AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene66306

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66306.t1 MTR_6g092620 97.030 303 9 0 1 303 1 303 0.0 614
MS.gene66306.t1 MTR_2g025120 48.845 303 142 5 3 296 4 302 2.66e-99 295
MS.gene66306.t1 MTR_3g083370 48.505 301 146 4 3 297 4 301 5.06e-99 293
MS.gene66306.t1 MTR_5g085330 47.727 308 146 5 1 297 3 306 1.85e-98 292
MS.gene66306.t1 MTR_3g088565 46.688 317 138 6 1 297 1 306 3.09e-90 271
MS.gene66306.t1 MTR_2g025120 48.879 223 110 3 3 224 4 223 9.55e-72 221
MS.gene66306.t1 MTR_3g083370 48.430 223 111 3 3 224 4 223 2.65e-70 218
MS.gene66306.t1 MTR_4g015790 37.624 303 162 9 3 285 62 357 2.13e-56 186
MS.gene66306.t1 MTR_7g068650 39.855 276 150 7 3 266 54 325 7.04e-55 182
MS.gene66306.t1 MTR_5g082750 36.918 279 159 7 3 269 49 322 4.02e-52 175
MS.gene66306.t1 MTR_3g070860 37.276 279 158 8 3 269 50 323 1.34e-50 171
MS.gene66306.t1 MTR_4g132770 54.861 144 54 3 148 282 18 159 2.62e-50 164
MS.gene66306.t1 MTR_3g063180 33.555 301 170 10 2 279 41 334 6.84e-44 153
MS.gene66306.t1 MTR_3g092890 35.165 273 160 8 3 267 38 301 2.38e-42 149
MS.gene66306.t1 MTR_8g024120 34.098 305 171 9 2 290 41 331 3.52e-41 146
MS.gene66306.t1 MTR_5g048550 30.795 302 188 7 3 290 47 341 4.67e-41 146
MS.gene66306.t1 MTR_5g055900 31.159 276 173 7 3 269 47 314 7.66e-41 145
MS.gene66306.t1 MTR_7g062600 32.653 294 178 6 3 288 51 332 2.06e-40 144
MS.gene66306.t1 MTR_8g064200 30.182 275 178 5 3 269 52 320 6.67e-40 143
MS.gene66306.t1 MTR_8g064200 30.182 275 178 5 3 269 57 325 7.56e-40 143
MS.gene66306.t1 MTR_7g062550 33.654 312 176 11 3 302 60 352 1.28e-39 142
MS.gene66306.t1 MTR_7g062570 33.007 306 174 10 3 289 55 348 1.56e-39 142
MS.gene66306.t1 MTR_2g072890 32.374 278 167 8 1 266 50 318 1.75e-39 142
MS.gene66306.t1 MTR_5g048570 31.752 274 172 6 1 266 43 309 1.89e-39 142
MS.gene66306.t1 MTR_5g032870 32.903 310 179 11 2 292 37 336 3.36e-39 141
MS.gene66306.t1 MTR_7g063730 34.211 304 171 9 3 285 64 359 5.00e-39 141
MS.gene66306.t1 MTR_5g055680 30.182 275 177 6 3 269 47 314 8.28e-39 140
MS.gene66306.t1 MTR_2g069300 32.061 262 157 7 3 253 54 305 9.27e-39 140
MS.gene66306.t1 MTR_5g032880 33.898 295 166 10 2 279 37 319 9.77e-39 144
MS.gene66306.t1 MTR_5g032880 33.119 311 177 11 2 292 375 674 3.46e-37 140
MS.gene66306.t1 MTR_1g033810 32.852 277 169 6 3 269 47 316 1.52e-38 139
MS.gene66306.t1 MTR_0009s0050 31.273 275 174 6 3 269 47 314 2.24e-38 139
MS.gene66306.t1 MTR_0009s0050 31.273 275 174 6 3 269 47 314 2.33e-38 139
MS.gene66306.t1 MTR_7g062580 32.542 295 176 8 3 288 55 335 2.60e-38 139
MS.gene66306.t1 MTR_4g093840 31.908 304 179 10 3 284 62 359 2.70e-38 139
MS.gene66306.t1 MTR_5g065010 32.881 295 173 10 3 280 39 325 2.95e-38 138
MS.gene66306.t1 MTR_2g072910 32.975 279 164 9 1 266 49 317 6.99e-38 137
MS.gene66306.t1 MTR_5g048470 30.182 275 178 5 3 269 53 321 7.84e-38 137
MS.gene66306.t1 MTR_3g117420 29.455 275 180 5 1 266 50 319 1.83e-37 136
MS.gene66306.t1 MTR_8g075890 33.091 275 159 10 3 262 39 303 1.95e-36 134
MS.gene66306.t1 MTR_3g072810 33.333 282 159 9 23 286 56 326 2.19e-36 133
MS.gene66306.t1 MTR_3g026150 32.500 280 162 8 1 266 58 324 3.35e-36 133
MS.gene66306.t1 MTR_5g055820 29.412 272 178 6 3 266 47 312 6.92e-36 132
MS.gene66306.t1 MTR_5g048850 30.515 272 174 6 3 266 47 311 7.08e-36 132
MS.gene66306.t1 MTR_5g059130 33.929 280 159 8 1 266 42 309 1.13e-35 131
MS.gene66306.t1 MTR_0328s0030 29.276 304 190 8 3 290 45 339 1.19e-35 131
MS.gene66306.t1 MTR_8g074050 28.929 280 171 6 3 266 52 319 1.27e-35 131
MS.gene66306.t1 MTR_8g009080 30.418 263 163 9 1 253 92 344 1.53e-35 132
MS.gene66306.t1 MTR_5g055690 29.670 273 176 6 3 266 47 312 3.30e-35 130
MS.gene66306.t1 MTR_0009s0480 30.605 281 172 7 3 271 46 315 4.25e-35 130
MS.gene66306.t1 MTR_1g093110 30.268 261 160 10 3 252 70 319 4.50e-35 130
MS.gene66306.t1 MTR_2g068950 27.957 279 181 8 1 269 61 329 5.44e-35 130
MS.gene66306.t1 MTR_2g069060 31.655 278 154 9 1 260 47 306 6.62e-35 129
MS.gene66306.t1 MTR_2g069090 29.924 264 158 6 3 252 68 318 8.00e-35 130
MS.gene66306.t1 MTR_2g437380 29.582 311 183 9 3 289 50 348 1.02e-34 129
MS.gene66306.t1 MTR_2g083000 29.167 288 180 9 3 279 33 307 2.16e-34 127
MS.gene66306.t1 MTR_2g069010 27.099 262 171 8 1 252 67 318 3.41e-34 128
MS.gene66306.t1 MTR_3g072820 33.094 278 164 10 1 266 40 307 3.50e-34 127
MS.gene66306.t1 MTR_4g116010 29.771 262 168 5 1 254 48 301 3.55e-34 127
MS.gene66306.t1 MTR_2g068960 28.137 263 167 9 1 252 61 312 4.97e-34 127
MS.gene66306.t1 MTR_8g075830 32.727 275 160 10 3 262 39 303 5.00e-34 127
MS.gene66306.t1 MTR_7g062560 32.653 294 181 8 3 289 62 345 5.34e-34 127
MS.gene66306.t1 MTR_8g062600 28.736 261 168 7 1 252 65 316 6.00e-34 127
MS.gene66306.t1 MTR_3g091350 32.131 305 181 10 2 289 58 353 6.14e-34 127
MS.gene66306.t1 MTR_8g041620 29.316 307 182 10 1 283 66 361 6.27e-34 127
