Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66632.t1 | XP_024638296.1 | 97.4 | 154 | 4 | 0 | 1 | 154 | 1 | 154 | 7.90E-78 | 299.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66632.t1 | Q54SW1 | 28.8 | 139 | 89 | 3 | 9 | 141 | 6 | 140 | 1.4e-09 | 64.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66632.t1 | I3SJM8 | 97.4 | 154 | 4 | 0 | 1 | 154 | 1 | 154 | 5.7e-78 | 299.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene46429 | MS.gene66632 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66632.t1 | MTR_4g050400 | 93.701 | 127 | 8 | 0 | 1 | 127 | 1 | 127 | 6.97e-70 | 208 |
| MS.gene66632.t1 | MTR_1g055425 | 56.000 | 125 | 55 | 0 | 30 | 154 | 31 | 155 | 6.19e-48 | 152 |
| MS.gene66632.t1 | MTR_1g055435 | 56.000 | 125 | 55 | 0 | 30 | 154 | 32 | 156 | 7.45e-45 | 144 |
| MS.gene66632.t1 | MTR_5g085900 | 43.077 | 130 | 72 | 1 | 27 | 154 | 33 | 162 | 9.12e-34 | 116 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66632.t1 | AT3G44100 | 61.765 | 136 | 51 | 1 | 16 | 151 | 15 | 149 | 7.59e-55 | 170 |
| MS.gene66632.t1 | AT3G11780 | 50.694 | 144 | 71 | 0 | 11 | 154 | 10 | 153 | 4.75e-48 | 152 |
| MS.gene66632.t1 | AT5G06480 | 51.163 | 129 | 63 | 0 | 26 | 154 | 25 | 153 | 4.17e-44 | 142 |
| MS.gene66632.t1 | AT3G11780 | 45.062 | 162 | 71 | 1 | 11 | 154 | 10 | 171 | 1.08e-43 | 142 |
Find 44 sgRNAs with CRISPR-Local
Find 308 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGCAGGTAAAGCTCTTTA+TGG | 0.233971 | 4.3:+49342604 | MS.gene66632:intron |
| TAAATTTAATGCAAGTTAAC+TGG | 0.302105 | 4.3:-49345961 | None:intergenic |
| TATGGCGGAGATGTGGTAAT+TGG | 0.323192 | 4.3:+49342622 | MS.gene66632:CDS |
| TTTAAGATCTCTGCTACTTC+TGG | 0.355840 | 4.3:+49341841 | MS.gene66632:CDS |
| TAATTGGAGTTTCCTATGTT+GGG | 0.358950 | 4.3:+49342638 | MS.gene66632:CDS |
| GCAGGGGCACCACTGACAAC+AGG | 0.374041 | 4.3:-49341814 | None:intergenic |
| ACAAAATTTCCATTAGCAAC+TGG | 0.385673 | 4.3:-49342709 | None:intergenic |
| AGTGTCATCTTTAGAGCATA+AGG | 0.394451 | 4.3:-49345920 | None:intergenic |
| GTATCCTGTCCAGTTGCTAA+TGG | 0.399485 | 4.3:+49342700 | MS.gene66632:CDS |
| GGGTGGAGAAGGAGAGAAGA+AGG | 0.401471 | 4.3:-49341513 | None:intergenic |
| TGAAAGGAAGAGGGTGGAGA+AGG | 0.431347 | 4.3:-49341524 | None:intergenic |
| AGAAGTAGCAGAGATCTTAA+AGG | 0.442285 | 4.3:-49341839 | None:intergenic |
| GTAATTGGAGTTTCCTATGT+TGG | 0.445028 | 4.3:+49342637 | MS.gene66632:CDS |
| GCACCACTGACAACAGGGTT+TGG | 0.451179 | 4.3:-49341808 | None:intergenic |
| GCAGAGATCTTAAAGGTGGC+AGG | 0.457064 | 4.3:-49341832 | None:intergenic |
| GAGTAATTGCAGGTAGTGTC+TGG | 0.460782 | 4.3:-49342744 | None:intergenic |
| TCAATACCAGTCACCTTCAC+AGG | 0.469125 | 4.3:-49341778 | None:intergenic |
| ATCTGTGTATGTAGATAAGA+AGG | 0.477363 | 4.3:+49341747 | MS.gene66632:intron |
| TACTTCCTTACACAGATCAA+TGG | 0.478210 | 4.3:-49342680 | None:intergenic |
| TGAAACCATTGATCTGTGTA+AGG | 0.498467 | 4.3:+49342675 | MS.gene66632:CDS |
| GATTATCCTGTGAAGGTGAC+TGG | 0.505428 | 4.3:+49341772 | MS.gene66632:CDS |
| ATTTCCATTAGCAACTGGAC+AGG | 0.518555 | 4.3:-49342704 | None:intergenic |
| TAACTTTAGCTTGAGATGAA+AGG | 0.521399 | 4.3:-49341540 | None:intergenic |
| ACAGATCAATGGTTTCAGAA+TGG | 0.526306 | 4.3:-49342669 | None:intergenic |
| TAGCTTGAGATGAAAGGAAG+AGG | 0.538470 | 4.3:-49341534 | None:intergenic |
| ATGGACAGGCACCCCAACAT+AGG | 0.561157 | 4.3:-49342650 | None:intergenic |
| TTGAGATGAAAGGAAGAGGG+TGG | 0.564807 | 4.3:-49341530 | None:intergenic |
| TGCTCTAAAGATGACACTGA+AGG | 0.572941 | 4.3:+49345925 | MS.gene66632:CDS |
| AGAGATCTTAAAGGTGGCAG+GGG | 0.585377 | 4.3:-49341830 | None:intergenic |
| CAGAGATCTTAAAGGTGGCA+GGG | 0.587442 | 4.3:-49341831 | None:intergenic |
| AGCTCTTTATGGCGGAGATG+TGG | 0.589630 | 4.3:+49342615 | MS.gene66632:CDS |
| CTAACCGGTGGAGTAATTGC+AGG | 0.597019 | 4.3:-49342754 | None:intergenic |
| AATTGGAGTTTCCTATGTTG+GGG | 0.597198 | 4.3:+49342639 | MS.gene66632:CDS |
| AGCTTGAGATGAAAGGAAGA+GGG | 0.607072 | 4.3:-49341533 | None:intergenic |
| GAAGGCAGATTATCCTGTGA+AGG | 0.607265 | 4.3:+49341765 | MS.gene66632:CDS |
| AAAGTTACTTTCAAATATTG+CGG | 0.619789 | 4.3:+49341556 | MS.gene66632:CDS |
| ACTACCTGCAATTACTCCAC+CGG | 0.625559 | 4.3:+49342750 | MS.gene66632:CDS |
| CAGGGGCACCACTGACAACA+GGG | 0.629803 | 4.3:-49341813 | None:intergenic |
