AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene058625


Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058625.t1 MTR_3g006860 97.267 439 12 0 1 439 92 530 0.0 885
MS.gene058625.t1 MTR_6g463380 90.205 439 43 0 1 439 96 534 0.0 827
MS.gene058625.t1 MTR_6g463380 88.858 359 40 0 1 359 96 454 0.0 670
MS.gene058625.t1 MTR_6g463380 89.076 357 39 0 1 357 96 452 0.0 667
MS.gene058625.t1 MTR_6g079410 49.011 455 140 12 39 431 40 464 1.46e-128 380
MS.gene058625.t1 MTR_6g061650 53.495 329 104 8 109 433 32 315 6.50e-104 311
MS.gene058625.t1 MTR_6g006850 36.957 322 153 8 122 436 29 307 1.19e-55 187
MS.gene058625.t1 MTR_1g014390 46.701 197 75 3 237 430 119 288 3.52e-49 169
MS.gene058625.t1 MTR_6g006710 34.967 306 118 7 137 436 63 293 2.76e-45 159
MS.gene058625.t1 MTR_1g029560 41.667 204 94 5 239 436 18 202 1.09e-41 147
MS.gene058625.t1 MTR_1g012010 43.939 132 69 2 230 359 112 240 1.01e-25 105
MS.gene058625.t1 MTR_7g025575 60.227 88 28 2 358 439 13 99 3.65e-25 99.8
MS.gene058625.t1 MTR_1g012015 60.000 75 27 1 359 430 23 97 1.17e-24 98.2
MS.gene058625.t1 MTR_6g080120 68.000 50 14 1 358 407 1 48 1.54e-13 65.9
MS.gene058625.t1 MTR_6g079950 41.791 67 38 1 370 436 1 66 5.47e-12 61.2
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene058625.t1 AT5G51740 60.000 400 151 6 44 439 48 442 3.79e-175 498
MS.gene058625.t1 AT5G51740 60.000 400 151 6 44 439 91 485 1.05e-174 498
MS.gene058625.t1 AT5G51740 55.975 318 133 4 43 357 90 403 2.54e-128 377

Find 101 sgRNAs with CRISPR-Local

Find 290 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGAAAATAATAAGAATATT+AGG 0.145873 3.1:+2586209 MS.gene058625:CDS
ATGAGATTCTTGATGATAAA+TGG 0.146030 3.1:+2586896 MS.gene058625:CDS
TGGATTGAATTGGGAGATTT+TGG 0.167567 3.1:+2586981 MS.gene058625:CDS
TCTCAAGGTTGTAACTTTAA+TGG 0.172006 3.1:+2586238 MS.gene058625:CDS
TTTCTAAGATATTAGATAAA+AGG 0.183661 3.1:+2586281 MS.gene058625:CDS
ATCCTCACTCTTACACTTTC+AGG 0.212835 3.1:-2586700 None:intergenic
TTTGAGATTAATAGGAATAT+TGG 0.278853 3.1:+2586307 MS.gene058625:CDS
GGATTCTGAAACCAATTCTT+TGG 0.281604 3.1:-2586481 None:intergenic
GCAGAGATAGCAACTATTAT+TGG 0.282923 3.1:+2587093 MS.gene058625:CDS
CTCAAGGTTGTAACTTTAAT+GGG 0.283856 3.1:+2586239 MS.gene058625:CDS
GGTTCAGAAGAGTAGGAAAA+AGG 0.286020 3.1:+2586918 MS.gene058625:CDS
CCATCCAAATGTGACGTATT+AGG 0.286467 3.1:-2586961 None:intergenic
ATCTTCTTCTCCATCTCTTT+CGG 0.290022 3.1:-2586613 None:intergenic
CACATTTGGATGGATTGAAT+TGG 0.299543 3.1:+2586971 MS.gene058625:CDS
AAATGTGTTCTCTTCGTATA+AGG 0.304300 3.1:-2586580 None:intergenic
CCCAACTTCTCGTAGACTTT+AGG 0.315746 3.1:-2590294 None:intergenic
GTAAAGGTGTTAGCTTTAAT+AGG 0.316218 3.1:+2586338 MS.gene058625:CDS
TGGGAAGATAGTTGTGTTTA+CGG 0.319349 3.1:+2587044 MS.gene058625:CDS
AACCAATTCTTTGGCCCTCT+TGG 0.319495 3.1:-2586472 None:intergenic
TGGTGTTGAAGGATTTCTTT+AGG 0.322830 3.1:+2590452 MS.gene058625:CDS
TTGAGATTAATAGGAATATT+GGG 0.334774 3.1:+2586308 MS.gene058625:CDS
ACACTTTCAGGGTGCATTGC+AGG 0.341748 3.1:-2586688 None:intergenic
TGAAAATAATAAGAATATTA+GGG 0.346615 3.1:+2586210 MS.gene058625:CDS
ATTTCAAGAGATTAGACAAC+AGG 0.356427 3.1:+2586380 MS.gene058625:CDS
ATTGGTATAGTGGTTGGTTC+TGG 0.359308 3.1:+2586517 MS.gene058625:CDS
TACTGTGTTTGGTGAAGAAA+AGG 0.364696 3.1:+2586807 MS.gene058625:CDS
AGCCAAGAGGGCCAAAGAAT+TGG 0.368828 3.1:+2586470 MS.gene058625:CDS
AAGAAAACGAGCAGAATTAC+TGG 0.372401 3.1:+2590371 MS.gene058625:CDS
AAGAGATGGAGAAGAAGATT+GGG 0.386070 3.1:+2586617 MS.gene058625:CDS
CATCCCCTCAGCACTGTGTC+TGG 0.390785 3.1:-2587485 None:intergenic
GAGGGAAAGTTGAAGGGAAT+TGG 0.391132 3.1:+2586863 MS.gene058625:CDS
TTCTAAGATATTAGATAAAA+GGG 0.399166 3.1:+2586282 MS.gene058625:CDS
CTATGTCATCACTTCTCTTA+CGG 0.399194 3.1:+2587578 MS.gene058625:CDS
GCTTCAGAAAATACTGTGTT+TGG 0.401820 3.1:+2586796 MS.gene058625:CDS
GGGAAGATAGTTGTGTTTAC+GGG 0.403532 3.1:+2587045 MS.gene058625:CDS
GACATAGTGTTGACAATATC+AGG 0.403878 3.1:-2587562 None:intergenic
TTTGAAGAGAGGGTTGAGTA+AGG 0.405119 3.1:+2586747 MS.gene058625:CDS
ACATTTGGATGGATTGAATT+GGG 0.413686 3.1:+2586972 MS.gene058625:CDS
GAGTTTGAGAAGATGAAGGC+AGG 0.420112 3.1:+2586646 MS.gene058625:CDS
AAAGAGATGGAGAAGAAGAT+TGG 0.422292 3.1:+2586616 MS.gene058625:CDS
AGAGAAGGACATGGTGTTGA+AGG 0.427494 3.1:+2590441 MS.gene058625:CDS
AGAATTGGTTTCAGAATCCT+AGG 0.434255 3.1:+2586485 MS.gene058625:CDS
GCAACCTAATACGTCACATT+TGG 0.438474 3.1:+2586957 MS.gene058625:CDS
TGAGATTCTTGATGATAAAT+GGG 0.439908 3.1:+2586897 MS.gene058625:CDS
ATTAATAGGAATATTGGGTT+GGG 0.442056 3.1:+2586313 MS.gene058625:CDS