MS.gene66306.t1 MTR_5g055800 30.744 309 178 10 3 290 47 340 7.29e-34 127
MS.gene66306.t1 MTR_8g074070 29.236 301 189 8 3 285 52 346 8.45e-34 127
MS.gene66306.t1 MTR_7g102820 29.874 318 199 8 1 297 65 379 8.48e-34 127
MS.gene66306.t1 MTR_5g059140 31.295 278 171 8 1 266 40 309 2.29e-33 125
MS.gene66306.t1 MTR_2g069210 30.303 264 156 8 3 252 64 313 2.42e-33 125
MS.gene66306.t1 MTR_1g093140 27.574 272 176 9 1 261 71 332 3.24e-33 125
MS.gene66306.t1 MTR_5g011250 29.893 281 173 9 3 266 47 320 4.89e-33 125
MS.gene66306.t1 MTR_2g069020 28.626 262 167 8 1 252 65 316 5.58e-33 125
MS.gene66306.t1 MTR_5g022020 32.155 283 151 10 3 262 39 303 6.00e-33 124
MS.gene66306.t1 MTR_2g069020 28.626 262 167 8 1 252 65 316 7.09e-33 125
MS.gene66306.t1 MTR_8g063070 29.057 265 162 8 1 252 65 316 8.42e-33 124
MS.gene66306.t1 MTR_7g045650 33.333 243 145 6 3 236 60 294 1.00e-32 123
MS.gene66306.t1 MTR_7g451860 31.119 286 176 9 3 277 41 316 1.02e-32 123
MS.gene66306.t1 MTR_7g047670 31.119 286 176 9 3 277 41 316 1.02e-32 123
MS.gene66306.t1 MTR_5g005570 28.671 286 180 9 3 277 37 309 1.22e-32 123
MS.gene66306.t1 MTR_8g009160 30.189 265 160 9 2 253 59 311 1.30e-32 124
MS.gene66306.t1 MTR_2g069190 29.167 264 159 7 3 252 68 317 2.48e-32 123
MS.gene66306.t1 MTR_1g011580 30.435 276 160 10 2 263 62 319 2.61e-32 123
MS.gene66306.t1 MTR_4g024660 27.586 261 171 7 1 252 65 316 3.87e-32 122
MS.gene66306.t1 MTR_7g056347 28.626 262 167 9 1 252 65 316 7.31e-32 122
MS.gene66306.t1 MTR_8g041600 28.223 287 180 9 1 271 66 342 7.99e-32 122
MS.gene66306.t1 MTR_1g093120 28.897 263 165 10 1 252 65 316 1.02e-31 121
MS.gene66306.t1 MTR_4g087090 28.912 294 176 9 2 271 29 313 1.08e-31 121
MS.gene66306.t1 MTR_3g117485 28.477 302 189 9 1 283 47 340 1.34e-31 120
MS.gene66306.t1 MTR_1g043760 30.690 290 165 11 3 280 54 319 1.35e-31 120
MS.gene66306.t1 MTR_7g105070 32.042 284 164 11 2 269 58 328 1.48e-31 121
MS.gene66306.t1 MTR_5g048740 28.929 280 175 8 3 269 45 313 1.54e-31 120
MS.gene66306.t1 MTR_2g102570 28.975 283 172 9 3 270 52 320 1.78e-31 120
MS.gene66306.t1 MTR_3g091360 32.781 302 181 9 2 288 51 345 1.94e-31 120
MS.gene66306.t1 MTR_8g009110 28.626 262 167 8 2 252 59 311 4.66e-31 119
MS.gene66306.t1 MTR_2g083030 29.617 287 177 10 3 277 37 310 7.36e-31 118
MS.gene66306.t1 MTR_0009s0050 33.684 190 118 3 82 269 33 216 7.47e-31 116
MS.gene66306.t1 MTR_0009s0050 33.684 190 118 3 82 269 33 216 8.91e-31 116
MS.gene66306.t1 MTR_3g058610 30.576 278 162 9 3 262 39 303 9.58e-31 118
MS.gene66306.t1 MTR_1g062110 29.492 295 182 8 1 277 64 350 1.97e-30 118
MS.gene66306.t1 MTR_7g029655 30.104 289 169 13 3 280 67 333 3.58e-30 117
MS.gene66306.t1 MTR_8g009170 28.517 263 168 8 2 253 59 312 3.91e-30 117
MS.gene66306.t1 MTR_7g016090 29.355 310 187 11 2 295 40 333 5.37e-30 116
MS.gene66306.t1 MTR_7g016090 29.355 310 187 11 2 295 38 331 6.18e-30 116
MS.gene66306.t1 MTR_4g117880 27.170 265 167 9 2 252 59 311 9.06e-30 116
MS.gene66306.t1 MTR_0056s0160 29.954 217 138 4 82 290 16 226 1.22e-29 113
MS.gene66306.t1 MTR_8g008930 28.929 280 173 10 2 269 59 324 1.47e-29 115
MS.gene66306.t1 MTR_1g070185 29.502 261 164 8 3 254 69 318 3.37e-29 114
MS.gene66306.t1 MTR_6g464620 29.795 292 164 11 1 266 62 338 9.29e-29 114
MS.gene66306.t1 MTR_3g117485 29.658 263 161 8 37 283 14 268 9.42e-29 111
MS.gene66306.t1 MTR_8g028435 28.244 262 167 8 2 252 59 310 1.34e-28 113
MS.gene66306.t1 MTR_8g009090 29.181 281 170 10 2 269 59 323 1.60e-28 112
MS.gene66306.t1 MTR_4g087120 26.733 303 176 8 2 271 25 314 1.81e-28 112
MS.gene66306.t1 MTR_3g026150 35.751 193 114 4 82 271 41 226 1.86e-28 110
MS.gene66306.t1 MTR_6g015950 27.273 308 199 9 2 296 38 333 2.78e-28 111
MS.gene66306.t1 MTR_7g081710 29.530 298 180 11 2 280 48 334 2.86e-28 112
MS.gene66306.t1 MTR_1g070080 28.428 299 187 9 3 284 38 326 3.85e-28 111
MS.gene66306.t1 MTR_8g074070 27.759 299 177 8 3 285 52 327 5.55e-28 110
MS.gene66306.t1 MTR_4g119410 28.244 262 168 8 1 252 65 316 1.37e-27 110
MS.gene66306.t1 MTR_7g056393 29.167 264 163 9 1 252 65 316 2.08e-27 110
MS.gene66306.t1 MTR_1g034060 25.705 319 195 8 3 286 26 337 3.06e-27 109
MS.gene66306.t1 MTR_7g078010 29.924 264 161 9 1 252 65 316 3.09e-27 109
MS.gene66306.t1 MTR_8g006930 30.682 264 159 9 1 252 65 316 3.18e-27 109
MS.gene66306.t1 MTR_1g102070 29.795 292 164 11 1 266 57 333 3.39e-27 109
MS.gene66306.t1 MTR_4g074130 28.070 285 185 8 3 277 40 314 4.44e-27 108
MS.gene66306.t1 MTR_1g043770 28.846 260 168 8 2 253 52 302 5.37e-27 108
MS.gene66306.t1 MTR_4g087110 25.484 310 181 9 4 278 33 327 5.66e-27 108
MS.gene66306.t1 MTR_1g034120 26.606 327 182 10 3 286 26 337 7.11e-27 108
MS.gene66306.t1 MTR_7g102720 27.673 318 189 13 2 296 36 335 1.03e-26 107
MS.gene66306.t1 MTR_2g069060 31.405 242 130 9 1 224 25 248 1.03e-26 105
MS.gene66306.t1 MTR_2g068840 28.882 322 186 13 3 296 55 361 1.06e-26 107
