AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene67268

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67268.t1 MTR_5g073480 90.476 336 32 0 1 336 214 549 0.0 622
MS.gene67268.t1 MTR_5g073460 69.753 324 97 1 1 323 213 536 2.63e-158 459
MS.gene67268.t1 MTR_5g073450 67.241 290 92 2 39 328 194 480 2.94e-136 401
MS.gene67268.t1 MTR_3g031130 57.877 292 117 3 39 327 184 472 3.73e-104 318
MS.gene67268.t1 MTR_5g073620 52.000 325 135 2 1 323 242 547 9.14e-102 322
MS.gene67268.t1 MTR_5g073770 52.500 200 93 1 27 224 181 380 3.94e-66 213
MS.gene67268.t1 MTR_5g074130 41.975 324 169 7 2 321 209 517 3.90e-65 219
MS.gene67268.t1 MTR_5g073900 43.396 265 122 7 64 323 1 242 1.40e-51 174
MS.gene67268.t1 MTR_5g073820 36.503 326 113 5 1 323 194 428 1.01e-50 175
MS.gene67268.t1 MTR_3g464010 37.612 335 182 9 1 323 196 515 7.98e-50 176
MS.gene67268.t1 MTR_8g021330 32.653 294 183 3 46 328 161 450 6.47e-49 173
MS.gene67268.t1 MTR_5g073920 35.474 327 176 8 1 321 210 507 3.28e-48 172
MS.gene67268.t1 MTR_4g103540 32.646 291 189 4 34 321 237 523 4.17e-45 164
MS.gene67268.t1 MTR_5g073960 45.205 219 95 6 12 225 220 418 1.14e-44 158
MS.gene67268.t1 MTR_6g033310 32.143 308 190 4 33 321 259 566 1.41e-44 162
MS.gene67268.t1 MTR_1g090620 32.967 273 171 1 49 321 208 468 2.60e-44 161
MS.gene67268.t1 MTR_1g057560 31.387 274 176 1 49 322 202 463 1.46e-41 153
MS.gene67268.t1 MTR_7g026630 32.292 288 178 4 48 323 212 494 2.70e-39 147
MS.gene67268.t1 MTR_3g025900 29.316 307 197 4 51 340 178 481 6.02e-37 140
MS.gene67268.t1 MTR_7g013770 27.667 300 198 3 43 323 215 514 1.41e-36 139
MS.gene67268.t1 MTR_4g062330 29.927 274 169 4 9 259 111 384 6.03e-36 137
MS.gene67268.t1 MTR_2g096230 25.606 289 193 4 61 335 172 452 9.72e-35 134
MS.gene67268.t1 MTR_5g093530 38.211 246 137 4 78 321 205 437 1.61e-34 133
MS.gene67268.t1 MTR_5g073650 33.043 230 111 3 1 230 129 315 5.69e-34 127
MS.gene67268.t1 MTR_5g073810 33.043 230 111 3 1 230 231 417 6.31e-32 124
MS.gene67268.t1 MTR_1g067480 25.795 283 196 4 46 317 166 445 5.04e-28 115
MS.gene67268.t1 MTR_1g117090 26.518 313 194 3 45 321 197 509 6.14e-28 115
MS.gene67268.t1 MTR_1g067460 26.638 229 166 2 46 273 164 391 1.06e-25 108
MS.gene67268.t1 MTR_5g073470 42.697 89 51 0 15 103 170 258 2.57e-16 78.2