| AGTAGCAGAGATCTTAAAGG+TGG | 0.633643 | 4.3:-49341836 | None:intergenic |
| TCAATGGTTTCAGAATGGAC+AGG | 0.634798 | 4.3:-49342664 | None:intergenic |
| TTACCAAACCCTGTTGTCAG+TGG | 0.649255 | 4.3:+49341805 | MS.gene66632:CDS |
| GATGACACTGAAGGATGACA+AGG | 0.657728 | 4.3:+49345934 | MS.gene66632:CDS |
| GCAGGTAAAGCTCTTTATGG+CGG | 0.686450 | 4.3:+49342607 | MS.gene66632:intron |
| ATGACACTGAAGGATGACAA+GGG | 0.715369 | 4.3:+49345935 | MS.gene66632:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AGATAATTTAAAAAATTGTA+GGG | + | chr4.3:49344588-49344607 | MS.gene66632:intron | 10.0% |
| !!! | TGTTTTAATAATTTTTTACT+TGG | + | chr4.3:49345829-49345848 | MS.gene66632:intron | 10.0% |
| !!! | TTTAATTTTAAAATCGTTTT+CGG | + | chr4.3:49345980-49345999 | MS.gene66632:CDS | 10.0% |
| !! | GAGATAATTTAAAAAATTGT+AGG | + | chr4.3:49344587-49344606 | MS.gene66632:intron | 15.0% |
| !! | GATAATTTAAAAAATTGTAG+GGG | + | chr4.3:49344589-49344608 | MS.gene66632:intron | 15.0% |
| !!! | AATTTTTGTTTTACTTTACA+AGG | + | chr4.3:49343017-49343036 | MS.gene66632:intron | 15.0% |
| !!! | ACTATAAAAGTAAATTTTTG+GGG | + | chr4.3:49343727-49343746 | MS.gene66632:intron | 15.0% |
| !!! | ACTTTATATAACTTTGATTT+TGG | + | chr4.3:49342916-49342935 | MS.gene66632:intron | 15.0% |
| !!! | CACTATAAAAGTAAATTTTT+GGG | + | chr4.3:49343726-49343745 | MS.gene66632:intron | 15.0% |
| !!! | TACTAATTTACATATTTTGT+TGG | - | chr4.3:49344400-49344419 | None:intergenic | 15.0% |
| !!! | TCACTATAAAAGTAAATTTT+TGG | + | chr4.3:49343725-49343744 | MS.gene66632:intron | 15.0% |
| !!! | TTTTTTCATAATACTGAATT+GGG | - | chr4.3:49341649-49341668 | None:intergenic | 15.0% |
| !! | AAAAAAAACATTCAGAGAAA+AGG | - | chr4.3:49344652-49344671 | None:intergenic | 20.0% |
| !! | AAAAAACTGAACCATTTAAA+TGG | - | chr4.3:49345388-49345407 | None:intergenic | 20.0% |
| !! | AAAACTAAGAAATTTGATAG+TGG | + | chr4.3:49343761-49343780 | MS.gene66632:intron | 20.0% |
| !! | AATGATTGAGGAATAAAAAA+TGG | - | chr4.3:49344812-49344831 | None:intergenic | 20.0% |
| !! | ACATGTTATAACATATTGAA+AGG | - | chr4.3:49343109-49343128 | None:intergenic | 20.0% |
| !! | AGATATATACTTGAAAATTG+CGG | + | chr4.3:49341996-49342015 | MS.gene66632:intron | 20.0% |
| !! | CAAAAATGATGATTGAATAA+AGG | + | chr4.3:49344860-49344879 | MS.gene66632:intron | 20.0% |
| !! | TAAATTTAATGCAAGTTAAC+TGG | - | chr4.3:49345964-49345983 | None:intergenic | 20.0% |
| !! | TGTTAAAAACAAGATAGAAA+AGG | - | chr4.3:49345873-49345892 | None:intergenic | 20.0% |
| !! | TTAAGTTTGGTTAATTGAAT+TGG | + | chr4.3:49345336-49345355 | MS.gene66632:intron | 20.0% |
| !! | TTGACATACAAAAAAAGATA+AGG | + | chr4.3:49344442-49344461 | MS.gene66632:intron | 20.0% |
| !!! | AAAGTTACTTTCAAATATTG+CGG | + | chr4.3:49341556-49341575 | MS.gene66632:CDS | 20.0% |
| !!! | AAGATTAGTTTAATTACTCT+TGG | - | chr4.3:49343058-49343077 | None:intergenic | 20.0% |
| !!! | ATTGAATTGGTTTAAATTTG+TGG | + | chr4.3:49345349-49345368 | MS.gene66632:intron | 20.0% |
| !!! | CCATTTTCTCAAATTATTAA+CGG | - | chr4.3:49343904-49343923 | None:intergenic | 20.0% |
| !!! | CTATAAAAGTAAATTTTTGG+GGG | + | chr4.3:49343728-49343747 | MS.gene66632:intron | 20.0% |
| !!! | CTTTTTTCATAATACTGAAT+TGG | - | chr4.3:49341650-49341669 | None:intergenic | 20.0% |
| !!! | GTTAACGTATTTTAAATAAG+TGG | - | chr4.3:49342123-49342142 | None:intergenic | 20.0% |
| !!! | TAAATGGTTCAGTTTTTTTA+TGG | + | chr4.3:49345390-49345409 | MS.gene66632:intron | 20.0% |
| !!! | TATAAAAGTAAATTTTTGGG+GGG | + | chr4.3:49343729-49343748 | MS.gene66632:intron | 20.0% |
| !!! | TTACTTGGATCTTTTATTTA+GGG | + | chr4.3:49345844-49345863 | MS.gene66632:intron | 20.0% |
| !!! | TTTACTTGGATCTTTTATTT+AGG | + | chr4.3:49345843-49345862 | MS.gene66632:intron | 20.0% |
| ! | AAACAGATTGAAAGAAAATG+TGG | - | chr4.3:49345807-49345826 | None:intergenic | 25.0% |
| ! | AACAATACTTATCTTGCTTT+AGG | + | chr4.3:49345235-49345254 | MS.gene66632:intron | 25.0% |
| ! | AACCACTATGATGTAATTAA+CGG | - | chr4.3:49344074-49344093 | None:intergenic | 25.0% |
| ! | AAGTGGTTAATTACATTAAG+TGG | - | chr4.3:49342106-49342125 | None:intergenic | 25.0% |
| ! | AATTTAGTAGAATAGACAAG+TGG | - | chr4.3:49342559-49342578 | None:intergenic | 25.0% |
| ! | ACAATACTTATCTTGCTTTA+GGG | + | chr4.3:49345236-49345255 | MS.gene66632:intron | 25.0% |