MS.gene66306.t1 MTR_4g132765 38.889 162 95 3 3 163 4 162 1.23e-26 110
MS.gene66306.t1 MTR_0009s0050 42.105 114 65 1 156 269 22 134 1.60e-26 103
MS.gene66306.t1 MTR_2g437380 31.797 217 133 6 82 289 44 254 1.88e-26 105
MS.gene66306.t1 MTR_1g070135 26.909 275 184 6 2 267 37 303 1.95e-26 107
MS.gene66306.t1 MTR_1g070120 28.391 317 173 13 2 288 37 329 2.11e-26 106
MS.gene66306.t1 MTR_8g033380 25.472 318 195 10 1 289 52 356 2.39e-26 107
MS.gene66306.t1 MTR_1g070085 27.000 300 197 8 2 286 36 328 2.98e-26 106
MS.gene66306.t1 MTR_1g070085 27.000 300 197 8 2 286 36 328 2.98e-26 106
MS.gene66306.t1 MTR_8g469400 27.652 264 154 9 1 252 65 303 4.29e-26 106
MS.gene66306.t1 MTR_7g016080 28.616 318 169 12 3 295 41 325 7.32e-26 105
MS.gene66306.t1 MTR_2g072910 32.083 240 140 9 1 227 49 278 1.55e-25 103
MS.gene66306.t1 MTR_0032s0040 27.757 263 164 12 3 252 70 319 2.46e-25 104
MS.gene66306.t1 MTR_1g043810 30.153 262 163 10 2 253 53 304 3.22e-25 103
MS.gene66306.t1 MTR_4g115990 26.224 286 185 6 1 277 44 312 6.90e-25 102
MS.gene66306.t1 MTR_7g056353 31.169 231 136 8 38 258 79 296 9.21e-25 103
MS.gene66306.t1 MTR_3g026150 30.769 234 143 7 1 224 58 282 1.13e-24 100
MS.gene66306.t1 MTR_8g009080 28.326 233 147 9 1 223 92 314 1.16e-24 101
MS.gene66306.t1 MTR_3g040410 28.763 299 188 10 3 285 6 295 1.29e-24 101
MS.gene66306.t1 MTR_5g048850 29.310 232 149 6 3 226 47 271 2.16e-24 100
MS.gene66306.t1 MTR_3g043900 27.106 273 180 7 2 266 55 316 2.24e-24 101
MS.gene66306.t1 MTR_3g045230 26.837 313 198 12 2 296 55 354 2.34e-24 101
MS.gene66306.t1 MTR_8g009080 28.696 230 144 9 1 220 92 311 2.62e-24 100
MS.gene66306.t1 MTR_3g464530 28.676 272 162 9 3 260 34 287 3.30e-24 100
MS.gene66306.t1 MTR_8g009120 27.099 262 161 8 2 253 59 300 3.74e-24 100
MS.gene66306.t1 MTR_1g043775 29.119 261 167 9 2 253 53 304 4.31e-24 100
MS.gene66306.t1 MTR_5g055690 28.571 231 149 6 3 224 47 270 9.73e-24 98.2
MS.gene66306.t1 MTR_1g032140 26.950 282 171 10 3 267 66 329 1.50e-23 99.4
MS.gene66306.t1 MTR_4g087140 25.000 316 186 9 2 278 25 328 1.64e-23 99.0
MS.gene66306.t1 MTR_0009s0400 37.313 134 77 2 162 289 4 136 1.72e-23 94.4
MS.gene66306.t1 MTR_8g041600 27.542 236 149 8 1 224 66 291 2.90e-23 97.4
MS.gene66306.t1 MTR_0009s0480 29.915 234 141 7 3 224 46 268 3.52e-23 96.7
MS.gene66306.t1 MTR_1g034140 26.667 285 178 9 3 266 27 301 3.80e-23 97.8
MS.gene66306.t1 MTR_1g027290 28.840 319 193 14 3 297 29 337 9.22e-23 96.7
MS.gene66306.t1 MTR_4g087100 27.372 274 165 10 3 249 26 292 2.45e-22 95.9
MS.gene66306.t1 MTR_8g093980 26.198 313 195 13 1 288 57 358 2.48e-22 95.9
MS.gene66306.t1 MTR_8g009150 25.000 264 156 8 2 253 59 292 2.90e-22 95.5
MS.gene66306.t1 MTR_8g093930 24.912 285 173 11 1 260 45 313 2.82e-21 92.8
MS.gene66306.t1 MTR_3g096500 26.573 286 175 12 4 266 67 340 3.01e-21 93.2
MS.gene66306.t1 MTR_1g081840 24.460 278 185 9 4 263 54 324 3.75e-21 92.8
MS.gene66306.t1 MTR_2g019370 25.442 283 180 9 2 266 27 296 3.93e-21 92.0
MS.gene66306.t1 MTR_1g048940 26.820 261 175 8 3 253 45 299 1.52e-20 90.9
MS.gene66306.t1 MTR_3g088745 26.774 310 184 13 1 280 34 330 1.63e-20 90.9
MS.gene66306.t1 MTR_1g032250 27.333 300 192 11 3 289 73 359 2.75e-20 90.1
MS.gene66306.t1 MTR_8g009180 32.447 188 102 6 82 253 63 241 4.35e-20 88.6
MS.gene66306.t1 MTR_1g070085 30.055 183 115 4 110 286 75 250 9.27e-20 87.0
MS.gene66306.t1 MTR_8g009170 26.609 233 151 8 2 223 59 282 1.23e-19 87.4
MS.gene66306.t1 MTR_1g070100 31.847 157 100 3 110 266 71 220 1.46e-19 86.7
MS.gene66306.t1 MTR_4g087130 26.460 291 181 7 2 266 25 308 2.35e-19 87.4
MS.gene66306.t1 MTR_2g068800 27.273 253 149 10 3 244 55 283 2.85e-19 86.3
MS.gene66306.t1 MTR_8g461330 27.758 281 175 11 3 266 27 296 4.82e-19 86.3
MS.gene66306.t1 MTR_1g032220 30.797 276 168 12 3 267 73 336 5.16e-19 86.7
MS.gene66306.t1 MTR_2g070870 23.906 297 207 8 2 289 27 313 8.36e-19 85.5
MS.gene66306.t1 MTR_1g043770 27.391 230 150 8 2 223 52 272 1.61e-18 84.3
MS.gene66306.t1 MTR_5g025090 26.688 311 162 11 2 280 4 280 1.79e-18 84.3
MS.gene66306.t1 MTR_1g062110 27.490 251 159 7 1 236 64 306 2.07e-18 84.3
MS.gene66306.t1 MTR_1g027310 25.676 296 152 10 3 279 49 295 2.50e-18 84.0
MS.gene66306.t1 MTR_1g070135 26.724 232 153 6 2 224 37 260 4.18e-18 82.8
MS.gene66306.t1 MTR_7g078010 28.390 236 145 9 1 224 65 288 4.43e-18 83.2
MS.gene66306.t1 MTR_4g011720 27.740 292 158 10 3 266 9 275 1.09e-17 82.0
MS.gene66306.t1 MTR_4g123020 25.000 308 194 12 3 288 20 312 3.63e-17 80.9
MS.gene66306.t1 MTR_3g464530 27.119 236 141 8 3 224 34 252 1.06e-16 78.6
MS.gene66306.t1 MTR_4g100600 25.448 279 180 9 1 260 7 276 1.35e-16 79.3
MS.gene66306.t1 MTR_4g011690 26.168 321 181 11 3 292 9 304 1.46e-16 79.0
MS.gene66306.t1 MTR_1g043810 28.448 232 146 10 2 223 53 274 1.92e-16 79.0
MS.gene66306.t1 MTR_1g043840 33.803 142 87 4 114 255 54 188 3.62e-16 78.2
MS.gene66306.t1 MTR_6g088665 26.045 311 184 12 5 278 20 321 8.27e-16 77.0