MS.gene67268.t1 MTR_5g073610 35.537 121 61 2 2 122 214 317 2.81e-15 76.3
MS.gene67268.t1 MTR_4g019260 46.552 58 31 0 126 183 10 67 8.49e-12 60.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene67268.t1 AT5G58430 62.759 290 96 2 39 328 189 466 2.05e-123 368
MS.gene67268.t1 AT1G07000 48.630 292 136 3 39 328 171 450 2.03e-84 267
MS.gene67268.t1 AT5G03540 33.808 281 173 2 49 328 87 355 3.01e-47 167
MS.gene67268.t1 AT5G03540 33.808 281 173 2 49 328 202 470 1.27e-46 167
MS.gene67268.t1 AT5G03540 33.808 281 173 2 49 328 228 496 1.44e-46 167
MS.gene67268.t1 AT1G72470 32.281 285 181 3 46 321 178 459 3.08e-46 166
MS.gene67268.t1 AT5G13150 33.564 289 175 3 52 328 210 493 5.67e-42 154
MS.gene67268.t1 AT1G54090 31.228 285 182 3 46 321 170 449 5.97e-42 154
MS.gene67268.t1 AT5G50380 31.250 272 179 3 50 321 240 503 6.49e-42 155
MS.gene67268.t1 AT5G52340 31.868 273 174 1 49 321 202 462 1.85e-39 147
MS.gene67268.t1 AT3G14090 28.169 284 193 3 52 328 179 458 1.94e-39 147
MS.gene67268.t1 AT5G13990 32.509 283 184 3 40 321 247 523 9.19e-38 143
MS.gene67268.t1 AT1G07725 28.873 284 187 6 61 335 184 461 2.48e-34 133
MS.gene67268.t1 AT5G59730 29.054 296 199 6 51 335 164 459 1.69e-33 130
MS.gene67268.t1 AT5G59730 29.054 296 199 6 51 335 164 459 2.67e-33 130
MS.gene67268.t1 AT3G29400 25.839 298 200 4 43 321 194 489 1.22e-30 122
MS.gene67268.t1 AT2G28640 25.532 282 202 3 47 321 150 430 4.72e-30 120
MS.gene67268.t1 AT3G55150 27.586 290 199 5 53 333 183 470 1.30e-29 119
MS.gene67268.t1 AT5G52350 27.356 329 211 7 5 321 104 416 4.35e-29 118
MS.gene67268.t1 AT2G39380 26.619 278 190 3 54 321 183 456 7.18e-29 117
MS.gene67268.t1 AT3G09520 30.870 230 147 5 39 259 155 381 1.92e-28 116
MS.gene67268.t1 AT2G28650 26.217 267 182 3 61 321 156 413 4.97e-28 114
MS.gene67268.t1 AT5G61010 27.055 292 200 5 57 340 215 501 5.63e-28 115
MS.gene67268.t1 AT5G61010 27.055 292 200 5 57 340 215 501 5.63e-28 115
MS.gene67268.t1 AT3G09530 29.208 202 140 1 61 259 174 375 2.96e-25 107

Find 78 sgRNAs with CRISPR-Local

Find 91 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GAAGAGTTTGAAGAAGATTA+TGG 0.149961 5.1:+56733154 MS.gene67268:CDS
AGTAGGGTCCTCGTAGATTT+TGG 0.216151 5.1:-56733290 None:intergenic
GAATCTTATCGAAATGCTTT+TGG 0.241253 5.1:+56732394 MS.gene67268:CDS