AATATTGGGTTGGGTTGTAA+AGG 0.450561 3.1:+2586322 MS.gene058625:CDS
GCATGTTATGATTGGTATAG+TGG 0.453566 3.1:+2586507 MS.gene058625:CDS
ACCTAAAGTCTACGAGAAGT+TGG 0.465177 3.1:+2590293 MS.gene058625:CDS
TTGTTGAAGCTTTGAAGAGA+GGG 0.466119 3.1:+2586737 MS.gene058625:CDS
AATCCTAGGCATGTTATGAT+TGG 0.472024 3.1:+2586499 MS.gene058625:CDS
ACTGTGTTTGGTGAAGAAAA+GGG 0.472337 3.1:+2586808 MS.gene058625:CDS
ATCTAAAAGCTTAGAATCGC+CGG 0.472748 3.1:-2590325 None:intergenic
TATATTGCGACTCATCCATC+TGG 0.475671 3.1:+2590348 MS.gene058625:CDS
AGAATTACTGGCTCAAGCTC+AGG 0.477979 3.1:+2590383 MS.gene058625:CDS
TCCTCACTCTTACACTTTCA+GGG 0.494164 3.1:-2586699 None:intergenic
GAAAGTGGAGGGAAAGTTGA+AGG 0.499097 3.1:+2586856 MS.gene058625:CDS
GATTAATAGGAATATTGGGT+TGG 0.500434 3.1:+2586312 MS.gene058625:CDS
AATATTAGGGTTGGTTCTCA+AGG 0.503963 3.1:+2586223 MS.gene058625:CDS
CCTAATACGTCACATTTGGA+TGG 0.504235 3.1:+2586961 MS.gene058625:CDS
AATGATTACCTTCTGGAGAA+AGG 0.507195 3.1:-2587604 None:intergenic
ATTAGTGCATTGACTGAAAG+TGG 0.507872 3.1:+2586841 MS.gene058625:CDS
GTTATGATTGGTATAGTGGT+TGG 0.507924 3.1:+2586511 MS.gene058625:CDS
CTTCTATTAGTTGCATCCGC+TGG 0.508982 3.1:+2590252 MS.gene058625:CDS
CCTAAAGTCTACGAGAAGTT+GGG 0.509175 3.1:+2590294 MS.gene058625:CDS
AATAATAAGAATATTAGGGT+TGG 0.510133 3.1:+2586214 MS.gene058625:CDS
AGGGGATGACAAAGAATATG+TGG 0.517207 3.1:+2587500 MS.gene058625:CDS
TTTGGTGGTGAATGATCCTA+TGG 0.519554 3.1:+2586999 MS.gene058625:CDS
TACGGCTTCCTTTCTCCAGA+AGG 0.521905 3.1:+2587596 MS.gene058625:CDS
GAGAGAGTTTGAGAAGATGA+AGG 0.524062 3.1:+2586642 MS.gene058625:CDS
ATAAATGGGTTCAGAAGAGT+AGG 0.531439 3.1:+2586911 MS.gene058625:CDS
CTTCCCACCAGGTAAGCAAA+AGG 0.542507 3.1:-2587028 None:intergenic
ATTGTTGAAGCTTTGAAGAG+AGG 0.546244 3.1:+2586736 MS.gene058625:CDS
AAGTTGAAGGGAATTGGCAT+CGG 0.548246 3.1:+2586869 MS.gene058625:CDS
AGTTGAAGGGAATTGGCATC+GGG 0.552278 3.1:+2586870 MS.gene058625:CDS
AAGCAAAAGGCATTAACCAT+AGG 0.561244 3.1:-2587015 None:intergenic
AGAGATGGAGAAGAAGATTG+GGG 0.562312 3.1:+2586618 MS.gene058625:CDS
ATACCAATCATAACATGCCT+AGG 0.568681 3.1:-2586502 None:intergenic
GAAATTGAAGCTGATTACAT+TGG 0.569179 3.1:+2590228 MS.gene058625:CDS
GTGGCCAGACACAGTGCTGA+GGG 0.570445 3.1:+2587481 MS.gene058625:CDS
GGTTGAGTAAGGAGAATGTG+TGG 0.571308 3.1:+2586758 MS.gene058625:CDS
CTGTGTTTGGTGAAGAAAAG+GGG 0.574536 3.1:+2586809 MS.gene058625:CDS
ACTGGCTCAAGCTCAGGTGA+TGG 0.577941 3.1:+2590389 MS.gene058625:CDS
AGCAACTATTATTGGACATG+AGG 0.602186 3.1:+2587101 MS.gene058625:CDS
AAAGTGGAGGGAAAGTTGAA+GGG 0.608573 3.1:+2586857 MS.gene058625:CDS
AACACAACTATCTTCCCACC+AGG 0.619918 3.1:-2587039 None:intergenic
GTGCATTGACTGAAAGTGGA+GGG 0.623353 3.1:+2586845 MS.gene058625:CDS
CGCTGGCTATGATCCACGTG+TGG 0.635218 3.1:+2590269 MS.gene058625:CDS
ATATATAAGAATGTAAGAGA+AGG 0.642352 3.1:+2590426 MS.gene058625:CDS
TTTCAAGAGATTAGACAACA+GGG 0.648905 3.1:+2586381 MS.gene058625:CDS
GGGGATGACAAAGAATATGT+GGG 0.650366 3.1:+2587501 MS.gene058625:CDS
GTTTGGTGAAGAAAAGGGGA+AGG 0.654958 3.1:+2586813 MS.gene058625:CDS
TGTGGCCAGACACAGTGCTG+AGG 0.662397 3.1:+2587480 MS.gene058625:CDS
TAATTAGGTTGGACATGCTG+TGG 0.665392 3.1:+2587462 MS.gene058625:intron
TTCAAGAGATTAGACAACAG+GGG 0.668530 3.1:+2586382 MS.gene058625:CDS
ATGTGGATCCTCAAAATGTG+CGG 0.671867 3.1:+2586440 MS.gene058625:CDS
AGTGCATTGACTGAAAGTGG+AGG 0.673147 3.1:+2586844 MS.gene058625:CDS
TAGACTTTAGGTGCCACACG+TGG 0.678929 3.1:-2590282 None:intergenic
AAGAATGTAAGAGAAGGACA+TGG 0.701425 3.1:+2590432 MS.gene058625:CDS
CACACGTGGATCATAGCCAG+CGG 0.708062 3.1:-2590268 None:intergenic
TGGCCAGACACAGTGCTGAG+GGG 0.712731 3.1:+2587482 MS.gene058625:CDS
ACCCTGAAAGTGTAAGAGTG+AGG 0.750161 3.1:+2586698 MS.gene058625:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!!! TTTTATTTTTTATTTTTTTA+TGG - chr3.1:2589284-2589303 None:intergenic 0.0%
!! TGAAAATAATAAGAATATTA+GGG + chr3.1:2586210-2586229 MS.gene058625:CDS 10.0%
!!! AAAATGTACAAATTTAAAAT+TGG - chr3.1:2589824-2589843 None:intergenic 10.0%
!!! AATTTTGATTTATCATATAT+TGG + chr3.1:2589336-2589355 MS.gene058625:intron 10.0%
!! GTGAAAATAATAAGAATATT+AGG + chr3.1:2586209-2586228 MS.gene058625:CDS 15.0%
!!! ATAAATTTTACTTGAATTAG+TGG + chr3.1:2587788-2587807 MS.gene058625:intron 15.0%
!!! ATAACAATGATAACTTTTTA+AGG - chr3.1:2589421-2589440 None:intergenic 15.0%
!!! TTCTAAGATATTAGATAAAA+GGG + chr3.1:2586282-2586301 MS.gene058625:CDS 15.0%
!!! TTTCTAAGATATTAGATAAA+AGG + chr3.1:2586281-2586300 MS.gene058625:CDS 15.0%