MS.gene66306.t1 MTR_1g043775 27.273 231 150 9 2 223 53 274 1.79e-15 75.9
MS.gene66306.t1 MTR_6g088665 25.962 312 184 12 5 278 20 322 1.92e-15 75.9
MS.gene66306.t1 MTR_4g096840 25.260 289 171 11 2 266 28 295 2.15e-15 75.9
MS.gene66306.t1 MTR_8g102600 27.875 287 168 13 6 264 15 290 3.46e-15 75.1
MS.gene66306.t1 MTR_1g070110 35.484 124 71 4 171 288 104 224 8.49e-15 72.8
MS.gene66306.t1 MTR_2g033270 23.899 318 201 13 3 298 19 317 8.50e-15 73.9
MS.gene66306.t1 MTR_4g100590 24.549 277 176 11 3 260 9 271 3.51e-13 69.3
MS.gene66306.t1 MTR_5g025060 26.367 311 177 14 2 297 5 278 1.37e-12 67.0
MS.gene66306.t1 MTR_4g021380 24.601 313 193 15 3 285 7 306 2.74e-12 66.6
MS.gene66306.t1 MTR_7g090520 26.131 199 135 4 102 294 119 311 2.30e-11 63.9
MS.gene66306.t1 MTR_8g102600 33.537 164 92 9 110 264 85 240 8.98e-11 61.6
MS.gene66306.t1 MTR_4g011720 26.400 250 131 10 3 224 9 233 9.71e-11 61.6
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene66306.t1 AT2G19590 69.307 303 90 2 1 303 9 308 2.27e-155 436
MS.gene66306.t1 AT2G19590 70.111 271 78 2 33 303 26 293 1.41e-137 391
MS.gene66306.t1 AT1G62380 47.712 306 150 5 1 300 5 306 1.46e-100 298
MS.gene66306.t1 AT1G12010 47.039 304 151 5 1 298 5 304 2.19e-99 295
MS.gene66306.t1 AT1G05010 45.307 309 152 6 2 297 3 307 3.04e-92 277
MS.gene66306.t1 AT1G77330 45.541 314 147 8 1 298 1 306 9.73e-83 252
MS.gene66306.t1 AT2G38240 35.036 274 165 5 1 266 46 314 2.99e-49 167
MS.gene66306.t1 AT5G05600 36.594 276 158 7 3 266 62 332 3.48e-49 167
MS.gene66306.t1 AT3G55970 33.574 277 169 6 2 266 51 324 2.62e-47 162
MS.gene66306.t1 AT3G11180 34.182 275 162 6 3 266 95 361 4.19e-44 155
MS.gene66306.t1 AT3G11180 33.333 309 178 9 3 295 95 391 4.57e-44 155
MS.gene66306.t1 AT4G10490 33.555 301 177 9 2 286 41 334 9.05e-44 153
MS.gene66306.t1 AT4G16330 31.475 305 177 9 2 291 66 353 5.96e-43 151
MS.gene66306.t1 AT5G08640 33.898 295 165 10 2 277 42 325 1.65e-40 144
MS.gene66306.t1 AT5G08640 33.898 295 165 10 2 277 42 325 1.65e-40 144
MS.gene66306.t1 AT5G24530 32.353 272 167 8 3 266 38 300 6.20e-40 142
MS.gene66306.t1 AT4G10500 34.066 273 165 7 2 266 43 308 1.80e-39 142
MS.gene66306.t1 AT1G78550 30.070 286 173 6 3 273 53 326 3.56e-38 138
MS.gene66306.t1 AT5G20550 31.884 276 168 5 1 263 43 311 6.42e-38 137
MS.gene66306.t1 AT5G20400 30.897 301 181 9 1 283 43 334 1.47e-37 136
MS.gene66306.t1 AT1G49390 31.159 276 175 5 1 266 43 313 9.86e-37 134
MS.gene66306.t1 AT5G05600 34.615 234 136 7 3 224 62 290 8.14e-36 130
MS.gene66306.t1 AT1G17010 31.786 280 163 8 3 266 54 321 9.22e-36 132
MS.gene66306.t1 AT3G51240 32.727 275 160 10 3 262 38 302 9.86e-36 132
MS.gene66306.t1 AT4G16330 34.956 226 131 6 70 291 34 247 2.57e-35 128
MS.gene66306.t1 AT1G15550 30.605 281 167 9 3 269 57 323 6.48e-35 130
MS.gene66306.t1 AT1G17020 31.227 269 158 8 1 253 51 308 1.72e-34 129
MS.gene66306.t1 AT5G43450 27.586 261 171 7 1 253 59 309 1.79e-33 126
MS.gene66306.t1 AT4G25300 29.963 267 159 8 3 253 52 306 2.00e-33 125
MS.gene66306.t1 AT2G30840 29.682 283 161 11 1 266 55 316 4.73e-33 125
MS.gene66306.t1 AT3G55970 30.213 235 149 6 2 224 51 282 7.58e-33 123
MS.gene66306.t1 AT5G54000 29.964 277 169 7 1 262 44 310 8.14e-33 124
MS.gene66306.t1 AT5G63590 32.313 294 174 10 1 277 12 297 2.34e-32 122
MS.gene66306.t1 AT1G78550 29.070 258 156 6 31 273 3 248 4.06e-32 120
MS.gene66306.t1 AT5G59540 28.358 268 164 8 1 253 59 313 4.91e-32 122
MS.gene66306.t1 AT4G22880 29.181 281 175 9 3 266 47 320 9.43e-32 121
MS.gene66306.t1 AT4G22880 29.181 281 175 9 3 266 47 320 9.43e-32 121
MS.gene66306.t1 AT4G22880 29.181 281 175 9 3 266 47 320 9.43e-32 121
MS.gene66306.t1 AT4G25310 31.667 240 140 7 26 253 76 303 1.00e-31 121
MS.gene66306.t1 AT2G30830 31.835 267 154 11 1 252 52 305 1.09e-31 121
MS.gene66306.t1 AT5G59530 29.278 263 169 7 1 253 56 311 1.55e-31 121
MS.gene66306.t1 AT1G06620 29.740 269 157 10 1 253 60 312 4.83e-31 119
MS.gene66306.t1 AT1G80340 29.433 282 171 7 2 269 49 316 1.41e-30 118
MS.gene66306.t1 AT2G36690 26.962 293 187 9 1 277 59 340 1.47e-30 118
MS.gene66306.t1 AT2G36690 26.962 293 187 9 1 277 59 340 1.47e-30 118
MS.gene66306.t1 AT1G49390 30.252 238 153 4 37 266 2 234 2.86e-30 115
MS.gene66306.t1 AT3G21420 30.341 323 185 11 3 298 55 364 6.04e-30 116
MS.gene66306.t1 AT4G21200 29.043 303 192 10 3 293 42 333 7.72e-30 115
MS.gene66306.t1 AT2G30840 29.329 283 156 12 1 266 55 310 8.78e-30 116
MS.gene66306.t1 AT1G03410 28.723 282 173 12 1 269 55 321 1.19e-29 115
MS.gene66306.t1 AT3G13610 29.514 288 156 12 2 266 61 324 1.79e-29 115
MS.gene66306.t1 AT1G03410 28.723 282 173 12 1 269 92 358 1.99e-29 115
MS.gene66306.t1 AT5G07480 32.090 268 157 10 3 253 44 303 2.97e-29 114
MS.gene66306.t1 AT5G07200 28.276 290 172 8 1 266 56 333 4.15e-29 114
MS.gene66306.t1 AT1G04350 28.090 267 163 11 1 253 56 307 6.27e-29 114
