AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene059694


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059694.t1 MTR_8g091390 94.130 477 20 3 1 471 97 571 0.0 898
MS.gene059694.t1 MTR_3g078740 47.648 489 217 10 2 455 90 574 2.20e-154 451
MS.gene059694.t1 MTR_3g078730 48.707 464 202 6 1 455 88 524 3.96e-152 444
MS.gene059694.t1 MTR_3g078700 48.380 463 203 6 2 455 90 525 7.54e-151 441
MS.gene059694.t1 MTR_5g020600 33.811 488 264 18 5 461 100 559 1.19e-61 211
MS.gene059694.t1 MTR_5g020620 32.510 486 272 15 5 461 96 554 5.04e-59 203
MS.gene059694.t1 MTR_5g081810 31.712 473 272 15 1 448 61 507 1.02e-55 194
MS.gene059694.t1 MTR_5g083360 30.894 492 272 18 1 451 86 550 7.03e-53 187
MS.gene059694.t1 MTR_5g069680 30.833 480 268 17 1 448 89 536 4.58e-52 184
MS.gene059694.t1 MTR_3g462760 30.802 474 271 16 3 448 90 534 5.83e-52 184
MS.gene059694.t1 MTR_8g027375 30.801 487 285 16 5 461 100 564 1.41e-50 181
MS.gene059694.t1 MTR_7g062250 31.328 482 264 19 3 444 98 552 3.63e-50 180
MS.gene059694.t1 MTR_7g458880 29.959 484 267 19 5 444 99 554 1.08e-49 179
MS.gene059694.t1 MTR_5g073210 30.040 496 277 16 4 461 90 553 2.13e-49 177
MS.gene059694.t1 MTR_2g008330 30.658 486 271 17 1 448 100 557 1.32e-48 176
MS.gene059694.t1 MTR_7g058690 29.752 484 274 19 5 447 99 557 9.53e-48 173
MS.gene059694.t1 MTR_7g062310 29.084 502 277 21 1 454 109 579 1.12e-47 173
MS.gene059694.t1 MTR_7g060460 30.705 482 267 19 5 444 99 555 2.57e-47 172
MS.gene059694.t1 MTR_3g101640 30.453 486 266 22 4 448 95 549 3.98e-46 169
MS.gene059694.t1 MTR_3g071890 30.021 483 264 20 3 445 97 545 1.56e-45 167
MS.gene059694.t1 MTR_7g065970 28.803 493 273 19 3 449 89 549 1.55e-44 164
MS.gene059694.t1 MTR_7g065980 28.221 489 276 16 5 448 91 549 2.47e-44 164
MS.gene059694.t1 MTR_3g101635 30.309 485 266 20 4 448 92 544 4.75e-44 163
MS.gene059694.t1 MTR_4g019225 29.412 493 271 21 3 449 90 551 2.07e-43 161
MS.gene059694.t1 MTR_4g064530 30.372 484 275 20 5 451 110 568 5.29e-43 160
MS.gene059694.t1 MTR_4g064530 29.574 470 261 21 5 434 110 549 1.65e-36 142
MS.gene059694.t1 MTR_5g018270 27.623 467 262 16 5 449 97 509 2.22e-36 141
MS.gene059694.t1 MTR_3g083440 26.898 461 272 14 5 443 91 508 9.27e-36 139
MS.gene059694.t1 MTR_3g083450 27.115 461 271 15 5 443 92 509 1.32e-35 139
MS.gene059694.t1 MTR_3g083400 26.898 461 272 14 5 443 91 508 2.18e-35 138
MS.gene059694.t1 MTR_3g083390 26.898 461 272 14 5 443 91 508 3.22e-35 138
MS.gene059694.t1 MTR_3g083410 26.681 461 273 15 5 443 55 472 3.27e-35 137
MS.gene059694.t1 MTR_8g479390 28.283 495 273 20 5 471 97 537 5.23e-35 137
MS.gene059694.t1 MTR_3g083430 26.681 461 273 14 5 443 91 508 1.95e-34 135
MS.gene059694.t1 MTR_1g090707 26.464 461 276 17 5 443 90 509 9.61e-34 134
MS.gene059694.t1 MTR_4g048350 27.056 462 262 14 5 443 93 502 1.78e-33 133
MS.gene059694.t1 MTR_3g008580 26.724 464 281 15 5 443 95 524 2.06e-33 133
MS.gene059694.t1 MTR_4g083210 27.609 460 266 16 5 443 91 504 2.21e-33 132
MS.gene059694.t1 MTR_4g049390 27.350 468 254 15 5 443 93 503 2.99e-33 132
MS.gene059694.t1 MTR_4g015120 41.615 161 90 2 288 448 379 535 1.68e-32 130
MS.gene059694.t1 MTR_4g132320 28.085 470 248 18 5 443 97 507 2.53e-32 129
MS.gene059694.t1 MTR_7g051440 28.017 464 273 17 5 443 95 522 4.64e-32 129
MS.gene059694.t1 MTR_2g088080 26.013 469 261 13 5 444 15 426 2.39e-31 125
MS.gene059694.t1 MTR_2g088080 26.013 469 261 13 5 444 96 507 6.83e-31 125
MS.gene059694.t1 MTR_4g101650 28.051 467 275 16 3 443 91 522 1.25e-30 125
MS.gene059694.t1 MTR_3g115050 24.681 470 262 17 7 444 98 507 1.26e-30 124
MS.gene059694.t1 MTR_1g026410 26.652 469 252 17 7 443 97 505 3.27e-30 123
MS.gene059694.t1 MTR_4g083190 24.615 455 290 12 5 443 93 510 3.34e-30 123
MS.gene059694.t1 MTR_4g075690 24.892 462 268 15 7 443 98 505 3.19e-29 120
MS.gene059694.t1 MTR_8g479380 25.482 467 267 17 3 443 93 504 3.53e-27 114
MS.gene059694.t1 MTR_5g081790 40.385 156 84 3 288 440 283 432 2.06e-26 111
MS.gene059694.t1 MTR_3g079660 53.947 76 35 0 380 455 5 80 5.46e-26 102
MS.gene059694.t1 MTR_4g075690 24.500 400 230 12 7 384 98 447 9.05e-22 97.8
MS.gene059694.t1 MTR_2g009230 44.262 61 32 1 43 101 1 61 9.29e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene059694.t1 AT4G39830 65.817 471 147 5 1 457 99 569 0.0 663