| ! | AGATGATAGAATATAGATGA+GGG | + | chr4.3:49345116-49345135 | MS.gene66632:intron | 25.0% |
| ! | ATCAAATTCCAACATCAATT+TGG | + | chr4.3:49341945-49341964 | MS.gene66632:intron | 25.0% |
| ! | ATTGAAGTTATAAACCCAAA+AGG | - | chr4.3:49343000-49343019 | None:intergenic | 25.0% |
| ! | CAATCAACACATAAAAATCA+GGG | - | chr4.3:49342317-49342336 | None:intergenic | 25.0% |
| ! | CCGTTAATAATTTGAGAAAA+TGG | + | chr4.3:49343901-49343920 | MS.gene66632:intron | 25.0% |
| ! | GATAAGGAACAAATATATTG+AGG | + | chr4.3:49344458-49344477 | MS.gene66632:intron | 25.0% |
| ! | TAAGTCCATTCTATTACTTT+CGG | - | chr4.3:49345056-49345075 | None:intergenic | 25.0% |
| ! | TAATTACATCATAGTGGTTA+GGG | + | chr4.3:49344075-49344094 | MS.gene66632:intron | 25.0% |
| ! | TAGATGATAGAATATAGATG+AGG | + | chr4.3:49345115-49345134 | MS.gene66632:intron | 25.0% |
| ! | TATTGAGGAAAAAGTTAGAA+TGG | + | chr4.3:49344473-49344492 | MS.gene66632:intron | 25.0% |
| ! | TCAAATGAATATTCTACTGT+AGG | + | chr4.3:49344320-49344339 | MS.gene66632:intron | 25.0% |
| ! | TTAAAAAGGAAAGAAAGTGA+TGG | - | chr4.3:49341594-49341613 | None:intergenic | 25.0% |
| ! | TTAAAATGTCAAACGTCATT+TGG | + | chr4.3:49343079-49343098 | MS.gene66632:intron | 25.0% |
| ! | TTAAAATTTCTGTGTACCAA+TGG | + | chr4.3:49345670-49345689 | MS.gene66632:intron | 25.0% |
| ! | TTAACTATCCAAATTGATGT+TGG | - | chr4.3:49341956-49341975 | None:intergenic | 25.0% |
| ! | TTAAGTATCTTGGATCTATT+AGG | + | chr4.3:49344241-49344260 | MS.gene66632:intron | 25.0% |
| ! | TTAATTACATCATAGTGGTT+AGG | + | chr4.3:49344074-49344093 | MS.gene66632:intron | 25.0% |
| ! | TTCAAACCATATAATTAACG+TGG | - | chr4.3:49345713-49345732 | None:intergenic | 25.0% |
| ! | TTGAAGTTATAAACCCAAAA+GGG | - | chr4.3:49342999-49343018 | None:intergenic | 25.0% |
| !! | TATTTGTTCCTTATGCTTTT+GGG | + | chr4.3:49342510-49342529 | MS.gene66632:intron | 25.0% |
| !! | TGTTTTACTTTACAAGGTTA+AGG | + | chr4.3:49343023-49343042 | MS.gene66632:intron | 25.0% |
| !!! | AGAGAAAAGGTCTTTTTTAA+TGG | - | chr4.3:49344639-49344658 | None:intergenic | 25.0% |
| !!! | CTTCCTTTGATATCTTTTTT+GGG | + | chr4.3:49342851-49342870 | MS.gene66632:intron | 25.0% |
| !!! | GTGTTATTTTGACATCAAAT+TGG | - | chr4.3:49342149-49342168 | None:intergenic | 25.0% |
| !!! | TAGGTCAGAGTTTTTTTTAT+TGG | + | chr4.3:49345581-49345600 | MS.gene66632:intron | 25.0% |
| !!! | TATTTTGACATCAAATTGGA+TGG | - | chr4.3:49342145-49342164 | None:intergenic | 25.0% |
| !!! | TGACTTTTGATTTTACATGT+AGG | - | chr4.3:49343376-49343395 | None:intergenic | 25.0% |
| !!! | TTATATTTCTAGAATGCCTT+CGG | - | chr4.3:49342813-49342832 | None:intergenic | 25.0% |
| AAAAGCAGGTGTATTGTAAA+AGG | + | chr4.3:49343161-49343180 | MS.gene66632:intron | 30.0% | |
| AAAGTTCCAGACAAAAAACA+TGG | - | chr4.3:49344763-49344782 | None:intergenic | 30.0% | |
| AAATCAATTATGTGAGAGCA+AGG | - | chr4.3:49343200-49343219 | None:intergenic | 30.0% | |
| AAATCATGGTTAATCGTGTT+TGG | + | chr4.3:49342032-49342051 | MS.gene66632:intron | 30.0% | |
| AACCATATAATTAACGTGGA+TGG | - | chr4.3:49345709-49345728 | None:intergenic | 30.0% | |
| AATCATTTGTCATTACCCAT+TGG | + | chr4.3:49344825-49344844 | MS.gene66632:intron | 30.0% | |
| AATGAATATTCTACTGTAGG+TGG | + | chr4.3:49344323-49344342 | MS.gene66632:intron | 30.0% | |
| ACAAAATTTCCATTAGCAAC+TGG | - | chr4.3:49342712-49342731 | None:intergenic | 30.0% | |
| ACCACTATGATGTAATTAAC+GGG | - | chr4.3:49344073-49344092 | None:intergenic | 30.0% | |
| ACGGAATGATGCAATTAAAA+AGG | - | chr4.3:49341608-49341627 | None:intergenic | 30.0% | |
| ACTCTGATACATATTGAACA+CGG | + | chr4.3:49343966-49343985 | MS.gene66632:intron | 30.0% | |
| AGATTTGTGACTACAATCTA+AGG | - | chr4.3:49342284-49342303 | None:intergenic | 30.0% | |
| ATCTGTGTATGTAGATAAGA+AGG | + | chr4.3:49341747-49341766 | MS.gene66632:intron | 30.0% | |
| CAGTTCATGAACCATTTAAA+TGG | + | chr4.3:49345374-49345393 | MS.gene66632:intron | 30.0% | |
| CCAAACTTAATTCCAAAAAC+CGG | - | chr4.3:49345326-49345345 | None:intergenic | 30.0% | |
| GATCAAAAGAAGTTCAAAAC+CGG | + | chr4.3:49345304-49345323 | MS.gene66632:intron | 30.0% | |
| GCAATCAACACATAAAAATC+AGG | - | chr4.3:49342318-49342337 | None:intergenic | 30.0% | |
| GCTAATGACATTCAAAATCA+TGG | + | chr4.3:49342018-49342037 | MS.gene66632:intron | 30.0% | |