MS.gene66306.t1 AT1G06650 26.882 279 180 10 2 269 63 328 7.50e-29 114
MS.gene66306.t1 AT3G12900 28.013 307 190 11 6 293 59 353 1.44e-28 112
MS.gene66306.t1 AT3G51240 38.043 184 103 6 83 262 42 218 1.88e-28 110
MS.gene66306.t1 AT5G63600 27.875 287 189 7 3 279 33 311 5.66e-28 110
MS.gene66306.t1 AT5G43440 25.670 261 174 8 1 251 60 310 5.75e-28 111
MS.gene66306.t1 AT2G44800 28.904 301 190 9 2 286 51 343 6.86e-28 111
MS.gene66306.t1 AT1G60980 26.462 325 182 13 1 288 55 359 7.30e-28 111
MS.gene66306.t1 AT1G04380 26.996 263 169 9 1 253 43 292 9.10e-28 110
MS.gene66306.t1 AT3G60290 29.874 318 191 13 3 301 52 356 1.49e-27 110
MS.gene66306.t1 AT5G63600 28.125 288 188 8 3 279 33 312 3.87e-27 108
MS.gene66306.t1 AT1G55290 30.496 282 153 12 2 262 61 320 6.87e-27 108
MS.gene66306.t1 AT3G61400 28.058 278 160 10 2 255 59 320 1.66e-26 107
MS.gene66306.t1 AT5G54000 29.707 239 145 6 37 262 2 230 1.79e-26 105
MS.gene66306.t1 AT1G50960 29.078 282 177 9 1 272 38 306 1.96e-26 106
MS.gene66306.t1 AT1G06645 25.641 273 164 10 23 283 100 345 2.13e-26 107
MS.gene66306.t1 AT3G19010 28.197 305 162 10 3 271 28 311 4.90e-26 105
MS.gene66306.t1 AT3G19010 28.197 305 162 10 3 271 28 311 4.90e-26 105
MS.gene66306.t1 AT5G51810 25.397 315 193 11 1 288 61 360 7.40e-26 105
MS.gene66306.t1 AT1G03400 27.985 268 166 10 1 258 54 304 1.00e-25 105
MS.gene66306.t1 AT2G25450 28.082 292 177 11 1 280 53 323 1.30e-25 105
MS.gene66306.t1 AT1G80330 28.852 305 175 13 2 280 48 336 1.72e-25 104
MS.gene66306.t1 AT5G63595 27.925 265 163 7 4 264 26 266 2.06e-25 102
MS.gene66306.t1 AT1G06640 24.643 280 185 10 2 269 63 328 3.10e-25 103
MS.gene66306.t1 AT2G30840 28.870 239 140 9 1 223 55 279 8.43e-25 101
MS.gene66306.t1 AT1G44090 26.855 283 183 10 1 266 61 336 1.88e-24 102
MS.gene66306.t1 AT4G25420 25.392 319 192 11 1 288 59 362 2.03e-24 102
MS.gene66306.t1 AT5G43450 25.974 231 153 7 1 223 59 279 2.59e-24 100
MS.gene66306.t1 AT3G19000 28.763 299 182 9 3 277 32 323 3.01e-24 101
MS.gene66306.t1 AT1G06620 28.870 239 138 10 2 224 61 283 1.19e-22 95.5
MS.gene66306.t1 AT4G21690 26.882 279 173 10 3 262 47 313 1.34e-22 96.7
MS.gene66306.t1 AT5G59540 27.197 239 146 8 1 224 59 284 1.41e-22 95.5
MS.gene66306.t1 AT1G30040 25.974 308 193 13 2 288 30 323 2.83e-22 95.5
MS.gene66306.t1 AT1G06650 27.155 232 150 8 2 223 63 285 4.95e-22 94.4
MS.gene66306.t1 AT4G25300 32.639 144 92 2 110 253 74 212 5.76e-22 93.2
MS.gene66306.t1 AT5G07480 36.667 150 82 5 110 253 52 194 1.99e-21 91.3
MS.gene66306.t1 AT3G19010 27.333 300 177 10 3 286 28 302 3.97e-21 92.0
MS.gene66306.t1 AT1G03400 26.840 231 147 7 1 224 54 269 6.73e-21 92.0
MS.gene66306.t1 AT4G25310 27.984 243 117 8 26 253 76 275 1.05e-20 90.9
MS.gene66306.t1 AT5G43440 24.576 236 158 8 1 226 60 285 2.18e-20 89.4
MS.gene66306.t1 AT5G12270 28.750 320 186 15 3 297 56 358 3.70e-20 89.7
MS.gene66306.t1 AT1G04380 25.641 234 155 8 1 226 43 265 1.72e-19 86.7
MS.gene66306.t1 AT3G61400 28.112 249 134 10 2 224 59 288 2.33e-19 86.7
MS.gene66306.t1 AT5G43935 27.338 278 159 11 3 267 19 266 4.87e-19 85.9
MS.gene66306.t1 AT3G19000 27.016 248 145 9 3 224 32 269 7.16e-19 85.1
MS.gene66306.t1 AT3G19010 27.799 259 130 10 3 225 28 265 9.90e-19 84.7
MS.gene66306.t1 AT3G47190 28.276 290 137 12 3 254 32 288 1.81e-18 84.7
MS.gene66306.t1 AT1G06640 24.359 234 156 8 2 224 63 286 1.82e-18 84.7
MS.gene66306.t1 AT2G34555 25.890 309 193 15 1 288 25 318 2.11e-18 84.3
MS.gene66306.t1 AT1G06640 24.783 230 152 8 2 220 63 282 2.49e-18 83.6
MS.gene66306.t1 AT1G78440 25.182 274 181 9 3 262 18 281 8.19e-17 80.1
MS.gene66306.t1 AT5G51810 25.498 251 153 9 1 231 61 297 9.47e-17 79.3
MS.gene66306.t1 AT5G63580 28.326 233 147 8 2 224 18 240 1.81e-16 77.8
MS.gene66306.t1 AT3G50210 26.316 304 184 10 2 270 7 305 4.88e-16 77.8
MS.gene66306.t1 AT3G50210 26.316 304 184 10 2 270 7 305 4.88e-16 77.8
MS.gene66306.t1 AT3G50210 26.316 304 184 10 2 270 7 305 4.88e-16 77.8
MS.gene66306.t1 AT5G63580 28.139 231 146 8 2 222 18 238 6.11e-16 76.3
MS.gene66306.t1 AT3G46490 29.066 289 170 12 11 271 22 303 8.31e-16 77.0
MS.gene66306.t1 AT3G46500 28.179 291 178 11 2 271 16 296 9.56e-16 76.6
MS.gene66306.t1 AT3G49620 28.070 285 178 9 3 262 34 316 1.22e-15 76.6
MS.gene66306.t1 AT1G02400 27.036 307 171 13 3 277 24 309 1.74e-15 76.3
MS.gene66306.t1 AT4G25420 24.597 248 149 9 1 224 59 292 5.42e-15 74.3
MS.gene66306.t1 AT4G03070 26.433 314 173 13 3 281 14 304 2.55e-14 72.8
MS.gene66306.t1 AT5G51310 25.000 332 206 16 1 299 3 324 3.21e-14 72.4
MS.gene66306.t1 AT3G49630 27.055 292 172 11 3 262 9 291 3.28e-14 72.4
MS.gene66306.t1 AT3G49630 27.239 268 164 10 17 262 29 287 7.09e-14 71.2
MS.gene66306.t1 AT3G46490 28.627 255 150 10 11 238 22 271 1.11e-13 70.9
MS.gene66306.t1 AT1G14120 23.549 293 186 8 2 281 7 274 3.83e-13 69.3
MS.gene66306.t1 AT1G14120 23.549 293 186 8 2 281 7 274 3.83e-13 69.3
MS.gene66306.t1 AT1G14120 23.549 293 186 8 2 281 7 274 3.83e-13 69.3