MS.gene059694.t1 AT4G39830 65.817 471 147 5 1 457 2 472 0.0 662
MS.gene059694.t1 AT4G39830 65.817 471 147 5 1 457 4 474 0.0 662
MS.gene059694.t1 AT4G39830 63.482 471 145 6 1 457 4 461 0.0 625
MS.gene059694.t1 AT5G21100 47.447 470 234 6 2 461 88 554 1.35e-153 449
MS.gene059694.t1 AT5G21105 48.077 468 229 5 2 457 102 567 1.26e-152 447
MS.gene059694.t1 AT5G21105 46.697 439 220 5 2 428 102 538 1.29e-134 399
MS.gene059694.t1 AT5G21105 47.956 367 179 4 101 457 12 376 5.45e-112 336
MS.gene059694.t1 AT5G03260 33.902 469 260 15 5 448 92 535 2.44e-60 207
MS.gene059694.t1 AT5G58910 31.723 476 271 16 3 448 50 501 1.70e-56 196
MS.gene059694.t1 AT5G58910 31.590 478 273 16 1 448 91 544 2.77e-56 196
MS.gene059694.t1 AT5G58910 31.590 478 273 16 1 448 92 545 2.90e-56 196
MS.gene059694.t1 AT5G05390 30.992 484 269 19 1 448 89 543 4.32e-56 196
MS.gene059694.t1 AT1G18140 31.000 500 266 19 3 451 93 564 8.65e-56 195
MS.gene059694.t1 AT2G38080 31.915 470 276 14 1 448 89 536 2.59e-53 188
MS.gene059694.t1 AT2G46570 29.314 481 272 17 5 448 13 462 5.08e-50 177
MS.gene059694.t1 AT5G48100 31.884 483 263 24 4 448 87 541 1.13e-49 178
MS.gene059694.t1 AT5G01050 28.512 484 275 19 5 448 94 546 1.42e-49 178
MS.gene059694.t1 AT2G46570 29.314 481 272 17 5 448 98 547 2.35e-49 177
MS.gene059694.t1 AT5G09360 32.505 483 258 22 1 448 98 547 2.50e-49 177
MS.gene059694.t1 AT5G01190 30.753 478 273 15 1 448 87 536 5.69e-49 176
MS.gene059694.t1 AT5G01190 30.753 478 273 15 1 448 73 522 6.89e-49 176
MS.gene059694.t1 AT5G60020 30.533 488 264 20 5 444 59 519 5.35e-48 173
MS.gene059694.t1 AT5G07130 29.363 487 274 18 4 448 4 462 8.72e-48 171
MS.gene059694.t1 AT5G07130 29.363 487 274 18 4 448 4 462 8.72e-48 171
MS.gene059694.t1 AT5G60020 30.533 488 264 20 5 444 91 551 9.08e-48 173
MS.gene059694.t1 AT5G07130 29.363 487 274 18 4 448 89 547 3.26e-47 172
MS.gene059694.t1 AT3G09220 29.461 482 278 19 3 448 90 545 4.94e-47 171
MS.gene059694.t1 AT2G30210 30.400 500 277 20 4 461 93 563 6.25e-47 171
MS.gene059694.t1 AT5G01040 28.926 484 271 21 5 448 94 544 1.25e-46 170
MS.gene059694.t1 AT2G29130 29.668 482 267 18 5 444 96 547 2.73e-46 169
MS.gene059694.t1 AT3G09220 29.175 473 273 19 12 448 2 448 3.86e-45 164
MS.gene059694.t1 AT2G40370 28.947 494 275 19 3 448 93 558 5.20e-44 163
MS.gene059694.t1 AT5G60020 29.873 472 256 20 5 428 91 535 9.53e-41 153
MS.gene059694.t1 AT1G75790 29.741 464 253 19 5 443 93 508 4.17e-40 152
MS.gene059694.t1 AT2G23630 27.660 470 249 19 5 443 96 505 9.21e-37 142
MS.gene059694.t1 AT2G23630 27.660 470 249 19 5 443 101 510 1.31e-36 142
MS.gene059694.t1 AT5G66920 26.797 459 266 14 5 443 103 511 1.97e-36 141
MS.gene059694.t1 AT1G55570 27.511 458 274 13 5 443 95 513 2.02e-35 139
MS.gene059694.t1 AT4G22010 27.862 463 259 16 5 443 92 503 9.74e-35 136
MS.gene059694.t1 AT4G12420 28.664 464 272 18 5 443 91 520 5.08e-34 135
MS.gene059694.t1 AT4G12420 28.664 464 272 18 5 443 91 520 5.08e-34 135
MS.gene059694.t1 AT1G21850 27.332 461 257 18 7 443 97 503 2.96e-33 132
MS.gene059694.t1 AT1G76160 26.824 466 258 17 5 443 94 503 3.42e-33 132
MS.gene059694.t1 AT3G13390 26.667 465 271 15 5 444 94 513 1.50e-32 130
MS.gene059694.t1 AT4G28090 27.234 470 251 18 7 443 96 507 2.38e-32 130
MS.gene059694.t1 AT1G21860 25.407 492 286 17 7 471 97 534 1.99e-31 127
MS.gene059694.t1 AT4G37160 26.282 468 263 18 3 443 95 507 5.51e-31 125
MS.gene059694.t1 AT4G25240 26.923 468 274 17 5 443 95 523 5.67e-31 126
MS.gene059694.t1 AT4G25240 26.923 468 274 17 5 443 95 523 5.67e-31 126
MS.gene059694.t1 AT3G13400 25.877 456 283 13 5 443 93 510 8.23e-31 125
MS.gene059694.t1 AT3G13400 25.877 456 283 13 5 443 93 510 8.23e-31 125
MS.gene059694.t1 AT5G51480 26.124 467 280 16 5 443 94 523 8.17e-30 122
MS.gene059694.t1 AT5G48450 26.144 459 280 13 5 443 95 514 8.21e-30 122
MS.gene059694.t1 AT5G48450 26.144 459 280 13 5 443 95 514 1.41e-29 122
MS.gene059694.t1 AT1G41830 23.779 471 266 15 5 443 95 504 1.43e-27 115
MS.gene059694.t1 AT1G55560 25.813 461 277 16 5 443 92 509 1.51e-25 110
MS.gene059694.t1 AT4G38420 25.000 464 272 17 7 443 98 512 6.02e-23 102
MS.gene059694.t1 AT4G37160 24.939 409 226 17 3 384 95 449 2.05e-18 87.8
