Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67457.t1 | XP_024640978.1 | 97.4 | 537 | 14 | 0 | 1 | 537 | 1 | 537 | 6.60E-297 | 1029.2 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67457.t1 | F4I9E1 | 30.9 | 537 | 340 | 13 | 13 | 528 | 43 | 569 | 3.7e-62 | 240.7 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67457.t1 | G7JXI0 | 97.4 | 537 | 14 | 0 | 1 | 537 | 1 | 537 | 4.8e-297 | 1029.2 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051996 | MS.gene67457 | 0.810083 | 1.37E-50 | -1.69E-46 |
| MS.gene052211 | MS.gene67457 | 0.801989 | 6.94E-49 | -1.69E-46 |
| MS.gene05234 | MS.gene67457 | 0.804386 | 2.21E-49 | -1.69E-46 |
| MS.gene053406 | MS.gene67457 | 0.80111 | 1.05E-48 | -1.69E-46 |
| MS.gene055202 | MS.gene67457 | 0.806084 | 9.76E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67457.t1 | MTR_5g022380 | 97.393 | 537 | 14 | 0 | 1 | 537 | 1 | 537 | 0.0 | 1070 |
| MS.gene67457.t1 | MTR_5g022380 | 97.424 | 427 | 11 | 0 | 111 | 537 | 1 | 427 | 0.0 | 850 |
| MS.gene67457.t1 | MTR_4g073690 | 63.498 | 526 | 182 | 4 | 11 | 526 | 13 | 538 | 0.0 | 670 |
| MS.gene67457.t1 | MTR_4g073690 | 60.995 | 382 | 139 | 4 | 11 | 382 | 13 | 394 | 6.13e-160 | 461 |
| MS.gene67457.t1 | MTR_2g450710 | 36.563 | 547 | 309 | 6 | 14 | 525 | 13 | 556 | 1.37e-111 | 343 |
| MS.gene67457.t1 | MTR_4g116210 | 34.720 | 553 | 318 | 7 | 14 | 525 | 12 | 562 | 1.31e-106 | 330 |
| MS.gene67457.t1 | MTR_7g029015 | 33.741 | 572 | 316 | 6 | 12 | 525 | 14 | 580 | 1.23e-105 | 328 |
| MS.gene67457.t1 | MTR_3g099150 | 35.305 | 558 | 313 | 12 | 7 | 525 | 9 | 557 | 7.09e-101 | 315 |
| MS.gene67457.t1 | MTR_5g090570 | 34.717 | 530 | 324 | 8 | 12 | 528 | 10 | 530 | 8.84e-97 | 304 |
| MS.gene67457.t1 | MTR_2g100400 | 31.760 | 551 | 329 | 10 | 8 | 528 | 2 | 535 | 2.39e-91 | 290 |
| MS.gene67457.t1 | MTR_1g059080 | 31.475 | 556 | 342 | 9 | 13 | 535 | 24 | 573 | 1.03e-87 | 282 |
| MS.gene67457.t1 | MTR_1g111540 | 32.413 | 543 | 333 | 9 | 8 | 522 | 21 | 557 | 3.47e-87 | 281 |
| MS.gene67457.t1 | MTR_1g111510 | 32.965 | 543 | 330 | 8 | 8 | 522 | 21 | 557 | 3.49e-87 | 281 |
| MS.gene67457.t1 | MTR_1g111550 | 33.752 | 557 | 323 | 11 | 13 | 536 | 25 | 568 | 6.78e-87 | 280 |
| MS.gene67457.t1 | MTR_1g111530 | 32.717 | 541 | 324 | 9 | 13 | 522 | 22 | 553 | 1.02e-86 | 279 |
