Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66635.t1 | XP_024638331.1 | 96.4 | 440 | 16 | 0 | 1 | 440 | 1 | 440 | 2.10E-192 | 681.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66635.t1 | Q9SF32 | 37.3 | 177 | 110 | 1 | 94 | 269 | 105 | 281 | 2.6e-21 | 104.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66635.t1 | G7JES7 | 96.1 | 440 | 16 | 1 | 1 | 440 | 1 | 439 | 1.1e-190 | 675.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene050237 | MS.gene66635 | 0.810418 | 1.16E-50 | -1.69E-46 |
MS.gene050807 | MS.gene66635 | 0.808984 | 2.37E-50 | -1.69E-46 |
MS.gene053599 | MS.gene66635 | 0.803489 | 3.40E-49 | -1.69E-46 |
MS.gene055466 | MS.gene66635 | 0.805458 | 1.32E-49 | -1.69E-46 |
MS.gene058625 | MS.gene66635 | 0.806924 | 6.50E-50 | -1.69E-46 |
MS.gene060587 | MS.gene66635 | 0.801879 | 7.31E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66635.t1 | MTR_4g050480 | 96.818 | 440 | 13 | 1 | 1 | 440 | 1 | 439 | 0.0 | 872 |
MS.gene66635.t1 | MTR_4g050480 | 96.591 | 440 | 13 | 2 | 1 | 440 | 1 | 438 | 0.0 | 865 |
MS.gene66635.t1 | MTR_3g104570 | 45.620 | 274 | 135 | 4 | 1 | 266 | 1 | 268 | 7.24e-56 | 191 |
MS.gene66635.t1 | MTR_1g095740 | 51.366 | 183 | 79 | 4 | 94 | 271 | 138 | 315 | 6.03e-51 | 179 |
MS.gene66635.t1 | MTR_6g033415 | 45.968 | 248 | 122 | 5 | 89 | 328 | 99 | 342 | 1.15e-49 | 174 |
MS.gene66635.t1 | MTR_7g100790 | 52.632 | 171 | 80 | 1 | 96 | 265 | 107 | 277 | 3.53e-45 | 163 |
MS.gene66635.t1 | MTR_2g078210 | 44.242 | 165 | 92 | 0 | 99 | 263 | 16 | 180 | 7.20e-45 | 157 |
MS.gene66635.t1 | MTR_2g078210 | 44.242 | 165 | 92 | 0 | 99 | 263 | 76 | 240 | 7.24e-45 | 159 |
MS.gene66635.t1 | MTR_2g015370 | 45.349 | 172 | 92 | 1 | 99 | 270 | 65 | 234 | 5.11e-44 | 156 |
MS.gene66635.t1 | MTR_1g066800 | 49.383 | 162 | 80 | 2 | 96 | 256 | 115 | 275 | 5.57e-44 | 160 |
MS.gene66635.t1 | MTR_1g066800 | 49.383 | 162 | 80 | 2 | 96 | 256 | 120 | 280 | 6.87e-44 | 160 |
MS.gene66635.t1 | MTR_8g024540 | 46.535 | 202 | 87 | 7 | 96 | 280 | 126 | 323 | 6.27e-42 | 156 |
MS.gene66635.t1 | MTR_8g017570 | 39.777 | 269 | 151 | 5 | 1 | 265 | 1 | 262 | 1.26e-36 | 139 |
MS.gene66635.t1 | MTR_4g087420 | 32.670 | 352 | 176 | 15 | 91 | 393 | 140 | 479 | 1.77e-33 | 132 |
MS.gene66635.t1 | MTR_2g099780 | 53.107 | 177 | 73 | 3 | 96 | 262 | 77 | 253 | 6.09e-33 | 129 |
MS.gene66635.t1 | MTR_1g007920 | 47.500 | 200 | 72 | 5 | 96 | 265 | 96 | 292 | 7.31e-33 | 129 |
MS.gene66635.t1 | MTR_1g007920 | 47.500 | 200 | 72 | 5 | 96 | 265 | 121 | 317 | 1.47e-32 | 129 |
MS.gene66635.t1 | MTR_0047s0040 | 33.495 | 206 | 118 | 5 | 96 | 295 | 100 | 292 | 2.34e-26 | 110 |
MS.gene66635.t1 | MTR_3g020990 | 48.062 | 129 | 54 | 3 | 98 | 225 | 96 | 212 | 1.40e-25 | 104 |
MS.gene66635.t1 | MTR_3g091560 | 44.886 | 176 | 78 | 5 | 97 | 259 | 112 | 281 | 4.74e-25 | 107 |
MS.gene66635.t1 | MTR_7g114700 | 35.000 | 180 | 102 | 5 | 80 | 255 | 118 | 286 | 2.28e-24 | 105 |
MS.gene66635.t1 | MTR_1g103070 | 47.788 | 113 | 46 | 2 | 96 | 195 | 135 | 247 | 4.10e-23 | 101 |
MS.gene66635.t1 | MTR_4g108140 | 30.961 | 281 | 130 | 9 | 4 | 261 | 5 | 244 | 6.49e-23 | 101 |
MS.gene66635.t1 | MTR_0019s0070 | 34.884 | 215 | 111 | 4 | 92 | 306 | 112 | 297 | 1.36e-22 | 100 |
MS.gene66635.t1 | MTR_4g108140 | 30.714 | 280 | 131 | 9 | 4 | 261 | 5 | 243 | 2.13e-22 | 100 |
MS.gene66635.t1 | MTR_1g101330 | 40.000 | 160 | 69 | 3 | 96 | 255 | 114 | 246 | 2.37e-22 | 99.4 |
MS.gene66635.t1 | MTR_2g100740 | 34.135 | 208 | 96 | 5 | 1 | 185 | 1 | 190 | 2.71e-22 | 97.8 |
MS.gene66635.t1 | MTR_8g014580 | 63.014 | 73 | 27 | 0 | 96 | 168 | 125 | 197 | 3.73e-22 | 98.2 |
MS.gene66635.t1 | MTR_8g102400 | 66.667 | 66 | 22 | 0 | 96 | 161 | 111 | 176 | 1.70e-20 | 93.6 |
MS.gene66635.t1 | MTR_8g074730 | 59.740 | 77 | 28 | 1 | 87 | 160 | 58 | 134 | 1.39e-19 | 85.1 |
MS.gene66635.t1 | MTR_7g114870 | 54.118 | 85 | 34 | 2 | 84 | 165 | 92 | 174 | 3.06e-19 | 89.4 |
MS.gene66635.t1 | MTR_4g102840 | 39.752 | 161 | 86 | 4 | 1 | 160 | 1 | 151 | 1.24e-18 | 88.2 |
MS.gene66635.t1 | MTR_1g023760 | 33.537 | 164 | 81 | 5 | 97 | 257 | 124 | 262 | 3.26e-17 | 84.7 |
MS.gene66635.t1 | MTR_1g041430 | 48.148 | 108 | 51 | 1 | 96 | 198 | 110 | 217 | 5.67e-17 | 83.2 |
MS.gene66635.t1 | MTR_1g051810 | 35.878 | 131 | 75 | 2 | 99 | 221 | 107 | 236 | 7.13e-14 | 73.2 |
MS.gene66635.t1 | MTR_5g038620 | 49.231 | 65 | 33 | 0 | 99 | 163 | 121 | 185 | 6.97e-13 | 71.2 |
MS.gene66635.t1 | MTR_3g096568 | 35.897 | 117 | 54 | 4 | 158 | 271 | 47 | 145 | 3.69e-11 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene66635.t1 | AT3G22190 | 52.204 | 431 | 175 | 8 | 1 | 423 | 1 | 408 | 1.21e-114 | 343 |
MS.gene66635.t1 | AT3G22190 | 52.204 | 431 | 175 | 8 | 1 | 423 | 1 | 408 | 1.21e-114 | 343 |
MS.gene66635.t1 | AT3G22190 | 52.204 | 431 | 175 | 8 | 1 | 423 | 1 | 408 | 1.21e-114 | 343 |
MS.gene66635.t1 | AT3G22190 | 52.204 | 431 | 175 | 8 | 1 | 423 | 1 | 408 | 1.21e-114 | 343 |
MS.gene66635.t1 | AT2G26180 | 49.455 | 275 | 116 | 5 | 1 | 266 | 1 | 261 | 2.05e-67 | 221 |
MS.gene66635.t1 | AT1G72670 | 39.583 | 288 | 160 | 5 | 1 | 280 | 1 | 282 | 8.31e-54 | 185 |
MS.gene66635.t1 | AT5G03040 | 49.425 | 174 | 77 | 3 | 94 | 261 | 112 | 280 | 4.74e-49 | 174 |
MS.gene66635.t1 | AT5G03040 | 49.425 | 174 | 77 | 3 | 94 | 261 | 112 | 280 | 4.74e-49 | 174 |
MS.gene66635.t1 | AT5G03040 | 49.425 | 174 | 77 | 3 | 94 | 261 | 112 | 280 | 4.74e-49 | 174 |
MS.gene66635.t1 | AT3G52290 | 49.153 | 177 | 85 | 3 | 91 | 265 | 102 | 275 | 2.49e-46 | 166 |
MS.gene66635.t1 | AT3G09710 | 42.932 | 191 | 105 | 2 | 96 | 285 | 107 | 294 | 1.13e-42 | 156 |
MS.gene66635.t1 | AT2G33990 | 41.176 | 170 | 99 | 1 | 95 | 264 | 45 | 213 | 3.47e-41 | 147 |
MS.gene66635.t1 | AT3G15050 | 42.424 | 165 | 95 | 0 | 99 | 263 | 52 | 216 | 5.72e-41 | 147 |
MS.gene66635.t1 | AT3G09710 | 40.976 | 205 | 103 | 5 | 96 | 285 | 107 | 308 | 2.56e-40 | 150 |
MS.gene66635.t1 | AT4G00820 | 40.639 | 219 | 107 | 5 | 64 | 263 | 96 | 310 | 9.27e-40 | 150 |
MS.gene66635.t1 | AT1G17480 | 37.066 | 259 | 136 | 6 | 1 | 252 | 1 | 239 | 2.04e-39 | 145 |
MS.gene66635.t1 | AT3G49260 | 44.565 | 184 | 88 | 3 | 94 | 263 | 117 | 300 | 2.14e-39 | 148 |
MS.gene66635.t1 | AT3G49260 | 44.565 | 184 | 88 | 3 | 94 | 263 | 117 | 300 | 2.14e-39 | 148 |