!!! TTTTTATAACTGTGTATTTT+GGG + chr3.1:2586542-2586561 MS.gene058625:CDS 15.0%
!! AAATGAGTCTACTATTATTA+AGG - chr3.1:2587672-2587691 None:intergenic 20.0%
!! AAATTCCAATTCATATTTAG+AGG - chr3.1:2589321-2589340 None:intergenic 20.0%
!! AAGTGAAAAACATGAAATTA+GGG + chr3.1:2587756-2587775 MS.gene058625:intron 20.0%
!! AATAATAAGAATATTAGGGT+TGG + chr3.1:2586214-2586233 MS.gene058625:CDS 20.0%
!! AATGGAATATGAAAATTTGA+TGG - chr3.1:2590011-2590030 None:intergenic 20.0%
!! ATATATAAGAATGTAAGAGA+AGG + chr3.1:2590426-2590445 MS.gene058625:CDS 20.0%
!! GAACAATACAAAAATTCAAT+TGG - chr3.1:2587650-2587669 None:intergenic 20.0%
!! GAAGATTAAAATGAAAACTT+AGG - chr3.1:2589944-2589963 None:intergenic 20.0%
!! TTATTGTATAAATGAAGAGT+TGG - chr3.1:2589259-2589278 None:intergenic 20.0%
!! TTGAGATTAATAGGAATATT+GGG + chr3.1:2586308-2586327 MS.gene058625:CDS 20.0%
!!! AAAAAAAAAAGGTCACATTT+TGG + chr3.1:2588155-2588174 MS.gene058625:intron 20.0%
!!! ACATTAGTTTTGTTTATACT+TGG - chr3.1:2590119-2590138 None:intergenic 20.0%
!!! ATATATTTTCTCTTAAAGTG+TGG - chr3.1:2588346-2588365 None:intergenic 20.0%
!!! ATTTTAACTATACACAAATG+TGG + chr3.1:2590140-2590159 MS.gene058625:intron 20.0%
!!! ATTTTGGCCTTTTATTATTT+TGG + chr3.1:2588171-2588190 MS.gene058625:intron 20.0%
!!! CATTAGTTTTGTTTATACTT+GGG - chr3.1:2590118-2590137 None:intergenic 20.0%
!!! GACCTTTTTTTTTTTTCTTT+TGG - chr3.1:2588149-2588168 None:intergenic 20.0%
!!! GTTTTTATAACTGTGTATTT+TGG + chr3.1:2586541-2586560 MS.gene058625:CDS 20.0%
!!! TAAGATGCTATTGATTAAAA+TGG + chr3.1:2588429-2588448 MS.gene058625:intron 20.0%
!!! TTGAAGTTAATACGAATTTT+AGG + chr3.1:2586407-2586426 MS.gene058625:CDS 20.0%
!!! TTTGAGATTAATAGGAATAT+TGG + chr3.1:2586307-2586326 MS.gene058625:CDS 20.0%
!!! TTTGATTCGTTTAACTTATT+AGG + chr3.1:2587130-2587149 MS.gene058625:intron 20.0%
! AAATTTCTGTCAAGTACTAA+GGG - chr3.1:2589223-2589242 None:intergenic 25.0%
! AATACAATTGAAAGTAGTAC+AGG - chr3.1:2589797-2589816 None:intergenic 25.0%
! AATAGAAGAATTCATTGTGA+AGG - chr3.1:2587908-2587927 None:intergenic 25.0%
! AATTGGTTATAAAGAGACAA+CGG - chr3.1:2587633-2587652 None:intergenic 25.0%
! AGACTGTTAAAGAGATATTA+TGG + chr3.1:2587202-2587221 MS.gene058625:intron 25.0%
! ATACAATTGAAAGTAGTACA+GGG - chr3.1:2589796-2589815 None:intergenic 25.0%
! ATTAATAGGAATATTGGGTT+GGG + chr3.1:2586313-2586332 MS.gene058625:CDS 25.0%
! ATTATGTGATCTTTCATAAG+GGG + chr3.1:2588500-2588519 MS.gene058625:intron 25.0%
! ATTTACAAAAAAAAACTCGC+AGG - chr3.1:2589046-2589065 None:intergenic 25.0%
! CATTATGTGATCTTTCATAA+GGG + chr3.1:2588499-2588518 MS.gene058625:intron 25.0%
! CCAAAGTAATTTATTTGCAT+AGG + chr3.1:2589696-2589715 MS.gene058625:intron 25.0%
! CCTATGCAAATAAATTACTT+TGG - chr3.1:2589699-2589718 None:intergenic 25.0%
! CGCCAAAAGAAAAAAAAAAA+AGG + chr3.1:2588144-2588163 MS.gene058625:intron 25.0%
! GAAGTGAAAAACATGAAATT+AGG + chr3.1:2587755-2587774 MS.gene058625:intron 25.0%
! TAAATGTTCTTGGAGTTATT+AGG + chr3.1:2589725-2589744 MS.gene058625:intron 25.0%
! TAAATTTCTGTCAAGTACTA+AGG - chr3.1:2589224-2589243 None:intergenic 25.0%
! TCAAAATCGTAAATTGTTGT+GGG + chr3.1:2588750-2588769 MS.gene058625:intron 25.0%
! TCATTATGTGATCTTTCATA+AGG + chr3.1:2588498-2588517 MS.gene058625:intron 25.0%
! TGAATAACAAGAAACAACTT+CGG - chr3.1:2588917-2588936 None:intergenic 25.0%
! TGATAAAAGTAGCTATAAGT+AGG + chr3.1:2588267-2588286 MS.gene058625:intron 25.0%
!! AAATTTTTCCACAATTTTCC+AGG + chr3.1:2590202-2590221 MS.gene058625:intron 25.0%
!! ATGAGATTCTTGATGATAAA+TGG + chr3.1:2586896-2586915 MS.gene058625:CDS 25.0%
!! CATTTACATTTGTTTCTTGT+TGG + chr3.1:2589905-2589924 MS.gene058625:intron 25.0%
!! TGAGATTCTTGATGATAAAT+GGG + chr3.1:2586897-2586916 MS.gene058625:CDS 25.0%
!! TTTAACTTATTAGGCTTGTT+TGG + chr3.1:2587139-2587158 MS.gene058625:intron 25.0%
!! TTTTGCAGTTTAACATGTTT+AGG + chr3.1:2587409-2587428 MS.gene058625:intron 25.0%
!!! AATGATAACTTTTTAAGGAG+AGG - chr3.1:2589416-2589435 None:intergenic 25.0%
!!! ATGATAACTTTTTAAGGAGA+GGG - chr3.1:2589415-2589434 None:intergenic 25.0%
!!! TACTTATAGCTACTTTTATC+AGG - chr3.1:2588268-2588287 None:intergenic 25.0%
!!! TTAAGCTATTTTTGCAAACA+AGG + chr3.1:2587379-2587398 MS.gene058625:intron 25.0%
!!! TTTTAGGAGATTATACTATG+TGG + chr3.1:2586423-2586442 MS.gene058625:CDS 25.0%
AAAAAAAAACTCGCAGGTAT+GGG - chr3.1:2589040-2589059 None:intergenic 30.0%
AAATGTGTTCTCTTCGTATA+AGG - chr3.1:2586583-2586602 None:intergenic 30.0%
ACCAACCTCTAAATATGAAT+TGG + chr3.1:2589313-2589332 MS.gene058625:intron 30.0%
AGGAAGTAACTTCAATTTGT+AGG + chr3.1:2589007-2589026 MS.gene058625:intron 30.0%