MS.gene059694.t1 AT4G38420 24.654 434 251 17 7 413 98 482 1.06e-17 85.9
MS.gene059694.t1 AT4G38420 24.691 405 230 16 7 384 98 454 3.07e-15 78.2

Find 105 sgRNAs with CRISPR-Local

Find 189 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GATCGGATAATCCTGGTGTT+TGG 0.257745 4.1:-9971278 MS.gene059694:CDS
CCTCAGTCACTTCTGATTCA+TGG 0.264081 4.1:-9972902 MS.gene059694:intron
CTTCTAGCAATGGAATTTAT+AGG 0.273291 4.1:-9971530 MS.gene059694:CDS
GGCACAGTATTCTTCATAAT+GGG 0.282501 4.1:+9971336 None:intergenic
GGCGACCTCATTGGATGGTT+TGG 0.294439 4.1:+9971876 None:intergenic
CAAAGGGAAGCAGGAGTATA+TGG 0.305522 4.1:-9973190 MS.gene059694:CDS
GAGGTTTGATTGTGTAATTT+TGG 0.312038 4.1:+9971775 None:intergenic
TATAGAGTCTCATTTCTATA+TGG 0.319868 4.1:-9971241 MS.gene059694:CDS
ATCGGATAATCCTGGTGTTT+GGG 0.329948 4.1:-9971277 MS.gene059694:CDS
CATTTGGTTGGACTGCTTTG+AGG 0.330733 4.1:-9971305 MS.gene059694:CDS
CTATCAAAGTCATAAGAAAA+AGG 0.331498 4.1:+9973136 None:intergenic
ATTGGAACTCCTTGGTTTGA+TGG 0.340104 4.1:-9973584 MS.gene059694:CDS
TGCGAAAAGGGAGAGCATTC+AGG 0.359438 4.1:+9972815 None:intergenic
GCGACCTCATTGGATGGTTT+GGG 0.364061 4.1:+9971877 None:intergenic
GGCAAAAGCAAAGGCTTCTT+AGG 0.366890 4.1:-9971151 None:intergenic
TGGCACAGTATTCTTCATAA+TGG 0.366973 4.1:+9971335 None:intergenic
TTTATCGATTTGTTGTTGAT+AGG 0.375099 4.1:-9973514 MS.gene059694:CDS
AGCCATCAGGTGGAGGTGTT+TGG 0.375855 4.1:+9971604 None:intergenic
CTTTAAGTGCAACAAGATAA+GGG 0.376250 4.1:+9971649 None:intergenic
TACCTTTATCATGCTCACTA+TGG 0.386828 4.1:-9973217 MS.gene059694:CDS
GTGATCCAGTAGTTTCTTGA+TGG 0.389887 4.1:+9971960 None:intergenic
TTCCATAGTGAGCATGATAA+AGG 0.395211 4.1:+9973215 None:intergenic
TTAGCACCAAGCTTACTTGC+TGG 0.401503 4.1:-9972857 MS.gene059694:CDS
TCTTTAAGTGCAACAAGATA+AGG 0.407309 4.1:+9971648 None:intergenic
GCACTTAAAGAGAATATAAC+TGG 0.408038 4.1:-9971636 MS.gene059694:CDS
ATTGTTCATAAGTACTCTTA+TGG 0.412906 4.1:+9973089 None:intergenic
GGTGGAGATGGTGGAGATGT+TGG 0.421057 4.1:+9971852 None:intergenic
GAGACGACTGTTTGCGAAAA+GGG 0.423092 4.1:+9972803 None:intergenic
GTTTCTGCTGACAACATTTG+AGG 0.423513 4.1:+9971938 None:intergenic
CTTCAACAACAGTCATGTTA+TGG 0.433837 4.1:+9972075 None:intergenic
ACACATCCATGGCATCTTCA+TGG 0.435000 4.1:-9971438 MS.gene059694:CDS
CAAATGTTGTCAGCAGAAAC+AGG 0.442581 4.1:-9971935 MS.gene059694:CDS
TCCACCATCTCCACCAGCTT+GGG 0.443905 4.1:-9971844 MS.gene059694:CDS
ATAGAGTCTCATTTCTATAT+GGG 0.445190 4.1:-9971240 MS.gene059694:CDS
TAGAGATTCTTAACCACAAA+AGG 0.447645 4.1:+9972032 None:intergenic
ACTCTATCTGAGGTTGTTGG+AGG 0.454902 4.1:+9971756 None:intergenic
CTATAGACGGTGTTCGTCAT+TGG 0.461142 4.1:-9971707 MS.gene059694:CDS
TTATCGATTTGTTGTTGATA+GGG 0.462550 4.1:-9973513 MS.gene059694:intron
CTCCACCATCTCCACCAGCT+TGG 0.463071 4.1:-9971845 MS.gene059694:CDS
AGGACAACCCCGCCTGGTTT+AGG 0.465849 4.1:-9971915 MS.gene059694:CDS
TTTCTATATGGGAATGGGAG+TGG 0.472301 4.1:-9971229 MS.gene059694:CDS
TGGGTACTTGGATATGGAAA+GGG 0.475912 4.1:-9971405 MS.gene059694:CDS
TCACTTCTGATTCATGGAAA+AGG 0.477199 4.1:-9972896 MS.gene059694:CDS
TCTCATTTCTATATGGGAAT+GGG 0.493176 4.1:-9971234 MS.gene059694:CDS
AGGTTTCGATCGGATAATCC+TGG 0.493226 4.1:-9971285 MS.gene059694:CDS
GTCTCATTTCTATATGGGAA+TGG 0.494997 4.1:-9971235 MS.gene059694:CDS
TGAGACGACTGTTTGCGAAA+AGG 0.496730 4.1:+9972802 None:intergenic
GACTGCTTTGAGGTTTCGAT+CGG 0.497349 4.1:-9971295 MS.gene059694:CDS
TATGGAATGCAAAGGGAAGC+AGG 0.500152 4.1:-9973199 MS.gene059694:CDS
ATGACTCTATCTGAGGTTGT+TGG 0.501248 4.1:+9971753 None:intergenic
TGCCAGTGCACTCATTTGGT+TGG 0.501895 4.1:-9971317 MS.gene059694:CDS
AGTACTTATGAACAATCTGC+TGG 0.505703 4.1:-9973082 MS.gene059694:CDS
GAAGCTACCTTCATCCATCA+TGG 0.509505 4.1:-9971179 MS.gene059694:CDS
TTTGGTGAGCTTTGATTGCA+AGG 0.510484 4.1:+9971793 None:intergenic
TTGGGTACTTGGATATGGAA+AGG 0.514165 4.1:-9971406 MS.gene059694:CDS
GACTCAACATTGTCCCAAGC+TGG 0.516390 4.1:+9971831 None:intergenic
TGATCCAGTAGTTTCTTGAT+GGG 0.518958 4.1:+9971961 None:intergenic
ACTGTGCCAGTGCACTCATT+TGG 0.524117 4.1:-9971321 MS.gene059694:CDS
GATGTTGGTGGCGACCTCAT+TGG 0.527521 4.1:+9971867 None:intergenic
CAAGATAAGGGGTGTGAGGT+AGG 0.528066 4.1:+9971661 None:intergenic
CGATAAACAAAGGTGTCTCC+AGG 0.528939 4.1:+9973530 None:intergenic