AGTGAAGATGGGTTTGATTA+TGG 0.242259 5.1:+56733237 MS.gene67268:CDS
GAATACCTTACTGATGATTC+TGG 0.252690 5.1:+56732428 MS.gene67268:CDS
CCGGGAACTGCTGCCTTTGC+CGG 0.270644 5.1:-56733055 None:intergenic
CTGCTGCCTTTGCCGGATCT+TGG 0.293183 5.1:-56733048 None:intergenic
AAAACAAAGCAACAATAATT+TGG 0.310490 5.1:+56732969 MS.gene67268:CDS
AACAATAATTTGGAAGAGAT+TGG 0.315163 5.1:+56732979 MS.gene67268:CDS
GGAGCTATTAGAGAGCATTT+TGG 0.326513 5.1:+56733258 MS.gene67268:CDS
TTCATCACGTAATGGGTAAT+CGG 0.341028 5.1:-56733091 None:intergenic
GTAGAAAGCTTATCAAGATT+AGG 0.355489 5.1:+56732599 MS.gene67268:CDS
TAGAAAGCTTATCAAGATTA+GGG 0.361927 5.1:+56732600 MS.gene67268:CDS
TTTGCCGATGCTATTGCTAA+TGG 0.362177 5.1:+56732836 MS.gene67268:CDS
AAGAGTTTGAAGAAGATTAT+GGG 0.371295 5.1:+56733155 MS.gene67268:CDS
CCGGCAAAGGCAGCAGTTCC+CGG 0.375453 5.1:+56733055 MS.gene67268:CDS
ACAATAATTTGGAAGAGATT+GGG 0.378487 5.1:+56732980 MS.gene67268:CDS
AAAAGCATTTCGATAAGATT+CGG 0.401943 5.1:-56732392 None:intergenic
TCGATGTGTATATCAGTTGC+CGG 0.430233 5.1:+56732564 MS.gene67268:CDS
TAAACAACCGCTCAGGTGAT+TGG 0.444208 5.1:-56732862 None:intergenic
TGAACGGAAACTTTGTGATC+GGG 0.445015 5.1:+56732736 MS.gene67268:CDS
AAGGTAGTTCATCACGTAAT+GGG 0.450242 5.1:-56733098 None:intergenic
GAATTTGATTCGCCAAGATC+CGG 0.457372 5.1:+56733036 MS.gene67268:CDS
AAGGCTTTGATCATGAAGTC+AGG 0.463257 5.1:-56732467 None:intergenic
TTCCTCTCTATCAGTGAAGA+TGG 0.465906 5.1:+56733225 MS.gene67268:CDS
AGCCTTGCCAACTGAAACAA+TGG 0.468338 5.1:+56732484 MS.gene67268:CDS
CTTCACTGATAGAGAGGAAG+TGG 0.479915 5.1:-56733221 None:intergenic
GTCCATTGTTTCAGTTGGCA+AGG 0.483309 5.1:-56732486 None:intergenic
GGAAAACATAGCACTGAAGT+AGG 0.485132 5.1:-56733307 None:intergenic
CAGCAGGTACAGTGTTCAAA+AGG 0.485488 5.1:+56733340 MS.gene67268:CDS
TTGAAGAAGAGATTGAAAGA+TGG 0.488391 5.1:+56732672 MS.gene67268:CDS
AAGGCAGCAGTTCCCGGTGT+TGG 0.489580 5.1:+56733061 MS.gene67268:CDS
ATCACAAAGTTTCCGTTCAG+TGG 0.495687 5.1:-56732732 None:intergenic
CTGAACGGAAACTTTGTGAT+CGG 0.497291 5.1:+56732735 MS.gene67268:CDS
GAAGGTAGTTCATCACGTAA+TGG 0.502602 5.1:-56733099 None:intergenic
TTGTCAGTCACGGATGGTGC+TGG 0.503030 5.1:+56733129 MS.gene67268:CDS
TGTACCTGCTGTAATTCATC+AGG 0.503183 5.1:-56733328 None:intergenic
TCATCACGTAATGGGTAATC+GGG 0.513379 5.1:-56733090 None:intergenic
