Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66864.t1 | XP_003615684.2 | 83.1 | 568 | 28 | 4 | 1 | 526 | 39 | 580 | 8.90E-254 | 885.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66864.t1 | Q8GV43 | 53.3 | 546 | 175 | 5 | 25 | 526 | 90 | 599 | 3.6e-163 | 576.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66864.t1 | G7KE98 | 83.1 | 568 | 28 | 4 | 1 | 526 | 39 | 580 | 6.4e-254 | 885.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049660 | MS.gene66864 | 0.804965 | 1.68E-49 | -1.69E-46 |
| MS.gene05054 | MS.gene66864 | 0.809318 | 2.01E-50 | -1.69E-46 |
| MS.gene055251 | MS.gene66864 | 0.806319 | 8.72E-50 | -1.69E-46 |
| MS.gene056526 | MS.gene66864 | 0.8149 | 1.22E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66864.t1 | MTR_5g071010 | 83.803 | 568 | 24 | 4 | 1 | 526 | 39 | 580 | 0.0 | 926 |
| MS.gene66864.t1 | MTR_5g082620 | 52.890 | 571 | 189 | 9 | 1 | 526 | 40 | 575 | 0.0 | 582 |
| MS.gene66864.t1 | MTR_5g082590 | 50.609 | 575 | 193 | 8 | 1 | 526 | 36 | 568 | 0.0 | 556 |
| MS.gene66864.t1 | MTR_3g070720 | 51.754 | 570 | 196 | 8 | 1 | 526 | 45 | 579 | 0.0 | 550 |
| MS.gene66864.t1 | MTR_3g069280 | 53.143 | 525 | 173 | 7 | 47 | 526 | 62 | 558 | 0.0 | 528 |
| MS.gene66864.t1 | MTR_5g082580 | 44.330 | 582 | 234 | 8 | 1 | 526 | 46 | 593 | 8.89e-165 | 481 |
| MS.gene66864.t1 | MTR_3g070710 | 45.804 | 572 | 224 | 12 | 1 | 526 | 42 | 573 | 5.15e-159 | 465 |
| MS.gene66864.t1 | MTR_3g070560 | 43.881 | 572 | 237 | 10 | 1 | 526 | 41 | 574 | 4.73e-151 | 445 |
| MS.gene66864.t1 | MTR_5g071040 | 44.190 | 568 | 213 | 11 | 1 | 526 | 54 | 559 | 1.12e-144 | 428 |
| MS.gene66864.t1 | MTR_3g070720 | 48.361 | 488 | 173 | 8 | 1 | 444 | 45 | 497 | 1.46e-142 | 420 |
| MS.gene66864.t1 | MTR_3g070720 | 47.826 | 460 | 161 | 8 | 1 | 416 | 45 | 469 | 3.06e-124 | 373 |
| MS.gene66864.t1 | MTR_3g070560 | 41.743 | 436 | 174 | 7 | 135 | 526 | 2 | 401 | 5.18e-108 | 329 |
| MS.gene66864.t1 | MTR_3g070720 | 47.355 | 397 | 145 | 7 | 1 | 368 | 45 | 406 | 4.93e-100 | 308 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene66864.t1 | AT2G40116 | 52.531 | 573 | 182 | 8 | 1 | 526 | 70 | 599 | 0.0 | 591 |
| MS.gene66864.t1 | AT5G58700 | 53.860 | 570 | 186 | 8 | 1 | 525 | 45 | 582 | 0.0 | 588 |
| MS.gene66864.t1 | AT5G58700 | 53.860 | 570 | 186 | 8 | 1 | 525 | 45 | 582 | 0.0 | 588 |
| MS.gene66864.t1 | AT5G58690 | 51.056 | 568 | 190 | 6 | 1 | 526 | 24 | 545 | 0.0 | 552 |
| MS.gene66864.t1 | AT5G58690 | 51.056 | 568 | 190 | 6 | 1 | 526 | 43 | 564 | 0.0 | 552 |
| MS.gene66864.t1 | AT5G58690 | 51.056 | 568 | 190 | 6 | 1 | 526 | 43 | 564 | 0.0 | 552 |
| MS.gene66864.t1 | AT3G08510 | 52.189 | 571 | 185 | 11 | 1 | 526 | 40 | 567 | 0.0 | 542 |
| MS.gene66864.t1 | AT3G08510 | 52.189 | 571 | 185 | 11 | 1 | 526 | 40 | 567 | 0.0 | 542 |
| MS.gene66864.t1 | AT3G55940 | 50.963 | 571 | 193 | 9 | 1 | 525 | 40 | 569 | 0.0 | 528 |
| MS.gene66864.t1 | AT5G58700 | 55.090 | 501 | 150 | 7 | 70 | 525 | 4 | 474 | 0.0 | 522 |
| MS.gene66864.t1 | AT3G08510 | 49.037 | 571 | 174 | 12 | 1 | 526 | 40 | 538 | 2.54e-165 | 480 |
| MS.gene66864.t1 | AT3G08510 | 49.037 | 571 | 174 | 12 | 1 | 526 | 40 | 538 | 2.54e-165 | 480 |
| MS.gene66864.t1 | AT5G58670 | 42.281 | 570 | 222 | 8 | 1 | 526 | 39 | 545 | 5.82e-145 | 428 |
| MS.gene66864.t1 | AT4G38530 | 42.207 | 571 | 220 | 12 | 1 | 526 | 39 | 544 | 1.25e-138 | 412 |
| MS.gene66864.t1 | AT3G47290 | 37.500 | 560 | 238 | 11 | 3 | 526 | 34 | 517 | 6.60e-114 | 348 |
| MS.gene66864.t1 | AT3G47290 | 37.455 | 558 | 237 | 11 | 3 | 524 | 34 | 515 | 2.72e-112 | 345 |
| MS.gene66864.t1 | AT3G47220 | 37.611 | 561 | 235 | 15 | 3 | 526 | 35 | 517 | 1.16e-105 | 327 |
Find 98 sgRNAs with CRISPR-Local
Find 289 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTATTCAATGCCTTTATAAT+AGG | 0.127135 | 5.3:-35602241 | None:intergenic |
| GGATTGAATACCTCATTATT+TGG | 0.164810 | 5.3:-35604744 | None:intergenic |
| CTGCTCAGGTAATTTCTTAT+AGG | 0.203651 | 5.3:+35603461 | MS.gene66864:CDS |
| AACATCATCTTTGGTGGAAT+TGG | 0.217676 | 5.3:-35602296 | None:intergenic |
| AGAATTCTCTCTCACACTTT+TGG | 0.234698 | 5.3:-35603867 | None:intergenic |
| GCAAGTTCAGGCACAGTTAA+AGG | 0.267197 | 5.3:-35605660 | None:intergenic |
| CAAATGTTTGAAATCCATTA+AGG | 0.273167 | 5.3:+35603360 | MS.gene66864:CDS |
| GACCAGTATATATGAAATAA+TGG | 0.273183 | 5.3:-35602168 | None:intergenic |
| AGCGAACGCATGTTCCTTAA+TGG | 0.273224 | 5.3:-35603374 | None:intergenic |
| TTCACTTCCAACTTCTCTTT+AGG | 0.284668 | 5.3:-35604765 | None:intergenic |
| TTGGAATTTAAGTACTCTTT+TGG | 0.290635 | 5.3:-35603848 | None:intergenic |
| ATCCTATACTTCAGTTCTTC+AGG | 0.310159 | 5.3:-35603806 | None:intergenic |
| CAAAGACAATAGAGGATAAC+TGG | 0.310479 | 5.3:+35605607 | MS.gene66864:CDS |
| TCCCATTATTTCATATATAC+TGG | 0.316971 | 5.3:+35602166 | MS.gene66864:CDS |
| TATTCAATGCCTTTATAATA+GGG | 0.323811 | 5.3:-35602240 | None:intergenic |
| CAACCCTCCTATTAGATCTA+AGG | 0.337822 | 5.3:+35601108 | MS.gene66864:CDS |