MS.gene66635.t1 | AT3G49260 | 44.565 | 184 | 88 | 3 | 94 | 263 | 117 | 300 | 2.14e-39 | 148 |
MS.gene66635.t1 | AT3G49260 | 43.005 | 193 | 79 | 4 | 94 | 263 | 117 | 301 | 3.15e-39 | 147 |
MS.gene66635.t1 | AT2G26410 | 42.391 | 184 | 95 | 6 | 91 | 266 | 140 | 320 | 3.17e-36 | 140 |
MS.gene66635.t1 | AT2G26410 | 42.391 | 184 | 95 | 6 | 91 | 266 | 140 | 320 | 3.17e-36 | 140 |
MS.gene66635.t1 | AT1G01110 | 41.530 | 183 | 92 | 3 | 96 | 263 | 120 | 302 | 6.04e-34 | 133 |
MS.gene66635.t1 | AT3G59690 | 42.771 | 166 | 82 | 6 | 91 | 253 | 163 | 318 | 5.45e-32 | 128 |
MS.gene66635.t1 | AT3G59690 | 42.771 | 166 | 82 | 6 | 91 | 253 | 163 | 318 | 5.45e-32 | 128 |
MS.gene66635.t1 | AT4G10640 | 32.219 | 329 | 161 | 8 | 90 | 393 | 93 | 384 | 5.72e-29 | 118 |
MS.gene66635.t1 | AT2G43680 | 37.725 | 167 | 88 | 6 | 91 | 253 | 316 | 470 | 4.47e-26 | 111 |
MS.gene66635.t1 | AT2G43680 | 37.725 | 167 | 88 | 6 | 91 | 253 | 316 | 470 | 4.47e-26 | 111 |
MS.gene66635.t1 | AT2G43680 | 37.725 | 167 | 88 | 6 | 91 | 253 | 316 | 470 | 4.47e-26 | 111 |
MS.gene66635.t1 | AT2G43680 | 37.725 | 167 | 88 | 6 | 91 | 253 | 316 | 470 | 4.47e-26 | 111 |
MS.gene66635.t1 | AT2G43680 | 37.725 | 167 | 88 | 6 | 91 | 253 | 317 | 471 | 5.01e-26 | 111 |
MS.gene66635.t1 | AT5G13460 | 38.037 | 163 | 88 | 4 | 96 | 255 | 110 | 262 | 3.55e-25 | 107 |
MS.gene66635.t1 | AT4G14750 | 68.657 | 67 | 21 | 0 | 96 | 162 | 104 | 170 | 5.45e-23 | 100 |
MS.gene66635.t1 | AT4G14750 | 68.657 | 67 | 21 | 0 | 96 | 162 | 163 | 229 | 1.15e-22 | 100 |
MS.gene66635.t1 | AT4G14750 | 68.657 | 67 | 21 | 0 | 96 | 162 | 163 | 229 | 1.19e-22 | 100 |
MS.gene66635.t1 | AT4G23060 | 64.474 | 76 | 27 | 0 | 95 | 170 | 165 | 240 | 1.97e-21 | 97.1 |
MS.gene66635.t1 | AT3G16490 | 66.154 | 65 | 22 | 0 | 96 | 160 | 106 | 170 | 1.51e-20 | 93.6 |
MS.gene66635.t1 | AT1G51960 | 37.059 | 170 | 98 | 4 | 1 | 164 | 1 | 167 | 1.00e-19 | 90.5 |
MS.gene66635.t1 | AT5G07240 | 71.875 | 64 | 17 | 1 | 95 | 157 | 103 | 166 | 1.00e-19 | 91.3 |
MS.gene66635.t1 | AT1G19870 | 30.769 | 208 | 105 | 3 | 96 | 302 | 214 | 383 | 1.31e-19 | 92.0 |
MS.gene66635.t1 | AT5G07240 | 71.875 | 64 | 17 | 1 | 95 | 157 | 149 | 212 | 1.31e-19 | 91.3 |
MS.gene66635.t1 | AT1G19870 | 30.769 | 208 | 105 | 3 | 96 | 302 | 31 | 200 | 1.32e-19 | 92.0 |
MS.gene66635.t1 | AT1G18840 | 43.243 | 111 | 56 | 2 | 78 | 181 | 86 | 196 | 1.73e-19 | 91.3 |
MS.gene66635.t1 | AT1G18840 | 43.243 | 111 | 56 | 2 | 78 | 181 | 86 | 196 | 1.73e-19 | 91.3 |
MS.gene66635.t1 | AT1G18840 | 43.243 | 111 | 56 | 2 | 78 | 181 | 86 | 196 | 1.73e-19 | 91.3 |
MS.gene66635.t1 | AT3G51380 | 63.235 | 68 | 25 | 0 | 91 | 158 | 31 | 98 | 7.75e-19 | 82.0 |
MS.gene66635.t1 | AT1G14380 | 35.928 | 167 | 96 | 5 | 1 | 163 | 1 | 160 | 1.24e-18 | 89.0 |
MS.gene66635.t1 | AT1G14380 | 35.928 | 167 | 96 | 5 | 1 | 163 | 1 | 160 | 1.24e-18 | 89.0 |
MS.gene66635.t1 | AT1G14380 | 35.928 | 167 | 96 | 5 | 1 | 163 | 1 | 160 | 1.24e-18 | 89.0 |
MS.gene66635.t1 | AT1G14380 | 35.928 | 167 | 96 | 5 | 1 | 163 | 1 | 160 | 1.43e-18 | 88.6 |
MS.gene66635.t1 | AT1G14380 | 35.928 | 167 | 96 | 5 | 1 | 163 | 1 | 160 | 1.43e-18 | 88.6 |
MS.gene66635.t1 | AT1G14380 | 35.928 | 167 | 96 | 5 | 1 | 163 | 1 | 160 | 1.43e-18 | 88.6 |
MS.gene66635.t1 | AT1G14380 | 29.167 | 264 | 153 | 9 | 1 | 260 | 1 | 234 | 1.50e-18 | 88.6 |
MS.gene66635.t1 | AT1G74690 | 58.209 | 67 | 28 | 0 | 97 | 163 | 113 | 179 | 1.34e-17 | 85.5 |
MS.gene66635.t1 | AT5G62070 | 73.214 | 56 | 15 | 0 | 96 | 151 | 116 | 171 | 4.90e-17 | 83.2 |
MS.gene66635.t1 | AT3G49380 | 64.615 | 65 | 23 | 0 | 99 | 163 | 112 | 176 | 5.29e-17 | 82.4 |
MS.gene66635.t1 | AT4G29150 | 63.077 | 65 | 24 | 0 | 96 | 160 | 130 | 194 | 2.60e-16 | 80.9 |
MS.gene66635.t1 | AT5G35670 | 34.921 | 189 | 107 | 6 | 96 | 278 | 159 | 337 | 1.32e-15 | 79.0 |
MS.gene66635.t1 | AT5G03960 | 38.889 | 126 | 74 | 2 | 99 | 221 | 109 | 234 | 9.11e-13 | 70.1 |
MS.gene66635.t1 | AT5G03960 | 38.889 | 126 | 74 | 2 | 99 | 221 | 110 | 235 | 9.23e-13 | 70.1 |
MS.gene66635.t1 | AT5G03960 | 38.889 | 126 | 74 | 2 | 99 | 221 | 110 | 235 | 9.23e-13 | 70.1 |
MS.gene66635.t1 | AT2G02790 | 46.269 | 67 | 36 | 0 | 97 | 163 | 107 | 173 | 5.56e-11 | 65.1 |
MS.gene66635.t1 | AT2G02790 | 46.269 | 67 | 36 | 0 | 97 | 163 | 107 | 173 | 5.56e-11 | 65.1 |
Find 113 sgRNAs with CRISPR-Local
Find 322 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CTCCTGTCTCTTTAATATTT+TGG | 0.074947 | 4.3:+49272689 | None:intergenic |
TGAACATTTGCATTAGATTT+TGG | 0.157733 | 4.3:+49271139 | None:intergenic |
GTTAGATCTGGTAGGATATT+TGG | 0.217923 | 4.3:+49270661 | None:intergenic |
GCTTGTGAGTTTCTCTCCTT+TGG | 0.232536 | 4.3:+49271061 | None:intergenic |
ACAACGCTTGGATGAATATT+TGG | 0.234812 | 4.3:+49271262 | None:intergenic |
AGGCAGCAGGCCGTTTCTTC+AGG | 0.270335 | 4.3:-49271472 | MS.gene66635:CDS |
CACATTTCCATCCTTCTCTA+AGG | 0.275439 | 4.3:+49275071 | None:intergenic |
GAAGCACGCAAAAGCCTATA+AGG | 0.279293 | 4.3:-49270625 | MS.gene66635:CDS |
AACAGCGTTTCGTGGATTTC+TGG | 0.282468 | 4.3:-49273934 | MS.gene66635:intron |
AGCTTAGGTTTATCCCTTAT+AGG | 0.329649 | 4.3:+49270611 | None:intergenic |
GTGAAGTAGAAGGAGAATAA+TGG | 0.340984 | 4.3:+49274024 | None:intergenic |
CATTCTTCGCTCGTGATTTG+AGG | 0.351643 | 4.3:+49273975 | None:intergenic |
AAAGCAGTTGGGGTTGGAAT+TGG | 0.353714 | 4.3:-49271435 | MS.gene66635:CDS |
AATGGGCCTCAAGGTTTGAT+TGG | 0.358827 | 4.3:+49274042 | None:intergenic |
GAGAGTTCAGGCTCGTGTTC+GGG | 0.366984 | 4.3:-49273076 | MS.gene66635:CDS |
GCAAGCTTTGGTGAGAGTTC+AGG | 0.371238 | 4.3:-49273088 | MS.gene66635:CDS |
GTTGGAATTGGTTGGAAAGA+TGG | 0.381054 | 4.3:-49271423 | MS.gene66635:CDS |
GAAGAAACCAACTCAAAATC+TGG | 0.385612 | 4.3:-49271106 | MS.gene66635:CDS |
ATGGGCCTCAAGGTTTGATT+GGG | 0.394844 | 4.3:+49274043 | None:intergenic |
AATGATGGTGCCGCACCTAT+TGG | 0.401735 | 4.3:-49274086 | MS.gene66635:CDS |
TTACTGCATGGCCTCTTACA+AGG | 0.407942 | 4.3:+49273142 | None:intergenic |
CTCAAATCACGAGCGAAGAA+TGG | 0.413351 | 4.3:-49273974 | MS.gene66635:CDS |
TGAGAGTTCAGGCTCGTGTT+CGG | 0.416787 | 4.3:-49273077 | MS.gene66635:CDS |
TCCCCTCCTCCATTGAGCTT+AGG | 0.419990 | 4.3:+49270596 | None:intergenic |