ATTTCAAGAGATTAGACAAC+AGG + chr3.1:2586380-2586399 MS.gene058625:CDS 30.0%
ATTTGAATGTAGTATGAGCA+TGG + chr3.1:2587965-2587984 MS.gene058625:intron 30.0%
CAACACAAAAACTGTACATA+TGG - chr3.1:2589184-2589203 None:intergenic 30.0%
CTCAAGGTTGTAACTTTAAT+GGG + chr3.1:2586239-2586258 MS.gene058625:CDS 30.0%
CTTAAGCGCTTATATGATAT+AGG + chr3.1:2587336-2587355 MS.gene058625:intron 30.0%
CTTATTTCAGTAGAAAAGCT+TGG - chr3.1:2588822-2588841 None:intergenic 30.0%
GAAATTGAAGCTGATTACAT+TGG + chr3.1:2590228-2590247 MS.gene058625:CDS 30.0%
GACTCATTTCATTGATACAT+AGG + chr3.1:2587683-2587702 MS.gene058625:intron 30.0%
GATAGATGAACCTTCAAAAT+AGG + chr3.1:2588987-2589006 MS.gene058625:intron 30.0%
GATTAATAGGAATATTGGGT+TGG + chr3.1:2586312-2586331 MS.gene058625:CDS 30.0%
GCATGGAATTAATGCAAATA+TGG - chr3.1:2589533-2589552 None:intergenic 30.0%
GCTACATGACTAAACATATA+GGG - chr3.1:2587871-2587890 None:intergenic 30.0%
GCTTTCAAAGTTGAATTGTA+CGG + chr3.1:2588380-2588399 MS.gene058625:intron 30.0%
GTCAAAATCGTAAATTGTTG+TGG + chr3.1:2588749-2588768 MS.gene058625:intron 30.0%
TAGGAATGCTTAAATGTTCT+TGG + chr3.1:2589715-2589734 MS.gene058625:intron 30.0%
TCCAATTCATATTTAGAGGT+TGG - chr3.1:2589317-2589336 None:intergenic 30.0%
TCTATAATATCCTAGAGAGT+AGG - chr3.1:2589751-2589770 None:intergenic 30.0%
TCTCAAGGTTGTAACTTTAA+TGG + chr3.1:2586238-2586257 MS.gene058625:CDS 30.0%
TGAAATTGGTAGAATCACAA+TGG + chr3.1:2588404-2588423 MS.gene058625:intron 30.0%
TGCTACATGACTAAACATAT+AGG - chr3.1:2587872-2587891 None:intergenic 30.0%
TTAATTCCATGCTTAGTAGA+AGG + chr3.1:2589541-2589560 MS.gene058625:intron 30.0%
TTGAATTGTACGGTTGAAAT+TGG + chr3.1:2588390-2588409 MS.gene058625:intron 30.0%
TTTCAAGAGATTAGACAACA+GGG + chr3.1:2586381-2586400 MS.gene058625:CDS 30.0%
TTTGTTAGACAGGTTAGAAT+AGG + chr3.1:2587711-2587730 MS.gene058625:intron 30.0%
! ATAGGTAATGTTTGTTAGAC+AGG + chr3.1:2587701-2587720 MS.gene058625:intron 30.0%
! CATATGTACAGTTTTTGTGT+TGG + chr3.1:2589182-2589201 MS.gene058625:intron 30.0%
! TATGGATGTAATTTGTGAGT+AGG - chr3.1:2589515-2589534 None:intergenic 30.0%
! TGTTGGTTAGATAGTCAAAA+TGG - chr3.1:2590029-2590048 None:intergenic 30.0%
! TTGTGTTTGATTTCGTCTTA+TGG - chr3.1:2587935-2587954 None:intergenic 30.0%
! TTTCTCTTAAAGTGTGGTTT+TGG - chr3.1:2588340-2588359 None:intergenic 30.0%
!! AACTGTGTATTTTGGGAATA+TGG + chr3.1:2586549-2586568 MS.gene058625:CDS 30.0%
!! ACATTTGGATGGATTGAATT+GGG + chr3.1:2586972-2586991 MS.gene058625:CDS 30.0%
!! GAAGTTACTTCCTATTTTGA+AGG - chr3.1:2589000-2589019 None:intergenic 30.0%
!! GTAAAGGTGTTAGCTTTAAT+AGG + chr3.1:2586338-2586357 MS.gene058625:CDS 30.0%
!! TATGAAGTGTTGCCAAATAT+CGG + chr3.1:2589068-2589087 MS.gene058625:intron 30.0%
!!! AAAGGGCTTTTGAGATTAAT+AGG + chr3.1:2586299-2586318 MS.gene058625:CDS 30.0%
!!! TCATGTAGCAATGTTGTTTT+AGG + chr3.1:2587882-2587901 MS.gene058625:intron 30.0%
AAACTCAAACGCAAACTAGA+CGG + chr3.1:2588612-2588631 MS.gene058625:intron 35.0%
AAAGAGATGGAGAAGAAGAT+TGG + chr3.1:2586616-2586635 MS.gene058625:CDS 35.0%
AAGAAAACGAGCAGAATTAC+TGG + chr3.1:2590371-2590390 MS.gene058625:CDS 35.0%
AAGAATGTAAGAGAAGGACA+TGG + chr3.1:2590432-2590451 MS.gene058625:CDS 35.0%
AAGAGATGGAGAAGAAGATT+GGG + chr3.1:2586617-2586636 MS.gene058625:CDS 35.0%
AATCCTAGGCATGTTATGAT+TGG + chr3.1:2586499-2586518 MS.gene058625:CDS 35.0%
ACTTGAATTAGTGGAACTAG+AGG + chr3.1:2587797-2587816 MS.gene058625:intron 35.0%
AGAAAGCCAAAATATTGCCA+TGG - chr3.1:2589094-2589113 None:intergenic 35.0%
AGCAACTATTATTGGACATG+AGG + chr3.1:2587101-2587120 MS.gene058625:CDS 35.0%
AGCGTGGCCAAAATAATAAA+AGG - chr3.1:2588181-2588200 None:intergenic 35.0%
ATACCAATCATAACATGCCT+AGG - chr3.1:2586505-2586524 None:intergenic 35.0%
ATCTAAAAGCTTAGAATCGC+CGG - chr3.1:2590328-2590347 None:intergenic 35.0%
ATCTTCTTCTCCATCTCTTT+CGG - chr3.1:2586616-2586635 None:intergenic 35.0%
ATTTCCATCCTGGAAAATTG+TGG - chr3.1:2590213-2590232 None:intergenic 35.0%
CAAAAAAAAACTCGCAGGTA+TGG - chr3.1:2589041-2589060 None:intergenic 35.0%
CATGTGACTCAGCTTAAAAA+GGG - chr3.1:2588963-2588982 None:intergenic 35.0%
CTATGTCATCACTTCTCTTA+CGG + chr3.1:2587578-2587597 MS.gene058625:CDS 35.0%
GAAGACTGATCGATAAAACA+GGG + chr3.1:2588472-2588491 MS.gene058625:intron 35.0%
GACTATAGTGAGTCTGATTT+CGG + chr3.1:2589846-2589865 MS.gene058625:intron 35.0%
GAGAAGTTGGGAAAAATATC+CGG + chr3.1:2590306-2590325 MS.gene058625:CDS 35.0%
GCAGAGATAGCAACTATTAT+TGG + chr3.1:2587093-2587112 MS.gene058625:CDS 35.0%
GCATGTTATGATTGGTATAG+TGG + chr3.1:2586507-2586526 MS.gene058625:CDS 35.0%