| ATAAAATTCGAGATAATTAC+AGG | 0.353684 | 5.3:-35603503 | None:intergenic |
| TTCTTCATTGTTACATCAGC+TGG | 0.355429 | 5.3:-35605582 | None:intergenic |
| ATAAACCTCCAGAGCTGTTC+CGG | 0.366121 | 5.3:-35600929 | None:intergenic |
| ATGAGGCAGGTTGGCATAGC+TGG | 0.369626 | 5.3:+35605555 | MS.gene66864:intron |
| TAAAACAAGAACATCATCTT+TGG | 0.382673 | 5.3:-35602305 | None:intergenic |
| ACATCATCTTTGGTGGAATT+GGG | 0.394799 | 5.3:-35602295 | None:intergenic |
| TGTGGGAGATGGATGGAGTA+TGG | 0.405885 | 5.3:+35604891 | MS.gene66864:CDS |
| TGTTCTAATTCAGGTTCATC+AGG | 0.406713 | 5.3:+35602126 | MS.gene66864:intron |
| CCTACATTCATAAGAAAGTC+TGG | 0.411811 | 5.3:-35604720 | None:intergenic |
| GAGTTGATTTCCAGTGAGAT+AGG | 0.412212 | 5.3:-35602197 | None:intergenic |
| GGATTCTGATGAAGATGAAT+GGG | 0.415064 | 5.3:+35603916 | MS.gene66864:CDS |
| TAGTGATATCCCTATTATAA+AGG | 0.415361 | 5.3:+35602231 | MS.gene66864:CDS |
| AGGGATATGGCAGAAATCTT+TGG | 0.418091 | 5.3:+35604646 | MS.gene66864:intron |
| AAACATTTGATCAAATCAAC+AGG | 0.419291 | 5.3:-35603346 | None:intergenic |
| GAGTTGTTGAGCTTGATATT+TGG | 0.429323 | 5.3:+35602272 | MS.gene66864:CDS |
| TACATTACCTTAGATCTAAT+AGG | 0.436253 | 5.3:-35601115 | None:intergenic |
| ACTACAAGCCACTGGTTGGC+TGG | 0.443070 | 5.3:+35604589 | MS.gene66864:CDS |
| ACATGACTCCGGAACAGCTC+TGG | 0.445811 | 5.3:+35600921 | None:intergenic |
| ACCAGTATATATGAAATAAT+GGG | 0.446982 | 5.3:-35602167 | None:intergenic |
| AAGAGTTATTATGACTGGAT+AGG | 0.447144 | 5.3:-35603404 | None:intergenic |
| GCTTCCTTCAAACTACCCTT+AGG | 0.448231 | 5.3:-35604338 | None:intergenic |
| CCAGACTTTCTTATGAATGT+AGG | 0.454137 | 5.3:+35604720 | MS.gene66864:CDS |
| ATTCAATCCTAAAGAGAAGT+TGG | 0.456474 | 5.3:+35604758 | MS.gene66864:CDS |
| CCTTCAAGCAAAAGCTGCTC+AGG | 0.456718 | 5.3:+35603447 | MS.gene66864:CDS |
| GAGAGAGGTTGATGATGAGA+AGG | 0.459589 | 5.3:+35600964 | MS.gene66864:CDS |
| AGGATTCTGATGAAGATGAA+TGG | 0.465159 | 5.3:+35603915 | MS.gene66864:CDS |
| TACACAAAATGAAGATGATA+AGG | 0.467374 | 5.3:+35603964 | MS.gene66864:CDS |
| AGGATAACTGGATACCTACT+TGG | 0.472804 | 5.3:+35605619 | MS.gene66864:CDS |
| CTTGAAGGTCTGAGGTAAGA+TGG | 0.476823 | 5.3:-35603432 | None:intergenic |
| GAGGTTGATGATGAGAAGGA+TGG | 0.479346 | 5.3:+35600968 | MS.gene66864:CDS |
| CGAGGTGACACGTGTACCCT+TGG | 0.479526 | 5.3:-35604562 | None:intergenic |
| CATCGAATGTTTAGATCCAA+TGG | 0.482284 | 5.3:+35604675 | MS.gene66864:CDS |
| GGAAGTGAAGAAGACTCTTA+AGG | 0.485765 | 5.3:+35604779 | MS.gene66864:CDS |
| GTGAATTCTTCTTCCCAAGT+AGG | 0.486822 | 5.3:-35605633 | None:intergenic |
| AGAGTTATTATGACTGGATA+GGG | 0.489103 | 5.3:-35603403 | None:intergenic |
| AAAACCTAAGGGTAGTTTGA+AGG | 0.497454 | 5.3:+35604334 | MS.gene66864:CDS |
| TCTTCAAGAGTTATTATGAC+TGG | 0.499791 | 5.3:-35603409 | None:intergenic |
| ATTATAAAGGCATTGAATAG+AGG | 0.500119 | 5.3:+35602244 | MS.gene66864:CDS |
| ATCGAATGTTTAGATCCAAT+GGG | 0.505076 | 5.3:+35604676 | MS.gene66864:CDS |
| TGGATAGGTTAAAATATATG+TGG | 0.514224 | 5.3:+35604873 | MS.gene66864:intron |
| CACCTGAAGAACTGAAGTAT+AGG | 0.517294 | 5.3:+35603804 | MS.gene66864:CDS |
| GAAGAAAACAAAGACAATAG+AGG | 0.517311 | 5.3:+35605599 | MS.gene66864:CDS |
| GTTCCACTTTACAATCGAAA+AGG | 0.517940 | 5.3:+35605786 | MS.gene66864:CDS |
| GTATCCTCTTCGAGAACTAA+AGG | 0.519491 | 5.3:+35603537 | MS.gene66864:CDS |
| AACAAGAACATCATCTTTGG+TGG | 0.520787 | 5.3:-35602302 | None:intergenic |
| GGTCATAACTCCTATCTCAC+TGG | 0.522887 | 5.3:+35602187 | MS.gene66864:CDS |
| TACTTCAGTTCTTCAGGTGA+CGG | 0.528094 | 5.3:-35603800 | None:intergenic |
| ATTACCTTAGATCTAATAGG+AGG | 0.531527 | 5.3:-35601112 | None:intergenic |
| TGAACTTGCTTTGCTTAGAG+TGG | 0.533590 | 5.3:+35605674 | MS.gene66864:CDS |
| GTTAAAATATATGTGGGAGA+TGG | 0.540418 | 5.3:+35604880 | MS.gene66864:CDS |
| ACTCTAAGCAAAGCAAGTTC+AGG | 0.549966 | 5.3:-35605672 | None:intergenic |
| GGTTGAATTCAGCAGAGAAA+AGG | 0.550704 | 5.3:-35601090 | None:intergenic |
| TGGAGGAAGTGCTGCAGAAG+CGG | 0.552240 | 5.3:+35601011 | MS.gene66864:CDS |
| AAATATATGTGGGAGATGGA+TGG | 0.558373 | 5.3:+35604884 | MS.gene66864:CDS |
| GAGGTGACACGTGTACCCTT+GGG | 0.560335 | 5.3:-35604561 | None:intergenic |
| CCAATCACTGAACTAAAACA+AGG | 0.561367 | 5.3:+35605753 | MS.gene66864:CDS |
| TGATACACAGAAGGTGGTGG+AGG | 0.563976 | 5.3:+35600994 | MS.gene66864:CDS |
| GTTGCTGAAATCAAAATCAA+AGG | 0.564989 | 5.3:+35603895 | MS.gene66864:CDS |
| TATCGTGGAGGTTCAGAGAG+AGG | 0.571463 | 5.3:+35600949 | MS.gene66864:CDS |
| TGATGAAGATGAATGGGGAA+AGG | 0.584071 | 5.3:+35603922 | MS.gene66864:CDS |
| GAATGTAGGTCCAAATAATG+AGG | 0.588015 | 5.3:+35604734 | MS.gene66864:CDS |
| CTCGTCGAACTACAAGCCAC+TGG | 0.588860 | 5.3:+35604581 | MS.gene66864:CDS |
| TGGTGGGGCCCACATGACTC+CGG | 0.590939 | 5.3:+35600910 | None:intergenic |
| CAATCACTGAACTAAAACAA+GGG | 0.591710 | 5.3:+35605754 | MS.gene66864:CDS |
| TTACCTTAGATCTAATAGGA+GGG | 0.601825 | 5.3:-35601111 | None:intergenic |
| TTCAGGCACAGTTAAAGGAA+AGG | 0.610669 | 5.3:-35605655 | None:intergenic |