GATGTTATGGATGGTAGAAA+TGG | 0.422170 | 4.3:-49271328 | MS.gene66635:CDS |
TGAACCTGATAAAAGCAGTT+GGG | 0.424024 | 4.3:-49271446 | MS.gene66635:CDS |
GGCATATGCTCTAGCTCATC+AGG | 0.427400 | 4.3:-49272640 | MS.gene66635:intron |
TTTGAGTTGGTTTCTTCAAC+GGG | 0.429692 | 4.3:+49271112 | None:intergenic |
TGAAGTAGAAGGAGAATAAT+GGG | 0.434101 | 4.3:+49274025 | None:intergenic |
TGCATTCAAACAGCGTTTCG+TGG | 0.439864 | 4.3:-49273942 | MS.gene66635:CDS |
GATGGATGGCTGTACGTCCT+TGG | 0.444202 | 4.3:-49271405 | MS.gene66635:CDS |
ATGGATGGCTGTACGTCCTT+GGG | 0.447160 | 4.3:-49271404 | MS.gene66635:CDS |
AAACTCACAAGCAGATAAAC+AGG | 0.449156 | 4.3:-49271050 | MS.gene66635:CDS |
TCTCCGTTGTATGCAAGCTT+TGG | 0.449466 | 4.3:-49273100 | MS.gene66635:CDS |
GGTAGACGAAAATGATGTTA+TGG | 0.450653 | 4.3:-49271341 | MS.gene66635:CDS |
AAGGCGTGTTCGCTTGTCAT+TGG | 0.452023 | 4.3:-49273052 | MS.gene66635:CDS |
TGTCCCTTTCACGTTAGATC+TGG | 0.453777 | 4.3:+49270649 | None:intergenic |
AATGCTCTAATCCACTTGCC+TGG | 0.459539 | 4.3:+49275126 | None:intergenic |
AGCCAAAATATTAAAGAGAC+AGG | 0.460505 | 4.3:-49272691 | MS.gene66635:CDS |
GCATGATCTGCATCTCCAAT+AGG | 0.462104 | 4.3:+49274071 | None:intergenic |
GCAGGCAGGATCAAGGCAGC+AGG | 0.462311 | 4.3:-49271485 | MS.gene66635:CDS |
CAAAGCACGTAGTGCTCTCC+TGG | 0.463354 | 4.3:+49273188 | None:intergenic |
CAATGGAATTCTTTCTCCGA+TGG | 0.469679 | 4.3:+49274144 | None:intergenic |
CTTGACATTAATACGAAGGA+TGG | 0.470311 | 4.3:-49271370 | MS.gene66635:CDS |
TACTGCATGGCCTCTTACAA+GGG | 0.472086 | 4.3:+49273143 | None:intergenic |
CTGATAAAAGCAGTTGGGGT+TGG | 0.473450 | 4.3:-49271441 | MS.gene66635:CDS |
ACCACTTTGCAGTGGCAGGC+AGG | 0.481603 | 4.3:-49271499 | MS.gene66635:intron |
CAAAATGAGTTTGACAATGA+TGG | 0.481901 | 4.3:-49274101 | MS.gene66635:CDS |
TCAAATCACGAGCGAAGAAT+GGG | 0.482710 | 4.3:-49273973 | MS.gene66635:CDS |
TGTACTTGTTGTGAAGTAGA+AGG | 0.484072 | 4.3:+49274014 | None:intergenic |
TTCAGGCTCGTGTTCGGGCA+AGG | 0.490486 | 4.3:-49273071 | MS.gene66635:CDS |
AGCGTTGTCAGTCACAAAAC+CGG | 0.494399 | 4.3:-49271247 | MS.gene66635:CDS |
CTACCAGATCTAACGTGAAA+GGG | 0.494835 | 4.3:-49270652 | MS.gene66635:CDS |
CTTGTTTGGTACAGGAAGGT+TGG | 0.497244 | 4.3:-49272746 | MS.gene66635:intron |
AGGCAAGTGGATTAGAGCAT+TGG | 0.498452 | 4.3:-49275124 | MS.gene66635:CDS |
GAGAACAAACTCACCATGGT+TGG | 0.502802 | 4.3:+49271006 | None:intergenic |
GTGCTTTGAAAGGATTGGTA+AGG | 0.503791 | 4.3:-49273173 | MS.gene66635:CDS |
CAGTTGGGGTTGGAATTGGT+TGG | 0.508731 | 4.3:-49271431 | MS.gene66635:CDS |
TTCTACTTCACAACAAGTAC+AGG | 0.509033 | 4.3:-49274012 | MS.gene66635:CDS |
TTTAGCAGGGGTTGGTTCCG+GGG | 0.509172 | 4.3:-49270693 | MS.gene66635:intron |
AGGCTTCAAGCCCTTGTAAG+AGG | 0.511278 | 4.3:-49273153 | MS.gene66635:CDS |
AGGTTCAAATCCTGAAGAAA+CGG | 0.515201 | 4.3:+49271462 | None:intergenic |
AAACCTAAGCTCAATGGAGG+AGG | 0.518311 | 4.3:-49270599 | MS.gene66635:CDS |
AGGGATAAACCTAAGCTCAA+TGG | 0.520197 | 4.3:-49270605 | MS.gene66635:CDS |
ACTACGTGCTTTGAAAGGAT+TGG | 0.520364 | 4.3:-49273178 | MS.gene66635:CDS |
AAGCACGCAAAAGCCTATAA+GGG | 0.522176 | 4.3:-49270624 | MS.gene66635:CDS |
AGAACAAACTCACCATGGTT+GGG | 0.522573 | 4.3:+49271007 | None:intergenic |
GCCATCAGAAAGTGAAGGGC+CGG | 0.529950 | 4.3:+49271228 | None:intergenic |
GTGTTAGTAGACTTGAACTG+AGG | 0.533731 | 4.3:+49271298 | None:intergenic |
TGCAGTGGCAGGCAGGATCA+AGG | 0.534616 | 4.3:-49271492 | MS.gene66635:intron |
GTGATTTGAGGATTATGTGC+AGG | 0.535421 | 4.3:+49273987 | None:intergenic |
AACGGCGCTATGGGTGTCCC+AGG | 0.540048 | 4.3:-49275144 | None:intergenic |
ACCGGCCCTTCACTTTCTGA+TGG | 0.540369 | 4.3:-49271229 | MS.gene66635:CDS |
CGTGAATCCTTAGAGAAGGA+TGG | 0.540618 | 4.3:-49275078 | MS.gene66635:CDS |
GAACCTGATAAAAGCAGTTG+GGG | 0.546214 | 4.3:-49271445 | MS.gene66635:CDS |
TCTTCCACTAGCAAGTCAGC+AGG | 0.546756 | 4.3:-49271196 | MS.gene66635:CDS |
TTGAACCTGATAAAAGCAGT+TGG | 0.552298 | 4.3:-49271447 | MS.gene66635:CDS |
ATATTTGGCTGTTTGAGCCC+CGG | 0.556821 | 4.3:+49270676 | None:intergenic |
CTATGGGTGTCCCAGGCAAG+TGG | 0.557074 | 4.3:-49275137 | MS.gene66635:CDS |
CCTACCAGATCTAACGTGAA+AGG | 0.557151 | 4.3:-49270653 | MS.gene66635:CDS |
AAGGAGAATAATGGGCCTCA+AGG | 0.560827 | 4.3:+49274033 | None:intergenic |
ATGCTCTAATCCACTTGCCT+GGG | 0.560979 | 4.3:+49275127 | None:intergenic |
AGTTACACAACTGTGGGCGG+TGG | 0.571814 | 4.3:+49270551 | None:intergenic |
AGAGCACTACGTGCTTTGAA+AGG | 0.572874 | 4.3:-49273183 | MS.gene66635:CDS |
ACCTAAGCTCAATGGAGGAG+GGG | 0.573382 | 4.3:-49270597 | MS.gene66635:CDS |
GACGAAAATGATGTTATGGA+TGG | 0.577697 | 4.3:-49271337 | MS.gene66635:CDS |
AATTCCATTGAAATTGAGAA+CGG | 0.579303 | 4.3:-49274131 | MS.gene66635:CDS |
CAAACCTGCTGACTTGCTAG+TGG | 0.597084 | 4.3:+49271192 | None:intergenic |
ATGCATAGTTACACAACTGT+GGG | 0.597446 | 4.3:+49270545 | None:intergenic |
AAAGCGTGAATCCTTAGAGA+AGG | 0.597984 | 4.3:-49275082 | MS.gene66635:CDS |
AACCTAAGCTCAATGGAGGA+GGG | 0.601091 | 4.3:-49270598 | MS.gene66635:CDS |
AGGCTAGCAAGTTTCGCCAT+CGG | 0.603223 | 4.3:-49274160 | MS.gene66635:CDS |
GAATTGGTTGGAAAGATGGA+TGG | 0.603840 | 4.3:-49271419 | MS.gene66635:CDS |
AAGATCTCAAAGTAATCCAA+AGG | 0.605081 | 4.3:-49271077 | MS.gene66635:CDS |
CACAGCCATCAGAAAGTGAA+GGG | 0.617780 | 4.3:+49271224 | None:intergenic |
TCACAGCCATCAGAAAGTGA+AGG | 0.617863 | 4.3:+49271223 | None:intergenic |
TAATACGAAGGATGGAGTGA+AGG | 0.620363 | 4.3:-49271362 | MS.gene66635:CDS |
ATCTGCATCTCCAATAGGTG+CGG | 0.624004 | 4.3:+49274076 | None:intergenic |
AAGTGGATTAGAGCATTGGT+TGG | 0.632093 | 4.3:-49275120 | MS.gene66635:CDS |
CAAAATATTAAAGAGACAGG+AGG | 0.633283 | 4.3:-49272688 | MS.gene66635:CDS |
CCTTTCACGTTAGATCTGGT+AGG | 0.633476 | 4.3:+49270653 | None:intergenic |
TGGGCCTCAAGGTTTGATTG+GGG | 0.636004 | 4.3:+49274044 | None:intergenic |
AGCAAAACGTGAGAGAGCCA+TGG | 0.642186 | 4.3:-49272661 | MS.gene66635:CDS |
TCAAGAAAACGATTCTCCCA+AGG | 0.647063 | 4.3:+49271388 | None:intergenic |
AGATTATCTCTTCCCAACCA+TGG | 0.648989 | 4.3:-49271019 | MS.gene66635:intron |
AATGCATAGTTACACAACTG+TGG | 0.650428 | 4.3:+49270544 | None:intergenic |
TCACCAAAGCTTGCATACAA+CGG | 0.650453 | 4.3:+49273097 | None:intergenic |
GATAAACCTAAGCTCAATGG+AGG | 0.654380 | 4.3:-49270602 | MS.gene66635:CDS |