| GGAAGATGTTATTGTTCAAA+AGG | - | chr4.3:49344035-49344054 | None:intergenic | 30.0% | |
| GTAAGTGTCAAATTAATCCA+CGG | - | chr4.3:49341627-49341646 | None:intergenic | 30.0% | |
| TAATTGGAGTTTCCTATGTT+GGG | + | chr4.3:49342638-49342657 | MS.gene66632:CDS | 30.0% | |
| TAGTAGACATGACAATGTTT+AGG | + | chr4.3:49344415-49344434 | MS.gene66632:intron | 30.0% | |
| TATGGTTCAGTTTAGTGATA+TGG | + | chr4.3:49345408-49345427 | MS.gene66632:intron | 30.0% | |
| TATTCTCTAGTGTAGAACAT+TGG | - | chr4.3:49344361-49344380 | None:intergenic | 30.0% | |
| TGCTATGATGTATATTGAAG+AGG | + | chr4.3:49344103-49344122 | MS.gene66632:intron | 30.0% | |
| TGCTTAAAATGATGTAAGAG+AGG | - | chr4.3:49344150-49344169 | None:intergenic | 30.0% | |
| TGTTCTACACTAGAGAATAT+TGG | + | chr4.3:49344362-49344381 | MS.gene66632:intron | 30.0% | |
| TTAAAATGATGTAAGAGAGG+TGG | - | chr4.3:49344147-49344166 | None:intergenic | 30.0% | |
| TTAGACCGAAAGTAATAGAA+TGG | + | chr4.3:49345048-49345067 | MS.gene66632:intron | 30.0% | |
| TTATAAACCCAAAAGGGAAA+TGG | - | chr4.3:49342993-49343012 | None:intergenic | 30.0% | |
| ! | AGAATGGACTTAAGTTACTA+GGG | + | chr4.3:49345064-49345083 | MS.gene66632:intron | 30.0% |
| ! | CATCAGTTTTTCCTTCATTT+GGG | + | chr4.3:49344191-49344210 | MS.gene66632:intron | 30.0% |
| ! | CGGAAATTTTATAACTGCTA+TGG | + | chr4.3:49343495-49343514 | MS.gene66632:intron | 30.0% |
| ! | CTATTTGTTCCTTATGCTTT+TGG | + | chr4.3:49342509-49342528 | MS.gene66632:intron | 30.0% |
| ! | GATAAGTATTGTTGTGTTGA+AGG | - | chr4.3:49345228-49345247 | None:intergenic | 30.0% |
| ! | TAGAATGGACTTAAGTTACT+AGG | + | chr4.3:49345063-49345082 | MS.gene66632:intron | 30.0% |
| ! | TCATCAGTTTTTCCTTCATT+TGG | + | chr4.3:49344190-49344209 | MS.gene66632:intron | 30.0% |
| ! | TCTTTTGATCTCTTGCTTTA+GGG | - | chr4.3:49345294-49345313 | None:intergenic | 30.0% |
| ! | TGACTTTCGATTTTACATGT+AGG | - | chr4.3:49343288-49343307 | None:intergenic | 30.0% |
| ! | TTCTTTTGATCTCTTGCTTT+AGG | - | chr4.3:49345295-49345314 | None:intergenic | 30.0% |
| !! | AGAGTGTTAAGTTGATAAAG+TGG | - | chr4.3:49342782-49342801 | None:intergenic | 30.0% |
| !! | AGTATTGCTATTTGAAAAGC+AGG | + | chr4.3:49343147-49343166 | MS.gene66632:intron | 30.0% |
| !! | ATCAAAAGTCATTTTAGCAC+TGG | + | chr4.3:49343385-49343404 | MS.gene66632:intron | 30.0% |
| !! | GGAAGCTTTATTTCAAGATA+TGG | - | chr4.3:49342836-49342855 | None:intergenic | 30.0% |
| !! | GTTTTACCATGTTTTTTGTC+TGG | + | chr4.3:49344754-49344773 | MS.gene66632:intron | 30.0% |
| !! | TAACTTTAGCTTGAGATGAA+AGG | - | chr4.3:49341543-49341562 | None:intergenic | 30.0% |
| !! | TTTTTAATTGCATCATTCCG+TGG | + | chr4.3:49341607-49341626 | MS.gene66632:intron | 30.0% |
| !!! | ACATTACTGTTTGTTTTTGC+AGG | + | chr4.3:49345895-49345914 | MS.gene66632:intron | 30.0% |
| !!! | CATTACTGTTTGTTTTTGCA+GGG | + | chr4.3:49345896-49345915 | MS.gene66632:intron | 30.0% |
| !!! | CGATCATAGTTTTAAATCAC+AGG | + | chr4.3:49342176-49342195 | MS.gene66632:intron | 30.0% |
| !!! | GCTTCCTTTGATATCTTTTT+TGG | + | chr4.3:49342850-49342869 | MS.gene66632:intron | 30.0% |
| !!! | TGGCTTCTTCAAGTTTTATT+AGG | - | chr4.3:49344619-49344638 | None:intergenic | 30.0% |
| AAGGCAGTGAATCAATGTAA+TGG | + | chr4.3:49343644-49343663 | MS.gene66632:intron | 35.0% | |
| AAGGCTGTCTTTGTCTATTA+TGG | + | chr4.3:49343430-49343449 | MS.gene66632:intron | 35.0% | |
| AATCTTAGGCTATGTTTGGA+TGG | + | chr4.3:49344973-49344992 | MS.gene66632:intron | 35.0% | |
| AATTGGAGTTTCCTATGTTG+GGG | + | chr4.3:49342639-49342658 | MS.gene66632:CDS | 35.0% | |
| ACAGATCAATGGTTTCAGAA+TGG | - | chr4.3:49342672-49342691 | None:intergenic | 35.0% | |
| ACATGATACTACATGTTGCA+TGG | + | chr4.3:49344217-49344236 | MS.gene66632:intron | 35.0% | |
| ACCCGTTAATTACATCATAG+TGG | + | chr4.3:49344069-49344088 | MS.gene66632:intron | 35.0% | |
| AGAAGTAGCAGAGATCTTAA+AGG | - | chr4.3:49341842-49341861 | None:intergenic | 35.0% | |
| ATAGAATATAGATGAGGGAG+TGG | + | chr4.3:49345121-49345140 | MS.gene66632:intron | 35.0% | |
| ATCTAGTGGAGTAAGACTTT+CGG | + | chr4.3:49344720-49344739 | MS.gene66632:intron | 35.0% | |
| ATGGAACGTGGATAAGATTA+TGG | + | chr4.3:49344492-49344511 | MS.gene66632:intron | 35.0% | |
| ATTTCCACCATAAAACGTCA+TGG | - | chr4.3:49343544-49343563 | None:intergenic | 35.0% | |