| AATTGATACACAGAAGGTGG+TGG | 0.611302 | 5.3:+35600991 | MS.gene66864:CDS |
| TATATGAAATAATGGGACAA+TGG | 0.614028 | 5.3:-35602160 | None:intergenic |
| TGACTCCGGAACAGCTCTGG+AGG | 0.614053 | 5.3:+35600924 | MS.gene66864:CDS |
| GATTCTGATGAAGATGAATG+GGG | 0.619806 | 5.3:+35603917 | MS.gene66864:CDS |
| CCAAGCATCCAGCCAACCAG+TGG | 0.621623 | 5.3:-35604597 | None:intergenic |
| GGATAGGTTAAAATATATGT+GGG | 0.623354 | 5.3:+35604874 | MS.gene66864:intron |
| GGATAACTGGATACCTACTT+GGG | 0.627164 | 5.3:+35605620 | MS.gene66864:CDS |
| TGGAATTGATACACAGAAGG+TGG | 0.632697 | 5.3:+35600988 | MS.gene66864:CDS |
| TCGAACTACAAGCCACTGGT+TGG | 0.635611 | 5.3:+35604585 | MS.gene66864:CDS |
| GGATGGAATTGATACACAGA+AGG | 0.635682 | 5.3:+35600985 | MS.gene66864:CDS |
| CACGCCTTTAGTTCTCGAAG+AGG | 0.638865 | 5.3:-35603541 | None:intergenic |
| GCTCTGGAGGTTTATCGTGG+AGG | 0.645693 | 5.3:+35600937 | MS.gene66864:CDS |
| ACAGCTCTGGAGGTTTATCG+TGG | 0.661181 | 5.3:+35600934 | MS.gene66864:CDS |
| CAGTGGCTTGTAGTTCGACG+AGG | 0.682847 | 5.3:-35604580 | None:intergenic |
| TCGAATGTTTAGATCCAATG+GGG | 0.693138 | 5.3:+35604677 | MS.gene66864:CDS |
| CGAATGTTTAGATCCAATGG+GGG | 0.716144 | 5.3:+35604678 | MS.gene66864:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAAAAATAATAAAAATT+TGG | - | chr5.3:35602492-35602511 | None:intergenic | 0.0% |
| !! | GTTTATAACTTATATAAAAA+CGG | - | chr5.3:35604059-35604078 | None:intergenic | 10.0% |
| !!! | TACAATTTGATTTTTTATAA+AGG | - | chr5.3:35602903-35602922 | None:intergenic | 10.0% |
| !!! | ATAAAACGTGTAAATTTTAT+AGG | + | chr5.3:35603611-35603630 | MS.gene66864:intron | 15.0% |
| !!! | TAAAACGTGTAAATTTTATA+GGG | + | chr5.3:35603612-35603631 | MS.gene66864:intron | 15.0% |
| !!! | TTGTTTAAATTTTCATCATT+TGG | - | chr5.3:35603776-35603795 | None:intergenic | 15.0% |
| !! | AAAATAAAGACTGTTTGAAT+TGG | - | chr5.3:35604181-35604200 | None:intergenic | 20.0% |
| !! | AATTCAAAGAAAAAGATTAC+TGG | - | chr5.3:35603238-35603257 | None:intergenic | 20.0% |
| !! | ACCAGTATATATGAAATAAT+GGG | - | chr5.3:35602170-35602189 | None:intergenic | 20.0% |
| !! | AGTAGATTATTTGTATACTT+AGG | - | chr5.3:35604442-35604461 | None:intergenic | 20.0% |
| !! | ATAAAATTCGAGATAATTAC+AGG | - | chr5.3:35603506-35603525 | None:intergenic | 20.0% |
| !! | ATTAACTTAACATCACTAAT+AGG | - | chr5.3:35602103-35602122 | None:intergenic | 20.0% |
| !! | ATTCTACATTCTAATTGTAA+TGG | + | chr5.3:35604488-35604507 | MS.gene66864:intron | 20.0% |
| !! | CAAACATATGCATTAAATTA+AGG | - | chr5.3:35602010-35602029 | None:intergenic | 20.0% |
| !! | TAGATGATTACTTAAACATT+TGG | + | chr5.3:35603734-35603753 | MS.gene66864:intron | 20.0% |
| !! | TATTCAATGCCTTTATAATA+GGG | - | chr5.3:35602243-35602262 | None:intergenic | 20.0% |
| !! | TTAGAATGTAGAATAGTTTA+AGG | - | chr5.3:35604482-35604501 | None:intergenic | 20.0% |
| !! | TTGAAGCTTAAATAACTTTA+AGG | + | chr5.3:35605070-35605089 | MS.gene66864:intron | 20.0% |
| !! | TTGTATTTAATTATTCTCAC+TGG | + | chr5.3:35604853-35604872 | MS.gene66864:intron | 20.0% |
| !!! | AATCATTTGTTATATCTGAA+AGG | + | chr5.3:35603650-35603669 | MS.gene66864:intron | 20.0% |
| !!! | AGTTTTGAAGTTAATATGAA+TGG | + | chr5.3:35601859-35601878 | MS.gene66864:intron | 20.0% |
| !!! | ATTATGTTGTTTTGATTCAA+TGG | + | chr5.3:35601152-35601171 | MS.gene66864:intron | 20.0% |
| !!! | ATTATTGAATATTTTCTCTC+TGG | - | chr5.3:35601278-35601297 | None:intergenic | 20.0% |
| !!! | TTGGTATTTTTACTAGTTAT+TGG | + | chr5.3:35601951-35601970 | MS.gene66864:intron | 20.0% |
| !!! | TTTATCTTCTTCAACTTTTA+AGG | - | chr5.3:35604363-35604382 | None:intergenic | 20.0% |
| !!! | TTTCTTTCTATTTTCTTACA+GGG | + | chr5.3:35604200-35604219 | MS.gene66864:intron | 20.0% |
| !!! | TTTTCTTTCTATTTTCTTAC+AGG | + | chr5.3:35604199-35604218 | MS.gene66864:intron | 20.0% |
| ! | AAACATCTTATAACATGTTC+AGG | - | chr5.3:35604098-35604117 | None:intergenic | 25.0% |
| ! | AAACATTTGATCAAATCAAC+AGG | - | chr5.3:35603349-35603368 | None:intergenic | 25.0% |
| ! | AAAGTTATTTAAGCTTCAAG+TGG | - | chr5.3:35605069-35605088 | None:intergenic | 25.0% |
| ! | ACATTATCTTGTGAAAATAG+AGG | - | chr5.3:35604022-35604041 | None:intergenic | 25.0% |
| ! | AGGTCTATTTACAAGTTATT+TGG | + | chr5.3:35605160-35605179 | MS.gene66864:intron | 25.0% |
| ! | ATAAATTCACATGTAAGCTA+AGG | - | chr5.3:35605537-35605556 | None:intergenic | 25.0% |
| ! | CAAATTAAGTAAACTTGGAT+TGG | - | chr5.3:35602041-35602060 | None:intergenic | 25.0% |
| ! | CTATTCAATGCCTTTATAAT+AGG | - | chr5.3:35602244-35602263 | None:intergenic | 25.0% |
| ! | CTTTGAATTTACATATTTGC+TGG | + | chr5.3:35603249-35603268 | MS.gene66864:intron | 25.0% |
| ! | GACCAGTATATATGAAATAA+TGG | - | chr5.3:35602171-35602190 | None:intergenic | 25.0% |
| ! | GCAGTTATATTGTAAATCAA+AGG | - | chr5.3:35604999-35605018 | None:intergenic | 25.0% |
| ! | GGATAGGTTAAAATATATGT+GGG | + | chr5.3:35604874-35604893 | MS.gene66864:intron | 25.0% |
| ! | GTTAATTTCTGTTCTAATTC+AGG | + | chr5.3:35602117-35602136 | MS.gene66864:intron | 25.0% |