GGAAGGTTGGTGTGACAGTG+TGG | 0.655505 | 4.3:-49272733 | MS.gene66635:CDS |
CATAGTTACACAACTGTGGG+CGG | 0.663558 | 4.3:+49270548 | None:intergenic |
GAATCCCCAATCAAACCTTG+AGG | 0.665173 | 4.3:-49274048 | MS.gene66635:CDS |
ATGAGCTAGAGCATATGCCA+TGG | 0.669679 | 4.3:+49272644 | None:intergenic |
GAAGGTTGGTGTGACAGTGT+GGG | 0.697609 | 4.3:-49272732 | MS.gene66635:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAAAAAATTAAAAAAAAAAA+AGG | + | chr4.3:49271259-49271278 | None:intergenic | 0.0% |
!! | AAATATATGTTAATAAATAG+TGG | + | chr4.3:49272007-49272026 | None:intergenic | 10.0% |
!! | CAAAATATCTTATAATATTT+GGG | + | chr4.3:49271203-49271222 | None:intergenic | 10.0% |
!! | TAATAAAACAAAATAACTAT+GGG | + | chr4.3:49272745-49272764 | None:intergenic | 10.0% |
!! | TTAATAAAACAAAATAACTA+TGG | + | chr4.3:49272746-49272765 | None:intergenic | 10.0% |
!!! | GTTATTTTGTTTTATTAATA+TGG | - | chr4.3:49272748-49272767 | MS.gene66635:intron | 10.0% |
!!! | TTAGAATTTCATTAATTTTA+GGG | + | chr4.3:49273763-49273782 | None:intergenic | 10.0% |
!!! | TTATTTTCTTTTCTAAATTA+AGG | - | chr4.3:49273348-49273367 | MS.gene66635:intron | 10.0% |
!!! | TTTAGAATTTCATTAATTTT+AGG | + | chr4.3:49273764-49273783 | None:intergenic | 10.0% |
!! | GAAAGATTAATCAAATATAA+TGG | + | chr4.3:49273113-49273132 | None:intergenic | 15.0% |
!! | GCAAAATATCTTATAATATT+TGG | + | chr4.3:49271204-49271223 | None:intergenic | 15.0% |
!!! | AATTGCAAAGAAAATAATTT+TGG | + | chr4.3:49273995-49274014 | None:intergenic | 15.0% |
!! | AAGTAATTATTTACATCTCA+CGG | + | chr4.3:49273217-49273236 | None:intergenic | 20.0% |
!! | AATAAAACATTGCAAAATTG+GGG | + | chr4.3:49273945-49273964 | None:intergenic | 20.0% |
!! | AATATAAACCAAAAATATGC+AGG | + | chr4.3:49270846-49270865 | None:intergenic | 20.0% |
!! | AATCATTTACTACTATGTAA+GGG | - | chr4.3:49273504-49273523 | MS.gene66635:intron | 20.0% |
!! | ACACATTATTCAAAAAGATT+TGG | + | chr4.3:49274932-49274951 | None:intergenic | 20.0% |
!! | AGAATAAAACATTGCAAAAT+TGG | + | chr4.3:49273947-49273966 | None:intergenic | 20.0% |
!! | ATAGTTTAACAATATGAAAG+TGG | + | chr4.3:49271356-49271375 | None:intergenic | 20.0% |
!! | ATTTATTGAGTCATAGAATA+TGG | - | chr4.3:49273445-49273464 | MS.gene66635:intron | 20.0% |
!! | GAATAAAACATTGCAAAATT+GGG | + | chr4.3:49273946-49273965 | None:intergenic | 20.0% |
!! | GGTGATAATATAATACAATA+AGG | + | chr4.3:49274722-49274741 | None:intergenic | 20.0% |
!! | TAATCATTTACTACTATGTA+AGG | - | chr4.3:49273503-49273522 | MS.gene66635:intron | 20.0% |
!! | TCATTCAAATCTGTATATTA+AGG | - | chr4.3:49270916-49270935 | MS.gene66635:intron | 20.0% |
!! | TGAATAATGTGTTAGATTAA+TGG | - | chr4.3:49274940-49274959 | MS.gene66635:intron | 20.0% |
!! | TTACATAGTAGTAAATGATT+AGG | + | chr4.3:49273504-49273523 | None:intergenic | 20.0% |
!! | TTATCTCTTTATACTTGAAT+AGG | - | chr4.3:49271871-49271890 | MS.gene66635:intron | 20.0% |
!! | TTATTCCCTTATATTATCTA+TGG | - | chr4.3:49274105-49274124 | MS.gene66635:CDS | 20.0% |
!! | TTCATGAAATTAATAATCCT+TGG | - | chr4.3:49273788-49273807 | MS.gene66635:intron | 20.0% |
!! | TTTGCAATTATAAGTATGAA+GGG | - | chr4.3:49274006-49274025 | MS.gene66635:CDS | 20.0% |
!!! | AAACATATTTTTCCCATTAA+TGG | + | chr4.3:49272279-49272298 | None:intergenic | 20.0% |
!!! | CAGAATAAGTTTTTAAGTTA+GGG | + | chr4.3:49272409-49272428 | None:intergenic | 20.0% |
!!! | TCAGAATAAGTTTTTAAGTT+AGG | + | chr4.3:49272410-49272429 | None:intergenic | 20.0% |
!!! | TTATTTATCACAACATTTTG+AGG | - | chr4.3:49271800-49271819 | MS.gene66635:intron | 20.0% |
!!! | TTTGGTTACATAATGTTTTA+GGG | - | chr4.3:49273311-49273330 | MS.gene66635:intron | 20.0% |
!!! | TTTTTCCTTATTAACATGAT+AGG | + | chr4.3:49273664-49273683 | None:intergenic | 20.0% |
! | AAAATTATATGCTTTCCGTA+TGG | + | chr4.3:49270803-49270822 | None:intergenic | 25.0% |
! | AAATTATATGCTTTCCGTAT+GGG | + | chr4.3:49270802-49270821 | None:intergenic | 25.0% |
! | AAATTTACGATTCCATCTTA+TGG | - | chr4.3:49273072-49273091 | MS.gene66635:CDS | 25.0% |
! | AAGATCCTATCATGTTAATA+AGG | - | chr4.3:49273656-49273675 | MS.gene66635:intron | 25.0% |
! | AATTCCATTGAAATTGAGAA+CGG | - | chr4.3:49271557-49271576 | MS.gene66635:intron | 25.0% |
! | ATAAACTGTCTGATCAAAAT+TGG | + | chr4.3:49274827-49274846 | None:intergenic | 25.0% |
! | ATCATTTACTACTATGTAAG+GGG | - | chr4.3:49273505-49273524 | MS.gene66635:intron | 25.0% |
! | ATTTGCGAATTTAGTATGAT+CGG | + | chr4.3:49274861-49274880 | None:intergenic | 25.0% |
! | CAAGACAAAAAACTTAGAAA+TGG | + | chr4.3:49274972-49274991 | None:intergenic | 25.0% |
! | CATTTCAAGATAAACAAATC+AGG | + | chr4.3:49272349-49272368 | None:intergenic | 25.0% |
! | CCATCTTATGGAAATTAAAA+GGG | - | chr4.3:49273084-49273103 | MS.gene66635:CDS | 25.0% |
! | CTTTGCAATTATAAGTATGA+AGG | - | chr4.3:49274005-49274024 | MS.gene66635:CDS | 25.0% |
! | GATGATATTTGTGAAGAATA+TGG | - | chr4.3:49273684-49273703 | MS.gene66635:intron | 25.0% |
! | TAAAATATCAGGGACTAAAT+CGG | + | chr4.3:49273725-49273744 | None:intergenic | 25.0% |
! | TAATGAGAACTTAATAAGGA+TGG | + | chr4.3:49271002-49271021 | None:intergenic | 25.0% |
! | TAATTGCTATCTAGTATATG+TGG | - | chr4.3:49273148-49273167 | MS.gene66635:CDS | 25.0% |
! | TCAAGTATAAAGAGATAAAG+AGG | + | chr4.3:49271869-49271888 | None:intergenic | 25.0% |
! | TCCATCTTATGGAAATTAAA+AGG | - | chr4.3:49273083-49273102 | MS.gene66635:CDS | 25.0% |
! | TCTGATACCAACTTAAATTT+GGG | - | chr4.3:49272144-49272163 | MS.gene66635:intron | 25.0% |
! | TGAAATTGCAAATTTCAAAG+AGG | - | chr4.3:49273263-49273282 | MS.gene66635:intron | 25.0% |
! | TGTGTCCATAGATAATATAA+GGG | + | chr4.3:49274113-49274132 | None:intergenic | 25.0% |
! | TTGTGTCCATAGATAATATA+AGG | + | chr4.3:49274114-49274133 | None:intergenic | 25.0% |
! | TTTATATTCCTGAAATACGA+AGG | - | chr4.3:49270858-49270877 | MS.gene66635:intron | 25.0% |
!! | ATGTTTTACCCTTAAAAATC+AGG | - | chr4.3:49272293-49272312 | MS.gene66635:intron | 25.0% |
!! | GCTATAAAATGTTTCTAAAC+AGG | - | chr4.3:49273373-49273392 | MS.gene66635:intron | 25.0% |
!! | GTTTGGTTACATAATGTTTT+AGG | - | chr4.3:49273310-49273329 | MS.gene66635:intron | 25.0% |
!! | TGATATTTTCAATAATCAGC+AGG | - | chr4.3:49271508-49271527 | MS.gene66635:intron | 25.0% |