CCTTCATCCATCATGGGTTG+TGG 0.536511 4.1:-9971172 MS.gene059694:CDS
TGCTCACTATGGAATGCAAA+GGG 0.536716 4.1:-9973206 MS.gene059694:CDS
CCTTGGTTTGATGGAACAGA+AGG 0.537286 4.1:-9973575 MS.gene059694:CDS
AAGACCCATCAAGAAACTAC+TGG 0.542638 4.1:-9971965 MS.gene059694:CDS
TTATTAAAATCATAGCCATC+AGG 0.546504 4.1:+9971591 None:intergenic
TATGACAGATTGGAACTCCT+TGG 0.549024 4.1:-9973592 None:intergenic
GGAGATGGTGGAGATGTTGG+TGG 0.552505 4.1:+9971855 None:intergenic
TGAAGAAGGAATTGAAAGGG+TGG 0.555608 4.1:-9971202 MS.gene059694:CDS
ACAAATGCTACTTCTAGCAA+TGG 0.556255 4.1:-9971540 MS.gene059694:CDS
AGAAACAGGACAACCCCGCC+TGG 0.556484 4.1:-9971921 MS.gene059694:CDS
CCACAACCCATGATGGATGA+AGG 0.564653 4.1:+9971172 None:intergenic
TTGGTGGCGACCTCATTGGA+TGG 0.568529 4.1:+9971871 None:intergenic
CAAACACCAGCAAGTAAGCT+TGG 0.572447 4.1:+9972851 None:intergenic
ATGGGTTGTGGCAAAAGCAA+AGG 0.574548 4.1:-9971160 MS.gene059694:CDS
ATGCTCACTATGGAATGCAA+AGG 0.577390 4.1:-9973207 MS.gene059694:CDS
TTGTCCCAAGCTGGTGGAGA+TGG 0.577934 4.1:+9971840 None:intergenic
TCATGTCCATGAAGATGCCA+TGG 0.579018 4.1:+9971432 None:intergenic
CAATGAAAAGCCCAAACACC+AGG 0.582233 4.1:+9971267 None:intergenic
AAATCATAGCCATCAGGTGG+AGG 0.584412 4.1:+9971597 None:intergenic
TCTCAATGTCCTATACTACC+TGG 0.584728 4.1:-9973548 MS.gene059694:CDS
AAGGTGTCTCCAGGTAGTAT+AGG 0.588687 4.1:+9973539 None:intergenic
ATGACTGTTGTTGAAGCAGA+TGG 0.592854 4.1:-9972068 MS.gene059694:CDS
AAGCTACCTTCATCCATCAT+GGG 0.594823 4.1:-9971178 MS.gene059694:CDS
GTCCAACCAAATGAGTGCAC+TGG 0.595748 4.1:+9971315 None:intergenic
GAAGAAGGAATTGAAAGGGT+GGG 0.596762 4.1:-9971201 MS.gene059694:CDS
AAGAATCTCTACATATACTC+AGG 0.600439 4.1:-9972020 MS.gene059694:CDS
TCAACATTGTCCCAAGCTGG+TGG 0.600784 4.1:+9971834 None:intergenic
AACCAAACACCTCCACCTGA+TGG 0.600941 4.1:-9971606 MS.gene059694:CDS
AACACACAAAACACTATAGA+CGG 0.600946 4.1:-9971720 MS.gene059694:CDS
CTTGGTTTGATGGAACAGAA+GGG 0.602438 4.1:-9973574 MS.gene059694:CDS
CAAAACTATGACTCTATCTG+AGG 0.612834 4.1:+9971746 None:intergenic
TTGGTTTGATGGAACAGAAG+GGG 0.617644 4.1:-9973573 MS.gene059694:CDS
TCCCAAGCTGGTGGAGATGG+TGG 0.622614 4.1:+9971843 None:intergenic
GCATGATAAAGGTATGTACC+AGG 0.623377 4.1:+9973226 None:intergenic
TTTAAGTGCAACAAGATAAG+GGG 0.625406 4.1:+9971650 None:intergenic
AACAACAAATCGATAAACAA+AGG 0.630677 4.1:+9973520 None:intergenic
ATAATAGTGAGACACATCCA+TGG 0.633125 4.1:-9971449 MS.gene059694:CDS
GCACAGTATTCTTCATAATG+GGG 0.640153 4.1:+9971337 None:intergenic
TTAAAATCATAGCCATCAGG+TGG 0.640896 4.1:+9971594 None:intergenic
GCAACAAGATAAGGGGTGTG+AGG 0.654315 4.1:+9971657 None:intergenic
CCTTCTGTTCCATCAAACCA+AGG 0.691723 4.1:+9973575 None:intergenic
ACTACCCAAACCATCCAATG+AGG 0.700116 4.1:-9971881 MS.gene059694:CDS
GCTGAAGTTCAATACAACTG+TGG 0.701274 4.1:-9971508 MS.gene059694:CDS
AGTATATGGAATGATTCGTG+TGG 0.709085 4.1:-9973176 MS.gene059694:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! CATAAAAATTATATCTAATT+TGG - chr4.1:9971467-9971486 MS.gene059694:CDS 10.0%
!!! TATTGTTTCTTTGTATATTT+GGG - chr4.1:9971808-9971827 MS.gene059694:CDS 15.0%
!!! TCACCAAATTATAATTTTTT+GGG + chr4.1:9973378-9973397 None:intergenic 15.0%
!!! TTATTGTTTCTTTGTATATT+TGG - chr4.1:9971807-9971826 MS.gene059694:CDS 15.0%
!!! TTCACCAAATTATAATTTTT+TGG + chr4.1:9973379-9973398 None:intergenic 15.0%
!! AGACCCAAAAAATTATAATT+TGG - chr4.1:9973372-9973391 MS.gene059694:intron 20.0%
!! ATATTATTGAACCACAATTT+AGG - chr4.1:9972370-9972389 MS.gene059694:intron 20.0%
!! TATTATTGAACCACAATTTA+GGG - chr4.1:9972371-9972390 MS.gene059694:intron 20.0%
!! TTAAAGCTTCAATAAAATCA+TGG + chr4.1:9971312-9971331 None:intergenic 20.0%
!! TTGTAAATTGTAATAATGCA+GGG - chr4.1:9972638-9972657 MS.gene059694:intron 20.0%
!! TTTGTAAATTGTAATAATGC+AGG - chr4.1:9972637-9972656 MS.gene059694:intron 20.0%
!!! AATTAAACGAGGTTAAATTT+TGG + chr4.1:9972580-9972599 None:intergenic 20.0%
!!! ATCATTCAAGTTTTTAAACA+AGG - chr4.1:9972053-9972072 MS.gene059694:CDS 20.0%
! AACAACAAATCGATAAACAA+AGG + chr4.1:9971219-9971238 None:intergenic 25.0%
! AATGAATGATTACCTCTATT+TGG + chr4.1:9972015-9972034 None:intergenic 25.0%
! ATAGAGTCTCATTTCTATAT+GGG - chr4.1:9973496-9973515 MS.gene059694:intron 25.0%
! ATTGTTCATAAGTACTCTTA+TGG + chr4.1:9971650-9971669 None:intergenic 25.0%