CAATAATTTGGAAGAGATTG+GGG 0.514909 5.1:+56732981 MS.gene67268:CDS
GCGAAGTTGATGCTTAGTGC+AGG 0.523874 5.1:+56732524 MS.gene67268:CDS
ATGCCGTCCATTGTTTCAGT+TGG 0.529072 5.1:-56732491 None:intergenic
TCCTCTCTATCAGTGAAGAT+GGG 0.529089 5.1:+56733226 MS.gene67268:CDS
AGATTATGGGTATCCATTGA+AGG 0.533173 5.1:+56733168 MS.gene67268:CDS
TAAATCCAGAATCATCAGTA+AGG 0.536753 5.1:-56732433 None:intergenic
CGAAGTTGATGCTTAGTGCA+GGG 0.561213 5.1:+56732525 MS.gene67268:CDS
AGATATTATTTCCCACTGAA+CGG 0.563648 5.1:+56732720 MS.gene67268:CDS
TCACAAAGTTTCCGTTCAGT+GGG 0.570711 5.1:-56732731 None:intergenic
CGTTCAGATGTTGTCATGGA+AGG 0.571479 5.1:+56732646 MS.gene67268:CDS
GCTTAGTGCAGGGTTTGAGA+AGG 0.574744 5.1:+56732535 MS.gene67268:CDS
ACCCATCTTCACTGATAGAG+AGG 0.584934 5.1:-56733227 None:intergenic
TTCACTGCAAACATCGGTGA+AGG 0.589746 5.1:-56732792 None:intergenic
GAAAACATAGCACTGAAGTA+GGG 0.592856 5.1:-56733306 None:intergenic
GATTCGCCAAGATCCGGCAA+AGG 0.594644 5.1:+56733042 MS.gene67268:CDS
TGCTGATTGTCAGTCACGGA+TGG 0.600899 5.1:+56733123 MS.gene67268:CDS
ATGACTCTAAACAACCGCTC+AGG 0.601313 5.1:-56732869 None:intergenic
GCTTCCATTAGCAATAGCAT+CGG 0.612479 5.1:-56732840 None:intergenic
AAAATTCAGCAGCTGAAGTG+TGG 0.615509 5.1:-56732816 None:intergenic
GTGACTGACAATCAGCATGA+AGG 0.619865 5.1:-56733117 None:intergenic
AAGACGTTCAGATGTTGTCA+TGG 0.622352 5.1:+56732642 MS.gene67268:CDS
TTCATGCTGATTGTCAGTCA+CGG 0.623312 5.1:+56733119 MS.gene67268:CDS
ACAGCTTAGTAATTATGTGA+AGG 0.625126 5.1:+56732352 MS.gene67268:CDS
AGGCTTTGATCATGAAGTCA+GGG 0.627623 5.1:-56732466 None:intergenic
GAAGGATAAATCAGCAGTGG+AGG 0.628489 5.1:-56732774 None:intergenic
TCAGTCACGGATGGTGCTGG+AGG 0.634051 5.1:+56733132 MS.gene67268:CDS
AATCGGGTGAAGTCCAACAC+CGG 0.638930 5.1:-56733074 None:intergenic
TGTGTATATCAGTTGCCGGA+GGG 0.639321 5.1:+56732568 MS.gene67268:CDS
ATCGGGTGAAGTCCAACACC+GGG 0.640586 5.1:-56733073 None:intergenic
TGTGGATTCACTGCAAACAT+CGG 0.649928 5.1:-56732798 None:intergenic
ATGTGTATATCAGTTGCCGG+AGG 0.651060 5.1:+56732567 MS.gene67268:CDS
GGTGAAGGATAAATCAGCAG+TGG 0.657111 5.1:-56732777 None:intergenic
AATAATTTGGAAGAGATTGG+GGG 0.661534 5.1:+56732982 MS.gene67268:CDS
TTGCCAACTGAAACAATGGA+CGG 0.672416 5.1:+56732488 MS.gene67268:CDS
TAATATCTTCAAAGCCACGT+TGG 0.677514 5.1:-56732705 None:intergenic