!! | TTTTCTTGACATTAATACGA+AGG | - | chr4.3:49274314-49274333 | MS.gene66635:intron | 25.0% |
!!! | ATTACTTTTGCTTAGGATTT+GGG | - | chr4.3:49271934-49271953 | MS.gene66635:intron | 25.0% |
!!! | TATTACTTTTGCTTAGGATT+TGG | - | chr4.3:49271933-49271952 | MS.gene66635:intron | 25.0% |
!!! | TCTTTGTATTACTTTTGCTT+AGG | - | chr4.3:49271927-49271946 | MS.gene66635:intron | 25.0% |
!!! | TTACATAATGTTTTAGGGAA+AGG | - | chr4.3:49273316-49273335 | MS.gene66635:intron | 25.0% |
!!! | TTTTGTCTTGTATTTTAGCA+GGG | - | chr4.3:49274982-49275001 | MS.gene66635:intron | 25.0% |
!!! | TTTTTGTCTTGTATTTTAGC+AGG | - | chr4.3:49274981-49275000 | MS.gene66635:intron | 25.0% |
AAATTTCAAAATGATCCCTC+AGG | + | chr4.3:49273860-49273879 | None:intergenic | 30.0% | |
AAGATCTCAAAGTAATCCAA+AGG | - | chr4.3:49274611-49274630 | MS.gene66635:intron | 30.0% | |
AATTGCAAATTTCAAAGAGG+AGG | - | chr4.3:49273266-49273285 | MS.gene66635:intron | 30.0% | |
AATTTCAAAATGATCCCTCA+GGG | + | chr4.3:49273859-49273878 | None:intergenic | 30.0% | |
ACAACAAATCTAACCAAATG+TGG | - | chr4.3:49272458-49272477 | MS.gene66635:intron | 30.0% | |
ACAAGTCATGAATAGTACAA+AGG | + | chr4.3:49270691-49270710 | None:intergenic | 30.0% | |
AGCCAAAATATTAAAGAGAC+AGG | - | chr4.3:49272997-49273016 | MS.gene66635:CDS | 30.0% | |
ATACCAACTTAAATTTGGGT+TGG | - | chr4.3:49272148-49272167 | MS.gene66635:intron | 30.0% | |
CAAAATATTAAAGAGACAGG+AGG | - | chr4.3:49273000-49273019 | MS.gene66635:CDS | 30.0% | |
CAAAATGAGTTTGACAATGA+TGG | - | chr4.3:49271587-49271606 | MS.gene66635:intron | 30.0% | |
CAAATCAGGAAAATAAACCT+TGG | + | chr4.3:49272335-49272354 | None:intergenic | 30.0% | |
CAACAAATCTAACCAAATGT+GGG | - | chr4.3:49272459-49272478 | MS.gene66635:intron | 30.0% | |
CAACTGAAAATATGAACCAA+AGG | + | chr4.3:49274147-49274166 | None:intergenic | 30.0% | |
CCAAAAAAGTTTAACCCATA+CGG | - | chr4.3:49270785-49270804 | MS.gene66635:intron | 30.0% | |
CTCGTAATGAGAACTTAATA+AGG | + | chr4.3:49271006-49271025 | None:intergenic | 30.0% | |
CTCTGATACCAACTTAAATT+TGG | - | chr4.3:49272143-49272162 | MS.gene66635:intron | 30.0% | |
CTTACAAACCAGTTTCATAA+GGG | + | chr4.3:49271973-49271992 | None:intergenic | 30.0% | |
CTTATTAAGTTCTCATTACG+AGG | - | chr4.3:49271004-49271023 | MS.gene66635:intron | 30.0% | |
TAATTATTTACATCTCACGG+TGG | + | chr4.3:49273214-49273233 | None:intergenic | 30.0% | |
TCCTTAACACTTCCATTAAT+GGG | - | chr4.3:49272264-49272283 | MS.gene66635:intron | 30.0% | |
TGAAGTAGAAGGAGAATAAT+GGG | + | chr4.3:49271666-49271685 | None:intergenic | 30.0% | |
TGATTAATTTAGGGACTGTT+TGG | - | chr4.3:49273293-49273312 | MS.gene66635:intron | 30.0% | |
TGTAATTCCATAGACGAAAT+TGG | - | chr4.3:49273912-49273931 | MS.gene66635:intron | 30.0% | |
TTAAAAATCACTGCAAGTGA+AGG | + | chr4.3:49273606-49273625 | None:intergenic | 30.0% | |
! | AAGCATTTGCCTGATTTTTA+AGG | + | chr4.3:49272305-49272324 | None:intergenic | 30.0% |
! | AGCATTTGCCTGATTTTTAA+GGG | + | chr4.3:49272304-49272323 | None:intergenic | 30.0% |
! | AGTTATTGCATTCGTACTTT+TGG | - | chr4.3:49270714-49270733 | MS.gene66635:intron | 30.0% |
! | ATTACAAGCTTTTGGCAATT+TGG | + | chr4.3:49273898-49273917 | None:intergenic | 30.0% |
! | CAGTTAAAGACCTGAAATTT+TGG | - | chr4.3:49270975-49270994 | MS.gene66635:intron | 30.0% |
! | CTCCTGTCTCTTTAATATTT+TGG | + | chr4.3:49273002-49273021 | None:intergenic | 30.0% |
! | TCTATGGAATTACAAGCTTT+TGG | + | chr4.3:49273906-49273925 | None:intergenic | 30.0% |
! | TTTTCCGTTCTCAATTTCAA+TGG | + | chr4.3:49271564-49271583 | None:intergenic | 30.0% |
!! | ATTTGGGTTGAATTGTATTG+TGG | + | chr4.3:49271187-49271206 | None:intergenic | 30.0% |
!! | CATACAAGTCAGTTTTGTAA+GGG | + | chr4.3:49272185-49272204 | None:intergenic | 30.0% |
!! | TATCATTAGTCTTTCTCATC+AGG | - | chr4.3:49273171-49273190 | MS.gene66635:CDS | 30.0% |
!!! | ATAATGTTTTAGGGAAAGGT+TGG | - | chr4.3:49273320-49273339 | MS.gene66635:intron | 30.0% |
!!! | CCCTTTTAATTTCCATAAGA+TGG | + | chr4.3:49273087-49273106 | None:intergenic | 30.0% |
!!! | TAATGTTTTAGGGAAAGGTT+GGG | - | chr4.3:49273321-49273340 | MS.gene66635:intron | 30.0% |
!!! | TATGGGTTAAACTTTTTTGG+CGG | + | chr4.3:49270785-49270804 | None:intergenic | 30.0% |
!!! | TTTGTCTTGTATTTTAGCAG+GGG | - | chr4.3:49274983-49275002 | MS.gene66635:intron | 30.0% |
!!! | TTTTGAGTTGGTTTCTTCAA+CGG | + | chr4.3:49274580-49274599 | None:intergenic | 30.0% |
AAACCAAAAATATGCAGGCA+AGG | + | chr4.3:49270841-49270860 | None:intergenic | 35.0% | |
AAACTCACAAGCAGATAAAC+AGG | - | chr4.3:49274638-49274657 | MS.gene66635:intron | 35.0% | |
AATTAGAGCTCAATAGCATC+TGG | + | chr4.3:49273474-49273493 | None:intergenic | 35.0% | |
AATTGGAGAGTGATTCTTTG+TGG | + | chr4.3:49274810-49274829 | None:intergenic | 35.0% | |
ACAACGCTTGGATGAATATT+TGG | + | chr4.3:49274429-49274448 | None:intergenic | 35.0% | |
ACACAAAATAGACCCACATT+TGG | + | chr4.3:49272474-49272493 | None:intergenic | 35.0% | |
ACACAACACATTGTTTCCTT+TGG | - | chr4.3:49274128-49274147 | MS.gene66635:CDS | 35.0% | |
ACATGACACAAGTGATCAAA+AGG | + | chr4.3:49272862-49272881 | None:intergenic | 35.0% | |
AGAGCCTACACATGATTTAT+TGG | + | chr4.3:49272127-49272146 | None:intergenic | 35.0% | |
AGCTTAGGTTTATCCCTTAT+AGG | + | chr4.3:49275080-49275099 | None:intergenic | 35.0% | |
AGGTTCAAATCCTGAAGAAA+CGG | + | chr4.3:49274229-49274248 | None:intergenic | 35.0% | |
ATAAATCAGTCCTTAGTGCT+TGG | + | chr4.3:49271129-49271148 | None:intergenic | 35.0% | |
ATAAGGGAATAACAACTGAC+AGG | + | chr4.3:49274097-49274116 | None:intergenic | 35.0% | |
ATACAAAAGACCAAGCACTA+AGG | - | chr4.3:49271116-49271135 | MS.gene66635:CDS | 35.0% | |
ATTGACAAGAATTTGCATGC+AGG | + | chr4.3:49273556-49273575 | None:intergenic | 35.0% | |
ATTGGAGAGTGATTCTTTGT+GGG | + | chr4.3:49274809-49274828 | None:intergenic | 35.0% | |
CAAAGGGAATTATATGACCA+AGG | + | chr4.3:49273808-49273827 | None:intergenic | 35.0% | |
CAGCAAATTTACCATTCTGA+AGG | + | chr4.3:49271040-49271059 | None:intergenic | 35.0% | |
CCTTACAAACCAGTTTCATA+AGG | + | chr4.3:49271974-49271993 | None:intergenic | 35.0% | |
CTCCTTAACACTTCCATTAA+TGG | - | chr4.3:49272263-49272282 | MS.gene66635:intron | 35.0% | |
CTGGCTATTCTATAATTGCA+TGG | - | chr4.3:49271442-49271461 | MS.gene66635:CDS | 35.0% | |