| ATTTCTGTGTACCAATGGTT+AGG | + | chr4.3:49345675-49345694 | MS.gene66632:intron | 35.0% | |
| CTCTGATACATATTGAACAC+GGG | + | chr4.3:49343967-49343986 | MS.gene66632:intron | 35.0% | |
| GAAAAAGTTAGAATGGAACG+TGG | + | chr4.3:49344480-49344499 | MS.gene66632:intron | 35.0% | |
| GAAATGATGGCTTGAAATAG+CGG | + | chr4.3:49343559-49343578 | MS.gene66632:intron | 35.0% | |
| GATGTATATTGAAGAGGTTG+TGG | + | chr4.3:49344109-49344128 | MS.gene66632:intron | 35.0% | |
| GATGTCATACATTGGATTCA+AGG | + | chr4.3:49344274-49344293 | MS.gene66632:intron | 35.0% | |
| GGATCTATTAGGAAGTGATT+GGG | + | chr4.3:49344252-49344271 | MS.gene66632:intron | 35.0% | |
| GGTCCCAAAAAAGATATCAA+AGG | - | chr4.3:49342857-49342876 | None:intergenic | 35.0% | |
| GTAATTGGAGTTTCCTATGT+TGG | + | chr4.3:49342637-49342656 | MS.gene66632:CDS | 35.0% | |
| GTCCATCCACGTTAATTATA+TGG | + | chr4.3:49345704-49345723 | MS.gene66632:intron | 35.0% | |
| GTTGAATCTTAGGCTATGTT+TGG | + | chr4.3:49344969-49344988 | MS.gene66632:intron | 35.0% | |
| GTTGCATGGTTTAAGTATCT+TGG | + | chr4.3:49344231-49344250 | MS.gene66632:intron | 35.0% | |
| TAAATTATCTCCCAGTTGAC+TGG | - | chr4.3:49344578-49344597 | None:intergenic | 35.0% | |
| TAAGAACAATCCTTCAGTGT+AGG | + | chr4.3:49344910-49344929 | MS.gene66632:intron | 35.0% | |
| TACATTGGATTCAAGGAATG+TGG | + | chr4.3:49344281-49344300 | MS.gene66632:intron | 35.0% | |
| TACTTCCTTACACAGATCAA+TGG | - | chr4.3:49342683-49342702 | None:intergenic | 35.0% | |
| TATCATGTGATCCCAAATGA+AGG | - | chr4.3:49344205-49344224 | None:intergenic | 35.0% | |
| TCCTAAATTCCAAAGTGTGA+AGG | - | chr4.3:49344941-49344960 | None:intergenic | 35.0% | |
| TGAAACCATTGATCTGTGTA+AGG | + | chr4.3:49342675-49342694 | MS.gene66632:CDS | 35.0% | |
| TGGATCTATTAGGAAGTGAT+TGG | + | chr4.3:49344251-49344270 | MS.gene66632:intron | 35.0% | |
| TGGGTAATGACAAATGATTG+AGG | - | chr4.3:49344824-49344843 | None:intergenic | 35.0% | |
| TTATCAGCGTTATCAAACAG+CGG | + | chr4.3:49343453-49343472 | MS.gene66632:intron | 35.0% | |
| TTGTCTAACCAATTGCCAAT+GGG | - | chr4.3:49344843-49344862 | None:intergenic | 35.0% | |
| TTTCTGTCTATACTTCATGC+AGG | + | chr4.3:49342589-49342608 | MS.gene66632:intron | 35.0% | |
| TTTCTGTGTACCAATGGTTA+GGG | + | chr4.3:49345676-49345695 | MS.gene66632:intron | 35.0% | |
| TTTGTCTAACCAATTGCCAA+TGG | - | chr4.3:49344844-49344863 | None:intergenic | 35.0% | |
| ! | CTTATTTAGAGTCCATCTAG+TGG | + | chr4.3:49344706-49344725 | MS.gene66632:intron | 35.0% |
| ! | GTTGATAAAGTGGAACTAAC+CGG | - | chr4.3:49342772-49342791 | None:intergenic | 35.0% |
| ! | TTTAAGATCTCTGCTACTTC+TGG | + | chr4.3:49341841-49341860 | MS.gene66632:CDS | 35.0% |
| ! | TTTGAAGCTTGATGCATACA+AGG | + | chr4.3:49345727-49345746 | MS.gene66632:intron | 35.0% |
| ! | TTTTCTGCAAAGAAGCTAGA+AGG | + | chr4.3:49345145-49345164 | MS.gene66632:intron | 35.0% |
| !! | ACCTTCACACTTTGGAATTT+AGG | + | chr4.3:49344937-49344956 | MS.gene66632:intron | 35.0% |
| !! | ACGTTTTATGGTGGAAATGA+TGG | + | chr4.3:49343546-49343565 | MS.gene66632:intron | 35.0% |
| !! | AGAAGTTCAAAACCGGTTTT+TGG | + | chr4.3:49345311-49345330 | MS.gene66632:intron | 35.0% |
| !! | AGTGTCATCTTTAGAGCATA+AGG | - | chr4.3:49345923-49345942 | None:intergenic | 35.0% |
| !! | ATCGAAAGTCATTTTAGCAC+TGG | + | chr4.3:49343297-49343316 | MS.gene66632:intron | 35.0% |
| !!! | CCGGTTTTTGGAATTAAGTT+TGG | + | chr4.3:49345323-49345342 | MS.gene66632:intron | 35.0% |
| AAAACTCTGACCTAAAGTGC+AGG | - | chr4.3:49345575-49345594 | None:intergenic | 40.0% | |
| AAAACTTCAACCCGCAGTTA+GGG | - | chr4.3:49345459-49345478 | None:intergenic | 40.0% | |
| AAACTCTGACCTAAAGTGCA+GGG | - | chr4.3:49345574-49345593 | None:intergenic | 40.0% | |
| ACAGCAAGACGATTGCAATT+AGG | - | chr4.3:49342243-49342262 | None:intergenic | 40.0% | |
| ACCGATGGTGATAGAGATAA+AGG | + | chr4.3:49343625-49343644 | MS.gene66632:intron | 40.0% | |
| ACTCTTTGACTATGAAGCAC+TGG | + | chr4.3:49343862-49343881 | MS.gene66632:intron | 40.0% | |
| AGCTTGAGATGAAAGGAAGA+GGG | - | chr4.3:49341536-49341555 | None:intergenic | 40.0% | |
| AGTAGCAGAGATCTTAAAGG+TGG | - | chr4.3:49341839-49341858 | None:intergenic | 40.0% | |
| AGTTTAAGCGTCTCAACACA+AGG | - | chr4.3:49342880-49342899 | None:intergenic | 40.0% | |
| ATGACACTGAAGGATGACAA+GGG | + | chr4.3:49345935-49345954 | MS.gene66632:CDS | 40.0% | |