GCTTCAGAAAATACTGTGTT+TGG + chr3.1:2586796-2586815 MS.gene058625:CDS 35.0%
GTTATGATTGGTATAGTGGT+TGG + chr3.1:2586511-2586530 MS.gene058625:CDS 35.0%
GTTCAGAAGAGTAGGAAAAA+GGG + chr3.1:2586919-2586938 MS.gene058625:CDS 35.0%
TACACAAATGTGGTGAATGA+TGG + chr3.1:2590150-2590169 MS.gene058625:intron 35.0%
TGAAGACTGATCGATAAAAC+AGG + chr3.1:2588471-2588490 MS.gene058625:intron 35.0%
TGGGAAGATAGTTGTGTTTA+CGG + chr3.1:2587044-2587063 MS.gene058625:CDS 35.0%
TTCAAGAGATTAGACAACAG+GGG + chr3.1:2586382-2586401 MS.gene058625:CDS 35.0%
! AATGATTACCTTCTGGAGAA+AGG - chr3.1:2587607-2587626 None:intergenic 35.0%
! ACTGTGTTTGGTGAAGAAAA+GGG + chr3.1:2586808-2586827 MS.gene058625:CDS 35.0%
! AGAATTGGTTTCAGAATCCT+AGG + chr3.1:2586485-2586504 MS.gene058625:CDS 35.0%
! ATAAATGGGTTCAGAAGAGT+AGG + chr3.1:2586911-2586930 MS.gene058625:CDS 35.0%
! ATTGAATTGGGAGATTTTGG+TGG + chr3.1:2586984-2587003 MS.gene058625:CDS 35.0%
! ATTTGTTTCTTGTTGGACTG+TGG + chr3.1:2589912-2589931 MS.gene058625:intron 35.0%
! TACTGTGTTTGGTGAAGAAA+AGG + chr3.1:2586807-2586826 MS.gene058625:CDS 35.0%
! TCATATTTAGAGGTTGGTCA+TGG - chr3.1:2589311-2589330 None:intergenic 35.0%
! TGGATTGAATTGGGAGATTT+TGG + chr3.1:2586981-2587000 MS.gene058625:CDS 35.0%
! TTAAAATGCCGCACATTTTG+AGG - chr3.1:2586451-2586470 None:intergenic 35.0%
! TTTTCCACAATTTTCCAGGA+TGG + chr3.1:2590206-2590225 MS.gene058625:intron 35.0%
!! AAGATGAAGGCAGGTTTTAA+GGG + chr3.1:2586655-2586674 MS.gene058625:CDS 35.0%
!! AAGCAAAAGGCATTAACCAT+AGG - chr3.1:2587018-2587037 None:intergenic 35.0%
!! AATATTAGGGTTGGTTCTCA+AGG + chr3.1:2586223-2586242 MS.gene058625:CDS 35.0%
!! AATATTGGGTTGGGTTGTAA+AGG + chr3.1:2586322-2586341 MS.gene058625:CDS 35.0%
!! AGAGTCAGTGTAATGGATTA+AGG - chr3.1:2589132-2589151 None:intergenic 35.0%
!! ATTAGTGCATTGACTGAAAG+TGG + chr3.1:2586841-2586860 MS.gene058625:CDS 35.0%
!! ATTGTTGAAGCTTTGAAGAG+AGG + chr3.1:2586736-2586755 MS.gene058625:CDS 35.0%
!! CACATTTGGATGGATTGAAT+TGG + chr3.1:2586971-2586990 MS.gene058625:CDS 35.0%
!! CTTTTTAAGCTGAGTCACAT+GGG + chr3.1:2588962-2588981 MS.gene058625:intron 35.0%
!! GACATAGTGTTGACAATATC+AGG - chr3.1:2587565-2587584 None:intergenic 35.0%
!! GGATTCTGAAACCAATTCTT+TGG - chr3.1:2586484-2586503 None:intergenic 35.0%
!! TTGTTGAAGCTTTGAAGAGA+GGG + chr3.1:2586737-2586756 MS.gene058625:CDS 35.0%
!!! AATATTTTGGCTTTCTGCCA+TGG + chr3.1:2589098-2589117 MS.gene058625:intron 35.0%
!!! GATTTTGATTCCGAAAGAGA+TGG + chr3.1:2586603-2586622 MS.gene058625:CDS 35.0%
!!! TGTGCTTCATTTTAACTTCG+TGG + chr3.1:2589977-2589996 MS.gene058625:intron 35.0%
AAAGTGGAGGGAAAGTTGAA+GGG + chr3.1:2586857-2586876 MS.gene058625:CDS 40.0%
AAGTCTAACACTTTGCTGCT+TGG + chr3.1:2587439-2587458 MS.gene058625:intron 40.0%
AAGTTGAAGGGAATTGGCAT+CGG + chr3.1:2586869-2586888 MS.gene058625:CDS 40.0%
ACATGCTTGGTTATGCCATT+TGG - chr3.1:2589386-2589405 None:intergenic 40.0%
ACCTAAAGTCTACGAGAAGT+TGG + chr3.1:2590293-2590312 MS.gene058625:CDS 40.0%
AGAGATGGAGAAGAAGATTG+GGG + chr3.1:2586618-2586637 MS.gene058625:CDS 40.0%
AGCAAGGAGGTCATAAAGAT+CGG - chr3.1:2588892-2588911 None:intergenic 40.0%
AGGGGATGACAAAGAATATG+TGG + chr3.1:2587500-2587519 MS.gene058625:CDS 40.0%
AGTCATACCAAGTCCATACA+AGG - chr3.1:2588097-2588116 None:intergenic 40.0%
AGTTATTAGGCCTACTCTCT+AGG + chr3.1:2589738-2589757 MS.gene058625:intron 40.0%
ATATTGCCATGGCCGATATT+TGG - chr3.1:2589083-2589102 None:intergenic 40.0%
ATCAGCTTCAATTTCCATCC+TGG - chr3.1:2590223-2590242 None:intergenic 40.0%
ATCCTCACTCTTACACTTTC+AGG - chr3.1:2586703-2586722 None:intergenic 40.0%
ATCTATATCACCGTACAACC+CGG + chr3.1:2588294-2588313 MS.gene058625:intron 40.0%
ATGATGCCTTCTACTAAGCA+TGG - chr3.1:2589550-2589569 None:intergenic 40.0%
ATGTGGATCCTCAAAATGTG+CGG + chr3.1:2586440-2586459 MS.gene058625:CDS 40.0%
CAGATATAAGAGCAGATAGC+TGG + chr3.1:2588658-2588677 MS.gene058625:intron 40.0%
CCATCCAAATGTGACGTATT+AGG - chr3.1:2586964-2586983 None:intergenic 40.0%
CCATGTGACTCAGCTTAAAA+AGG - chr3.1:2588964-2588983 None:intergenic 40.0%
CCTAAAGTCTACGAGAAGTT+GGG + chr3.1:2590294-2590313 MS.gene058625:CDS 40.0%
CCTAATACGTCACATTTGGA+TGG + chr3.1:2586961-2586980 MS.gene058625:CDS 40.0%
GAGAGAGTTTGAGAAGATGA+AGG + chr3.1:2586642-2586661 MS.gene058625:CDS 40.0%
GCAACCTAATACGTCACATT+TGG + chr3.1:2586957-2586976 MS.gene058625:CDS 40.0%
GGATTAAGGATGACAAACCA+TGG - chr3.1:2589118-2589137 None:intergenic 40.0%
GGGAAGATAGTTGTGTTTAC+GGG + chr3.1:2587045-2587064 MS.gene058625:CDS 40.0%
GGGGATGACAAAGAATATGT+GGG + chr3.1:2587501-2587520 MS.gene058625:CDS 40.0%