CTTCAGAATGGTAAATTTGC+TGG | - | chr4.3:49271038-49271057 | MS.gene66635:CDS | 35.0% | |
CTTGACATTAATACGAAGGA+TGG | - | chr4.3:49274318-49274337 | MS.gene66635:intron | 35.0% | |
GAAGAAACCAACTCAAAATC+TGG | - | chr4.3:49274582-49274601 | MS.gene66635:intron | 35.0% | |
GACGAAAATGATGTTATGGA+TGG | - | chr4.3:49274351-49274370 | MS.gene66635:intron | 35.0% | |
GAGCCTACACATGATTTATT+GGG | + | chr4.3:49272126-49272145 | None:intergenic | 35.0% | |
GATGTTATGGATGGTAGAAA+TGG | - | chr4.3:49274360-49274379 | MS.gene66635:intron | 35.0% | |
GCAAATGCTTATATCTACCA+AGG | - | chr4.3:49272315-49272334 | MS.gene66635:intron | 35.0% | |
GGTAGACGAAAATGATGTTA+TGG | - | chr4.3:49274347-49274366 | MS.gene66635:intron | 35.0% | |
GTGAAGTAGAAGGAGAATAA+TGG | + | chr4.3:49271667-49271686 | None:intergenic | 35.0% | |
GTGTATTTCTCGTACTTGTT+TGG | - | chr4.3:49272928-49272947 | MS.gene66635:intron | 35.0% | |
GTTAACTACCCTTATGAAAC+TGG | - | chr4.3:49271962-49271981 | MS.gene66635:intron | 35.0% | |
GTTAGATCTGGTAGGATATT+TGG | + | chr4.3:49275030-49275049 | None:intergenic | 35.0% | |
GTTCCAACCCAAATTTAAGT+TGG | + | chr4.3:49272154-49272173 | None:intergenic | 35.0% | |
GTTCTACGATCATCTATCAT+TGG | - | chr4.3:49273414-49273433 | MS.gene66635:intron | 35.0% | |
TAAGGATGGACCAAAATTTC+AGG | + | chr4.3:49270988-49271007 | None:intergenic | 35.0% | |
TAAGGGAATAACAACTGACA+GGG | + | chr4.3:49274096-49274115 | None:intergenic | 35.0% | |
TCAACTCTATGTTCTGCTAT+CGG | - | chr4.3:49271075-49271094 | MS.gene66635:CDS | 35.0% | |
TCTTATCTCGCTAACTTACA+AGG | + | chr4.3:49274897-49274916 | None:intergenic | 35.0% | |
TGAACCTGATAAAAGCAGTT+GGG | - | chr4.3:49274242-49274261 | MS.gene66635:intron | 35.0% | |
TTCTACTTCACAACAAGTAC+AGG | - | chr4.3:49271676-49271695 | MS.gene66635:intron | 35.0% | |
TTGAACCTGATAAAAGCAGT+TGG | - | chr4.3:49274241-49274260 | MS.gene66635:intron | 35.0% | |
! | GTGGGTCTATTTTGTGTATT+AGG | - | chr4.3:49272477-49272496 | MS.gene66635:intron | 35.0% |
! | TCTATTTTGTGTATTAGGCC+AGG | - | chr4.3:49272482-49272501 | MS.gene66635:intron | 35.0% |
! | TTTTGCTTAGGATTTGGGTA+GGG | - | chr4.3:49271939-49271958 | MS.gene66635:intron | 35.0% |
!! | ACTTAAATTTGGGTTGGAAC+TGG | - | chr4.3:49272154-49272173 | MS.gene66635:intron | 35.0% |
!! | CCATACAAGTCAGTTTTGTA+AGG | + | chr4.3:49272186-49272205 | None:intergenic | 35.0% |
!! | CCTTACAAAACTGACTTGTA+TGG | - | chr4.3:49272183-49272202 | MS.gene66635:intron | 35.0% |
!! | CCTTATGAAACTGGTTTGTA+AGG | - | chr4.3:49271971-49271990 | MS.gene66635:intron | 35.0% |
!! | TCCCATTAATGGAAGTGTTA+AGG | + | chr4.3:49272268-49272287 | None:intergenic | 35.0% |
!! | TGTACTTGTTGTGAAGTAGA+AGG | + | chr4.3:49271677-49271696 | None:intergenic | 35.0% |
!! | TTGAACTCCAGATTTTGAGT+TGG | + | chr4.3:49274592-49274611 | None:intergenic | 35.0% |
!! | TTTGAGTTGGTTTCTTCAAC+GGG | + | chr4.3:49274579-49274598 | None:intergenic | 35.0% |
!!! | AATGTTTTAGGGAAAGGTTG+GGG | - | chr4.3:49273322-49273341 | MS.gene66635:intron | 35.0% |
!!! | CCGTATGGGTTAAACTTTTT+TGG | + | chr4.3:49270788-49270807 | None:intergenic | 35.0% |
!!! | TTAAACTTTTTTGGCGGCAT+GGG | + | chr4.3:49270779-49270798 | None:intergenic | 35.0% |
AAAGCGTGAATCCTTAGAGA+AGG | - | chr4.3:49270606-49270625 | MS.gene66635:CDS | 40.0% | |
AAGCACGCAAAAGCCTATAA+GGG | - | chr4.3:49275064-49275083 | MS.gene66635:intron | 40.0% | |
ACACACTTCCTTCGTATTTC+AGG | + | chr4.3:49270869-49270888 | None:intergenic | 40.0% | |
ACAGAAAGAGATCGAGAAAG+AGG | + | chr4.3:49270649-49270668 | None:intergenic | 40.0% | |
ACCCGACTGCTAAAATATCA+GGG | + | chr4.3:49273735-49273754 | None:intergenic | 40.0% | |
ACGGTGGAGTATAACAATCA+AGG | + | chr4.3:49273198-49273217 | None:intergenic | 40.0% | |
AGAACAAACTCACCATGGTT+GGG | + | chr4.3:49274684-49274703 | None:intergenic | 40.0% | |
AGATTATCTCTTCCCAACCA+TGG | - | chr4.3:49274669-49274688 | MS.gene66635:intron | 40.0% | |
AGGGATAAACCTAAGCTCAA+TGG | - | chr4.3:49275083-49275102 | MS.gene66635:CDS | 40.0% | |
CAATGGAATTCTTTCTCCGA+TGG | + | chr4.3:49271547-49271566 | None:intergenic | 40.0% | |
CACATTTCCATCCTTCTCTA+AGG | + | chr4.3:49270620-49270639 | None:intergenic | 40.0% | |
CCACTTATAAACCCATTTGC+GGG | - | chr4.3:49272219-49272238 | MS.gene66635:intron | 40.0% | |
CTACCAGATCTAACGTGAAA+GGG | - | chr4.3:49275036-49275055 | MS.gene66635:intron | 40.0% | |
CTACTATCTATCGGACCATT+CGG | + | chr4.3:49272099-49272118 | None:intergenic | 40.0% | |
CTGCTTGACAAACTTCTTTC+TGG | - | chr4.3:49271423-49271442 | MS.gene66635:CDS | 40.0% | |
GAAAGAGAACAAACTCACCA+TGG | + | chr4.3:49274689-49274708 | None:intergenic | 40.0% | |
GAACCTGATAAAAGCAGTTG+GGG | - | chr4.3:49274243-49274262 | MS.gene66635:intron | 40.0% | |
GAATTGGTTGGAAAGATGGA+TGG | - | chr4.3:49274269-49274288 | MS.gene66635:intron | 40.0% | |
GATAAACCTAAGCTCAATGG+AGG | - | chr4.3:49275086-49275105 | MS.gene66635:CDS | 40.0% | |
GCCACTTATAAACCCATTTG+CGG | - | chr4.3:49272218-49272237 | MS.gene66635:intron | 40.0% | |
GCTGTTATCAACCTTCAGAA+TGG | - | chr4.3:49271026-49271045 | MS.gene66635:CDS | 40.0% | |
GTGATTTGAGGATTATGTGC+AGG | + | chr4.3:49271704-49271723 | None:intergenic | 40.0% | |
GTGTTAGTAGACTTGAACTG+AGG | + | chr4.3:49274393-49274412 | None:intergenic | 40.0% | |
GTTGGAATTGGTTGGAAAGA+TGG | - | chr4.3:49274265-49274284 | MS.gene66635:intron | 40.0% | |
TAATACGAAGGATGGAGTGA+AGG | - | chr4.3:49274326-49274345 | MS.gene66635:intron | 40.0% | |
TACCCGACTGCTAAAATATC+AGG | + | chr4.3:49273736-49273755 | None:intergenic | 40.0% | |
TACTATCTATCGGACCATTC+GGG | + | chr4.3:49272098-49272117 | None:intergenic | 40.0% | |
TCAAATCACGAGCGAAGAAT+GGG | - | chr4.3:49271715-49271734 | MS.gene66635:intron | 40.0% | |
TCAAGAAAACGATTCTCCCA+AGG | + | chr4.3:49274303-49274322 | None:intergenic | 40.0% | |
TCACCAAAGCTTGCATACAA+CGG | + | chr4.3:49272594-49272613 | None:intergenic | 40.0% | |
TGGCCCAATAAATCATGTGT+AGG | - | chr4.3:49272120-49272139 | MS.gene66635:intron | 40.0% | |
TTCTCGTACTTGTTTGGTAC+AGG | - | chr4.3:49272934-49272953 | MS.gene66635:intron | 40.0% | |
TTTGCTTAGGATTTGGGTAG+GGG | - | chr4.3:49271940-49271959 | MS.gene66635:intron | 40.0% | |
! | CAAATGGGTTTATAAGTGGC+AGG | + | chr4.3:49272218-49272237 | None:intergenic | 40.0% |