! CACAACAATGTTGTAAAAAT+CGG - chr4.1:9972122-9972141 MS.gene059694:intron 25.0%
! CTATCAAAGTCATAAGAAAA+AGG + chr4.1:9971603-9971622 None:intergenic 25.0%
! TATAGAGTCTCATTTCTATA+TGG - chr4.1:9973495-9973514 MS.gene059694:intron 25.0%
! TTATTAAAATCATAGCCATC+AGG + chr4.1:9973148-9973167 None:intergenic 25.0%
!! TAATTATGATATTTTCAGCG+TGG - chr4.1:9973165-9973184 MS.gene059694:CDS 25.0%
!!! GAAGCATTATTTTGAATGAT+TGG - chr4.1:9971622-9971641 MS.gene059694:CDS 25.0%
!!! GGTTAAATTTTGGTAATAGT+CGG + chr4.1:9972570-9972589 None:intergenic 25.0%
!!! GTTAAATTTTGGTAATAGTC+GGG + chr4.1:9972569-9972588 None:intergenic 25.0%
!!! TTATCGATTTGTTGTTGATA+GGG - chr4.1:9971223-9971242 MS.gene059694:CDS 25.0%
!!! TTTATCGATTTGTTGTTGAT+AGG - chr4.1:9971222-9971241 MS.gene059694:CDS 25.0%
!!! TTTTGAAGAAGGAATTGAAA+GGG - chr4.1:9973531-9973550 MS.gene059694:CDS 25.0%
!!! TTTTTGAAGAAGGAATTGAA+AGG - chr4.1:9973530-9973549 MS.gene059694:CDS 25.0%
AAACATGTCAAAACTAGTTC+TGG + chr4.1:9972620-9972639 None:intergenic 30.0%
AACACACAAAACACTATAGA+CGG - chr4.1:9973016-9973035 MS.gene059694:intron 30.0%
AACCAGATGTAAGAATTAGA+TGG - chr4.1:9971709-9971728 MS.gene059694:CDS 30.0%
AAGAATCTCTACATATACTC+AGG - chr4.1:9972716-9972735 MS.gene059694:intron 30.0%
AAGTCATAAGAAAAAGGTTC+AGG + chr4.1:9971597-9971616 None:intergenic 30.0%
ACATATTTAATGTTACAGCC+TGG - chr4.1:9971492-9971511 MS.gene059694:CDS 30.0%
AGAGTGAGAAAAATTAAACG+AGG + chr4.1:9972591-9972610 None:intergenic 30.0%
AGTCATAAGAAAAAGGTTCA+GGG + chr4.1:9971596-9971615 None:intergenic 30.0%
ATCCATCTAATTCTTACATC+TGG + chr4.1:9971714-9971733 None:intergenic 30.0%
CTTCTAGCAATGGAATTTAT+AGG - chr4.1:9973206-9973225 MS.gene059694:CDS 30.0%
CTTTAAGTGCAACAAGATAA+GGG + chr4.1:9973090-9973109 None:intergenic 30.0%
GCACTTAAAGAGAATATAAC+TGG - chr4.1:9973100-9973119 MS.gene059694:CDS 30.0%
GTGTTGAAATTGAAAAGCAA+TGG + chr4.1:9971416-9971435 None:intergenic 30.0%
TAGAGATTCTTAACCACAAA+AGG + chr4.1:9972707-9972726 None:intergenic 30.0%
TAGTTAAAAATGCCTAAACC+AGG + chr4.1:9972836-9972855 None:intergenic 30.0%
TCTCATTTCTATATGGGAAT+GGG - chr4.1:9973502-9973521 MS.gene059694:intron 30.0%
TCTTTAAGTGCAACAAGATA+AGG + chr4.1:9973091-9973110 None:intergenic 30.0%
TGTTTGATCAACAGTGAATT+TGG + chr4.1:9971377-9971396 None:intergenic 30.0%
TTCTTCAATTGTCTAATTGC+TGG - chr4.1:9971782-9971801 MS.gene059694:CDS 30.0%
TTTAAGTGCAACAAGATAAG+GGG + chr4.1:9973089-9973108 None:intergenic 30.0%
! ATCTTCATGGACATGATTTT+TGG - chr4.1:9973311-9973330 MS.gene059694:intron 30.0%
! CATGGTTCAATTGGTTTAAT+CGG + chr4.1:9972415-9972434 None:intergenic 30.0%
! GAGGTTTGATTGTGTAATTT+TGG + chr4.1:9972964-9972983 None:intergenic 30.0%
! TCTTCATGGACATGATTTTT+GGG - chr4.1:9973312-9973331 MS.gene059694:intron 30.0%
! TTTTTATAAAGAAGCCAGAC+TGG + chr4.1:9972272-9972291 None:intergenic 30.0%
AATGACTACGACTACCATTA+AGG - chr4.1:9972498-9972517 MS.gene059694:intron 35.0%
AGCACTTAGTTTCCAAATAG+AGG - chr4.1:9972000-9972019 MS.gene059694:CDS 35.0%
AGTACTTATGAACAATCTGC+TGG - chr4.1:9971654-9971673 MS.gene059694:CDS 35.0%
AGTATATGGAATGATTCGTG+TGG - chr4.1:9971560-9971579 MS.gene059694:CDS 35.0%
ATAATAGTGAGACACATCCA+TGG - chr4.1:9973287-9973306 MS.gene059694:intron 35.0%
CAAAACTATGACTCTATCTG+AGG + chr4.1:9972993-9973012 None:intergenic 35.0%
CAATGTGATCAAAACTAGAC+CGG + chr4.1:9972464-9972483 None:intergenic 35.0%
CAGTGAATTTGGCAAAATCA+TGG + chr4.1:9971366-9971385 None:intergenic 35.0%
CTTCAACAACAGTCATGTTA+TGG + chr4.1:9972664-9972683 None:intergenic 35.0%
GCACAGTATTCTTCATAATG+GGG + chr4.1:9973402-9973421 None:intergenic 35.0%
GGCACAGTATTCTTCATAAT+GGG + chr4.1:9973403-9973422 None:intergenic 35.0%
GTCTCATTTCTATATGGGAA+TGG - chr4.1:9973501-9973520 MS.gene059694:intron 35.0%
TACCTTTATCATGCTCACTA+TGG - chr4.1:9971519-9971538 MS.gene059694:CDS 35.0%
TCACTTCTGATTCATGGAAA+AGG - chr4.1:9971840-9971859 MS.gene059694:CDS 35.0%
TGATCCAGTAGTTTCTTGAT+GGG + chr4.1:9972778-9972797 None:intergenic 35.0%
TGGCACAGTATTCTTCATAA+TGG + chr4.1:9973404-9973423 None:intergenic 35.0%
TGTGCATACATCAAAAACCA+TGG + chr4.1:9972106-9972125 None:intergenic 35.0%
TTAAAAATGCCTAAACCAGG+CGG + chr4.1:9972833-9972852 None:intergenic 35.0%
TTAAAATCATAGCCATCAGG+TGG + chr4.1:9973145-9973164 None:intergenic 35.0%