| ATTTCCATTAGCAACTGGAC+AGG | - | chr4.3:49342707-49342726 | None:intergenic | 40.0% | |
| CATGCAGGTAAAGCTCTTTA+TGG | + | chr4.3:49342604-49342623 | MS.gene66632:intron | 40.0% | |
| CTTAAGTTACTAGGGTTGAC+AGG | + | chr4.3:49345072-49345091 | MS.gene66632:intron | 40.0% | |
| GAAAGTCTTACTCCACTAGA+TGG | - | chr4.3:49344721-49344740 | None:intergenic | 40.0% | |
| GAGTCAAGCTGTTGAATCTT+AGG | + | chr4.3:49344959-49344978 | MS.gene66632:intron | 40.0% | |
| GAGTGTACATACTAGAGTTG+TGG | + | chr4.3:49345492-49345511 | MS.gene66632:intron | 40.0% | |
| GCCTTTATCTCTATCACCAT+CGG | - | chr4.3:49343629-49343648 | None:intergenic | 40.0% | |
| GTGATTGGGATGTCATACAT+TGG | + | chr4.3:49344266-49344285 | MS.gene66632:intron | 40.0% | |
| GTTTAAGCGTCTCAACACAA+GGG | - | chr4.3:49342879-49342898 | None:intergenic | 40.0% | |
| TAACTTAGACACACGATCAG+TGG | + | chr4.3:49345608-49345627 | MS.gene66632:intron | 40.0% | |
| TAGCTTGAGATGAAAGGAAG+AGG | - | chr4.3:49341537-49341556 | None:intergenic | 40.0% | |
| TAGGCTATACCTTCACACTT+TGG | + | chr4.3:49344929-49344948 | MS.gene66632:intron | 40.0% | |
| TATGGCCAATTTGTGAAGGA+TGG | + | chr4.3:49343513-49343532 | MS.gene66632:intron | 40.0% | |
| TCAATGGTTTCAGAATGGAC+AGG | - | chr4.3:49342667-49342686 | None:intergenic | 40.0% | |
| TCTCTAGTGTAGAACATTGG+TGG | - | chr4.3:49344358-49344377 | None:intergenic | 40.0% | |
| TGAAGGTCAAAACATGTTCC+AGG | - | chr4.3:49345211-49345230 | None:intergenic | 40.0% | |
| TGTATGCTTAGAGAAAGTCC+TGG | + | chr4.3:49345185-49345204 | MS.gene66632:intron | 40.0% | |
| TGTCATTACCCATTGGCAAT+TGG | + | chr4.3:49344832-49344851 | MS.gene66632:intron | 40.0% | |
| TTCGGTCTAACAAGATGACT+AGG | - | chr4.3:49345038-49345057 | None:intergenic | 40.0% | |
| TTTAAGCGTCTCAACACAAG+GGG | - | chr4.3:49342878-49342897 | None:intergenic | 40.0% | |
| TTTGCTGATGTGGGAAATTG+CGG | + | chr4.3:49342207-49342226 | MS.gene66632:intron | 40.0% | |
| ! | GCACAATCTTTTGCTGATGT+GGG | + | chr4.3:49342198-49342217 | MS.gene66632:intron | 40.0% |
| ! | TACTGCTCCATTTCCCTTTT+GGG | + | chr4.3:49342983-49343002 | MS.gene66632:intron | 40.0% |
| ! | TGATGTAATTAACGGGTGCA+AGG | - | chr4.3:49344066-49344085 | None:intergenic | 40.0% |
| !! | GGCTTGAAATAGCGGATTAA+TGG | + | chr4.3:49343567-49343586 | MS.gene66632:intron | 40.0% |
| !! | TGCTCTAAAGATGACACTGA+AGG | + | chr4.3:49345925-49345944 | MS.gene66632:CDS | 40.0% |
| !! | TTAGCTTGTGTACCTGTCTT+TGG | + | chr4.3:49343784-49343803 | MS.gene66632:intron | 40.0% |
| !! | TTATCTTGCTTTAGGGACTG+TGG | + | chr4.3:49345243-49345262 | MS.gene66632:intron | 40.0% |
| !! | TTTGCTGTTTGCAAAAGCTG+TGG | + | chr4.3:49342448-49342467 | MS.gene66632:intron | 40.0% |
| AAACTTCAACCCGCAGTTAG+GGG | - | chr4.3:49345458-49345477 | None:intergenic | 45.0% | |
| AACACTCTTAACAACGCCGA+AGG | + | chr4.3:49342794-49342813 | MS.gene66632:intron | 45.0% | |
| AATGTACACCCCACATGTGT+CGG | + | chr4.3:49343932-49343951 | MS.gene66632:intron | 45.0% | |
| ACACGATCAGTGGTCATTGT+TGG | + | chr4.3:49345618-49345637 | MS.gene66632:intron | 45.0% | |
| ACGTGCAAATGTGTGTCAGA+AGG | + | chr4.3:49343411-49343430 | MS.gene66632:intron | 45.0% | |
| ACTACCTGCAATTACTCCAC+CGG | + | chr4.3:49342750-49342769 | MS.gene66632:CDS | 45.0% | |
| AGAGATCTTAAAGGTGGCAG+GGG | - | chr4.3:49341833-49341852 | None:intergenic | 45.0% | |
| CAAAAGGGAAATGGAGCAGT+AGG | - | chr4.3:49342984-49343003 | None:intergenic | 45.0% | |
| CAAAGAAGCTAGAAGGAGGT+TGG | + | chr4.3:49345152-49345171 | MS.gene66632:intron | 45.0% | |
| CACGATCAGTGGTCATTGTT+GGG | + | chr4.3:49345619-49345638 | MS.gene66632:intron | 45.0% | |
| CACTGCCATCCTTCACAAAT+TGG | - | chr4.3:49343521-49343540 | None:intergenic | 45.0% | |
| CAGAGATCTTAAAGGTGGCA+GGG | - | chr4.3:49341834-49341853 | None:intergenic | 45.0% | |
| CCAAAGAAAGCCAGTCAACT+GGG | + | chr4.3:49344565-49344584 | MS.gene66632:intron | 45.0% | |
| CCAACATACCTACCAAAGAC+AGG | - | chr4.3:49343799-49343818 | None:intergenic | 45.0% | |
| CCTGTCTTTGGTAGGTATGT+TGG | + | chr4.3:49343796-49343815 | MS.gene66632:intron | 45.0% | |
| CTGCTATGGCCAATTTGTGA+AGG | + | chr4.3:49343509-49343528 | MS.gene66632:intron | 45.0% | |
| CTTAGGCTATGTTTGGATGG+AGG | + | chr4.3:49344976-49344995 | MS.gene66632:intron | 45.0% | |
| CTTGTGTACCTGTCTTTGGT+AGG | + | chr4.3:49343788-49343807 | MS.gene66632:intron | 45.0% | |