| ! | TAAAACAAGAACATCATCTT+TGG | - | chr5.3:35602308-35602327 | None:intergenic | 25.0% |
| ! | TAAATAGAAAAAACTTACCC+TGG | - | chr5.3:35604965-35604984 | None:intergenic | 25.0% |
| ! | TACACAAAATGAAGATGATA+AGG | + | chr5.3:35603964-35603983 | MS.gene66864:CDS | 25.0% |
| ! | TACATTACCTTAGATCTAAT+AGG | - | chr5.3:35601118-35601137 | None:intergenic | 25.0% |
| ! | TACTAGTTATTGGATGAAAA+AGG | + | chr5.3:35601961-35601980 | MS.gene66864:intron | 25.0% |
| ! | TAGAATAGTTTAAGGAAAAG+TGG | - | chr5.3:35604474-35604493 | None:intergenic | 25.0% |
| ! | TAGTGATATCCCTATTATAA+AGG | + | chr5.3:35602231-35602250 | MS.gene66864:CDS | 25.0% |
| ! | TCCCATTATTTCATATATAC+TGG | + | chr5.3:35602166-35602185 | MS.gene66864:CDS | 25.0% |
| ! | TGGATAGGTTAAAATATATG+TGG | + | chr5.3:35604873-35604892 | MS.gene66864:intron | 25.0% |
| ! | TTCTGCAAATTAAGTAAACT+TGG | - | chr5.3:35602046-35602065 | None:intergenic | 25.0% |
| ! | TTGAAGTTAATATGAATGGA+AGG | + | chr5.3:35601863-35601882 | MS.gene66864:intron | 25.0% |
| ! | TTTAATTATTCTCACTGGAT+AGG | + | chr5.3:35604858-35604877 | MS.gene66864:intron | 25.0% |
| !! | ATATCCTCAAAAAGTTTTTC+TGG | - | chr5.3:35604539-35604558 | None:intergenic | 25.0% |
| !! | ATTTTGTGTATGTACAACAT+CGG | - | chr5.3:35603954-35603973 | None:intergenic | 25.0% |
| !! | CAAATGTTTGAAATCCATTA+AGG | + | chr5.3:35603360-35603379 | MS.gene66864:CDS | 25.0% |
| !! | TATATGAAATAATGGGACAA+TGG | - | chr5.3:35602163-35602182 | None:intergenic | 25.0% |
| !! | TATCCTCAAAAAGTTTTTCT+GGG | - | chr5.3:35604538-35604557 | None:intergenic | 25.0% |
| !! | TGGTTTCTATTTTGTATGAT+AGG | + | chr5.3:35604508-35604527 | MS.gene66864:intron | 25.0% |
| !! | TTGGAATTTAAGTACTCTTT+TGG | - | chr5.3:35603851-35603870 | None:intergenic | 25.0% |
| !!! | AACAAAGTGTTTTCAAATAG+AGG | + | chr5.3:35601712-35601731 | MS.gene66864:intron | 25.0% |
| !!! | ACACTTTTAAGAAGTACATT+AGG | - | chr5.3:35601553-35601572 | None:intergenic | 25.0% |
| !!! | ATTATAAAGGCATTGAATAG+AGG | + | chr5.3:35602244-35602263 | MS.gene66864:CDS | 25.0% |
| !!! | CACTTTTAAGAAGTACATTA+GGG | - | chr5.3:35601552-35601571 | None:intergenic | 25.0% |
| !!! | CTTCAAAACTGCTTTAAAAA+GGG | - | chr5.3:35602641-35602660 | None:intergenic | 25.0% |
| !!! | TCTTCAAAACTGCTTTAAAA+AGG | - | chr5.3:35602642-35602661 | None:intergenic | 25.0% |
| !!! | TGAAAAAGGCAAGTTTTTTT+AGG | + | chr5.3:35601975-35601994 | MS.gene66864:intron | 25.0% |
| !!! | TGATACGTAAACTTAGTTTT+TGG | - | chr5.3:35605251-35605270 | None:intergenic | 25.0% |
| !!! | TTTCTAGAGTACATTTGTTA+AGG | + | chr5.3:35605140-35605159 | MS.gene66864:intron | 25.0% |
| AAACTGAACTGAACAATGAA+TGG | + | chr5.3:35602805-35602824 | MS.gene66864:intron | 30.0% | |
| AACAAATTTCTCTTCTGCTT+TGG | + | chr5.3:35602713-35602732 | MS.gene66864:intron | 30.0% | |
| AACTTGTAGAGACATAAAAG+TGG | + | chr5.3:35603573-35603592 | MS.gene66864:intron | 30.0% | |
| AAGAGTTATTATGACTGGAT+AGG | - | chr5.3:35603407-35603426 | None:intergenic | 30.0% | |
| AAGTTAATATGAATGGAAGG+TGG | + | chr5.3:35601866-35601885 | MS.gene66864:intron | 30.0% | |
| AATAGTTTAAGGAAAAGTGG+AGG | - | chr5.3:35604471-35604490 | None:intergenic | 30.0% | |
| AGAGTTATTATGACTGGATA+GGG | - | chr5.3:35603406-35603425 | None:intergenic | 30.0% | |
| AGCTTACATGTGAATTTATG+AGG | + | chr5.3:35605538-35605557 | MS.gene66864:intron | 30.0% | |
| AGTTAATATGAATGGAAGGT+GGG | + | chr5.3:35601867-35601886 | MS.gene66864:intron | 30.0% | |
| ATCGAATGTTTAGATCCAAT+GGG | + | chr5.3:35604676-35604695 | MS.gene66864:CDS | 30.0% | |
| ATTACCTTAGATCTAATAGG+AGG | - | chr5.3:35601115-35601134 | None:intergenic | 30.0% | |
| ATTCAATCCTAAAGAGAAGT+TGG | + | chr5.3:35604758-35604777 | MS.gene66864:CDS | 30.0% | |
| ATTCATGCTGAAAAACCTAA+GGG | + | chr5.3:35604323-35604342 | MS.gene66864:CDS | 30.0% | |
| CAATCACTGAACTAAAACAA+GGG | + | chr5.3:35605754-35605773 | MS.gene66864:CDS | 30.0% | |
| GAAGAAAACAAAGACAATAG+AGG | + | chr5.3:35605599-35605618 | MS.gene66864:CDS | 30.0% | |
| GGATTGAATACCTCATTATT+TGG | - | chr5.3:35604747-35604766 | None:intergenic | 30.0% | |
| GTTAAAATATATGTGGGAGA+TGG | + | chr5.3:35604880-35604899 | MS.gene66864:CDS | 30.0% | |
| GTTCTATCAAAGACCATATT+TGG | - | chr5.3:35602539-35602558 | None:intergenic | 30.0% | |
| GTTGCTGAAATCAAAATCAA+AGG | + | chr5.3:35603895-35603914 | MS.gene66864:CDS | 30.0% | |
| TATTCATGCTGAAAAACCTA+AGG | + | chr5.3:35604322-35604341 | MS.gene66864:CDS | 30.0% | |
| TCTTCAAGAGTTATTATGAC+TGG | - | chr5.3:35603412-35603431 | None:intergenic | 30.0% | |
| TGGTCTTTGATAGAACATTA+TGG | + | chr5.3:35602543-35602562 | MS.gene66864:intron | 30.0% | |
| TTACCTTAGATCTAATAGGA+GGG | - | chr5.3:35601114-35601133 | None:intergenic | 30.0% | |
| TTCAAAACAGTGTTCTCAAT+CGG | - | chr5.3:35601802-35601821 | None:intergenic | 30.0% | |
| TTCAAATTTCACTTCACTAC+AGG | - | chr5.3:35601648-35601667 | None:intergenic | 30.0% | |
| TTCACAAAGGAAAAACAGTT+CGG | - | chr5.3:35602955-35602974 | None:intergenic | 30.0% | |