MS.gene66306.t1 AT1G47990 23.154 298 193 10 3 277 15 299 4.58e-13 68.9
MS.gene66306.t1 AT3G50210 30.120 166 106 4 102 262 53 213 5.57e-13 67.8
MS.gene66306.t1 AT4G16765 31.579 152 91 7 110 254 61 206 6.85e-13 67.4
MS.gene66306.t1 AT4G16765 31.579 152 91 7 110 254 61 206 8.46e-13 67.4
MS.gene66306.t1 AT4G16765 31.579 152 91 7 110 254 61 206 8.46e-13 67.4
MS.gene66306.t1 AT4G16765 31.579 152 91 7 110 254 61 206 8.46e-13 67.4
MS.gene66306.t1 AT1G35190 26.871 294 176 13 1 264 7 291 2.74e-12 66.6
MS.gene66306.t1 AT3G49630 30.675 163 104 5 102 262 63 218 2.80e-12 65.9
MS.gene66306.t1 AT1G28030 27.835 291 164 13 1 265 11 281 7.60e-12 65.5
MS.gene66306.t1 AT3G46500 31.138 167 101 7 112 271 1 160 2.48e-11 62.0
MS.gene66306.t1 AT4G22870 35.577 104 51 6 192 283 2 101 2.82e-11 60.1
MS.gene66306.t1 AT1G30040 23.950 238 152 12 2 224 30 253 3.42e-11 63.2
MS.gene66306.t1 AT3G46500 28.796 191 117 7 78 255 22 206 9.82e-11 61.2

Find 64 sgRNAs with CRISPR-Local

Find 87 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GGTGACTATTTGGAGCTTTA+TGG 0.097365 6.4:+63590213 MS.gene66306:CDS
CCCATTGGCCTTATTCTTAA+TGG 0.120984 6.4:-63590274 None:intergenic
AATTCTTCAAAGATGGAAAA+TGG 0.189069 6.4:+63589811 MS.gene66306:CDS
CTTAGTCCTCTAACCAATTC+TGG 0.204359 6.4:-63589726 None:intergenic
TTATTGCTATGGTGACTATT+TGG 0.248128 6.4:+63590203 MS.gene66306:CDS
ATTTGAATCCATTAAGAATA+AGG 0.271542 6.4:+63590266 MS.gene66306:CDS
TTCTTAATGGATTCAAATCT+AGG 0.286214 6.4:-63590261 None:intergenic
AGTCTACTTCCATTCTTATC+AGG 0.301445 6.4:-63590105 None:intergenic
CATTGCTCAACACTTCAATT+TGG 0.304728 6.4:-63590050 None:intergenic
CCTCTAACCAATTCTGGATA+TGG 0.311179 6.4:-63589720 None:intergenic
GGGAAAGTTCATTCTTCATT+TGG 0.325106 6.4:+63589372 MS.gene66306:CDS
GAAATAATAGCTTCACCAAT+TGG 0.345738 6.4:-63590150 None:intergenic
AATTCTGGATATGGACATTC+AGG 0.350390 6.4:-63589711 None:intergenic
TTACTTGGATACGAGAGTTT+AGG 0.355612 6.4:-63590180 None:intergenic
GGTCTTGAATTCTTCAAAGA+TGG 0.377617 6.4:+63589804 MS.gene66306:CDS
CTTTGTCATCTTGAAGCAAT+AGG 0.381986 6.4:-63589776 None:intergenic
CAAACCTCTCTGAGGAGCTT+TGG 0.383939 6.4:+63589426 MS.gene66306:CDS
GCAAGTTTCTATAATCCAAT+TGG 0.413990 6.4:+63590135 MS.gene66306:CDS
CCATATCCAGAATTGGTTAG+AGG 0.423481 6.4:+63589720 MS.gene66306:CDS
AAAACTAAGTTTGGTGATAA+GGG 0.425129 6.4:+63590237 MS.gene66306:CDS
TAATAATAATGGACCAGCTA+TGG 0.433603 6.4:+63589668 MS.gene66306:CDS
TGAATGTCCATATCCAGAAT+TGG 0.449791 6.4:+63589713 MS.gene66306:CDS
CAAAGCTCCTCAGAGAGGTT+TGG 0.450378 6.4:-63589425 None:intergenic
GATGAGTGAAAATCTTGGTT+TGG 0.451151 6.4:+63589611 MS.gene66306:CDS
ATCGTCCGACGTCTAACATT+AGG 0.472104 6.4:+63589396 MS.gene66306:CDS
ATACAAAAGTGTTGTGCATA+GGG 0.481503 6.4:+63590077 MS.gene66306:CDS
TGACAAAAGAGGTGAAACTA+TGG 0.492889 6.4:+63589040 MS.gene66306:CDS
GCTGATGGAGAAGGTGAAGA+AGG 0.495499 6.4:+63589250 MS.gene66306:CDS
ATTGAGAACCATGACATTGA+GGG 0.497057 6.4:+63589224 MS.gene66306:CDS
TATACAAAAGTGTTGTGCAT+AGG 0.502505 6.4:+63590076 MS.gene66306:CDS
CCATTAAGAATAAGGCCAAT+GGG 0.508737 6.4:+63590274 MS.gene66306:CDS
ACCTCTTGGCTATCTCAGAT+TGG 0.513980 6.4:-63589316 None:intergenic
CAGATGATGAGTGAAAATCT+TGG 0.514187 6.4:+63589606 MS.gene66306:CDS
TATCCAAGTAATTATTGCTA+TGG 0.517995 6.4:+63590192 MS.gene66306:CDS
GATTGAGAACCATGACATTG+AGG 0.522032 6.4:+63589223 MS.gene66306:intron
TCCATTAAGAATAAGGCCAA+TGG 0.527861 6.4:+63590273 MS.gene66306:CDS
AGAACACCTGTGATGTTGAC+TGG 0.531587 6.4:+63589351 MS.gene66306:CDS
CTAAGAGAACATACAGATGC+TGG 0.535915 6.4:+63589744 MS.gene66306:CDS
TCACCATAGCAATAATTACT+TGG 0.538943 6.4:-63590195 None:intergenic
CTTCAAGATGACAAAGTACC+TGG 0.540243 6.4:+63589783 MS.gene66306:CDS
AATAATAATGGACCAGCTAT+GGG 0.543717 6.4:+63589669 MS.gene66306:CDS
TCAGCTTCCCCTCAATGTCA+TGG 0.554265 6.4:-63589232 None:intergenic
TGACATTGAGGGGAAGCTGA+TGG 0.556135 6.4:+63589235 MS.gene66306:CDS
ATCTGAGATAGCCAAGAGGT+TGG 0.561844 6.4:+63589319 MS.gene66306:CDS
CAAATTGAAGTGTTGAGCAA+TGG 0.562361 6.4:+63590051 MS.gene66306:CDS
TGAGGGGAAGCTGATGGAGA+AGG 0.573717 6.4:+63589241 MS.gene66306:CDS
ACCAGCTATGGGAACAAAAG+TGG 0.582336 6.4:+63589680 MS.gene66306:CDS
GGATACGAGAGTTTAGGAGC+TGG 0.585193 6.4:-63590174 None:intergenic
TTACTATGAAGAAAATCTGA+AGG 0.594001 6.4:+63589283 MS.gene66306:CDS
ACTCTCAATGGTGACAAAAG+AGG 0.595016 6.4:+63589029 MS.gene66306:CDS
AGGGTGATTCCTGATAAGAA+TGG 0.598709 6.4:+63590096 MS.gene66306:CDS
GTGTAAATGCAGCGAAACAA+TGG 0.601045 6.4:+63589539 MS.gene66306:intron
GTAGTAGTACTAGTTCCCAT+TGG 0.601509 6.4:-63590289 None:intergenic
ATTCTGGATATGGACATTCA+GGG 0.602948 6.4:-63589710 None:intergenic
AGAGTGCTAAAATCTATCAC+AGG 0.607878 6.4:-63589011 None:intergenic
TTGAGAACCATGACATTGAG+GGG 0.639790 6.4:+63589225 MS.gene66306:CDS
ACTTTCCCAGTCAACATCAC+AGG 0.639833 6.4:-63589357 None:intergenic
AATGCAATCTTTGTCAACAC+AGG 0.645759 6.4:+63589858 MS.gene66306:CDS