TGTTTCATGATCAATACAGT+CGG 0.690144 5.1:+56732939 MS.gene67268:CDS
ACTGTATTGATCATGAAACA+CGG 0.712454 5.1:-56732936 None:intergenic
ATGGAAGCCAATCACCTGAG+CGG 0.734633 5.1:+56732855 MS.gene67268:CDS
AGCCAAATCCAAAATCTACG+AGG 0.755525 5.1:+56733282 MS.gene67268:CDS
ATGGATTAAAACTTCCAACG+TGG 0.757658 5.1:+56732691 MS.gene67268:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAAACAAAGCAACAATAATT+TGG + chr5.1:56732969-56732988 MS.gene67268:CDS 20.0%
! AACAATAATTTGGAAGAGAT+TGG + chr5.1:56732979-56732998 MS.gene67268:CDS 25.0%
! AAGAGTTTGAAGAAGATTAT+GGG + chr5.1:56733155-56733174 MS.gene67268:CDS 25.0%
! ACAATAATTTGGAAGAGATT+GGG + chr5.1:56732980-56732999 MS.gene67268:CDS 25.0%
! TAGAAAGCTTATCAAGATTA+GGG + chr5.1:56732600-56732619 MS.gene67268:CDS 25.0%
!!! AAAAGCATTTCGATAAGATT+CGG - chr5.1:56732395-56732414 None:intergenic 25.0%
!!! ATTTTTGGATATTCCTTCAA+TGG - chr5.1:56733184-56733203 None:intergenic 25.0%
AATAATTTGGAAGAGATTGG+GGG + chr5.1:56732982-56733001 MS.gene67268:CDS 30.0%
ACAGCTTAGTAATTATGTGA+AGG + chr5.1:56732352-56732371 MS.gene67268:CDS 30.0%
AGATATTATTTCCCACTGAA+CGG + chr5.1:56732720-56732739 MS.gene67268:CDS 30.0%
CAATAATTTGGAAGAGATTG+GGG + chr5.1:56732981-56733000 MS.gene67268:CDS 30.0%
GAAGAGTTTGAAGAAGATTA+TGG + chr5.1:56733154-56733173 MS.gene67268:CDS 30.0%
GAAGGAATATCCAAAAATTG+AGG + chr5.1:56733186-56733205 MS.gene67268:CDS 30.0%
GTAGAAAGCTTATCAAGATT+AGG + chr5.1:56732599-56732618 MS.gene67268:CDS 30.0%
TAAATCCAGAATCATCAGTA+AGG - chr5.1:56732436-56732455 None:intergenic 30.0%
TGTTTCATGATCAATACAGT+CGG + chr5.1:56732939-56732958 MS.gene67268:CDS 30.0%
TTGAAGAAGAGATTGAAAGA+TGG + chr5.1:56732672-56732691 MS.gene67268:CDS 30.0%
! ACTGTATTGATCATGAAACA+CGG - chr5.1:56732939-56732958 None:intergenic 30.0%
! GAATCTTATCGAAATGCTTT+TGG + chr5.1:56732394-56732413 MS.gene67268:CDS 30.0%
!!! TTTGTGATCGGGTTTTATTT+GGG + chr5.1:56732747-56732766 MS.gene67268:CDS 30.0%
AAGGTAGTTCATCACGTAAT+GGG - chr5.1:56733101-56733120 None:intergenic 35.0%
AGATTATGGGTATCCATTGA+AGG + chr5.1:56733168-56733187 MS.gene67268:CDS 35.0%
GAATACCTTACTGATGATTC+TGG + chr5.1:56732428-56732447 MS.gene67268:CDS 35.0%
TAATATCTTCAAAGCCACGT+TGG - chr5.1:56732708-56732727 None:intergenic 35.0%
TTTCTACCAAAAATTCCCTC+CGG - chr5.1:56732586-56732605 None:intergenic 35.0%