| ! | GAATTTAAGTACTCTTTTGG+AGG | - | chr5.3:35603848-35603867 | None:intergenic | 30.0% |
| ! | GATCTTGTGTTTTCTTTGAT+TGG | + | chr5.3:35601932-35601951 | MS.gene66864:intron | 30.0% |
| ! | TTTTATAGAGGTCAATGAGT+TGG | + | chr5.3:35602511-35602530 | MS.gene66864:intron | 30.0% |
| ! | TTTTCGATTGTAAAGTGGAA+CGG | - | chr5.3:35605787-35605806 | None:intergenic | 30.0% |
| !! | TATTGCGCAATAACTGATTT+TGG | + | chr5.3:35603014-35603033 | MS.gene66864:intron | 30.0% |
| !! | TGATTCAATGGTTTGACTTT+TGG | + | chr5.3:35601164-35601183 | MS.gene66864:intron | 30.0% |
| !! | TTTTTGAGGATATATCCCAA+GGG | + | chr5.3:35604546-35604565 | MS.gene66864:CDS | 30.0% |
| !!! | AATTAGTTTTCTGTGTATCG+TGG | - | chr5.3:35601686-35601705 | None:intergenic | 30.0% |
| !!! | ATGTTCTTGTTTTACATGGA+AGG | + | chr5.3:35602314-35602333 | MS.gene66864:CDS | 30.0% |
| !!! | CAATTTGGTTTTGTTCAGTT+CGG | - | chr5.3:35603075-35603094 | None:intergenic | 30.0% |
| !!! | CTCAGGTTCACAATTTTTTT+TGG | + | chr5.3:35603682-35603701 | MS.gene66864:intron | 30.0% |
| !!! | GATGATGTTCTTGTTTTACA+TGG | + | chr5.3:35602310-35602329 | MS.gene66864:CDS | 30.0% |
| !!! | TCTTTGTTTTCAAACAGAAC+TGG | + | chr5.3:35602872-35602891 | MS.gene66864:intron | 30.0% |
| AAAAAGATTACTGGCACAGT+AGG | - | chr5.3:35603229-35603248 | None:intergenic | 35.0% | |
| AAAACCTAAGGGTAGTTTGA+AGG | + | chr5.3:35604334-35604353 | MS.gene66864:CDS | 35.0% | |
| AAATATATGTGGGAGATGGA+TGG | + | chr5.3:35604884-35604903 | MS.gene66864:CDS | 35.0% | |
| AACAAGAACATCATCTTTGG+TGG | - | chr5.3:35602305-35602324 | None:intergenic | 35.0% | |
| AACAGAACCGTTAAACTGAA+TGG | - | chr5.3:35603186-35603205 | None:intergenic | 35.0% | |
| AACATCATCTTTGGTGGAAT+TGG | - | chr5.3:35602299-35602318 | None:intergenic | 35.0% | |
| AATGGTTGCATTCAATATGC+AGG | + | chr5.3:35604626-35604645 | MS.gene66864:intron | 35.0% | |
| ACAGTTTAAACCACTTCCTT+TGG | + | chr5.3:35605401-35605420 | MS.gene66864:intron | 35.0% | |
| ACATCATCTTTGGTGGAATT+GGG | - | chr5.3:35602298-35602317 | None:intergenic | 35.0% | |
| ACTACCATGAACTTCTACTT+AGG | - | chr5.3:35601348-35601367 | None:intergenic | 35.0% | |
| AGACTGTTTGAAAGAGCTTT+CGG | - | chr5.3:35604121-35604140 | None:intergenic | 35.0% | |
| AGGATTCATCATAACCAATC+GGG | + | chr5.3:35605304-35605323 | MS.gene66864:intron | 35.0% | |
| AGGATTCTGATGAAGATGAA+TGG | + | chr5.3:35603915-35603934 | MS.gene66864:CDS | 35.0% | |
| ATCCTATACTTCAGTTCTTC+AGG | - | chr5.3:35603809-35603828 | None:intergenic | 35.0% | |
| ATGGTTGCATTCAATATGCA+GGG | + | chr5.3:35604627-35604646 | MS.gene66864:intron | 35.0% | |
| CAAAGACAATAGAGGATAAC+TGG | + | chr5.3:35605607-35605626 | MS.gene66864:CDS | 35.0% | |
| CACGAGTGACATTTCAAAAA+AGG | + | chr5.3:35601834-35601853 | MS.gene66864:intron | 35.0% | |
| CAGGATTCATCATAACCAAT+CGG | + | chr5.3:35605303-35605322 | MS.gene66864:intron | 35.0% | |
| CATCGAATGTTTAGATCCAA+TGG | + | chr5.3:35604675-35604694 | MS.gene66864:CDS | 35.0% | |
| CCAATCACTGAACTAAAACA+AGG | + | chr5.3:35605753-35605772 | MS.gene66864:CDS | 35.0% | |
| CCAGACTTTCTTATGAATGT+AGG | + | chr5.3:35604720-35604739 | MS.gene66864:CDS | 35.0% | |
| CCTACATTCATAAGAAAGTC+TGG | - | chr5.3:35604723-35604742 | None:intergenic | 35.0% | |
| CGTATCAAAATCGAGTTAAC+AGG | + | chr5.3:35605264-35605283 | MS.gene66864:intron | 35.0% | |
| CTGATCAACACATTGCAAAA+TGG | + | chr5.3:35602351-35602370 | MS.gene66864:intron | 35.0% | |
| CTGCTCAGGTAATTTCTTAT+AGG | + | chr5.3:35603461-35603480 | MS.gene66864:CDS | 35.0% | |
| GAATGTAGGTCCAAATAATG+AGG | + | chr5.3:35604734-35604753 | MS.gene66864:CDS | 35.0% | |
| GAGTTGTTGAGCTTGATATT+TGG | + | chr5.3:35602272-35602291 | MS.gene66864:CDS | 35.0% | |
| GATTCTGATGAAGATGAATG+GGG | + | chr5.3:35603917-35603936 | MS.gene66864:CDS | 35.0% | |
| GGATTCTGATGAAGATGAAT+GGG | + | chr5.3:35603916-35603935 | MS.gene66864:CDS | 35.0% | |
| GTTCAATTCAGTCCATGAAT+TGG | - | chr5.3:35603103-35603122 | None:intergenic | 35.0% | |
| GTTCCACTTTACAATCGAAA+AGG | + | chr5.3:35605786-35605805 | MS.gene66864:CDS | 35.0% | |
| TACATGTGAATTTATGAGGC+AGG | + | chr5.3:35605542-35605561 | MS.gene66864:intron | 35.0% | |
| TCAAAACAGTGTTCTCAATC+GGG | - | chr5.3:35601801-35601820 | None:intergenic | 35.0% | |
| TCGAATGTTTAGATCCAATG+GGG | + | chr5.3:35604677-35604696 | MS.gene66864:CDS | 35.0% | |
| TCTTCAAAACTATCTTCACC+TGG | - | chr5.3:35601906-35601925 | None:intergenic | 35.0% | |
| TCTTCCTAAGTAGAAGTTCA+TGG | + | chr5.3:35601341-35601360 | MS.gene66864:intron | 35.0% | |
| TTCACTTCCAACTTCTCTTT+AGG | - | chr5.3:35604768-35604787 | None:intergenic | 35.0% | |
| TTCTTCATTGTTACATCAGC+TGG | - | chr5.3:35605585-35605604 | None:intergenic | 35.0% | |
| TTGAAGAAGATAAAGTGAGC+CGG | + | chr5.3:35604369-35604388 | MS.gene66864:intron | 35.0% | |
| TTTATAGTAGTGCAACGTAG+CGG | + | chr5.3:35601745-35601764 | MS.gene66864:intron | 35.0% | |
| ! | AAAAGGTGCAAGATTCACAA+AGG | - | chr5.3:35602968-35602987 | None:intergenic | 35.0% |