GGTTCAGAAGAGTAGGAAAA+AGG + chr3.1:2586918-2586937 MS.gene058625:CDS 40.0%
GTAAACCAGTGCAACTCAAA+GGG - chr3.1:2589448-2589467 None:intergenic 40.0%
TATATTGCGACTCATCCATC+TGG + chr3.1:2590348-2590367 MS.gene058625:CDS 40.0%
TCCTCACTCTTACACTTTCA+GGG - chr3.1:2586702-2586721 None:intergenic 40.0%
TGCTTAAAAGTAGCCATGTC+AGG - chr3.1:2590055-2590074 None:intergenic 40.0%
TGCTTGTAGAGTCAGTGTAA+TGG - chr3.1:2589139-2589158 None:intergenic 40.0%
TGGTTATAAAGAGACAACGG+AGG - chr3.1:2587630-2587649 None:intergenic 40.0%
TTTGAAGAGAGGGTTGAGTA+AGG + chr3.1:2586747-2586766 MS.gene058625:CDS 40.0%
! ATTGGTATAGTGGTTGGTTC+TGG + chr3.1:2586517-2586536 MS.gene058625:CDS 40.0%
! CACTTTGCTGCTTGGTAATT+AGG + chr3.1:2587447-2587466 MS.gene058625:intron 40.0%
! CATGCTTGGTTATGCCATTT+GGG - chr3.1:2589385-2589404 None:intergenic 40.0%
! CTGTGTTTGGTGAAGAAAAG+GGG + chr3.1:2586809-2586828 MS.gene058625:CDS 40.0%
! GAAGATGAAGGCAGGTTTTA+AGG + chr3.1:2586654-2586673 MS.gene058625:CDS 40.0%
! GAAGCATTCATTAGCCCAAA+TGG + chr3.1:2589368-2589387 MS.gene058625:intron 40.0%
! GTTAATGCCTTTTGCTTACC+TGG + chr3.1:2587021-2587040 MS.gene058625:CDS 40.0%
! GTTTGATTTCGTCTTATGGC+AGG - chr3.1:2587931-2587950 None:intergenic 40.0%
! TATCGGCCATGGCAATATTT+TGG + chr3.1:2589085-2589104 MS.gene058625:intron 40.0%
! TGGGATCGTAACACAGATTT+TGG + chr3.1:2588769-2588788 MS.gene058625:intron 40.0%
! TTGCTGCTTGGTAATTAGGT+TGG + chr3.1:2587451-2587470 MS.gene058625:intron 40.0%
!! ACTTGTTTTCTGCACATCCT+CGG + chr3.1:2588068-2588087 MS.gene058625:intron 40.0%
!! CCTTTTTAAGCTGAGTCACA+TGG + chr3.1:2588961-2588980 MS.gene058625:intron 40.0%
!! TAATTAGGTTGGACATGCTG+TGG + chr3.1:2587462-2587481 MS.gene058625:intron 40.0%
!! TTTGGTGGTGAATGATCCTA+TGG + chr3.1:2586999-2587018 MS.gene058625:CDS 40.0%
!!! AGATGAAGGCAGGTTTTAAG+GGG + chr3.1:2586656-2586675 MS.gene058625:CDS 40.0%
AACACAACTATCTTCCCACC+AGG - chr3.1:2587042-2587061 None:intergenic 45.0%
AACCAATTCTTTGGCCCTCT+TGG - chr3.1:2586475-2586494 None:intergenic 45.0%
AAGGAGGTCATAAAGATCGG+TGG - chr3.1:2588889-2588908 None:intergenic 45.0%
ACGGAGGAATGATTACCTTC+TGG - chr3.1:2587614-2587633 None:intergenic 45.0%
AGAAACAACTTCGGCTAGCA+AGG - chr3.1:2588908-2588927 None:intergenic 45.0%
AGCAGGGAGATCATAAAGGT+TGG - chr3.1:2588863-2588882 None:intergenic 45.0%
AGGAGGTCATAAAGATCGGT+GGG - chr3.1:2588888-2588907 None:intergenic 45.0%
AGGGAGATCATAAAGGTTGG+TGG - chr3.1:2588860-2588879 None:intergenic 45.0%
AGTTGAAGGGAATTGGCATC+GGG + chr3.1:2586870-2586889 MS.gene058625:CDS 45.0%
CAGCTTCGACAGTAAAGTCA+CGG + chr3.1:2588935-2588954 MS.gene058625:intron 45.0%
CCCAACTTCTCGTAGACTTT+AGG - chr3.1:2590297-2590316 None:intergenic 45.0%
CTAACCAACATGTCCTGACA+TGG + chr3.1:2590039-2590058 MS.gene058625:intron 45.0%
CTTCTATTAGTTGCATCCGC+TGG + chr3.1:2590252-2590271 MS.gene058625:CDS 45.0%
GAAAGTGGAGGGAAAGTTGA+AGG + chr3.1:2586856-2586875 MS.gene058625:CDS 45.0%
GAAGAGTAGGAAAAAGGGTC+AGG + chr3.1:2586924-2586943 MS.gene058625:CDS 45.0%
GAGGGAAAGTTGAAGGGAAT+TGG + chr3.1:2586863-2586882 MS.gene058625:CDS 45.0%
GAGTTTGAGAAGATGAAGGC+AGG + chr3.1:2586646-2586665 MS.gene058625:CDS 45.0%
GGTAAACCAGTGCAACTCAA+AGG - chr3.1:2589449-2589468 None:intergenic 45.0%
GGTTGAGTAAGGAGAATGTG+TGG + chr3.1:2586758-2586777 MS.gene058625:CDS 45.0%
TACTGCAGAATTTACGCACC+AGG - chr3.1:2589470-2589489 None:intergenic 45.0%
! AATGCCTTTTGCTTACCTGG+TGG + chr3.1:2587024-2587043 MS.gene058625:CDS 45.0%
! ACCCTGAAAGTGTAAGAGTG+AGG + chr3.1:2586698-2586717 MS.gene058625:CDS 45.0%
! AGAGAAGGACATGGTGTTGA+AGG + chr3.1:2590441-2590460 MS.gene058625:CDS 45.0%
! ATGCCTTTTGCTTACCTGGT+GGG + chr3.1:2587025-2587044 MS.gene058625:CDS 45.0%
! CTATCCCTTGGTGTGAGAAT+GGG + chr3.1:2588209-2588228 MS.gene058625:intron 45.0%
! CTCTCGAGTCAACTCGTTTT+GGG - chr3.1:2588045-2588064 None:intergenic 45.0%
! GTTTGGTGAAGAAAAGGGGA+AGG + chr3.1:2586813-2586832 MS.gene058625:CDS 45.0%
! TATCCCTTGGTGTGAGAATG+GGG + chr3.1:2588210-2588229 MS.gene058625:intron 45.0%
! TCTATCCCTTGGTGTGAGAA+TGG + chr3.1:2588208-2588227 MS.gene058625:intron 45.0%
! TCTGCTCGTTTTCTTCCAGA+TGG - chr3.1:2590366-2590385 None:intergenic 45.0%
! TGCGGCATTTTAAGCCAAGA+GGG + chr3.1:2586458-2586477 MS.gene058625:CDS 45.0%
!! AGAATTACTGGCTCAAGCTC+AGG + chr3.1:2590383-2590402 MS.gene058625:CDS 45.0%
!! AGTGCATTGACTGAAAGTGG+AGG + chr3.1:2586844-2586863 MS.gene058625:CDS 45.0%
!! GTGCATTGACTGAAAGTGGA+GGG + chr3.1:2586845-2586864 MS.gene058625:CDS 45.0%
!! TTGAGTTGCACTGGTTTACC+TGG + chr3.1:2589449-2589468 MS.gene058625:intron 45.0%