TTCCATAGTGAGCATGATAA+AGG + chr4.1:9971524-9971543 None:intergenic 35.0%
! ACAAATGCTACTTCTAGCAA+TGG - chr4.1:9973196-9973215 MS.gene059694:CDS 35.0%
! ACACTATGTTGATCCTTTTG+TGG - chr4.1:9972691-9972710 MS.gene059694:intron 35.0%
! CTTTTGGATCATGGTTCAAT+TGG + chr4.1:9972424-9972443 None:intergenic 35.0%
! GAACCACAATTTAGGGTTAA+GGG - chr4.1:9972378-9972397 MS.gene059694:intron 35.0%
! GTCTGCAATTCCTTTTCAAT+GGG - chr4.1:9971680-9971699 MS.gene059694:CDS 35.0%
! TGAACCACAATTTAGGGTTA+AGG - chr4.1:9972377-9972396 MS.gene059694:intron 35.0%
! TGTCTGCAATTCCTTTTCAA+TGG - chr4.1:9971679-9971698 MS.gene059694:CDS 35.0%
!!! GATTTTTGGGTACTTGGATA+TGG - chr4.1:9973325-9973344 MS.gene059694:intron 35.0%
AACTGCGTTTCAACCACAAT+TGG - chr4.1:9972241-9972260 MS.gene059694:intron 40.0%
AAGACCCATCAAGAAACTAC+TGG - chr4.1:9972771-9972790 MS.gene059694:CDS 40.0%
AAGCTACCTTCATCCATCAT+GGG - chr4.1:9973558-9973577 MS.gene059694:CDS 40.0%
AGAATCGTATGTGACTGATG+TGG + chr4.1:9972524-9972543 None:intergenic 40.0%
ATCGGATAATCCTGGTGTTT+GGG - chr4.1:9973459-9973478 MS.gene059694:intron 40.0%
ATGACTGTTGTTGAAGCAGA+TGG - chr4.1:9972668-9972687 MS.gene059694:intron 40.0%
ATGCTCACTATGGAATGCAA+AGG - chr4.1:9971529-9971548 MS.gene059694:CDS 40.0%
CAAATGTTGTCAGCAGAAAC+AGG - chr4.1:9972801-9972820 MS.gene059694:CDS 40.0%
CATGAATCAGAAGTGACTGA+GGG + chr4.1:9971836-9971855 None:intergenic 40.0%
GAAAAAGGTTCAGGGTCATT+AGG + chr4.1:9971588-9971607 None:intergenic 40.0%
GAAGAAGGAATTGAAAGGGT+GGG - chr4.1:9973535-9973554 MS.gene059694:CDS 40.0%
GCTGAAGTTCAATACAACTG+TGG - chr4.1:9973228-9973247 MS.gene059694:CDS 40.0%
GTGATCCAGTAGTTTCTTGA+TGG + chr4.1:9972779-9972798 None:intergenic 40.0%
GTTTCTGCTGACAACATTTG+AGG + chr4.1:9972801-9972820 None:intergenic 40.0%
TAAAAATGCCTAAACCAGGC+GGG + chr4.1:9972832-9972851 None:intergenic 40.0%
TAATCTCAGTTGAGACACCA+TGG - chr4.1:9972086-9972105 MS.gene059694:intron 40.0%
TCTCAATGTCCTATACTACC+TGG - chr4.1:9971188-9971207 MS.gene059694:CDS 40.0%
TGAAGAAGGAATTGAAAGGG+TGG - chr4.1:9973534-9973553 MS.gene059694:CDS 40.0%
TGACCCTTAACCCTAAATTG+TGG + chr4.1:9972384-9972403 None:intergenic 40.0%
TGCTCACTATGGAATGCAAA+GGG - chr4.1:9971530-9971549 MS.gene059694:CDS 40.0%
TGGGTACTTGGATATGGAAA+GGG - chr4.1:9973331-9973350 MS.gene059694:intron 40.0%
TTGGGTACTTGGATATGGAA+AGG - chr4.1:9973330-9973349 MS.gene059694:intron 40.0%
TTTCTATATGGGAATGGGAG+TGG - chr4.1:9973507-9973526 MS.gene059694:intron 40.0%
! AATTCCTTTTCAATGGGTGG+GGG - chr4.1:9971686-9971705 MS.gene059694:CDS 40.0%
! ATGACTCTATCTGAGGTTGT+TGG + chr4.1:9972986-9973005 None:intergenic 40.0%
! ATTGGAACTCCTTGGTTTGA+TGG - chr4.1:9971152-9971171 MS.gene059694:CDS 40.0%
! CAATTCCTTTTCAATGGGTG+GGG - chr4.1:9971685-9971704 MS.gene059694:CDS 40.0%
! CAATTTAGGGTTAAGGGTCA+AGG - chr4.1:9972384-9972403 MS.gene059694:intron 40.0%
! CTTGGTTTGATGGAACAGAA+GGG - chr4.1:9971162-9971181 MS.gene059694:CDS 40.0%
! GATCAAACGAGTGAGACTTT+TGG + chr4.1:9972440-9972459 None:intergenic 40.0%
! GCAATTCCTTTTCAATGGGT+GGG - chr4.1:9971684-9971703 MS.gene059694:CDS 40.0%
! GCATGATAAAGGTATGTACC+AGG + chr4.1:9971513-9971532 None:intergenic 40.0%
! TGCAATTCCTTTTCAATGGG+TGG - chr4.1:9971683-9971702 MS.gene059694:CDS 40.0%
! TTGGTTTGATGGAACAGAAG+GGG - chr4.1:9971163-9971182 MS.gene059694:CDS 40.0%
! TTTGGTGAGCTTTGATTGCA+AGG + chr4.1:9972946-9972965 None:intergenic 40.0%
!! ATGGGAGTGGTTTTTGAAGA+AGG - chr4.1:9973520-9973539 MS.gene059694:CDS 40.0%
!! CTGGTTCTATCGGTTCTATA+GGG + chr4.1:9972217-9972236 None:intergenic 40.0%
!!! GGACATGATTTTTGGGTACT+TGG - chr4.1:9973319-9973338 MS.gene059694:intron 40.0%
AAAAATGCCTAAACCAGGCG+GGG + chr4.1:9972831-9972850 None:intergenic 45.0%
AAATCATAGCCATCAGGTGG+AGG + chr4.1:9973142-9973161 None:intergenic 45.0%
ACACATCCATGGCATCTTCA+TGG - chr4.1:9973298-9973317 MS.gene059694:intron 45.0%
ACTACCCAAACCATCCAATG+AGG - chr4.1:9972855-9972874 MS.gene059694:CDS 45.0%
AGGTTTCGATCGGATAATCC+TGG - chr4.1:9973451-9973470 MS.gene059694:intron 45.0%
AGTCTCACTCGTTTGATCAC+CGG - chr4.1:9972442-9972461 MS.gene059694:intron 45.0%
CAAACACCAGCAAGTAAGCT+TGG + chr4.1:9971888-9971907 None:intergenic 45.0%
CAATGAAAAGCCCAAACACC+AGG + chr4.1:9973472-9973491 None:intergenic 45.0%
CATTTGGTTGGACTGCTTTG+AGG - chr4.1:9973431-9973450 MS.gene059694:intron 45.0%