| MS.gene67457.t1 | MTR_7g102880 | 30.896 | 547 | 335 | 7 | 13 | 522 | 29 | 569 | 6.89e-84 | 273 |
| MS.gene67457.t1 | MTR_1g050550 | 31.319 | 546 | 334 | 9 | 13 | 522 | 24 | 564 | 8.23e-84 | 272 |
| MS.gene67457.t1 | MTR_7g083660 | 31.922 | 567 | 337 | 16 | 11 | 536 | 5 | 563 | 3.16e-76 | 251 |
| MS.gene67457.t1 | MTR_5g026350 | 31.469 | 572 | 337 | 15 | 11 | 534 | 5 | 569 | 3.44e-74 | 246 |
| MS.gene67457.t1 | MTR_8g071920 | 30.998 | 571 | 343 | 13 | 11 | 535 | 46 | 611 | 1.17e-73 | 246 |
| MS.gene67457.t1 | MTR_3g466040 | 30.593 | 523 | 340 | 9 | 13 | 525 | 7 | 516 | 4.10e-65 | 220 |
| MS.gene67457.t1 | MTR_3g466110 | 30.103 | 485 | 323 | 7 | 13 | 491 | 7 | 481 | 2.09e-61 | 210 |
| MS.gene67457.t1 | MTR_2g104250 | 28.963 | 328 | 172 | 8 | 236 | 537 | 12 | 304 | 1.31e-39 | 146 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67457.t1 | AT4G34950 | 62.364 | 550 | 179 | 5 | 11 | 533 | 14 | 562 | 0.0 | 705 |
| MS.gene67457.t1 | AT2G16660 | 64.436 | 523 | 179 | 2 | 10 | 525 | 11 | 533 | 0.0 | 685 |
| MS.gene67457.t1 | AT2G16660 | 62.368 | 380 | 136 | 2 | 10 | 382 | 11 | 390 | 3.54e-163 | 469 |
| MS.gene67457.t1 | AT1G80530 | 34.783 | 552 | 328 | 9 | 1 | 525 | 1 | 547 | 1.64e-109 | 338 |
| MS.gene67457.t1 | AT5G14120 | 36.861 | 567 | 306 | 6 | 8 | 525 | 11 | 574 | 2.37e-109 | 338 |
| MS.gene67457.t1 | AT3G01930 | 35.813 | 578 | 304 | 7 | 7 | 525 | 10 | 579 | 2.67e-108 | 335 |
| MS.gene67457.t1 | AT5G50520 | 35.227 | 528 | 320 | 8 | 12 | 525 | 15 | 534 | 4.19e-105 | 326 |
| MS.gene67457.t1 | AT5G50630 | 35.227 | 528 | 320 | 8 | 12 | 525 | 15 | 534 | 4.19e-105 | 326 |
| MS.gene67457.t1 | AT2G28120 | 35.110 | 544 | 316 | 8 | 8 | 522 | 12 | 547 | 3.11e-102 | 319 |
| MS.gene67457.t1 | AT2G39210 | 35.240 | 542 | 313 | 10 | 13 | 522 | 21 | 556 | 6.37e-100 | 314 |
| MS.gene67457.t1 | AT1G74780 | 33.148 | 540 | 320 | 9 | 13 | 528 | 7 | 529 | 3.37e-91 | 289 |
| MS.gene67457.t1 | AT2G34350 | 32.721 | 544 | 324 | 8 | 8 | 530 | 2 | 524 | 5.94e-88 | 281 |
| MS.gene67457.t1 | AT2G34350 | 32.721 | 544 | 324 | 8 | 8 | 530 | 2 | 524 | 5.94e-88 | 281 |
| MS.gene67457.t1 | AT1G18940 | 31.667 | 540 | 311 | 9 | 13 | 524 | 9 | 518 | 1.16e-85 | 275 |
| MS.gene67457.t1 | AT2G34355 | 31.520 | 533 | 333 | 7 | 13 | 530 | 7 | 522 | 3.80e-81 | 263 |