! | CTTTTGCTTAGGATTTGGGT+AGG | - | chr4.3:49271938-49271957 | MS.gene66635:intron | 40.0% |
! | TCACCTTGCCTGCATATTTT+TGG | - | chr4.3:49270835-49270854 | MS.gene66635:intron | 40.0% |
! | TGCTCTAGATGTTTAGTCCT+AGG | + | chr4.3:49272072-49272091 | None:intergenic | 40.0% |
!! | AAGTGGATTAGAGCATTGGT+TGG | - | chr4.3:49270568-49270587 | MS.gene66635:CDS | 40.0% |
!! | ACTACGTGCTTTGAAAGGAT+TGG | - | chr4.3:49272510-49272529 | MS.gene66635:intron | 40.0% |
!! | ACTGGTTTGTAAGGTGATGA+CGG | - | chr4.3:49271980-49271999 | MS.gene66635:intron | 40.0% |
!! | AGGAGGCGCTTGATTAATTT+AGG | - | chr4.3:49273283-49273302 | MS.gene66635:intron | 40.0% |
!! | CAGCTTGTTTTCTTACTGCA+TGG | + | chr4.3:49272561-49272580 | None:intergenic | 40.0% |
!! | GGAGGCGCTTGATTAATTTA+GGG | - | chr4.3:49273284-49273303 | MS.gene66635:intron | 40.0% |
!! | GTGCTTTGAAAGGATTGGTA+AGG | - | chr4.3:49272515-49272534 | MS.gene66635:intron | 40.0% |
!! | TGGTAAATTTGCTGGCTATC+TGG | - | chr4.3:49271046-49271065 | MS.gene66635:CDS | 40.0% |
!! | TTAGGAGTACCACATTGGAT+GGG | + | chr4.3:49272041-49272060 | None:intergenic | 40.0% |
!!! | ATGTTTTAGGGAAAGGTTGG+GGG | - | chr4.3:49273323-49273342 | MS.gene66635:intron | 40.0% |
!!! | GATATTTTAGCAGTCGGGTA+TGG | - | chr4.3:49273736-49273755 | MS.gene66635:intron | 40.0% |
!!! | GTCCCTGATATTTTAGCAGT+CGG | - | chr4.3:49273730-49273749 | MS.gene66635:intron | 40.0% |
!!! | GTGAATGACGAGAGTGTTTT+GGG | - | chr4.3:49271295-49271314 | MS.gene66635:CDS | 40.0% |
!!! | GTTAAACTTTTTTGGCGGCA+TGG | + | chr4.3:49270780-49270799 | None:intergenic | 40.0% |
!!! | TCCCTGATATTTTAGCAGTC+GGG | - | chr4.3:49273731-49273750 | MS.gene66635:intron | 40.0% |
!!! | TCTTGTATTTTAGCAGGGGT+TGG | - | chr4.3:49274987-49275006 | MS.gene66635:intron | 40.0% |
!!! | TGTGAATGACGAGAGTGTTT+TGG | - | chr4.3:49271294-49271313 | MS.gene66635:CDS | 40.0% |
AAACCTAAGCTCAATGGAGG+AGG | - | chr4.3:49275089-49275108 | MS.gene66635:CDS | 45.0% | |
AAAGCAGTTGGGGTTGGAAT+TGG | - | chr4.3:49274253-49274272 | MS.gene66635:intron | 45.0% | |
AACAGCGTTTCGTGGATTTC+TGG | - | chr4.3:49271754-49271773 | MS.gene66635:intron | 45.0% | |
AACCTAAGCTCAATGGAGGA+GGG | - | chr4.3:49275090-49275109 | MS.gene66635:CDS | 45.0% | |
AAGTGTTAAGGAGTCCACCT+TGG | + | chr4.3:49272256-49272275 | None:intergenic | 45.0% | |
AATGCTCTAATCCACTTGCC+TGG | + | chr4.3:49270565-49270584 | None:intergenic | 45.0% | |
AATGGGCCTCAAGGTTTGAT+TGG | + | chr4.3:49271649-49271668 | None:intergenic | 45.0% | |
ACTATGTAAGGGGAAAGTCG+TGG | - | chr4.3:49273515-49273534 | MS.gene66635:intron | 45.0% | |
AGCGTTGTCAGTCACAAAAC+CGG | - | chr4.3:49274441-49274460 | MS.gene66635:intron | 45.0% | |
AGTCCACCTTGGATGAGATA+AGG | + | chr4.3:49272245-49272264 | None:intergenic | 45.0% | |
AGTCGATGAGATTGACGCAA+AGG | + | chr4.3:49273825-49273844 | None:intergenic | 45.0% | |
ATATTTGGCTGTTTGAGCCC+CGG | + | chr4.3:49275015-49275034 | None:intergenic | 45.0% | |
ATCTGCATCTCCAATAGGTG+CGG | + | chr4.3:49271615-49271634 | None:intergenic | 45.0% | |
ATGAGATAAGGCCCGCAAAT+GGG | + | chr4.3:49272233-49272252 | None:intergenic | 45.0% | |
ATGAGCTAGAGCATATGCCA+TGG | + | chr4.3:49273047-49273066 | None:intergenic | 45.0% | |
ATGCTCTAATCCACTTGCCT+GGG | + | chr4.3:49270564-49270583 | None:intergenic | 45.0% | |
ATGGGCCTCAAGGTTTGATT+GGG | + | chr4.3:49271648-49271667 | None:intergenic | 45.0% | |
ATGGTCCGATAGATAGTAGG+TGG | - | chr4.3:49272100-49272119 | MS.gene66635:intron | 45.0% | |
CACAGCCATCAGAAAGTGAA+GGG | + | chr4.3:49274467-49274486 | None:intergenic | 45.0% | |
CATTCTTCGCTCGTGATTTG+AGG | + | chr4.3:49271716-49271735 | None:intergenic | 45.0% | |
CCTACCAGATCTAACGTGAA+AGG | - | chr4.3:49275035-49275054 | MS.gene66635:intron | 45.0% | |
CCTTTCACGTTAGATCTGGT+AGG | + | chr4.3:49275038-49275057 | None:intergenic | 45.0% | |
CGAATGGTCCGATAGATAGT+AGG | - | chr4.3:49272097-49272116 | MS.gene66635:intron | 45.0% | |
CGTACTTGTTTGGTACAGGA+AGG | - | chr4.3:49272938-49272957 | MS.gene66635:intron | 45.0% | |
CGTGAATCCTTAGAGAAGGA+TGG | - | chr4.3:49270610-49270629 | MS.gene66635:CDS | 45.0% | |
CTATGTAAGGGGAAAGTCGT+GGG | - | chr4.3:49273516-49273535 | MS.gene66635:intron | 45.0% | |
CTCAAATCACGAGCGAAGAA+TGG | - | chr4.3:49271714-49271733 | MS.gene66635:intron | 45.0% | |
CTGATAAAAGCAGTTGGGGT+TGG | - | chr4.3:49274247-49274266 | MS.gene66635:intron | 45.0% | |
CTTGTTTGGTACAGGAAGGT+TGG | - | chr4.3:49272942-49272961 | MS.gene66635:intron | 45.0% | |
GAAGCACGCAAAAGCCTATA+AGG | - | chr4.3:49275063-49275082 | MS.gene66635:intron | 45.0% | |
GAATCCCCAATCAAACCTTG+AGG | - | chr4.3:49271640-49271659 | MS.gene66635:intron | 45.0% | |
GAGAACAAACTCACCATGGT+TGG | + | chr4.3:49274685-49274704 | None:intergenic | 45.0% | |
GCATGATCTGCATCTCCAAT+AGG | + | chr4.3:49271620-49271639 | None:intergenic | 45.0% | |
GCTTGTGAGTTTCTCTCCTT+TGG | + | chr4.3:49274630-49274649 | None:intergenic | 45.0% | |
GTACCACATTGGATGGGATA+AGG | + | chr4.3:49272035-49272054 | None:intergenic | 45.0% | |
GTCGATGAGATTGACGCAAA+GGG | + | chr4.3:49273824-49273843 | None:intergenic | 45.0% | |
TACTGCATGGCCTCTTACAA+GGG | + | chr4.3:49272548-49272567 | None:intergenic | 45.0% | |
TATGTAAGGGGAAAGTCGTG+GGG | - | chr4.3:49273517-49273536 | MS.gene66635:intron | 45.0% | |
TCACAGCCATCAGAAAGTGA+AGG | + | chr4.3:49274468-49274487 | None:intergenic | 45.0% | |
TCCTCTTTACCACTTTGCAG+TGG | - | chr4.3:49274181-49274200 | MS.gene66635:intron | 45.0% | |
TCGATCGCCAATTTCGTCTA+TGG | + | chr4.3:49273922-49273941 | None:intergenic | 45.0% | |
TCTCCGTTGTATGCAAGCTT+TGG | - | chr4.3:49272588-49272607 | MS.gene66635:intron | 45.0% | |
TGCATTCAAACAGCGTTTCG+TGG | - | chr4.3:49271746-49271765 | MS.gene66635:intron | 45.0% | |
TGTCCCTTTCACGTTAGATC+TGG | + | chr4.3:49275042-49275061 | None:intergenic | 45.0% | |
TTACTGCATGGCCTCTTACA+AGG | + | chr4.3:49272549-49272568 | None:intergenic | 45.0% | |
TTGGGCCACCTACTATCTAT+CGG | + | chr4.3:49272108-49272127 | None:intergenic | 45.0% | |
! | AGAGCACTACGTGCTTTGAA+AGG | - | chr4.3:49272505-49272524 | MS.gene66635:intron | 45.0% |
! | CCCGCAAATGGGTTTATAAG+TGG | + | chr4.3:49272222-49272241 | None:intergenic | 45.0% |
! | GTTTTGTGACTGACAACGCT+TGG | + | chr4.3:49274441-49274460 | None:intergenic | 45.0% |