CCATGAATCAGAAGTGACTG+AGG + chr4.1:9971837-9971856 None:intergenic 45.0%
CCTATAGAACCGATAGAACC+AGG - chr4.1:9972215-9972234 MS.gene059694:intron 45.0%
CCTCAGTCACTTCTGATTCA+TGG - chr4.1:9971834-9971853 MS.gene059694:CDS 45.0%
CCTTCTGTTCCATCAAACCA+AGG + chr4.1:9971164-9971183 None:intergenic 45.0%
CTATAGACGGTGTTCGTCAT+TGG - chr4.1:9973029-9973048 MS.gene059694:intron 45.0%
CTGCAAGTGTGAATTGTCTG+CGG + chr4.1:9972194-9972213 None:intergenic 45.0%
GAAGCTACCTTCATCCATCA+TGG - chr4.1:9973557-9973576 MS.gene059694:CDS 45.0%
GAGACGACTGTTTGCGAAAA+GGG + chr4.1:9971936-9971955 None:intergenic 45.0%
GATCGGATAATCCTGGTGTT+TGG - chr4.1:9973458-9973477 MS.gene059694:intron 45.0%
GTTGTAAAAATCGGACCGAC+TGG - chr4.1:9972131-9972150 MS.gene059694:intron 45.0%
TATGGAATGCAAAGGGAAGC+AGG - chr4.1:9971537-9971556 MS.gene059694:CDS 45.0%
TCATGTCCATGAAGATGCCA+TGG + chr4.1:9973307-9973326 None:intergenic 45.0%
TGAGACGACTGTTTGCGAAA+AGG + chr4.1:9971937-9971956 None:intergenic 45.0%
TGGTTTCCAGTGAAACCAGT+CGG + chr4.1:9972149-9972168 None:intergenic 45.0%
TTAGCACCAAGCTTACTTGC+TGG - chr4.1:9971879-9971898 MS.gene059694:CDS 45.0%
! AAGGTGTCTCCAGGTAGTAT+AGG + chr4.1:9971200-9971219 None:intergenic 45.0%
! ACTCTATCTGAGGTTGTTGG+AGG + chr4.1:9972983-9973002 None:intergenic 45.0%
! ATGGGTTGTGGCAAAAGCAA+AGG - chr4.1:9973576-9973595 MS.gene059694:CDS 45.0%
! CAAAGGGAAGCAGGAGTATA+TGG - chr4.1:9971546-9971565 MS.gene059694:CDS 45.0%
! CACAATTGGTTCAACCAGTC+TGG - chr4.1:9972255-9972274 MS.gene059694:intron 45.0%
! CAGACTGGTTGAACCAATTG+TGG + chr4.1:9972257-9972276 None:intergenic 45.0%
! CCTTGGTTTGATGGAACAGA+AGG - chr4.1:9971161-9971180 MS.gene059694:CDS 45.0%
! CGAGTGAGACTTTTGGATCA+TGG + chr4.1:9972433-9972452 None:intergenic 45.0%
! TGTGACTGATGTGGCCTTAA+TGG + chr4.1:9972515-9972534 None:intergenic 45.0%
! TTTTCGCAAACAGTCGTCTC+AGG - chr4.1:9971936-9971955 MS.gene059694:CDS 45.0%
!! CCTGGTTCTATCGGTTCTAT+AGG + chr4.1:9972218-9972237 None:intergenic 45.0%
!! CGATAAACAAAGGTGTCTCC+AGG + chr4.1:9971209-9971228 None:intergenic 45.0%
!! GACTGCTTTGAGGTTTCGAT+CGG - chr4.1:9973441-9973460 MS.gene059694:intron 45.0%
!! GCAGTTCAACCTGGTTCTAT+CGG + chr4.1:9972227-9972246 None:intergenic 45.0%
AAACCAGCTGGTGCAACACA+TGG - chr4.1:9972163-9972182 MS.gene059694:intron 50.0%
AACCAAACACCTCCACCTGA+TGG - chr4.1:9973130-9973149 MS.gene059694:CDS 50.0%
ACTGTGCCAGTGCACTCATT+TGG - chr4.1:9973415-9973434 MS.gene059694:intron 50.0%
GACTCAACATTGTCCCAAGC+TGG + chr4.1:9972908-9972927 None:intergenic 50.0%
GCGACCTCATTGGATGGTTT+GGG + chr4.1:9972862-9972881 None:intergenic 50.0%
GGTTGAAACGCAGTTCAACC+TGG + chr4.1:9972236-9972255 None:intergenic 50.0%
GTCCAACCAAATGAGTGCAC+TGG + chr4.1:9973424-9973443 None:intergenic 50.0%
TCAACATTGTCCCAAGCTGG+TGG + chr4.1:9972905-9972924 None:intergenic 50.0%
TGCCAGTGCACTCATTTGGT+TGG - chr4.1:9973419-9973438 MS.gene059694:intron 50.0%
TGGTTTCACTGGAAACCAGC+TGG - chr4.1:9972151-9972170 MS.gene059694:intron 50.0%
! CAAGATAAGGGGTGTGAGGT+AGG + chr4.1:9973078-9973097 None:intergenic 50.0%
! CCTTCATCCATCATGGGTTG+TGG - chr4.1:9973564-9973583 MS.gene059694:CDS 50.0%
! GCAACAAGATAAGGGGTGTG+AGG + chr4.1:9973082-9973101 None:intergenic 50.0%
! GCTTTTGCCACAACCCATGA+TGG + chr4.1:9973574-9973593 None:intergenic 50.0%
!! CCACAACCCATGATGGATGA+AGG + chr4.1:9973567-9973586 None:intergenic 50.0%
!! TGCGAAAAGGGAGAGCATTC+AGG + chr4.1:9971924-9971943 None:intergenic 50.0%
GAACCATGTGTTGCACCAGC+TGG + chr4.1:9972169-9972188 None:intergenic 55.0%
GGCGACCTCATTGGATGGTT+TGG + chr4.1:9972863-9972882 None:intergenic 55.0%
GGTTCCCCCACCCATTGAAA+AGG + chr4.1:9971693-9971712 None:intergenic 55.0%
TCCACCATCTCCACCAGCTT+GGG - chr4.1:9972892-9972911 MS.gene059694:CDS 55.0%
TTGTCCCAAGCTGGTGGAGA+TGG + chr4.1:9972899-9972918 None:intergenic 55.0%
!! AGCCATCAGGTGGAGGTGTT+TGG + chr4.1:9973135-9973154 None:intergenic 55.0%
!! ATCGGACCGACTGGTTTCAC+TGG - chr4.1:9972140-9972159 MS.gene059694:intron 55.0%
!! GATGTTGGTGGCGACCTCAT+TGG + chr4.1:9972872-9972891 None:intergenic 55.0%
!! GGAGATGGTGGAGATGTTGG+TGG + chr4.1:9972884-9972903 None:intergenic 55.0%
!! GGTGGAGATGGTGGAGATGT+TGG + chr4.1:9972887-9972906 None:intergenic 55.0%
!! TTGGTGGCGACCTCATTGGA+TGG + chr4.1:9972868-9972887 None:intergenic 55.0%