! AGTGAAGATGGGTTTGATTA+TGG + chr5.1:56733237-56733256 MS.gene67268:CDS 35.0%
! ATGGATTAAAACTTCCAACG+TGG + chr5.1:56732691-56732710 MS.gene67268:CDS 35.0%
! GAAAACATAGCACTGAAGTA+GGG - chr5.1:56733309-56733328 None:intergenic 35.0%
! TGCACTCTATCCTCAATTTT+TGG - chr5.1:56733199-56733218 None:intergenic 35.0%
! TTTTCCTGATGAATTACAGC+AGG + chr5.1:56733324-56733343 MS.gene67268:CDS 35.0%
!! TTCATCACGTAATGGGTAAT+CGG - chr5.1:56733094-56733113 None:intergenic 35.0%
!!! CTTTGTGATCGGGTTTTATT+TGG + chr5.1:56732746-56732765 MS.gene67268:CDS 35.0%
AAAATTCAGCAGCTGAAGTG+TGG - chr5.1:56732819-56732838 None:intergenic 40.0%
AAGACGTTCAGATGTTGTCA+TGG + chr5.1:56732642-56732661 MS.gene67268:CDS 40.0%
AGCCAAATCCAAAATCTACG+AGG + chr5.1:56733282-56733301 MS.gene67268:CDS 40.0%
ATCACAAAGTTTCCGTTCAG+TGG - chr5.1:56732735-56732754 None:intergenic 40.0%
CTGAACGGAAACTTTGTGAT+CGG + chr5.1:56732735-56732754 MS.gene67268:CDS 40.0%
GAAGGTAGTTCATCACGTAA+TGG - chr5.1:56733102-56733121 None:intergenic 40.0%
GCTTCCATTAGCAATAGCAT+CGG - chr5.1:56732843-56732862 None:intergenic 40.0%
TCACAAAGTTTCCGTTCAGT+GGG - chr5.1:56732734-56732753 None:intergenic 40.0%
TCCTCTCTATCAGTGAAGAT+GGG + chr5.1:56733226-56733245 MS.gene67268:CDS 40.0%
TCGATGTGTATATCAGTTGC+CGG + chr5.1:56732564-56732583 MS.gene67268:CDS 40.0%
TGAACGGAAACTTTGTGATC+GGG + chr5.1:56732736-56732755 MS.gene67268:CDS 40.0%
TGTACCTGCTGTAATTCATC+AGG - chr5.1:56733331-56733350 None:intergenic 40.0%
TGTGGATTCACTGCAAACAT+CGG - chr5.1:56732801-56732820 None:intergenic 40.0%
TTCCTCTCTATCAGTGAAGA+TGG + chr5.1:56733225-56733244 MS.gene67268:CDS 40.0%
TTGCCAACTGAAACAATGGA+CGG + chr5.1:56732488-56732507 MS.gene67268:CDS 40.0%
TTTGCCGATGCTATTGCTAA+TGG + chr5.1:56732836-56732855 MS.gene67268:CDS 40.0%
! AAGGCTTTGATCATGAAGTC+AGG - chr5.1:56732470-56732489 None:intergenic 40.0%
! AGGCTTTGATCATGAAGTCA+GGG - chr5.1:56732469-56732488 None:intergenic 40.0%
! GAATTTGATTCGCCAAGATC+CGG + chr5.1:56733036-56733055 MS.gene67268:CDS 40.0%
! GGAAAACATAGCACTGAAGT+AGG - chr5.1:56733310-56733329 None:intergenic 40.0%
! GTCCTCGTAGATTTTGGATT+TGG - chr5.1:56733287-56733306 None:intergenic 40.0%
! TTCATGCTGATTGTCAGTCA+CGG + chr5.1:56733119-56733138 MS.gene67268:CDS 40.0%
!! TCATCACGTAATGGGTAATC+GGG - chr5.1:56733093-56733112 None:intergenic 40.0%