| ! | AATTTCCCTTTTTGTCCCTT+CGG | + | chr5.3:35602383-35602402 | MS.gene66864:intron | 35.0% |
| ! | AGAATTCTCTCTCACACTTT+TGG | - | chr5.3:35603870-35603889 | None:intergenic | 35.0% |
| ! | ATCTCATTTTGAATCCCGAT+TGG | - | chr5.3:35605321-35605340 | None:intergenic | 35.0% |
| ! | ATGTCATTGTCCTTGCTATA+AGG | + | chr5.3:35601516-35601535 | MS.gene66864:intron | 35.0% |
| ! | CAATGAGTTGGATCCAAATA+TGG | + | chr5.3:35602523-35602542 | MS.gene66864:intron | 35.0% |
| ! | TATGTTTCTGTCTCAAGTGT+TGG | + | chr5.3:35601201-35601220 | MS.gene66864:intron | 35.0% |
| ! | TCACCCAGAAAAACTTTTTG+AGG | + | chr5.3:35604532-35604551 | MS.gene66864:intron | 35.0% |
| ! | TCTCCTTTTCGATTGTAAAG+TGG | - | chr5.3:35605792-35605811 | None:intergenic | 35.0% |
| ! | TGTTCTAATTCAGGTTCATC+AGG | + | chr5.3:35602126-35602145 | MS.gene66864:intron | 35.0% |
| !! | CTATTTCTGTAATCGTCCAA+AGG | - | chr5.3:35605420-35605439 | None:intergenic | 35.0% |
| !! | CTTTTTGAGGATATATCCCA+AGG | + | chr5.3:35604545-35604564 | MS.gene66864:CDS | 35.0% |
| !! | GTCTCAAGTGTTGGATTAAT+TGG | + | chr5.3:35601235-35601254 | MS.gene66864:intron | 35.0% |
| !! | GTTTTAGCGAACAGTTTTAG+TGG | - | chr5.3:35602789-35602808 | None:intergenic | 35.0% |
| !!! | CCTTGTTTTAGTTCAGTGAT+TGG | - | chr5.3:35605756-35605775 | None:intergenic | 35.0% |
| AATTGATACACAGAAGGTGG+TGG | + | chr5.3:35600991-35601010 | MS.gene66864:CDS | 40.0% | |
| ACTCTAAGCAAAGCAAGTTC+AGG | - | chr5.3:35605675-35605694 | None:intergenic | 40.0% | |
| AGCAAAGAACCGAACTATGA+CGG | - | chr5.3:35603155-35603174 | None:intergenic | 40.0% | |
| AGGATAACTGGATACCTACT+TGG | + | chr5.3:35605619-35605638 | MS.gene66864:CDS | 40.0% | |
| AGGGATATGGCAGAAATCTT+TGG | + | chr5.3:35604646-35604665 | MS.gene66864:intron | 40.0% | |
| ATGGAAGTGGTATATGGGTT+TGG | + | chr5.3:35602840-35602859 | MS.gene66864:intron | 40.0% | |
| CAAAACAGTGTTCTCAATCG+GGG | - | chr5.3:35601800-35601819 | None:intergenic | 40.0% | |
| CAAATTGTGACGCCAATTCA+TGG | + | chr5.3:35603088-35603107 | MS.gene66864:intron | 40.0% | |
| CAACCCTCCTATTAGATCTA+AGG | + | chr5.3:35601108-35601127 | MS.gene66864:CDS | 40.0% | |
| CACCTGAAGAACTGAAGTAT+AGG | + | chr5.3:35603804-35603823 | MS.gene66864:CDS | 40.0% | |
| CATGAATTGGCGTCACAATT+TGG | - | chr5.3:35603090-35603109 | None:intergenic | 40.0% | |
| CCAGAATGGAAGTGGTATAT+GGG | + | chr5.3:35602835-35602854 | MS.gene66864:intron | 40.0% | |
| CGAATGTTTAGATCCAATGG+GGG | + | chr5.3:35604678-35604697 | MS.gene66864:CDS | 40.0% | |
| CGATACAGAGAAGATTAGCA+TGG | + | chr5.3:35602427-35602446 | MS.gene66864:intron | 40.0% | |
| CGGTACACAAAGATACAGTT+CGG | - | chr5.3:35602935-35602954 | None:intergenic | 40.0% | |
| CGTAATTGTCCGTCATAGTT+CGG | + | chr5.3:35603143-35603162 | MS.gene66864:intron | 40.0% | |
| CTTACCCTGGCATAAAAATC+TGG | - | chr5.3:35604952-35604971 | None:intergenic | 40.0% | |
| GAACTTCTACTTAGGAAGAG+TGG | - | chr5.3:35601340-35601359 | None:intergenic | 40.0% | |
| GCATTCAATATGCAGGGATA+TGG | + | chr5.3:35604633-35604652 | MS.gene66864:intron | 40.0% | |
| GGAAGTGAAGAAGACTCTTA+AGG | + | chr5.3:35604779-35604798 | MS.gene66864:CDS | 40.0% | |
| GGATAACTGGATACCTACTT+GGG | + | chr5.3:35605620-35605639 | MS.gene66864:CDS | 40.0% | |
| GGATGGAATTGATACACAGA+AGG | + | chr5.3:35600985-35601004 | MS.gene66864:CDS | 40.0% | |
| GGTTGAATTCAGCAGAGAAA+AGG | - | chr5.3:35601093-35601112 | None:intergenic | 40.0% | |
| GTATCCTCTTCGAGAACTAA+AGG | + | chr5.3:35603537-35603556 | MS.gene66864:CDS | 40.0% | |
| GTGAATTCTTCTTCCCAAGT+AGG | - | chr5.3:35605636-35605655 | None:intergenic | 40.0% | |
| TACTTCAGTTCTTCAGGTGA+CGG | - | chr5.3:35603803-35603822 | None:intergenic | 40.0% | |
| TAGTTCGGTTCTTTGCTTTG+CGG | + | chr5.3:35603158-35603177 | MS.gene66864:intron | 40.0% | |
| TCCAGAATGGAAGTGGTATA+TGG | + | chr5.3:35602834-35602853 | MS.gene66864:intron | 40.0% | |
| TCGGGGACATCTGATAAAAT+TGG | + | chr5.3:35602402-35602421 | MS.gene66864:intron | 40.0% | |
| TGAACTTGTCCAGTTCGAAA+AGG | - | chr5.3:35602985-35603004 | None:intergenic | 40.0% | |
| TGAAGAAGACTCTTAAGGTG+AGG | + | chr5.3:35604784-35604803 | MS.gene66864:intron | 40.0% | |
| TGAATGGTATACGTCCAGAA+TGG | + | chr5.3:35602821-35602840 | MS.gene66864:intron | 40.0% | |
| TGATGAAGATGAATGGGGAA+AGG | + | chr5.3:35603922-35603941 | MS.gene66864:CDS | 40.0% | |
| TGGAATTGATACACAGAAGG+TGG | + | chr5.3:35600988-35601007 | MS.gene66864:CDS | 40.0% | |
| TGTCAATGTCCTACATTCAC+AGG | - | chr5.3:35603323-35603342 | None:intergenic | 40.0% | |
| TGTGAATTTATGAGGCAGGT+TGG | + | chr5.3:35605546-35605565 | MS.gene66864:intron | 40.0% | |
| TTCAGGCACAGTTAAAGGAA+AGG | - | chr5.3:35605658-35605677 | None:intergenic | 40.0% | |
| TTCGTAAACCGAACCATGAA+CGG | - | chr5.3:35602740-35602759 | None:intergenic | 40.0% | |
| TTTCGAACTGGACAAGTTCA+AGG | + | chr5.3:35602985-35603004 | MS.gene66864:intron | 40.0% | |
| ! | AATCTTGCACCTTTTCGAAC+TGG | + | chr5.3:35602973-35602992 | MS.gene66864:intron | 40.0% |
| ! | ATTTCCCTTTTTGTCCCTTC+GGG | + | chr5.3:35602384-35602403 | MS.gene66864:intron | 40.0% |