AGAAACAGGACAACCCCGCC+TGG - chr4.1:9972815-9972834 MS.gene059694:CDS 60.0%
AGGACAACCCCGCCTGGTTT+AGG - chr4.1:9972821-9972840 MS.gene059694:CDS 60.0%
CTCCACCATCTCCACCAGCT+TGG - chr4.1:9972891-9972910 MS.gene059694:CDS 60.0%
TCCCAAGCTGGTGGAGATGG+TGG + chr4.1:9972896-9972915 None:intergenic 60.0%


Chromosome Type Strat End Strand Name
chr4.1 gene 9971152 9973606 9971152 ID=MS.gene059694
chr4.1 mRNA 9971152 9973606 9971152 ID=MS.gene059694.t1;Parent=MS.gene059694
chr4.1 exon 9973514 9973606 9973514 ID=MS.gene059694.t1.exon1;Parent=MS.gene059694.t1
chr4.1 CDS 9973514 9973606 9973514 ID=cds.MS.gene059694.t1;Parent=MS.gene059694.t1
chr4.1 exon 9973042 9973248 9973042 ID=MS.gene059694.t1.exon2;Parent=MS.gene059694.t1
chr4.1 CDS 9973042 9973248 9973042 ID=cds.MS.gene059694.t1;Parent=MS.gene059694.t1
chr4.1 exon 9972751 9972918 9972751 ID=MS.gene059694.t1.exon3;Parent=MS.gene059694.t1
chr4.1 CDS 9972751 9972918 9972751 ID=cds.MS.gene059694.t1;Parent=MS.gene059694.t1
chr4.1 exon 9971152 9972099 9971152 ID=MS.gene059694.t1.exon4;Parent=MS.gene059694.t1
chr4.1 CDS 9971152 9972099 9971152 ID=cds.MS.gene059694.t1;Parent=MS.gene059694.t1
Gene Sequence

>MS.gene059694

ATTGGAACTCCTTGGTTTGATGGAACAGAAGGGGTGTCTCAATGTCCTATACTACCTGGAGACACCTTTGTTTATCGATTTGTTGTTGATAGGGTAAGTTGTCAAAATGAAAAGATGAATGAATTCGTGCATGTTTAGAATCAATATGAGTTTGAGACCATGATTTTATTGAAGCTTTAAAGTGTAGTTTTCGTCAAATCTTAGTGACACACCATGATTTTGCCAAATTCACTGTTGATCAAACATGATCTATTCATTGATCCATTGCTTTTCAATTTCAACACTAACAAACAATATTTATATAATCAATCATAGCATAAAAATTATATCTAATTTGGTTACATATTTAATGTTACAGCCTGGTACATACCTTTATCATGCTCACTATGGAATGCAAAGGGAAGCAGGAGTATATGGAATGATTCGTGTGGCACCTAATGACCCTGAACCTTTTTCTTATGACTTTGATAGAAGCATTATTTTGAATGATTGGTACCATAAGAGTACTTATGAACAATCTGCTGGATTGTCTGCAATTCCTTTTCAATGGGTGGGGGAACCAGATGTAAGAATTAGATGGATATACTAATCAGAAAAATACAAATTCAAAATCTTATATCTTAATTATCTTTCTTCAATTGTCTAATTGCTGGTTTTATTGTTTCTTTGTATATTTGGGTTCCCTCAGTCACTTCTGATTCATGGAAAAGGAAGATACAACTGTTCGTTAGCACCAAGCTTACTTGCTGGTGTTTGTAACTCATCAAATCCTGAATGCTCTCCCTTTTCGCAAACAGTCGTCTCAGGAAAAACATACAGAATTAGAGTTGCTAGCTTGACTGCTTATCAGCACTTAGTTTCCAAATAGAGGTAATCATTCATTCACTCAATTATTCTAAGTATCATTCAAGTTTTTAAACAAGGTCTGCGACAATAATCTCAGTTGAGACACCATGGTTTTTGATGTATGCACAACAATGTTGTAAAAATCGGACCGACTGGTTTCACTGGAAACCAGCTGGTGCAACACATGGTTCAGCCGCAGACAATTCACACTTGCAGCCCTATAGAACCGATAGAACCAGGTTGAACTGCGTTTCAACCACAATTGGTTCAACCAGTCTGGCTTCTTTATAAAAAATATACATTTTTAATGTCTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTATTTCTTAGTCATATTATTGAACCACAATTTAGGGTTAAGGGTCAAGGCTAAACCGATTAAACCAATTGAACCATGATCCAAAAGTCTCACTCGTTTGATCACCGGTCTAGTTTTGATCACATTGATCTACTATCACAGAATGACTACGACTACCATTAAGGCCACATCAGTCACATACGATTCTTTGCAATATCAAAAGATTGTGACCCGACTATTACCAAAATTTAACCTCGTTTAATTTTTCTCACTCTTTACATCCAGAACTAGTTTTGACATGTTTGTAAATTGTAATAATGCAGGGCCATAACATGACTGTTGTTGAAGCAGATGGACACTATGTTGATCCTTTTGTGGTTAAGAATCTCTACATATACTCAGGTGAAACATACTCAGTTCTAGTCAAAACTGATCAAGACCCATCAAGAAACTACTGGATCACCTCAAATGTTGTCAGCAGAAACAGGACAACCCCGCCTGGTTTAGGCATTTTTAACTACTACCCAAACCATCCAATGAGGTCGCCACCAACATCTCCACCATCTCCACCAGCTTGGGACAATGTTGAGTCAAGACATACTCAAAGCCTTGCAATCAAAGCTCACCAAAATTACACAATCAAACCTCCAACAACCTCAGATAGAGTCATAGTTTTGCTCAACACACAAAACACTATAGACGGTGTTCGTCATTGGTCTGTTAACAACGTATCATTTTTCCTACCTCACACCCCTTATCTTGTTGCACTTAAAGAGAATATAACTGGTGAATTCAACCAAACACCTCCACCTGATGGCTATGATTTTAATAATTATGATATTTTCAGCGTGGCTAACAACACAAATGCTACTTCTAGCAATGGAATTTATAGGCTGAAGTTCAATACAACTGTGGATATTATACTACAAAATGCAAACACTATGAATAAAAATAATAGTGAGACACATCCATGGCATCTTCATGGACATGATTTTTGGGTACTTGGATATGGAAAGGGTAAGTTTGATGTGAACAAAGACCCAAAAAATTATAATTTGGTGAACCCCATTATGAAGAATACTGTGCCAGTGCACTCATTTGGTTGGACTGCTTTGAGGTTTCGATCGGATAATCCTGGTGTTTGGGCTTTTCATTGTCATATAGAGTCTCATTTCTATATGGGAATGGGAGTGGTTTTTGAAGAAGGAATTGAAAGGGTGGGAAGCTACCTTCATCCATCATGGGTTGTGGCAAAAGCAAAGGCTTCTTAG

Protein sequence

>MS.gene059694.t1

IGTPWFDGTEGVSQCPILPGDTFVYRFVVDRPGTYLYHAHYGMQREAGVYGMIRVAPNDPEPFSYDFDRSIILNDWYHKSTYEQSAGLSAIPFQWVGEPDSLLIHGKGRYNCSLAPSLLAGVCNSSNPECSPFSQTVVSGKTYRIRVASLTAYQHLGHNMTVVEADGHYVDPFVVKNLYIYSGETYSVLVKTDQDPSRNYWITSNVVSRNRTTPPGLGIFNYYPNHPMRSPPTSPPSPPAWDNVESRHTQSLAIKAHQNYTIKPPTTSDRVIVLLNTQNTIDGVRHWSVNNVSFFLPHTPYLVALKENITGEFNQTPPPDGYDFNNYDIFSVANNTNATSSNGIYRLKFNTTVDIILQNANTMNKNNSETHPWHLHGHDFWVLGYGKGKFDVNKDPKNYNLVNPIMKNTVPVHSFGWTALRFRSDNPGVWAFHCHIESHFYMGMGVVFEEGIERVGSYLHPSWVVAKAKAS