| GAAAACTTCAACCCGCAGTT+AGG | - | chr4.3:49345460-49345479 | None:intergenic | 45.0% | |
| GAAGGCAGATTATCCTGTGA+AGG | + | chr4.3:49341765-49341784 | MS.gene66632:CDS | 45.0% | |
| GACAAGCCTGCAATAAGTGT+TGG | + | chr4.3:49343989-49344008 | MS.gene66632:intron | 45.0% | |
| GAGTAATTGCAGGTAGTGTC+TGG | - | chr4.3:49342747-49342766 | None:intergenic | 45.0% | |
| GATAAAGTGGAACTAACCGG+TGG | - | chr4.3:49342769-49342788 | None:intergenic | 45.0% | |
| GATGACACTGAAGGATGACA+AGG | + | chr4.3:49345934-49345953 | MS.gene66632:CDS | 45.0% | |
| GATTATCCTGTGAAGGTGAC+TGG | + | chr4.3:49341772-49341791 | MS.gene66632:CDS | 45.0% | |
| GCAGGTAAAGCTCTTTATGG+CGG | + | chr4.3:49342607-49342626 | MS.gene66632:intron | 45.0% | |
| GTAGCACCAACACTTATTGC+AGG | - | chr4.3:49343998-49344017 | None:intergenic | 45.0% | |
| GTATCCTGTCCAGTTGCTAA+TGG | + | chr4.3:49342700-49342719 | MS.gene66632:CDS | 45.0% | |
| GTGAACCTCCAAGGATCAAA+GGG | + | chr4.3:49345534-49345553 | MS.gene66632:intron | 45.0% | |
| TCAATACCAGTCACCTTCAC+AGG | - | chr4.3:49341781-49341800 | None:intergenic | 45.0% | |
| TCCAAAGAAAGCCAGTCAAC+TGG | + | chr4.3:49344564-49344583 | MS.gene66632:intron | 45.0% | |
| TCTGCAAAGAAGCTAGAAGG+AGG | + | chr4.3:49345148-49345167 | MS.gene66632:intron | 45.0% | |
| TGACAGGCGCATTTGTGAAT+TGG | + | chr4.3:49345088-49345107 | MS.gene66632:intron | 45.0% | |
| TGGACATTCTCCCTAACCAT+TGG | - | chr4.3:49345689-49345708 | None:intergenic | 45.0% | |
| TGGGAAATTGCGGTCAAATG+CGG | + | chr4.3:49342217-49342236 | MS.gene66632:intron | 45.0% | |
| TTACCAAACCCTGTTGTCAG+TGG | + | chr4.3:49341805-49341824 | MS.gene66632:CDS | 45.0% | |
| TTCCATTTGTGAATTGCCCC+TGG | + | chr4.3:49342958-49342977 | MS.gene66632:intron | 45.0% | |
| TTGAGATGAAAGGAAGAGGG+TGG | - | chr4.3:49341533-49341552 | None:intergenic | 45.0% | |
| ! | AGTGCCATGACGTTTTATGG+TGG | + | chr4.3:49343537-49343556 | MS.gene66632:intron | 45.0% |
| ! | AGTGGCGTGTTAGTTTGATG+AGG | - | chr4.3:49342541-49342560 | None:intergenic | 45.0% |
| ! | CTACTGCTCCATTTCCCTTT+TGG | + | chr4.3:49342982-49343001 | MS.gene66632:intron | 45.0% |
| ! | GAAGGTATAGCCTACACTGA+AGG | - | chr4.3:49344923-49344942 | None:intergenic | 45.0% |
| ! | GGCACAATCTTTTGCTGATG+TGG | + | chr4.3:49342197-49342216 | MS.gene66632:intron | 45.0% |
| ! | GTTAGGGGTGTGCAAAAATG+TGG | - | chr4.3:49345443-49345462 | None:intergenic | 45.0% |
| ! | TATGGCGGAGATGTGGTAAT+TGG | + | chr4.3:49342622-49342641 | MS.gene66632:CDS | 45.0% |
| ! | TGTAATTAACGGGTGCAAGG+TGG | - | chr4.3:49344063-49344082 | None:intergenic | 45.0% |
| ! | TTTGGATGGAGGCTTTTGCA+GGG | + | chr4.3:49344987-49345006 | MS.gene66632:intron | 45.0% |
| ! | TTTTTGCACACCCCTAACTG+CGG | + | chr4.3:49345445-49345464 | MS.gene66632:intron | 45.0% |
| !! | ACCATCGGTGTTATCGATTG+CGG | - | chr4.3:49343614-49343633 | None:intergenic | 45.0% |
| !! | ATCTCTTGCTTTAGGGACTG+CGG | - | chr4.3:49345287-49345306 | None:intergenic | 45.0% |
| !! | AATTTATTATATTTGTATAA+AGG | - | chr4.3:49343224-49343243 | None:intergenic | 5.0% |
| !!! | TTTTTTTTTTTTTTAAAGTT+TGG | + | chr4.3:49344677-49344696 | MS.gene66632:intron | 5.0% |
| AGAGTAGTGCCCTGCACTTT+AGG | + | chr4.3:49345562-49345581 | MS.gene66632:intron | 50.0% | |
| AGCTAGAAGGAGGTTGGAGA+TGG | + | chr4.3:49345158-49345177 | MS.gene66632:intron | 50.0% | |
| ATGCTTTGCGTGAACCTCCA+AGG | + | chr4.3:49345525-49345544 | MS.gene66632:intron | 50.0% | |
| CAGGCGCATTTGTGAATTGG+TGG | + | chr4.3:49345091-49345110 | MS.gene66632:intron | 50.0% | |
| CGTGAACCTCCAAGGATCAA+AGG | + | chr4.3:49345533-49345552 | MS.gene66632:intron | 50.0% | |
| CTAACCGGTGGAGTAATTGC+AGG | - | chr4.3:49342757-49342776 | None:intergenic | 50.0% | |
| GCAGAGATCTTAAAGGTGGC+AGG | - | chr4.3:49341835-49341854 | None:intergenic | 50.0% | |
| GCCATGACAGATTGCAGTAG+CGG | + | chr4.3:49343475-49343494 | MS.gene66632:intron | 50.0% | |
| GCTGTTTGCAAAAGCTGTGG+AGG | + | chr4.3:49342451-49342470 | MS.gene66632:intron | 50.0% | |
| GTCAAAACATGTTCCAGGCC+AGG | - | chr4.3:49345206-49345225 | None:intergenic | 50.0% | |
| TCCGCTACTGCAATCTGTCA+TGG | - | chr4.3:49343479-49343498 | None:intergenic | 50.0% | |
| TCTGCACACCCTTTGATCCT+TGG | - | chr4.3:49345545-49345564 | None:intergenic | 50.0% | |