!! TTGATCCCTTTGAGTTGCAC+TGG + chr3.1:2589440-2589459 MS.gene058625:intron 45.0%
AACAACTTCGGCTAGCAAGG+AGG - chr3.1:2588905-2588924 None:intergenic 50.0%
ACACTTTCAGGGTGCATTGC+AGG - chr3.1:2586691-2586710 None:intergenic 50.0%
ACATCCTCGGATGCCTTGTA+TGG + chr3.1:2588081-2588100 MS.gene058625:intron 50.0%
AGCCAAGAGGGCCAAAGAAT+TGG + chr3.1:2586470-2586489 MS.gene058625:CDS 50.0%
AGGCCATATTTCACCCAACG+TGG - chr3.1:2588248-2588267 None:intergenic 50.0%
CCGTACAAAACCGGGTTGTA+CGG - chr3.1:2588307-2588326 None:intergenic 50.0%
CTAGCTCAGCCGTACAAAAC+CGG - chr3.1:2588316-2588335 None:intergenic 50.0%
CTTCCCACCAGGTAAGCAAA+AGG - chr3.1:2587031-2587050 None:intergenic 50.0%
GCCATATTTCACCCAACGTG+GGG - chr3.1:2588246-2588265 None:intergenic 50.0%
GGCCATATTTCACCCAACGT+GGG - chr3.1:2588247-2588266 None:intergenic 50.0%
GGCTAGCAGGGAGATCATAA+AGG - chr3.1:2588867-2588886 None:intergenic 50.0%
GTAGCCATGTCAGGACATGT+TGG - chr3.1:2590046-2590065 None:intergenic 50.0%
GTGCTAATAGTCCCCACGTT+GGG + chr3.1:2588232-2588251 MS.gene058625:intron 50.0%
GTGTTGCCAAATATCGGCCA+TGG + chr3.1:2589074-2589093 MS.gene058625:intron 50.0%
TACGGCTTCCTTTCTCCAGA+AGG + chr3.1:2587596-2587615 MS.gene058625:CDS 50.0%
TAGCTCAGCCGTACAAAACC+GGG - chr3.1:2588315-2588334 None:intergenic 50.0%
TCCCCACGTTGGGTGAAATA+TGG + chr3.1:2588242-2588261 MS.gene058625:intron 50.0%
TCGGATGCCTTGTATGGACT+TGG + chr3.1:2588087-2588106 MS.gene058625:intron 50.0%
! AAGTCCATACAAGGCATCCG+AGG - chr3.1:2588088-2588107 None:intergenic 50.0%
! AGGGATAGACATCTAGAGCG+TGG - chr3.1:2588197-2588216 None:intergenic 50.0%
! CGCTCTAGATGTCTATCCCT+TGG + chr3.1:2588197-2588216 MS.gene058625:intron 50.0%
! GCTCTCGAGTCAACTCGTTT+TGG - chr3.1:2588046-2588065 None:intergenic 50.0%
! GTGCGGCATTTTAAGCCAAG+AGG + chr3.1:2586457-2586476 MS.gene058625:CDS 50.0%
! TAGACTTTAGGTGCCACACG+TGG - chr3.1:2590285-2590304 None:intergenic 50.0%
!! ATAAAGATCGGTGGGCTAGC+AGG - chr3.1:2588880-2588899 None:intergenic 50.0%
!! CAGTCTCAGAAGTGCTTAGC+AGG - chr3.1:2587188-2587207 None:intergenic 50.0%
!! CCGTACAACCCGGTTTTGTA+CGG + chr3.1:2588304-2588323 MS.gene058625:intron 50.0%
!! GAGAGGGCATTACACATGCT+TGG - chr3.1:2589399-2589418 None:intergenic 50.0%
!! TAAAGATCGGTGGGCTAGCA+GGG - chr3.1:2588879-2588898 None:intergenic 50.0%
!! TCGAGTCAACTCGTTTTGGG+AGG - chr3.1:2588042-2588061 None:intergenic 50.0%
!!! AACTCGTTTTGGGAGGTCAG+AGG - chr3.1:2588035-2588054 None:intergenic 50.0%
AGCACCCCATTCTCACACCA+AGG - chr3.1:2588217-2588236 None:intergenic 55.0%
AGGAAAAAGGGTCAGGAGCG+AGG + chr3.1:2586931-2586950 MS.gene058625:CDS 55.0%
CACACGTGGATCATAGCCAG+CGG - chr3.1:2590271-2590290 None:intergenic 55.0%
GCACCCCATTCTCACACCAA+GGG - chr3.1:2588216-2588235 None:intergenic 55.0%
GGAAAAAGGGTCAGGAGCGA+GGG + chr3.1:2586932-2586951 MS.gene058625:CDS 55.0%
GGTGCTAATAGTCCCCACGT+TGG + chr3.1:2588231-2588250 MS.gene058625:intron 55.0%
! ACTGGCTCAAGCTCAGGTGA+TGG + chr3.1:2590389-2590408 MS.gene058625:CDS 55.0%
! GGAGGTCAGAGGTGTAAACG+CGG - chr3.1:2588024-2588043 None:intergenic 55.0%
!! CGGTTTTGTACGGCTGAGCT+AGG + chr3.1:2588314-2588333 MS.gene058625:intron 55.0%
CATCCCCTCAGCACTGTGTC+TGG - chr3.1:2587488-2587507 None:intergenic 60.0%
TGTGGCCAGACACAGTGCTG+AGG + chr3.1:2587480-2587499 MS.gene058625:CDS 60.0%
! CGCTGGCTATGATCCACGTG+TGG + chr3.1:2590269-2590288 MS.gene058625:CDS 60.0%
! GTGGCCAGACACAGTGCTGA+GGG + chr3.1:2587481-2587500 MS.gene058625:CDS 60.0%
! TGGCCAGACACAGTGCTGAG+GGG + chr3.1:2587482-2587501 MS.gene058625:CDS 60.0%


Chromosome Type Strat End Strand Name
chr3.1 gene 2586202 2590473 2586202 ID=MS.gene058625
chr3.1 mRNA 2586202 2590473 2586202 ID=MS.gene058625.t1;Parent=MS.gene058625
chr3.1 exon 2586202 2587122 2586202 ID=MS.gene058625.t1.exon1;Parent=MS.gene058625.t1
chr3.1 CDS 2586202 2587122 2586202 ID=cds.MS.gene058625.t1;Parent=MS.gene058625.t1
chr3.1 exon 2587469 2587617 2587469 ID=MS.gene058625.t1.exon2;Parent=MS.gene058625.t1
chr3.1 CDS 2587469 2587617 2587469 ID=cds.MS.gene058625.t1;Parent=MS.gene058625.t1
chr3.1 exon 2590224 2590473 2590224 ID=MS.gene058625.t1.exon3;Parent=MS.gene058625.t1
chr3.1 CDS 2590224 2590473 2590224 ID=cds.MS.gene058625.t1;Parent=MS.gene058625.t1
Gene Sequence

>MS.gene058625