AGAGAACATACAGATGCTGG+TGG 0.658975 6.4:+63589747 MS.gene66306:CDS
GAACACCTGTGATGTTGACT+GGG 0.666248 6.4:+63589352 MS.gene66306:CDS
TCTTTGAAGAATTCAAGACC+AGG 0.676121 6.4:-63589801 None:intergenic
GAAAATTCCAAACCTCTCTG+AGG 0.679494 6.4:+63589418 MS.gene66306:CDS
ACCAATCTGAGATAGCCAAG+AGG 0.699692 6.4:+63589315 MS.gene66306:CDS
CTAACCAAAGCTCCTCAGAG+AGG 0.716992 6.4:-63589430 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! ATTTTCTAAATAATCTTAAC+AGG + chr6.4:63590024-63590043 MS.gene66306:intron 15.0%
!!! TGTAACATATAGTATTTTTT+TGG + chr6.4:63589166-63589185 MS.gene66306:intron 15.0%
!!! TTAATGTTACATTTTTCTTT+TGG + chr6.4:63589134-63589153 MS.gene66306:intron 15.0%
!! AAGTGAATAAACATTTATGT+TGG + chr6.4:63589107-63589126 MS.gene66306:intron 20.0%
!! ATTTGAATCCATTAAGAATA+AGG + chr6.4:63590266-63590285 MS.gene66306:CDS 20.0%
!!! TTTTCAGGAAGTAATAATAA+TGG + chr6.4:63589657-63589676 MS.gene66306:CDS 20.0%
! AATTCTTCAAAGATGGAAAA+TGG + chr6.4:63589811-63589830 MS.gene66306:CDS 25.0%
! CATTGAAAAATTAGTTCAAG+TGG + chr6.4:63589569-63589588 MS.gene66306:CDS 25.0%
! CTTTATGGAAAAACTAAGTT+TGG + chr6.4:63590228-63590247 MS.gene66306:CDS 25.0%
! TATCCAAGTAATTATTGCTA+TGG + chr6.4:63590192-63590211 MS.gene66306:CDS 25.0%
! TTACTATGAAGAAAATCTGA+AGG + chr6.4:63589283-63589302 MS.gene66306:CDS 25.0%
!! AAAAACTAAGTTTGGTGATA+AGG + chr6.4:63590236-63590255 MS.gene66306:CDS 25.0%
!! AAAACTAAGTTTGGTGATAA+GGG + chr6.4:63590237-63590256 MS.gene66306:CDS 25.0%
!!! AAGATTGCATTGTTTTTTGA+AGG - chr6.4:63589849-63589868 None:intergenic 25.0%
!!! TGTGTTTCTCTATTTTAAAC+CGG + chr6.4:63589494-63589513 MS.gene66306:intron 25.0%
!!! TTCTTAATGGATTCAAATCT+AGG - chr6.4:63590264-63590283 None:intergenic 25.0%
ATTAAACTTTGACACTGACA+CGG - chr6.4:63590003-63590022 None:intergenic 30.0%
GAAATAATAGCTTCACCAAT+TGG - chr6.4:63590153-63590172 None:intergenic 30.0%
GCAAGTTTCTATAATCCAAT+TGG + chr6.4:63590135-63590154 MS.gene66306:CDS 30.0%
TCACCATAGCAATAATTACT+TGG - chr6.4:63590198-63590217 None:intergenic 30.0%
TTATTGCTATGGTGACTATT+TGG + chr6.4:63590203-63590222 MS.gene66306:CDS 30.0%
! ATTTTCCTAATGTTAGACGT+CGG - chr6.4:63589404-63589423 None:intergenic 30.0%
! TACATAAAGACAGCATTTTC+AGG + chr6.4:63589642-63589661 MS.gene66306:CDS 30.0%
!! AATAATAATGGACCAGCTAT+GGG + chr6.4:63589669-63589688 MS.gene66306:CDS 30.0%
!! ATACAAAAGTGTTGTGCATA+GGG + chr6.4:63590077-63590096 MS.gene66306:CDS 30.0%
!! ATAGATTTTAGCACTCTCAA+TGG + chr6.4:63589017-63589036 MS.gene66306:CDS 30.0%
!! TAATAATAATGGACCAGCTA+TGG + chr6.4:63589668-63589687 MS.gene66306:CDS 30.0%
!! TATACAAAAGTGTTGTGCAT+AGG + chr6.4:63590076-63590095 MS.gene66306:CDS 30.0%
!!! ATTGCATTGTTTTTTGAAGG+TGG - chr6.4:63589846-63589865 None:intergenic 30.0%
AATGCAATCTTTGTCAACAC+AGG + chr6.4:63589858-63589877 MS.gene66306:CDS 35.0%
AATTCTGGATATGGACATTC+AGG - chr6.4:63589714-63589733 None:intergenic 35.0%
AGTCTACTTCCATTCTTATC+AGG - chr6.4:63590108-63590127 None:intergenic 35.0%
ATAGAGAAACACACGATGTT+TGG - chr6.4:63589487-63589506 None:intergenic 35.0%
ATTCTGGATATGGACATTCA+GGG - chr6.4:63589713-63589732 None:intergenic 35.0%
ATTGAGAACCATGACATTGA+GGG + chr6.4:63589224-63589243 MS.gene66306:CDS 35.0%
CAGATGATGAGTGAAAATCT+TGG + chr6.4:63589606-63589625 MS.gene66306:CDS 35.0%
CATGAAGCTTGTCAAAAATG+GGG + chr6.4:63589071-63589090 MS.gene66306:CDS 35.0%
CATTGCTCAACACTTCAATT+TGG - chr6.4:63590053-63590072 None:intergenic 35.0%
CCATTAAGAATAAGGCCAAT+GGG + chr6.4:63590274-63590293 MS.gene66306:CDS 35.0%
CTTTGTCATCTTGAAGCAAT+AGG - chr6.4:63589779-63589798 None:intergenic 35.0%
GATGAGTGAAAATCTTGGTT+TGG + chr6.4:63589611-63589630 MS.gene66306:CDS 35.0%
GCATGAAGCTTGTCAAAAAT+GGG + chr6.4:63589070-63589089 MS.gene66306:CDS 35.0%
GGGAAAGTTCATTCTTCATT+TGG + chr6.4:63589372-63589391 MS.gene66306:CDS 35.0%
GGTCTTGAATTCTTCAAAGA+TGG + chr6.4:63589804-63589823 MS.gene66306:CDS 35.0%
TATTGTTAGAACAACAGCTC+CGG - chr6.4:63589516-63589535 None:intergenic 35.0%
TCCATTAAGAATAAGGCCAA+TGG + chr6.4:63590273-63590292 MS.gene66306:CDS 35.0%
TGAATGTCCATATCCAGAAT+TGG + chr6.4:63589713-63589732 MS.gene66306:CDS 35.0%
TGACAAAAGAGGTGAAACTA+TGG + chr6.4:63589040-63589059 MS.gene66306:CDS 35.0%
TGCATGAAGCTTGTCAAAAA+TGG + chr6.4:63589069-63589088 MS.gene66306:CDS 35.0%
TTACTTGGATACGAGAGTTT+AGG - chr6.4:63590183-63590202 None:intergenic 35.0%
! AGAGTGCTAAAATCTATCAC+AGG - chr6.4:63589014-63589033 None:intergenic 35.0%
! TCTTTGAAGAATTCAAGACC+AGG - chr6.4:63589804-63589823 None:intergenic 35.0%
!! CAAATTGAAGTGTTGAGCAA+TGG + chr6.4:63590051-63590070 MS.gene66306:CDS 35.0%
ACTCTCAATGGTGACAAAAG+AGG + chr6.4:63589029-63589048 MS.gene66306:CDS 40.0%
AGGGTGATTCCTGATAAGAA+TGG + chr6.4:63590096-63590115 MS.gene66306:CDS 40.0%
CCATATCCAGAATTGGTTAG+AGG + chr6.4:63589720-63589739 MS.gene66306:CDS 40.0%
CCTCTAACCAATTCTGGATA+TGG - chr6.4:63589723-63589742 None:intergenic 40.0%