| MS.gene67457.t1 | AT3G01930 | 35.021 | 474 | 241 | 7 | 111 | 525 | 1 | 466 | 2.98e-78 | 254 |
| MS.gene67457.t1 | AT3G01630 | 30.147 | 544 | 338 | 12 | 12 | 528 | 22 | 550 | 2.19e-74 | 246 |
| MS.gene67457.t1 | AT3G01630 | 30.147 | 544 | 338 | 12 | 12 | 528 | 40 | 568 | 4.33e-74 | 246 |
| MS.gene67457.t1 | AT1G31470 | 31.157 | 536 | 342 | 11 | 12 | 528 | 42 | 569 | 5.58e-70 | 235 |
| MS.gene67457.t1 | AT4G19450 | 31.393 | 567 | 333 | 15 | 11 | 528 | 5 | 564 | 4.41e-69 | 233 |
| MS.gene67457.t1 | AT3G01930 | 33.641 | 434 | 228 | 6 | 7 | 388 | 10 | 435 | 1.47e-68 | 227 |
| MS.gene67457.t1 | AT5G45275 | 30.442 | 565 | 339 | 14 | 11 | 528 | 5 | 562 | 9.74e-68 | 229 |
| MS.gene67457.t1 | AT2G30300 | 30.561 | 517 | 326 | 9 | 14 | 523 | 8 | 498 | 4.16e-65 | 220 |
| MS.gene67457.t1 | AT4G19450 | 31.731 | 416 | 233 | 12 | 11 | 382 | 5 | 413 | 1.70e-55 | 192 |
| MS.gene67457.t1 | AT2G34355 | 29.639 | 388 | 249 | 6 | 150 | 530 | 2 | 372 | 6.58e-48 | 171 |
Find 107 sgRNAs with CRISPR-Local
Find 200 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTCTTTGGACGCATTCTTTC+TGG | 0.067041 | 5.1:-13445657 | MS.gene67457:CDS |
| TCTTATGATTGGTGCTATTA+TGG | 0.122465 | 5.1:-13447210 | MS.gene67457:CDS |
| TCATTTCATTCATAAGTATT+TGG | 0.123881 | 5.1:-13445683 | MS.gene67457:CDS |
| ACTTCTTGTTCCTTTATATT+TGG | 0.160234 | 5.1:-13445994 | MS.gene67457:CDS |
| GAATATCCCCTCTTCCTTAT+TGG | 0.177151 | 5.1:-13447145 | MS.gene67457:CDS |
| CATGCTTGTGTATGTGATTA+TGG | 0.186967 | 5.1:-13444555 | MS.gene67457:CDS |
| CATTTCATTCATAAGTATTT+GGG | 0.219467 | 5.1:-13445682 | MS.gene67457:CDS |
| CCCTTTAGAATGCCGGAAAT+TGG | 0.239061 | 5.1:+13446329 | None:intergenic |
| ATGGCTTTCGCTTGTGTATT+GGG | 0.254616 | 5.1:-13444536 | MS.gene67457:CDS |
| ATAAGTATTTGGGGTTTCTT+TGG | 0.277285 | 5.1:-13445672 | MS.gene67457:CDS |
| AAAGATGTTGGTAAAGCTTT+TGG | 0.279837 | 5.1:-13447278 | MS.gene67457:CDS |
| ATTATGGGATTCATTGGTTA+TGG | 0.282873 | 5.1:-13447194 | MS.gene67457:CDS |
| CTTATGATTGGTGCTATTAT+GGG | 0.287517 | 5.1:-13447209 | MS.gene67457:CDS |
| TCTCAGATTCTGATGTTCTT+TGG | 0.295006 | 5.1:-13444848 | MS.gene67457:CDS |
| CTCATTCTTAACCTTCCTAT+TGG | 0.296648 | 5.1:-13444677 | MS.gene67457:CDS |
| CTATTTGGTCTCAAATACTA+TGG | 0.305461 | 5.1:-13444716 | MS.gene67457:CDS |