ATGTGTTGTGAAAATAATAAGAATATTAGGGTTGGTTCTCAAGGTTGTAACTTTAATGGGTTTTCTTCATTTACTTTGATTTCTAAGATATTAGATAAAAGGGCTTTTGAGATTAATAGGAATATTGGGTTGGGTTGTAAAGGTGTTAGCTTTAATAGGTTTTCGTCGTTTTCGAAGAATTTCAAGAGATTAGACAACAGGGGTTTTGAAGTTAATACGAATTTTAGGAGATTATACTATGTGGATCCTCAAAATGTGCGGCATTTTAAGCCAAGAGGGCCAAAGAATTGGTTTCAGAATCCTAGGCATGTTATGATTGGTATAGTGGTTGGTTCTGGTGTTTTTATAACTGTGTATTTTGGGAATATGGAAACTGTTCCTTATACGAAGAGAACACATTTGATTTTGATTCCGAAAGAGATGGAGAAGAAGATTGGGGAGAGAGAGTTTGAGAAGATGAAGGCAGGTTTTAAGGGGAAATTGTTGCCTGCAATGCACCCTGAAAGTGTAAGAGTGAGGATGATAGCGAATGATATTGTTGAAGCTTTGAAGAGAGGGTTGAGTAAGGAGAATGTGTGGAGTGATATAGATTATGCTTCAGAAAATACTGTGTTTGGTGAAGAAAAGGGGAAGGAGACAATTAGTGCATTGACTGAAAGTGGAGGGAAAGTTGAAGGGAATTGGCATCGGGAAGATGAGATTCTTGATGATAAATGGGTTCAGAAGAGTAGGAAAAAGGGTCAGGAGCGAGGGTCGCAACCTAATACGTCACATTTGGATGGATTGAATTGGGAGATTTTGGTGGTGAATGATCCTATGGTTAATGCCTTTTGCTTACCTGGTGGGAAGATAGTTGTGTTTACGGGTTTGCTCGAACATTTTAGAAGTGATGCAGAGATAGCAACTATTATTGGACATGAGGTATTTGTTTGATTCGTTTAACTTATTAGGCTTGTTTGGATTAACTTATTTGAACTTATATACCTGCTAAGCACTTCTGAGACTGTTAAAGAGATATTATGGAACACAATATATTACATGTCTGAAAGTTTTTTTCTATTTATGATAAATGTTTATAGCTTATATGCAAACAAATTGACTTTATTTTATCTTTTGTTATAGAAATAGCTTATACTTAAGCGCTTATATGATATAGGCTTATGCTAAAAGCGCTTACTTAAGCTATTTTTGCAAACAAGGCAATTGTTTTTGCAGTTTAACATGTTTAGGAGACATAAAGTCTAACACTTTGCTGCTTGGTAATTAGGTTGGACATGCTGTGGCCAGACACAGTGCTGAGGGGATGACAAAGAATATGTGGGTTTTAATACTAAACTTCATACTTTATCAATTCGTCACACCTGATATTGTCAACACTATGTCATCACTTCTCTTACGGCTTCCTTTCTCCAGAAGGTAATCATTCCTCCGTTGTCTCTTTATAACCAATTGAATTTTTGTATTGTTCCTTAATAATAGTAGACTCATTTCATTGATACATAGGTAATGTTTGTTAGACAGGTTAGAATAGGAGTACACATCAAGTATTAAGAGAAGTGAAAAACATGAAATTAGGGAAAAGATTTATAAATTTTACTTGAATTAGTGGAACTAGAGGTATTAGAATAGATTGTTCTGTTATGTTTTGTTCATATGCAAAATGCTGCCCTATATGTTTAGTCATGTAGCAATGTTGTTTTAGGCCTTCACAATGAATTCTTCTATTCCTGCCATAAGACGAAATCAAACACAATTTTTCATCAATTTGAATGTAGTATGAGCATGGTTGTCAAACTCGTAAGTCAACTTGTAGATTCGTCCGCGTTTACACCTCTGACCTCCCAAAACGAGTTGACTCGAGAGCAGACTTGTTTTCTGCACATCCTCGGATGCCTTGTATGGACTTGGTATGACTTGCGATTCTGTTGTGAGTTGACGAATTCGCCAAAAGAAAAAAAAAAAAGGTCACATTTTGGCCTTTTATTATTTTGGCCACGCTCTAGATGTCTATCCCTTGGTGTGAGAATGGGGTGCTAATAGTCCCCACGTTGGGTGAAATATGGCCTGATAAAAGTAGCTATAAGTAGGAGACATCTATATCACCGTACAACCCGGTTTTGTACGGCTGAGCTAGGCCAAAACCACACTTTAAGAGAAAATATATGTATATGCATTGCAGCTTTCAAAGTTGAATTGTACGGTTGAAATTGGTAGAATCACAATGGATTAAGATGCTATTGATTAAAATGGTTTCAAATGATTTGAACTGTGAAGACTGATCGATAAAACAGGGCATTCATTATGTGATCTTTCATAAGGGGCATTTGATAGATTAGAAAGACATTATCAAATGCTTGAACATGAACAACTTCAAGAGTTCATGCGTAAACAGAATGCAATACTAAATACTAAACTCAAACGCAAACTAGACGGCTTTAGTAAATGATAGTGATAAACAGATATAAGAGCAGATAGCTGGTACTTTGTACACAGCTAATGTGATGATGTTAGTCTAAATCAAGATTTTATTTAGAAACGAAAAAGATAGTCAAAATCGTAAATTGTTGTGGGATCGTAACACAGATTTTGGTAAAATTCAAAGTAGCATCTTCAACAACCAAGCTTTTCTACTGAAATAAGTATTGTCGCTCTTTGCCACCAACCTTTATGATCTCCCTGCTAGCCCACCGATCTTTATGACCTCCTTGCTAGCCGAAGTTGTTTCTTGTTATTCAGCTTCGACAGTAAAGTCACGGTGCCCTTTTTAAGCTGAGTCACATGGGATGATAGATGAACCTTCAAAATAGGAAGTAACTTCAATTTGTAGGTGACATTCCCATACCTGCGAGTTTTTTTTTGTAAATTATATGAAGTGTTGCCAAATATCGGCCATGGCAATATTTTGGCTTTCTGCCATGGTTTGTCATCCTTAATCCATTACACTGACTCTACAAGCAACAACTAAAATGTACTTTCTGTCCATATGTACAGTTTTTGTGTTGGTCACAAAATGTTTCTCCCTTAGTACTTGACAGAAATTTATACTGCGTGTTTCCAACTCTTCATTTATACAATAATGCCATAAAAAAATAAAAAATAAAAAATACCATGACCAACCTCTAAATATGAATTGGAATTTTGATTTATCATATATTGGAAAGTTGTAGAAGCATTCATTAGCCCAAATGGCATAACCAAGCATGTGTAATGCCCTCTCCTTAAAAAGTTATCATTGTTATTGATCCCTTTGAGTTGCACTGGTTTACCTGGTGCGTAAATTCTGCAGTAATCTTTGTGCAATCTATAATTGCCTACTCACAAATTACATCCATATTTGCATTAATTCCATGCTTAGTAGAAGGCATCATGATAAAACATTGTAGATAAAGAACAAAGTTCTACAGAACTATTTGTTAGAAAGAAAACATGTAATTCAATGAAGTGAATCACAGTTAGTAATAATAACTAAACAAAATTTACGTGTATGAGATAGACCAAAGTAATTTATTTGCATAGGAATGCTTAAATGTTCTTGGAGTTATTAGGCCTACTCTCTAGGATATTATAGAATAAGAAACATATTGTATGTTACCCTGTACTACTTTCAATTGTATTCGAGCCAATTTTAAATTTGTACATTTTACGACTATAGTGAGTCTGATTTCGGAGCATGTGAGATATATACACGTTATATAAAGTTTTTCATTTACATTTGTTTCTTGTTGGACTGTGGATTAGTCCTAAGTTTTCATTTTAATCTTCTTTTCAATTTTCTTGTGCTTCATTTTAACTTCGTGGATGCATCACCATCAAATTTTCATATTCCATTTTGACTATCTAACCAACATGTCCTGACATGGCTACTTTTAAGCATGATTATTTTAAATATACATAATTATATTATCATCATTCACCCAAGTATAAACAAAACTAATGTAATTTTAACTATACACAAATGTGGTGAATGATGGTAGTATATTTTGTTTCTATTTTTTATTACAAATTTTTCCACAATTTTCCAGGATGGAAATTGAAGCTGATTACATTGGTCTTCTATTAGTTGCATCCGCTGGCTATGATCCACGTGTGGCACCTAAAGTCTACGAGAAGTTGGGAAAAATATCCGGCGATTCTAAGCTTTTAGATTATATTGCGACTCATCCATCTGGAAGAAAACGAGCAGAATTACTGGCTCAAGCTCAGGTGATGGATGAAGCTCTTACTATATATAAGAATGTAAGAGAAGGACATGGTGTTGAAGGATTTCTTTAG

Protein sequence

>MS.gene058625.t1

MCCENNKNIRVGSQGCNFNGFSSFTLISKILDKRAFEINRNIGLGCKGVSFNRFSSFSKNFKRLDNRGFEVNTNFRRLYYVDPQNVRHFKPRGPKNWFQNPRHVMIGIVVGSGVFITVYFGNMETVPYTKRTHLILIPKEMEKKIGEREFEKMKAGFKGKLLPAMHPESVRVRMIANDIVEALKRGLSKENVWSDIDYASENTVFGEEKGKETISALTESGGKVEGNWHREDEILDDKWVQKSRKKGQERGSQPNTSHLDGLNWEILVVNDPMVNAFCLPGGKIVVFTGLLEHFRSDAEIATIIGHEVGHAVARHSAEGMTKNMWVLILNFILYQFVTPDIVNTMSSLLLRLPFSRRMEIEADYIGLLLVASAGYDPRVAPKVYEKLGKISGDSKLLDYIATHPSGRKRAELLAQAQVMDEALTIYKNVREGHGVEGFL