!! | AAGGAGAATAATGGGCCTCA+AGG | + | chr4.3:49271658-49271677 | None:intergenic | 45.0% |
!! | ACTAAGTTGATCGACCCTGA+GGG | - | chr4.3:49273842-49273861 | MS.gene66635:intron | 45.0% |
!! | AGGCAAGTGGATTAGAGCAT+TGG | - | chr4.3:49270564-49270583 | MS.gene66635:CDS | 45.0% |
!! | CAACCCCAACTGCTTTTATC+AGG | + | chr4.3:49274249-49274268 | None:intergenic | 45.0% |
!! | GTGTGTTAGGAGTACCACAT+TGG | + | chr4.3:49272046-49272065 | None:intergenic | 45.0% |
!! | GTTAGGAGTACCACATTGGA+TGG | + | chr4.3:49272042-49272061 | None:intergenic | 45.0% |
!!! | ATTTTAGCAGGGGTTGGTTC+CGG | - | chr4.3:49274993-49275012 | MS.gene66635:intron | 45.0% |
!!! | TGTTTTAGGGAAAGGTTGGG+GGG | - | chr4.3:49273324-49273343 | MS.gene66635:intron | 45.0% |
!!! | ATTTATTAACATATATTTTT+AGG | - | chr4.3:49272009-49272028 | MS.gene66635:intron | 5.0% |
AAGGCGTGTTCGCTTGTCAT+TGG | - | chr4.3:49272636-49272655 | MS.gene66635:intron | 50.0% | |
AAGTCGTGGGGCAACTGTAT+TGG | - | chr4.3:49273529-49273548 | MS.gene66635:intron | 50.0% | |
ACCTAAGCTCAATGGAGGAG+GGG | - | chr4.3:49275091-49275110 | MS.gene66635:CDS | 50.0% | |
AGCAAAACGTGAGAGAGCCA+TGG | - | chr4.3:49273027-49273046 | MS.gene66635:CDS | 50.0% | |
AGGCTAGCAAGTTTCGCCAT+CGG | - | chr4.3:49271528-49271547 | MS.gene66635:intron | 50.0% | |
AGGCTTCAAGCCCTTGTAAG+AGG | - | chr4.3:49272535-49272554 | MS.gene66635:intron | 50.0% | |
ATGGATGGCTGTACGTCCTT+GGG | - | chr4.3:49274284-49274303 | MS.gene66635:intron | 50.0% | |
CAGTTGGGGTTGGAATTGGT+TGG | - | chr4.3:49274257-49274276 | MS.gene66635:intron | 50.0% | |
CTTTACCACTTTGCAGTGGC+AGG | - | chr4.3:49274185-49274204 | MS.gene66635:intron | 50.0% | |
GATGAGATAAGGCCCGCAAA+TGG | + | chr4.3:49272234-49272253 | None:intergenic | 50.0% | |
GATGATGTTAGCACTCGCAG+AGG | + | chr4.3:49274743-49274762 | None:intergenic | 50.0% | |
GCCACTGCAAAGTGGTAAAG+AGG | + | chr4.3:49274185-49274204 | None:intergenic | 50.0% | |
TACTCCTAACACACACGCCT+AGG | - | chr4.3:49272052-49272071 | MS.gene66635:intron | 50.0% | |
TAGTCCTAGGCGTGTGTGTT+AGG | + | chr4.3:49272059-49272078 | None:intergenic | 50.0% | |
TCTTCCACTAGCAAGTCAGC+AGG | - | chr4.3:49274492-49274511 | MS.gene66635:intron | 50.0% | |
TGAGAGTTCAGGCTCGTGTT+CGG | - | chr4.3:49272611-49272630 | MS.gene66635:intron | 50.0% | |
TGGGCCTCAAGGTTTGATTG+GGG | + | chr4.3:49271647-49271666 | None:intergenic | 50.0% | |
! | AGGCCTTATCCCATCCAATG+TGG | - | chr4.3:49272029-49272048 | MS.gene66635:intron | 50.0% |
! | CATCTAGAGCATGACCCGAA+TGG | - | chr4.3:49272081-49272100 | MS.gene66635:intron | 50.0% |
! | GCAAGCTTTGGTGAGAGTTC+AGG | - | chr4.3:49272600-49272619 | MS.gene66635:intron | 50.0% |
! | GGCATATGCTCTAGCTCATC+AGG | - | chr4.3:49273048-49273067 | MS.gene66635:CDS | 50.0% |
!! | AATGATGGTGCCGCACCTAT+TGG | - | chr4.3:49271602-49271621 | MS.gene66635:intron | 50.0% |
!! | CAAACCTGCTGACTTGCTAG+TGG | + | chr4.3:49274499-49274518 | None:intergenic | 50.0% |
!! | GAAGGTTGGTGTGACAGTGT+GGG | - | chr4.3:49272956-49272975 | MS.gene66635:intron | 50.0% |
!! | GACTAAGTTGATCGACCCTG+AGG | - | chr4.3:49273841-49273860 | MS.gene66635:intron | 50.0% |
!!! | AACTTTTTTGGCGGCATGGG+AGG | + | chr4.3:49270776-49270795 | None:intergenic | 50.0% |
!!! | TTTTAGCAGGGGTTGGTTCC+GGG | - | chr4.3:49274994-49275013 | MS.gene66635:intron | 50.0% |
ACCGGCCCTTCACTTTCTGA+TGG | - | chr4.3:49274459-49274478 | MS.gene66635:intron | 55.0% | |
CAAAGCACGTAGTGCTCTCC+TGG | + | chr4.3:49272503-49272522 | None:intergenic | 55.0% | |
GAGAGTTCAGGCTCGTGTTC+GGG | - | chr4.3:49272612-49272631 | MS.gene66635:intron | 55.0% | |
GATGGATGGCTGTACGTCCT+TGG | - | chr4.3:49274283-49274302 | MS.gene66635:intron | 55.0% | |
GCCATCAGAAAGTGAAGGGC+CGG | + | chr4.3:49274463-49274482 | None:intergenic | 55.0% | |
TCCCCTCCTCCATTGAGCTT+AGG | + | chr4.3:49275095-49275114 | None:intergenic | 55.0% | |
! | GGGCCTTATCTCATCCAAGG+TGG | - | chr4.3:49272239-49272258 | MS.gene66635:intron | 55.0% |
! | TGCGGGCCTTATCTCATCCA+AGG | - | chr4.3:49272236-49272255 | MS.gene66635:intron | 55.0% |
!! | GGAAGGTTGGTGTGACAGTG+TGG | - | chr4.3:49272955-49272974 | MS.gene66635:intron | 55.0% |
!! | TTTAGCAGGGGTTGGTTCCG+GGG | - | chr4.3:49274995-49275014 | MS.gene66635:intron | 55.0% |
ACCACTTTGCAGTGGCAGGC+AGG | - | chr4.3:49274189-49274208 | MS.gene66635:intron | 60.0% | |
AGGCAGCAGGCCGTTTCTTC+AGG | - | chr4.3:49274216-49274235 | MS.gene66635:intron | 60.0% | |
TCCTGCCTGCCACTGCAAAG+TGG | + | chr4.3:49274193-49274212 | None:intergenic | 60.0% | |
TGCAGTGGCAGGCAGGATCA+AGG | - | chr4.3:49274196-49274215 | MS.gene66635:intron | 60.0% | |
TTCAGGCTCGTGTTCGGGCA+AGG | - | chr4.3:49272617-49272636 | MS.gene66635:intron | 60.0% | |
GCAGGCAGGATCAAGGCAGC+AGG | - | chr4.3:49274203-49274222 | MS.gene66635:intron | 65.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr4.3 | gene | 49270553 | 49275157 | 49270553 | ID=MS.gene66635 |
chr4.3 | mRNA | 49270553 | 49275157 | 49270553 | ID=MS.gene66635.t1;Parent=MS.gene66635 |
chr4.3 | exon | 49275074 | 49275157 | 49275074 | ID=MS.gene66635.t1.exon1;Parent=MS.gene66635.t1 |
chr4.3 | CDS | 49275074 | 49275157 | 49275074 | ID=cds.MS.gene66635.t1;Parent=MS.gene66635.t1 |
chr4.3 | exon | 49273935 | 49274183 | 49273935 | ID=MS.gene66635.t1.exon2;Parent=MS.gene66635.t1 |
chr4.3 | CDS | 49273935 | 49274183 | 49273935 | ID=cds.MS.gene66635.t1;Parent=MS.gene66635.t1 |
chr4.3 | exon | 49272984 | 49273211 | 49272984 | ID=MS.gene66635.t1.exon3;Parent=MS.gene66635.t1 |
chr4.3 | CDS | 49272984 | 49273211 | 49272984 | ID=cds.MS.gene66635.t1;Parent=MS.gene66635.t1 |
chr4.3 | exon | 49272641 | 49272754 | 49272641 | ID=MS.gene66635.t1.exon4;Parent=MS.gene66635.t1 |
chr4.3 | CDS | 49272641 | 49272754 | 49272641 | ID=cds.MS.gene66635.t1;Parent=MS.gene66635.t1 |
chr4.3 | exon | 49271020 | 49271509 | 49271020 | ID=MS.gene66635.t1.exon5;Parent=MS.gene66635.t1 |
chr4.3 | CDS | 49271020 | 49271509 | 49271020 | ID=cds.MS.gene66635.t1;Parent=MS.gene66635.t1 |
chr4.3 | exon | 49270553 | 49270710 | 49270553 | ID=MS.gene66635.t1.exon6;Parent=MS.gene66635.t1 |
chr4.3 | CDS | 49270553 | 49270710 | 49270553 | ID=cds.MS.gene66635.t1;Parent=MS.gene66635.t1 |
Gene Sequence |
Protein sequence |