| ! | ATTTTATCAGATGTCCCCGA+AGG | - | chr5.3:35602402-35602421 | None:intergenic | 40.0% |
| ! | CTGAAAGGTGTAAATCACTC+AGG | + | chr5.3:35603665-35603684 | MS.gene66864:intron | 40.0% |
| ! | GAGTTGATTTCCAGTGAGAT+AGG | - | chr5.3:35602200-35602219 | None:intergenic | 40.0% |
| ! | TCCACCAGATTTTTATGCCA+GGG | + | chr5.3:35604945-35604964 | MS.gene66864:CDS | 40.0% |
| ! | TGAACTTGCTTTGCTTAGAG+TGG | + | chr5.3:35605674-35605693 | MS.gene66864:CDS | 40.0% |
| ! | TTGTGTTGACCTGTGAATGT+AGG | + | chr5.3:35603311-35603330 | MS.gene66864:intron | 40.0% |
| ! | TTTTATCAGATGTCCCCGAA+GGG | - | chr5.3:35602401-35602420 | None:intergenic | 40.0% |
| !! | TCTGAGACAGATGATTTTGC+AGG | + | chr5.3:35605717-35605736 | MS.gene66864:CDS | 40.0% |
| ACCCTGGCATAAAAATCTGG+TGG | - | chr5.3:35604949-35604968 | None:intergenic | 45.0% | |
| AGCGAACGCATGTTCCTTAA+TGG | - | chr5.3:35603377-35603396 | None:intergenic | 45.0% | |
| ATAAACCTCCAGAGCTGTTC+CGG | - | chr5.3:35600932-35600951 | None:intergenic | 45.0% | |
| CCCATATACCACTTCCATTC+TGG | - | chr5.3:35602838-35602857 | None:intergenic | 45.0% | |
| CTGTAATCGTCCAAAGGAAG+TGG | - | chr5.3:35605414-35605433 | None:intergenic | 45.0% | |
| GACACGCACAAATCGAGAAA+TGG | + | chr5.3:35602465-35602484 | MS.gene66864:intron | 45.0% | |
| GCAAGTTCAGGCACAGTTAA+AGG | - | chr5.3:35605663-35605682 | None:intergenic | 45.0% | |
| GCTTCCTTCAAACTACCCTT+AGG | - | chr5.3:35604341-35604360 | None:intergenic | 45.0% | |
| GGTCATAACTCCTATCTCAC+TGG | + | chr5.3:35602187-35602206 | MS.gene66864:CDS | 45.0% | |
| GTATACGTCCAGAATGGAAG+TGG | + | chr5.3:35602827-35602846 | MS.gene66864:intron | 45.0% | |
| GTTGACCCAATCAACTGAGT+CGG | + | chr5.3:35601396-35601415 | MS.gene66864:intron | 45.0% | |
| TGCGGCTCCATTCAGTTTAA+CGG | + | chr5.3:35603176-35603195 | MS.gene66864:intron | 45.0% | |
| TTTAGATCCAATGGGGGATG+TGG | + | chr5.3:35604684-35604703 | MS.gene66864:CDS | 45.0% | |
| ! | AAGCCTTATCCCACTAAGTG+GGG | - | chr5.3:35602592-35602611 | None:intergenic | 45.0% |
| ! | AGCATGTGTTGACCATTGAC+CGG | + | chr5.3:35601610-35601629 | MS.gene66864:intron | 45.0% |
| ! | AGCTTTTGCTTGAAGGTCTG+AGG | - | chr5.3:35603443-35603462 | None:intergenic | 45.0% |
| ! | CAAGCCTTATCCCACTAAGT+GGG | - | chr5.3:35602593-35602612 | None:intergenic | 45.0% |
| ! | CCAAACCGACTCAGTTGATT+GGG | - | chr5.3:35601404-35601423 | None:intergenic | 45.0% |
| ! | CTCCACCAGATTTTTATGCC+AGG | + | chr5.3:35604944-35604963 | MS.gene66864:CDS | 45.0% |
| ! | CTTGAAGGTCTGAGGTAAGA+TGG | - | chr5.3:35603435-35603454 | None:intergenic | 45.0% |
| ! | TTTCCCTTTTTGTCCCTTCG+GGG | + | chr5.3:35602385-35602404 | MS.gene66864:intron | 45.0% |
| !! | GAAGCACTGAGGGTTTGTTT+AGG | - | chr5.3:35605511-35605530 | None:intergenic | 45.0% |
| !! | GAGAGAGGTTGATGATGAGA+AGG | + | chr5.3:35600964-35600983 | MS.gene66864:CDS | 45.0% |
| !! | GAGGTTGATGATGAGAAGGA+TGG | + | chr5.3:35600968-35600987 | MS.gene66864:CDS | 45.0% |
| !! | GGTATATGGGTTTGGTGCAT+TGG | + | chr5.3:35602848-35602867 | MS.gene66864:intron | 45.0% |
| !! | GTTCATGGTTCGGTTTACGA+AGG | + | chr5.3:35602739-35602758 | MS.gene66864:intron | 45.0% |
| !!! | ATTATTTTTTTATTTTATAG+AGG | + | chr5.3:35602499-35602518 | MS.gene66864:intron | 5.0% |
| AGGACTCATCACTGTGAGTC+AGG | + | chr5.3:35605284-35605303 | MS.gene66864:intron | 50.0% | |
| ATGTCCCCGAAGGGACAAAA+AGG | - | chr5.3:35602392-35602411 | None:intergenic | 50.0% | |
| CACATAACCACATCCCCCAT+TGG | - | chr5.3:35604694-35604713 | None:intergenic | 50.0% | |
| CCACTTAGTGGGATAAGGCT+TGG | + | chr5.3:35602591-35602610 | MS.gene66864:intron | 50.0% | |
| CCCAATCAACTGAGTCGGTT+TGG | + | chr5.3:35601401-35601420 | MS.gene66864:intron | 50.0% | |
| CCTTCAAGCAAAAGCTGCTC+AGG | + | chr5.3:35603447-35603466 | MS.gene66864:CDS | 50.0% | |
| CTTATCCCACTAAGTGGGGT+CGG | - | chr5.3:35602588-35602607 | None:intergenic | 50.0% | |
| GTGGGATTGAACAATGCACC+AGG | + | chr5.3:35601885-35601904 | MS.gene66864:intron | 50.0% | |
| TATCGTGGAGGTTCAGAGAG+AGG | + | chr5.3:35600949-35600968 | MS.gene66864:CDS | 50.0% | |
| TCCTCGACGTCCTTATAGCA+AGG | - | chr5.3:35601529-35601548 | None:intergenic | 50.0% | |
| TCGAACTACAAGCCACTGGT+TGG | + | chr5.3:35604585-35604604 | MS.gene66864:CDS | 50.0% | |
| TGTCCCCGAAGGGACAAAAA+GGG | - | chr5.3:35602391-35602410 | None:intergenic | 50.0% | |
| TGTGGGAGATGGATGGAGTA+TGG | + | chr5.3:35604891-35604910 | MS.gene66864:CDS | 50.0% | |
| TGTTGACCATTGACCGGTAG+TGG | + | chr5.3:35601616-35601635 | MS.gene66864:intron | 50.0% | |
| TTGGGTCAACGTCTCAGACA+AGG | - | chr5.3:35601386-35601405 | None:intergenic | 50.0% | |
| ! | CCAAGCCTTATCCCACTAAG+TGG | - | chr5.3:35602594-35602613 | None:intergenic | 50.0% |
| ! | CCTGAGCAGCTTTTGCTTGA+AGG | - | chr5.3:35603450-35603469 | None:intergenic | 50.0% |
| ! | CTTCTGCTTTGGACCGTTCA+TGG | + | chr5.3:35602724-35602743 | MS.gene66864:intron | 50.0% |
| ! | GCCAAACCGACTCAGTTGAT+TGG | - | chr5.3:35601405-35601424 | None:intergenic | 50.0% |