| GTTATGTTTACCAGCCAATA+AGG | 0.305623 | 5.1:+13447131 | None:intergenic |
| CAGGCATGCCAAGGTTAGTT+TGG | 0.310026 | 5.1:-13444880 | MS.gene67457:CDS |
| ATTAAACGAAAACCAGTTAT+AGG | 0.318415 | 5.1:-13445855 | MS.gene67457:CDS |
| CTCTTGGCATTTGATATCTC+TGG | 0.323684 | 5.1:-13446080 | MS.gene67457:CDS |
| GCAGCAGCTTCAGAACTATT+TGG | 0.325560 | 5.1:-13444731 | MS.gene67457:CDS |
| AAGGAAGAGGGGATATTCTT+TGG | 0.328395 | 5.1:+13447150 | None:intergenic |
| TTACCAGGATCACTATATAT+TGG | 0.329554 | 5.1:-13444803 | MS.gene67457:CDS |
| GTATGCTCTTCTCCTATAAC+TGG | 0.339891 | 5.1:+13445843 | None:intergenic |
| TATGGCTTTCGCTTGTGTAT+TGG | 0.340093 | 5.1:-13444537 | MS.gene67457:CDS |
| ATTTCTGTCTATATGTATCT+TGG | 0.344487 | 5.1:+13444466 | None:intergenic |
| TTTCTCTGTGGTGTTGGAAC+AGG | 0.349477 | 5.1:-13445771 | MS.gene67457:CDS |
| ACTTCAGTTATTCTTATGAT+TGG | 0.350491 | 5.1:-13447221 | MS.gene67457:CDS |
| CAAGAAGTGGCATAGCTAAT+AGG | 0.363471 | 5.1:+13446009 | None:intergenic |
| TATATTGGTTCAATCTTAGT+AGG | 0.367284 | 5.1:-13444788 | MS.gene67457:CDS |
| GATGTGTATATTCTTGTGTA+TGG | 0.373027 | 5.1:-13446426 | MS.gene67457:CDS |
| TCATAAACATGTTATTTCAT+TGG | 0.374079 | 5.1:-13446054 | MS.gene67457:CDS |
| TTGAATACGACCAAATATAA+AGG | 0.374709 | 5.1:+13445984 | None:intergenic |
| TGAACCTTTGTTGGCACAAA+AGG | 0.386700 | 5.1:-13445925 | MS.gene67457:CDS |
| GGTGCTATTATGGGATTCAT+TGG | 0.388521 | 5.1:-13447200 | MS.gene67457:CDS |
| GACAGTAGCTATTTATCTCT+TGG | 0.396797 | 5.1:-13446096 | MS.gene67457:CDS |
| TTGTTCTAAATGCAAGAAAC+AGG | 0.408668 | 5.1:+13444501 | None:intergenic |
| ATCTTAGTAGGAATATGTTA+TGG | 0.410113 | 5.1:-13444776 | MS.gene67457:CDS |
| TCCAATTTCCGGCATTCTAA+AGG | 0.410577 | 5.1:-13446330 | MS.gene67457:CDS |
| ACATATTGCTTGTACCCATA+TGG | 0.411307 | 5.1:+13447391 | None:intergenic |
| AGCATTAATAGAAACTTAGA+TGG | 0.417468 | 5.1:+13446245 | None:intergenic |
| CCAATTTCCGGCATTCTAAA+GGG | 0.419855 | 5.1:-13446329 | MS.gene67457:CDS |
| TTCAATATCATAAAGGTATC+CGG | 0.421548 | 5.1:+13444628 | None:intergenic |
| GTGTCATTTCTCTGTGGTGT+TGG | 0.422085 | 5.1:-13445777 | MS.gene67457:CDS |
| ACAGGTTCATGAACCTTTGT+TGG | 0.424667 | 5.1:-13445934 | MS.gene67457:CDS |
| GATGAATAACTTGGGACAAA+TGG | 0.427374 | 5.1:-13445739 | MS.gene67457:CDS |
