480 | None:intergenic | 40.0% | |
| AAGATTTAAGGGGGAATGCA+GGG | - | chr7.4:44673884-44673903 | MS.gene66060:CDS | 40.0% | |
| ACTTGCGAAAGTAAAAGCTC+AGG | - | chr7.4:44673362-44673381 | MS.gene66060:intron | 40.0% | |
| ATAAAAGGACCTGATCACGA+AGG | + | chr7.4:44673571-44673590 | None:intergenic | 40.0% | |
| CAAGAAAGGCCATAGCAATA+TGG | + | chr7.4:44673096-44673115 | None:intergenic | 40.0% | |
| CTCCTTGATGTGATCAAGAA+AGG | + | chr7.4:44673110-44673129 | None:intergenic | 40.0% | |
| CTTTCTTGATCACATCAAGG+AGG | - | chr7.4:44673108-44673127 | MS.gene66060:intron | 40.0% | |
| CTTTGCAGGCACAAGATTTA+AGG | - | chr7.4:44673872-44673891 | MS.gene66060:CDS | 40.0% | |
| GGAGCATATGCAATATTGTG+TGG | - | chr7.4:44673317-44673336 | MS.gene66060:intron | 40.0% | |
| GGCAATTAAGGAGAAAGATG+TGG | - | chr7.4:44673905-44673924 | MS.gene66060:CDS | 40.0% | |
| TCATCACTAGCTATGACACA+TGG | + | chr7.4:44673609-44673628 | None:intergenic | 40.0% | |
| TTGCAGGCACAAGATTTAAG+GGG | - | chr7.4:44673874-44673893 | MS.gene66060:CDS | 40.0% | |
| ! | GTAGTTGAAGGTATGACCAT+CGG | + | chr7.4:44672747-44672766 | None:intergenic | 40.0% |
| !! | GCAAGTACTGAATCCATCAT+GGG | + | chr7.4:44672774-44672793 | None:intergenic | 40.0% |
| !!! | GTGAATTTTGTGTTGGTTGC+TGG | + | chr7.4:44672716-44672735 | None:intergenic | 40.0% |
| AACTGTCAACCTTCGTGATC+AGG | - | chr7.4:44673559-44673578 | MS.gene66060:intron | 45.0% | |
| AGCAAAGTTTCCGGTGAAGT+TGG | + | chr7.4:44672663-44672682 | None:intergenic | 45.0% | |
| CAAAAGACTCCACAGCAACA+AGG | + | chr7.4:44673069-44673088 | None:intergenic | 45.0% | |
| CAAGATTTAAGGGGGAATGC+AGG | - | chr7.4:44673883-44673902 | MS.gene66060:CDS | 45.0% | |
| GCAATGCGATATATGAGGCA+CGG | - | chr7.4:44672846-44672865 | MS.gene66060:intron | 45.0% | |
| GGCCTTTCTTGATCACATCA+AGG | - | chr7.4:44673105-44673124 | MS.gene66060:intron | 45.0% | |
| TCGGACATTGAACACCTCTA+AGG | - | chr7.4:44672949-44672968 | MS.gene66060:intron | 45.0% | |
| TGCAGGCACAAGATTTAAGG+GGG | - | chr7.4:44673875-44673894 | MS.gene66060:CDS | 45.0% | |
| TTGTGTGGAACATCCAGAAG+AGG | - | chr7.4:44673332-44673351 | MS.gene66060:intron | 45.0% | |
| ! | TGGTTTGAATGTGGCTTTGC+AGG | - | chr7.4:44673858-44673877 | MS.gene66060:CDS | 45.0% |
| !! | GCAAGTTTGCTAACCTCTTC+TGG | + | chr7.4:44673348-44673367 | None:intergenic | 45.0% |
| !! | GGCAAGTACTGAATCCATCA+TGG | + | chr7.4:44672775-44672794 | None:intergenic | 45.0% |
| ATCATGGGCGAGGTAGTTGA+AGG | + | chr7.4:44672759-44672778 | None:intergenic | 50.0% | |
| TACTGAATCCATCATGGGCG+AGG | + | chr7.4:44672769-44672788 | None:intergenic | 50.0% | |
| TTCAACTACCTCGCCCATGA+TGG | - | chr7.4:44672758-44672777 | MS.gene66060:intron | 50.0% | |
| ! | AGCTTACTGCCTTGTTGCTG+TGG | - | chr7.4:44673057-44673076 | MS.gene66060:CDS | 50.0% |
| GGGGGAATGCAGGGCAATTA+AGG | - | chr7.4:44673893-44673912 | MS.gene66060:CDS | 55.0% | |
| TGGTTGCTGGGAGTCTTTGC+AGG | + | chr7.4:44672703-44672722 | None:intergenic | 55.0% | |
| ! | GTATACAGCTTTGTGGCGCG+TGG | - | chr7.4:44672614-44672633 | MS.gene66060:CDS | 55.0% |
| ! | TGCTTCAAAGTCGGCTCCAG+AGG | + | chr7.4:44673452-44673471 | None:intergenic | 55.0% |
| !! | TCCGGTGAAGTTGGTGTGCT+CGG | + | chr7.4:44672654-44672673 | None:intergenic | 55.0% |
| GCCGAGCACACCAACTTCAC+CGG | - | chr7.4:44672650-44672669 | MS.gene66060:CDS | 60.0% | |
| ! | CAGCTTTGTGGCGCGTGGCA+CGG | - | chr7.4:44672619-44672638 | MS.gene66060:CDS | 65.0% |
| GGCGCGTGGCACGGTGATTC+TGG | - | chr7.4:44672628-44672647 | MS.gene66060:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.4 | gene | 44672596 | 44674008 | 44672596 | ID=MS.gene66060 |
| chr7.4 | mRNA | 44672596 | 44674008 | 44672596 | ID=MS.gene66060.t1;Parent=MS.gene66060 |
| chr7.4 | exon | 44673819 | 44674008 | 44673819 | ID=MS.gene66060.t1.exon1;Parent=MS.gene66060.t1 |
| chr7.4 | CDS | 44673819 | 44674008 | 44673819 | ID=cds.MS.gene66060.t1;Parent=MS.gene66060.t1 |
| chr7.4 | exon | 44673404 | 44673545 | 44673404 | ID=MS.gene66060.t1.exon2;Parent=MS.gene66060.t1 |
| chr7.4 | CDS | 44673404 | 44673545 | 44673404 | ID=cds.MS.gene66060.t1;Parent=MS.gene66060.t1 |
| chr7.4 | exon | 44673179 | 44673299 | 44673179 | ID=MS.gene66060.t1.exon3;Parent=MS.gene66060.t1 |
| chr7.4 | CDS | 44673179 | 44673299 | 44673179 | ID=cds.MS.gene66060.t1;Parent=MS.gene66060.t1 |
| chr7.4 | exon | 44673024 | 44673086 | 44673024 | ID=MS.gene66060.t1.exon4;Parent=MS.gene66060.t1 |
| chr7.4 | CDS | 44673024 | 44673086 | 44673024 | ID=cds.MS.gene66060.t1;Parent=MS.gene66060.t1 |
| chr7.4 | exon | 44672596 | 44672724 | 44672596 | ID=MS.gene66060.t1.exon5;Parent=MS.gene66060.t1 |
| chr7.4 | CDS | 44672596 | 44672724 | 44672596 | ID=cds.MS.gene66060.t1;Parent=MS.gene66060.t1 |
| Gene Sequence |
| Protein sequence |