| ! | GCTTTGGACCGTTCATGGTT+CGG | + | chr5.3:35602729-35602748 | MS.gene66864:intron | 50.0% |
| ! | TCCTTGCTATAAGGACGTCG+AGG | + | chr5.3:35601525-35601544 | MS.gene66864:intron | 50.0% |
| ! | TGATACACAGAAGGTGGTGG+AGG | + | chr5.3:35600994-35601013 | MS.gene66864:CDS | 50.0% |
| !! | ACAGCTCTGGAGGTTTATCG+TGG | + | chr5.3:35600934-35600953 | MS.gene66864:CDS | 50.0% |
| !! | AGCTAAGGCAAGAAGCACTG+AGG | - | chr5.3:35605522-35605541 | None:intergenic | 50.0% |
| !! | CACGCCTTTAGTTCTCGAAG+AGG | - | chr5.3:35603544-35603563 | None:intergenic | 50.0% |
| !! | CTGGATGCTTGGTGCTCAAA+TGG | + | chr5.3:35604608-35604627 | MS.gene66864:intron | 50.0% |
| !! | GCTAAGGCAAGAAGCACTGA+GGG | - | chr5.3:35605521-35605540 | None:intergenic | 50.0% |
| ACTAAGTGGGGTCGGCTACA+GGG | - | chr5.3:35602580-35602599 | None:intergenic | 55.0% | |
| CCTAGTGTCAGCTCAGTAGC+CGG | - | chr5.3:35604391-35604410 | None:intergenic | 55.0% | |
| CGACCCCACTTAGTGGGATA+AGG | + | chr5.3:35602586-35602605 | MS.gene66864:intron | 55.0% | |
| CTACAGCCACTACCGGTCAA+TGG | - | chr5.3:35601625-35601644 | None:intergenic | 55.0% | |
| CTACAGGCTACAGCCACTAC+CGG | - | chr5.3:35601632-35601651 | None:intergenic | 55.0% | |
| CTCGTCGAACTACAAGCCAC+TGG | + | chr5.3:35604581-35604600 | MS.gene66864:CDS | 55.0% | |
| GAGGTGACACGTGTACCCTT+GGG | - | chr5.3:35604564-35604583 | None:intergenic | 55.0% | |
| TGTAGCCGACCCCACTTAGT+GGG | + | chr5.3:35602580-35602599 | MS.gene66864:intron | 55.0% | |
| ! | ACTACAAGCCACTGGTTGGC+TGG | + | chr5.3:35604589-35604608 | MS.gene66864:CDS | 55.0% |
| ! | ATGAGGCAGGTTGGCATAGC+TGG | + | chr5.3:35605555-35605574 | MS.gene66864:intron | 55.0% |
| ! | CAGTGGCTTGTAGTTCGACG+AGG | - | chr5.3:35604583-35604602 | None:intergenic | 55.0% |
| !! | GCTCTGGAGGTTTATCGTGG+AGG | + | chr5.3:35600937-35600956 | MS.gene66864:CDS | 55.0% |
| !! | TGGAGGAAGTGCTGCAGAAG+CGG | + | chr5.3:35601011-35601030 | MS.gene66864:CDS | 55.0% |
| ATTAGCATGGCCCCTGCGCA+AGG | + | chr5.3:35602440-35602459 | MS.gene66864:intron | 60.0% | |
| CACTAAGTGGGGTCGGCTAC+AGG | - | chr5.3:35602581-35602600 | None:intergenic | 60.0% | |
| CCAAGCATCCAGCCAACCAG+TGG | - | chr5.3:35604600-35604619 | None:intergenic | 60.0% | |
| CCGGCTACTGAGCTGACACT+AGG | + | chr5.3:35604388-35604407 | MS.gene66864:intron | 60.0% | |
| CGAGGTGACACGTGTACCCT+TGG | - | chr5.3:35604565-35604584 | None:intergenic | 60.0% | |
| CTGTAGCCGACCCCACTTAG+TGG | + | chr5.3:35602579-35602598 | MS.gene66864:intron | 60.0% | |
| GTGCGTGTCATCCTTGCGCA+GGG | - | chr5.3:35602454-35602473 | None:intergenic | 60.0% | |
| TGCGTGTCATCCTTGCGCAG+GGG | - | chr5.3:35602453-35602472 | None:intergenic | 60.0% | |
| TGTGCGTGTCATCCTTGCGC+AGG | - | chr5.3:35602455-35602474 | None:intergenic | 60.0% | |
| ! | CCACTGGTTGGCTGGATGCT+TGG | + | chr5.3:35604597-35604616 | MS.gene66864:intron | 60.0% |
| ! | TGACTCCGGAACAGCTCTGG+AGG | + | chr5.3:35600924-35600943 | MS.gene66864:CDS | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.3 | gene | 35600923 | 35605814 | 35600923 | ID=MS.gene66864 |
| chr5.3 | mRNA | 35600923 | 35605814 | 35600923 | ID=MS.gene66864.t1;Parent=MS.gene66864 |
| chr5.3 | exon | 35600923 | 35601129 | 35600923 | ID=MS.gene66864.t1.exon1;Parent=MS.gene66864.t1 |
| chr5.3 | CDS | 35600923 | 35601129 | 35600923 | ID=cds.MS.gene66864.t1;Parent=MS.gene66864.t1 |
| chr5.3 | exon | 35602139 | 35602335 | 35602139 | ID=MS.gene66864.t1.exon2;Parent=MS.gene66864.t1 |
| chr5.3 | CDS | 35602139 | 35602335 | 35602139 | ID=cds.MS.gene66864.t1;Parent=MS.gene66864.t1 |
| chr5.3 | exon | 35603333 | 35603565 | 35603333 | ID=MS.gene66864.t1.exon3;Parent=MS.gene66864.t1 |
| chr5.3 | CDS | 35603333 | 35603565 | 35603333 | ID=cds.MS.gene66864.t1;Parent=MS.gene66864.t1 |
| chr5.3 | exon | 35603759 | 35603985 | 35603759 | ID=MS.gene66864.t1.exon4;Parent=MS.gene66864.t1 |
| chr5.3 | CDS | 35603759 | 35603985 | 35603759 | ID=cds.MS.gene66864.t1;Parent=MS.gene66864.t1 |
| chr5.3 | exon | 35604221 | 35604382 | 35604221 | ID=MS.gene66864.t1.exon5;Parent=MS.gene66864.t1 |
| chr5.3 | CDS | 35604221 | 35604382 | 35604221 | ID=cds.MS.gene66864.t1;Parent=MS.gene66864.t1 |
| chr5.3 | exon | 35604540 | 35604613 | 35604540 | ID=MS.gene66864.t1.exon6;Parent=MS.gene66864.t1 |
| chr5.3 | CDS | 35604540 | 35604613 | 35604540 | ID=cds.MS.gene66864.t1;Parent=MS.gene66864.t1 |
| chr5.3 | exon | 35604659 | 35604800 | 35604659 | ID=MS.gene66864.t1.exon7;Parent=MS.gene66864.t1 |
| chr5.3 | CDS | 35604659 | 35604800 | 35604659 | ID=cds.MS.gene66864.t1;Parent=MS.gene66864.t1 |
| chr5.3 | exon | 35604880 | 35604966 | 35604880 | ID=MS.gene66864.t1.exon8;Parent=MS.gene66864.t1 |
| chr5.3 | CDS | 35604880 | 35604966 | 35604880 | ID=cds.MS.gene66864.t1;Parent=MS.gene66864.t1 |
| chr5.3 | exon | 35605564 | 35605814 | 35605564 | ID=MS.gene66864.t1.exon9;Parent=MS.gene66864.t1 |
| chr5.3 | CDS | 35605564 | 35605814 | 35605564 | ID=cds.MS.gene66864.t1;Parent=MS.gene66864.t1 |
| Gene Sequence |
| Protein sequence |