CTAAGAGAACATACAGATGC+TGG + chr6.4:63589744-63589763 MS.gene66306:CDS 40.0%
CTTAGTCCTCTAACCAATTC+TGG - chr6.4:63589729-63589748 None:intergenic 40.0%
GAAAATTCCAAACCTCTCTG+AGG + chr6.4:63589418-63589437 MS.gene66306:CDS 40.0%
GATTGAGAACCATGACATTG+AGG + chr6.4:63589223-63589242 MS.gene66306:intron 40.0%
GTGTAAATGCAGCGAAACAA+TGG + chr6.4:63589539-63589558 MS.gene66306:intron 40.0%
TTGAGAACCATGACATTGAG+GGG + chr6.4:63589225-63589244 MS.gene66306:CDS 40.0%
! CTTCAAGATGACAAAGTACC+TGG + chr6.4:63589783-63589802 MS.gene66306:CDS 40.0%
! GGTGACTATTTGGAGCTTTA+TGG + chr6.4:63590213-63590232 MS.gene66306:CDS 40.0%
! TCAAAAATGGGGTTGCTTTC+TGG + chr6.4:63589082-63589101 MS.gene66306:CDS 40.0%
!! CCCATTGGCCTTATTCTTAA+TGG - chr6.4:63590277-63590296 None:intergenic 40.0%
ACCAGCTATGGGAACAAAAG+TGG + chr6.4:63589680-63589699 MS.gene66306:CDS 45.0%
ACCTCTTGGCTATCTCAGAT+TGG - chr6.4:63589319-63589338 None:intergenic 45.0%
ACTTTCCCAGTCAACATCAC+AGG - chr6.4:63589360-63589379 None:intergenic 45.0%
AGAACACCTGTGATGTTGAC+TGG + chr6.4:63589351-63589370 MS.gene66306:CDS 45.0%
AGAGAACATACAGATGCTGG+TGG + chr6.4:63589747-63589766 MS.gene66306:CDS 45.0%
ATCGTCCGACGTCTAACATT+AGG + chr6.4:63589396-63589415 MS.gene66306:CDS 45.0%
! ACCAATCTGAGATAGCCAAG+AGG + chr6.4:63589315-63589334 MS.gene66306:CDS 45.0%
! ATCTGAGATAGCCAAGAGGT+TGG + chr6.4:63589319-63589338 MS.gene66306:CDS 45.0%
! GAACACCTGTGATGTTGACT+GGG + chr6.4:63589352-63589371 MS.gene66306:CDS 45.0%
!!! CTGCTTTTTCTCCAACCTCT+TGG - chr6.4:63589333-63589352 None:intergenic 45.0%
CAAAGCTCCTCAGAGAGGTT+TGG - chr6.4:63589428-63589447 None:intergenic 50.0%
CTAACCAAAGCTCCTCAGAG+AGG - chr6.4:63589433-63589452 None:intergenic 50.0%
CTTCTGATCGAACGTGTGTC+TGG + chr6.4:63589923-63589942 MS.gene66306:intron 50.0%
GCTGATGGAGAAGGTGAAGA+AGG + chr6.4:63589250-63589269 MS.gene66306:CDS 50.0%
GGATACGAGAGTTTAGGAGC+TGG - chr6.4:63590177-63590196 None:intergenic 50.0%
TCAGCTTCCCCTCAATGTCA+TGG - chr6.4:63589235-63589254 None:intergenic 50.0%
TGACATTGAGGGGAAGCTGA+TGG + chr6.4:63589235-63589254 MS.gene66306:CDS 50.0%
! CAAACCTCTCTGAGGAGCTT+TGG + chr6.4:63589426-63589445 MS.gene66306:CDS 50.0%
!!! GCCACTTTTGTTCCCATAGC+TGG - chr6.4:63589684-63589703 None:intergenic 50.0%
TGAGGGGAAGCTGATGGAGA+AGG + chr6.4:63589241-63589260 MS.gene66306:CDS 55.0%


Chromosome Type Strat End Strand Name
chr6.4 gene 63589002 63590302 63589002 ID=MS.gene66306
chr6.4 mRNA 63589002 63590302 63589002 ID=MS.gene66306.t1;Parent=MS.gene66306
chr6.4 exon 63589002 63589103 63589002 ID=MS.gene66306.t1.exon1;Parent=MS.gene66306.t1
chr6.4 CDS 63589002 63589103 63589002 ID=cds.MS.gene66306.t1;Parent=MS.gene66306.t1
chr6.4 exon 63589224 63589447 63589224 ID=MS.gene66306.t1.exon2;Parent=MS.gene66306.t1
chr6.4 CDS 63589224 63589447 63589224 ID=cds.MS.gene66306.t1;Parent=MS.gene66306.t1
chr6.4 exon 63589551 63589879 63589551 ID=MS.gene66306.t1.exon3;Parent=MS.gene66306.t1
chr6.4 CDS 63589551 63589879 63589551 ID=cds.MS.gene66306.t1;Parent=MS.gene66306.t1
chr6.4 exon 63590046 63590302 63590046 ID=MS.gene66306.t1.exon4;Parent=MS.gene66306.t1
chr6.4 CDS 63590046 63590302 63590046 ID=cds.MS.gene66306.t1;Parent=MS.gene66306.t1
Gene Sequence

>MS.gene66306

ATGGCAATTCCTGTGATAGATTTTAGCACTCTCAATGGTGACAAAAGAGGTGAAACTATGGCTCTTTTGCATGAAGCTTGTCAAAAATGGGGTTGCTTTCTGGTAAAGTGAATAAACATTTATGTTGGTTTATTAATGTTACATTTTTCTTTTGGTGCTTTTAATGTAACATATAGTATTTTTTTGGTGCTTTTAATGTAACATAACATGTTACTTGTGCAGATTGAGAACCATGACATTGAGGGGAAGCTGATGGAGAAGGTGAAGAAGGTAATTAATAGTTACTATGAAGAAAATCTGAAGGAAAGTTTTTACCAATCTGAGATAGCCAAGAGGTTGGAGAAAAAGCAGAACACCTGTGATGTTGACTGGGAAAGTTCATTCTTCATTTGGCATCGTCCGACGTCTAACATTAGGAAAATTCCAAACCTCTCTGAGGAGCTTTGGTTAGTCTATTCAAATTCTAACATCTGTTAACGTTACCAAACATCGTGTGTTTCTCTATTTTAAACCGGAGCTGTTGTTCTAACAATATGTGTGTAAATGCAGCGAAACAATGGACGAGTACATTGAAAAATTAGTTCAAGTGGCAGAGACATTATCTCAGATGATGAGTGAAAATCTTGGTTTGGAGAAAGATTACATAAAGACAGCATTTTCAGGAAGTAATAATAATGGACCAGCTATGGGAACAAAAGTGGCAAAGTACCCTGAATGTCCATATCCAGAATTGGTTAGAGGACTAAGAGAACATACAGATGCTGGTGGAATCATCCTATTGCTTCAAGATGACAAAGTACCTGGTCTTGAATTCTTCAAAGATGGAAAATGGATTGAGATACCACCTTCAAAAAACAATGCAATCTTTGTCAACACAGGTATTTGAACTATTGTAAATAACTCATCTATGTAGCACTGACACTTCTGATCGAACGTGTGTCTGGTGTCTGACACATGTGATTACATTCAATTAATTAATATTTTAATTATCAGTGTCACCGTGTCAGTGTCAAAGTTTAATCATTTTCTAAATAATCTTAACAGGTGACCAAATTGAAGTGTTGAGCAATGGTTTATACAAAAGTGTTGTGCATAGGGTGATTCCTGATAAGAATGGAAGTAGACTATCTATTGCAAGTTTCTATAATCCAATTGGTGAAGCTATTATTTCTCCAGCTCCTAAACTCTCGTATCCAAGTAATTATTGCTATGGTGACTATTTGGAGCTTTATGGAAAAACTAAGTTTGGTGATAAGGGTCCTAGATTTGAATCCATTAAGAATAAGGCCAATGGGAACTAG
Protein sequence

>MS.gene66306.t1

MAIPVIDFSTLNGDKRGETMALLHEACQKWGCFLIENHDIEGKLMEKVKKVINSYYEENLKESFYQSEIAKRLEKKQNTCDVDWESSFFIWHRPTSNIRKIPNLSEELCETMDEYIEKLVQVAETLSQMMSENLGLEKDYIKTAFSGSNNNGPAMGTKVAKYPECPYPELVRGLREHTDAGGIILLLQDDKVPGLEFFKDGKWIEIPPSKNNAIFVNTGDQIEVLSNGLYKSVVHRVIPDKNGSRLSIASFYNPIGEAIISPAPKLSYPSNYCYGDYLELYGKTKFGDKGPRFESIKNKANGN