!!! GGAGCTATTAGAGAGCATTT+TGG + chr5.1:56733258-56733277 MS.gene67268:CDS 40.0%
ACCCATCTTCACTGATAGAG+AGG - chr5.1:56733230-56733249 None:intergenic 45.0%
AGCCTTGCCAACTGAAACAA+TGG + chr5.1:56732484-56732503 MS.gene67268:CDS 45.0%
ATGACTCTAAACAACCGCTC+AGG - chr5.1:56732872-56732891 None:intergenic 45.0%
ATGCCGTCCATTGTTTCAGT+TGG - chr5.1:56732494-56732513 None:intergenic 45.0%
ATGTGTATATCAGTTGCCGG+AGG + chr5.1:56732567-56732586 MS.gene67268:CDS 45.0%
CAGCAGGTACAGTGTTCAAA+AGG + chr5.1:56733340-56733359 MS.gene67268:CDS 45.0%
CGTTCAGATGTTGTCATGGA+AGG + chr5.1:56732646-56732665 MS.gene67268:CDS 45.0%
CTTCACTGATAGAGAGGAAG+TGG - chr5.1:56733224-56733243 None:intergenic 45.0%
GAAGGATAAATCAGCAGTGG+AGG - chr5.1:56732777-56732796 None:intergenic 45.0%
GGTGAAGGATAAATCAGCAG+TGG - chr5.1:56732780-56732799 None:intergenic 45.0%
GTCCATTGTTTCAGTTGGCA+AGG - chr5.1:56732489-56732508 None:intergenic 45.0%
GTGACTGACAATCAGCATGA+AGG - chr5.1:56733120-56733139 None:intergenic 45.0%
TAAACAACCGCTCAGGTGAT+TGG - chr5.1:56732865-56732884 None:intergenic 45.0%
TGTGTATATCAGTTGCCGGA+GGG + chr5.1:56732568-56732587 MS.gene67268:CDS 45.0%
TTCACTGCAAACATCGGTGA+AGG - chr5.1:56732795-56732814 None:intergenic 45.0%
! AGTAGGGTCCTCGTAGATTT+TGG - chr5.1:56733293-56733312 None:intergenic 45.0%
!! CGAAGTTGATGCTTAGTGCA+GGG + chr5.1:56732525-56732544 MS.gene67268:CDS 45.0%
!!! AGCGATTGGAGGCATTTTCA+TGG + chr5.1:56733006-56733025 MS.gene67268:CDS 45.0%
!!! TGGAGGCATTTTCATGGAGT+TGG + chr5.1:56733012-56733031 MS.gene67268:CDS 45.0%
AAGAGATTGGGGGAAGCGAT+TGG + chr5.1:56732992-56733011 MS.gene67268:CDS 50.0%
AATCGGGTGAAGTCCAACAC+CGG - chr5.1:56733077-56733096 None:intergenic 50.0%
ATGGAAGCCAATCACCTGAG+CGG + chr5.1:56732855-56732874 MS.gene67268:CDS 50.0%
GCTTAGTGCAGGGTTTGAGA+AGG + chr5.1:56732535-56732554 MS.gene67268:CDS 50.0%
! CAGTTGCCGGAGGGAATTTT+TGG + chr5.1:56732577-56732596 MS.gene67268:CDS 50.0%
! TGCTGATTGTCAGTCACGGA+TGG + chr5.1:56733123-56733142 MS.gene67268:CDS 50.0%
!! GCGAAGTTGATGCTTAGTGC+AGG + chr5.1:56732524-56732543 MS.gene67268:CDS 50.0%
AGATTGGGGGAAGCGATTGG+AGG + chr5.1:56732995-56733014 MS.gene67268:CDS 55.0%
ATCGGGTGAAGTCCAACACC+GGG - chr5.1:56733076-56733095 None:intergenic 55.0%