| TGAAAGGAAGAGGGTGGAGA+AGG | - | chr4.3:49341527-49341546 | None:intergenic | 50.0% | |
| ! | AGCTCTTTATGGCGGAGATG+TGG | + | chr4.3:49342615-49342634 | MS.gene66632:CDS | 50.0% |
| ! | AGGCAGCTCCCAAAAGCATA+AGG | - | chr4.3:49342521-49342540 | None:intergenic | 50.0% |
| ! | GAGGTTCACGCAAAGCATCA+AGG | - | chr4.3:49345523-49345542 | None:intergenic | 50.0% |
| ! | GGCAGTGCCATGACGTTTTA+TGG | + | chr4.3:49343534-49343553 | MS.gene66632:intron | 50.0% |
| ! | GTTTGGATGGAGGCTTTTGC+AGG | + | chr4.3:49344986-49345005 | MS.gene66632:intron | 50.0% |
| ! | TTGGATGGAGGCTTTTGCAG+GGG | + | chr4.3:49344988-49345007 | MS.gene66632:intron | 50.0% |
| ! | TTTTGCACACCCCTAACTGC+GGG | + | chr4.3:49345446-49345465 | MS.gene66632:intron | 50.0% |
| !! | CCATCGGTGTTATCGATTGC+GGG | - | chr4.3:49343613-49343632 | None:intergenic | 50.0% |
| !! | CCCAGTTGACTGGCTTTCTT+TGG | - | chr4.3:49344568-49344587 | None:intergenic | 50.0% |
| !! | TCTCTTGCTTTAGGGACTGC+GGG | - | chr4.3:49345286-49345305 | None:intergenic | 50.0% |
| ATGGACAGGCACCCCAACAT+AGG | - | chr4.3:49342653-49342672 | None:intergenic | 55.0% | |
| CCCGCAATCGATAACACCGA+TGG | + | chr4.3:49343610-49343629 | MS.gene66632:intron | 55.0% | |
| GAAATGGAGCAGTAGGCCAG+GGG | - | chr4.3:49342977-49342996 | None:intergenic | 55.0% | |
| GCACACCCTTTGATCCTTGG+AGG | - | chr4.3:49345542-49345561 | None:intergenic | 55.0% | |
| GCACCACTGACAACAGGGTT+TGG | - | chr4.3:49341811-49341830 | None:intergenic | 55.0% | |
| GCTTAGAGAAAGTCCTGGCC+TGG | + | chr4.3:49345190-49345209 | MS.gene66632:intron | 55.0% | |
| GGAAATGGAGCAGTAGGCCA+GGG | - | chr4.3:49342978-49342997 | None:intergenic | 55.0% | |
| GGCCAGGGGCAATTCACAAA+TGG | - | chr4.3:49342963-49342982 | None:intergenic | 55.0% | |
| GGGTGGAGAAGGAGAGAAGA+AGG | - | chr4.3:49341516-49341535 | None:intergenic | 55.0% | |
| TGCGGGTAGCAGATCATGAC+AGG | - | chr4.3:49343596-49343615 | None:intergenic | 55.0% | |
| ! | TAACGGGTGCAAGGTGGAGT+GGG | - | chr4.3:49344057-49344076 | None:intergenic | 55.0% |
| ! | TTAACGGGTGCAAGGTGGAG+TGG | - | chr4.3:49344058-49344077 | None:intergenic | 55.0% |
| !! | ACACAGCACCGACACATGTG+GGG | - | chr4.3:49343943-49343962 | None:intergenic | 55.0% |
| !! | CACATGTGTCGGTGCTGTGT+CGG | + | chr4.3:49343943-49343962 | MS.gene66632:intron | 55.0% |
| !! | GACACAGCACCGACACATGT+GGG | - | chr4.3:49343944-49343963 | None:intergenic | 55.0% |
| !! | TGCTTTAGGGACTGCGGGTA+GGG | - | chr4.3:49345281-49345300 | None:intergenic | 55.0% |
| !! | TTGCTTTAGGGACTGCGGGT+AGG | - | chr4.3:49345282-49345301 | None:intergenic | 55.0% |
| AACGGGTGCAAGGTGGAGTG+GGG | - | chr4.3:49344056-49344075 | None:intergenic | 60.0% | |
| ACTGCGGGTAGGGGAGTTCA+TGG | - | chr4.3:49345271-49345290 | None:intergenic | 60.0% | |
| GGGAAATGGAGCAGTAGGCC+AGG | - | chr4.3:49342979-49342998 | None:intergenic | 60.0% | |
| ! | TGGAGGCTTTTGCAGGGGAG+AGG | + | chr4.3:49344993-49345012 | MS.gene66632:intron | 60.0% |
| !! | CAGGGGCACCACTGACAACA+GGG | - | chr4.3:49341816-49341835 | None:intergenic | 60.0% |
| !! | CGACACAGCACCGACACATG+TGG | - | chr4.3:49343945-49343964 | None:intergenic | 60.0% |
| !! | GCTTTAGGGACTGCGGGTAG+GGG | - | chr4.3:49345280-49345299 | None:intergenic | 60.0% |
| !! | GCAGGGGCACCACTGACAAC+AGG | - | chr4.3:49341817-49341836 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.3 | gene | 49341484 | 49346024 | 49341484 | ID=MS.gene66632 |
| chr4.3 | mRNA | 49341484 | 49346024 | 49341484 | ID=MS.gene66632.t1;Parent=MS.gene66632 |
| chr4.3 | exon | 49341484 | 49341577 | 49341484 | ID=MS.gene66632.t1.exon1;Parent=MS.gene66632.t1 |
| chr4.3 | CDS | 49341484 | 49341577 | 49341484 | ID=cds.MS.gene66632.t1;Parent=MS.gene66632.t1 |
| chr4.3 | exon | 49341761 | 49341862 | 49341761 | ID=MS.gene66632.t1.exon2;Parent=MS.gene66632.t1 |
| chr4.3 | CDS | 49341761 | 49341862 | 49341761 | ID=cds.MS.gene66632.t1;Parent=MS.gene66632.t1 |
| chr4.3 | exon | 49342611 | 49342771 | 49342611 | ID=MS.gene66632.t1.exon3;Parent=MS.gene66632.t1 |
| chr4.3 | CDS | 49342611 | 49342771 | 49342611 | ID=cds.MS.gene66632.t1;Parent=MS.gene66632.t1 |
| chr4.3 | exon | 49345917 | 49346024 | 49345917 | ID=MS.gene66632.t1.exon4;Parent=MS.gene66632.t1 |
| chr4.3 | CDS | 49345917 | 49346024 | 49345917 | ID=cds.MS.gene66632.t1;Parent=MS.gene66632.t1 |
| Gene Sequence |
| Protein sequence |