GATTCGCCAAGATCCGGCAA+AGG + chr5.1:56733042-56733061 MS.gene67268:CDS 55.0%
TTGTCAGTCACGGATGGTGC+TGG + chr5.1:56733129-56733148 MS.gene67268:CDS 55.0%
AAGGCAGCAGTTCCCGGTGT+TGG + chr5.1:56733061-56733080 MS.gene67268:CDS 60.0%
CTGCTGCCTTTGCCGGATCT+TGG - chr5.1:56733051-56733070 None:intergenic 60.0%
! TCAGTCACGGATGGTGCTGG+AGG + chr5.1:56733132-56733151 MS.gene67268:CDS 60.0%
CCGGCAAAGGCAGCAGTTCC+CGG + chr5.1:56733055-56733074 MS.gene67268:CDS 65.0%
CCGGGAACTGCTGCCTTTGC+CGG - chr5.1:56733058-56733077 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr5.1 gene 56732344 56733366 56732344 ID=MS.gene67268
chr5.1 mRNA 56732344 56733366 56732344 ID=MS.gene67268.t1;Parent=MS.gene67268
chr5.1 exon 56732344 56733366 56732344 ID=MS.gene67268.t1.exon1;Parent=MS.gene67268.t1
chr5.1 CDS 56732344 56733366 56732344 ID=cds.MS.gene67268.t1;Parent=MS.gene67268.t1
Gene Sequence

>MS.gene67268

ATGGTGGAACAGCTTAGTAATTATGTGAAGGCGCTTCAGCAAGAAAATCCGAATCTTATCGAAATGCTTTTGGAGAAGTTGAAAGAATACCTTACTGATGATTCTGGATTTAATGTTTCTGACCCTGACTTCATGATCAAAGCCTTGCCAACTGAAACAATGGACGGCATTCACAAAACAGCGAAGTTGATGCTTAGTGCAGGGTTTGAGAAGGACTTCTTCGATGTGTATATCAGTTGCCGGAGGGAATTTTTGGTAGAAAGCTTATCAAGATTAGGGCTCAAGAAACTCAACACTGAAGACGTTCAGATGTTGTCATGGAAGGAACTTGAAGAAGAGATTGAAAGATGGATTAAAACTTCCAACGTGGCTTTGAAGATATTATTTCCCACTGAACGGAAACTTTGTGATCGGGTTTTATTTGGGTTCTCCTCCACTGCTGATTTATCCTTCACCGATGTTTGCAGTGAATCCACACTTCAGCTGCTGAATTTTGCCGATGCTATTGCTAATGGAAGCCAATCACCTGAGCGGTTGTTTAGAGTCATTGACATGTTTGAAACATTGTGTGATCTAATTCGAGAGTTTAAGTCCGTGTTTCATGATCAATACAGTCGGTCGCTGCAAAACAAAGCAACAATAATTTGGAAGAGATTGGGGGAAGCGATTGGAGGCATTTTCATGGAGTTGGCGAATTTGATTCGCCAAGATCCGGCAAAGGCAGCAGTTCCCGGTGTTGGACTTCACCCGATTACCCATTACGTGATGAACTACCTTCATGCTGATTGTCAGTCACGGATGGTGCTGGAGGAAGAGTTTGAAGAAGATTATGGGTATCCATTGAAGGAATATCCAAAAATTGAGGATAGAGTGCATTCCACTTCCTCTCTATCAGTGAAGATGGGTTTGATTATGGAGCTATTAGAGAGCATTTTGGAAGCCAAATCCAAAATCTACGAGGACCCTACTTCAGTGCTATGTTTTCCTGATGAATTACAGCAGGTACAGTGTTCAAAAGGCTGA
Protein sequence

>MS.gene67268.t1

MVEQLSNYVKALQQENPNLIEMLLEKLKEYLTDDSGFNVSDPDFMIKALPTETMDGIHKTAKLMLSAGFEKDFFDVYISCRREFLVESLSRLGLKKLNTEDVQMLSWKELEEEIERWIKTSNVALKILFPTERKLCDRVLFGFSSTADLSFTDVCSESTLQLLNFADAIANGSQSPERLFRVIDMFETLCDLIREFKSVFHDQYSRSLQNKATIIWKRLGEAIGGIFMELANLIRQDPAKAAVPGVGLHPITHYVMNYLHADCQSRMVLEEEFEEDYGYPLKEYPKIEDRVHSTSSLSVKMGLIMELLESILEAKSKIYEDPTSVLCFPDELQQVQCSKG