| AGATGTGTTAAAGTCTCTAA+TGG | 0.430909 | 5.1:-13447339 | MS.gene67457:CDS |
| ATCATAAGAATAACTGAAGT+TGG | 0.438681 | 5.1:+13447224 | None:intergenic |
| GTGCAAGTGTTTCCGCCTCC+TGG | 0.444901 | 5.1:+13444593 | None:intergenic |
| TAGGATTTGTGACAGCCATA+TGG | 0.447435 | 5.1:-13447406 | MS.gene67457:CDS |
| CAGGTCTTGTTTCTGATCGT+TGG | 0.448059 | 5.1:-13447247 | MS.gene67457:CDS |
| GAAAAGATGAATGAACCAAT+AGG | 0.463266 | 5.1:+13444662 | None:intergenic |
| ATCCCCTCTTCCTTATTGGC+TGG | 0.463390 | 5.1:-13447141 | MS.gene67457:intron |
| ATGAATAACTTGGGACAAAT+GGG | 0.466370 | 5.1:-13445738 | MS.gene67457:CDS |
| TTCGCTTGTGTATTGGGGTG+TGG | 0.467433 | 5.1:-13444530 | MS.gene67457:CDS |
| AGAGCATACTATCATTGAAA+TGG | 0.467872 | 5.1:-13445829 | MS.gene67457:CDS |
| ACAAAAGGTTTCAGAAGTAA+AGG | 0.484351 | 5.1:-13445910 | MS.gene67457:CDS |
| TAGTGGCTTCAATATCATAA+AGG | 0.484536 | 5.1:+13444621 | None:intergenic |
| TGGTTACATTGCATTGGCAA+TGG | 0.486214 | 5.1:-13444828 | MS.gene67457:CDS |
| CACTCTCTGAATACTACATC+AGG | 0.489900 | 5.1:-13445632 | MS.gene67457:intron |
| GCATTGGCAATGGCCTTACC+AGG | 0.490266 | 5.1:-13444818 | MS.gene67457:CDS |
| GAACCAATATATAGTGATCC+TGG | 0.491333 | 5.1:+13444800 | None:intergenic |
| AATGAAATAACATGTTTATG+AGG | 0.496120 | 5.1:+13446056 | None:intergenic |
| GGAGGCGGAAACACTTGCAC+TGG | 0.501570 | 5.1:-13444590 | MS.gene67457:CDS |
| AATCTCAACTTCCTCTACCT+TGG | 0.507298 | 5.1:+13445875 | None:intergenic |
| TACATAGCCCTTTAGAATGC+CGG | 0.507305 | 5.1:+13446322 | None:intergenic |
| TCTTCTGTAGAAGTTGAAGC+TGG | 0.513323 | 5.1:+13446164 | None:intergenic |
| AGGATTTGTGACAGCCATAT+GGG | 0.515315 | 5.1:-13447405 | MS.gene67457:CDS |
| GGACAAATGGGACAGGCACT+TGG | 0.515436 | 5.1:-13445726 | MS.gene67457:CDS |
| TTGTGTATTGGGGTGTGGAT+TGG | 0.519733 | 5.1:-13444525 | MS.gene67457:CDS |
| CTCTCTGTTGCTAAAGATGT+TGG | 0.521493 | 5.1:-13447290 | MS.gene67457:CDS |
| GTTCTTTGGTTACATTGCAT+TGG | 0.523788 | 5.1:-13444834 | MS.gene67457:CDS |
| TCATTGGTTATGGAGCTCAA+TGG | 0.539555 | 5.1:-13447184 | MS.gene67457:CDS |
| AATATATAGTGATCCTGGTA+AGG | 0.541574 | 5.1:+13444805 | None:intergenic |
| ATGTGTATATTCTTGTGTAT+GGG | 0.545839 | 5.1:-13446425 | MS.gene67457:CDS |
| AGAGACATGTACCAAGGTAG+AGG | 0.555739 | 5.1:-13445886 | MS.gene67457:CDS |
| AATAGTTCTGAAGCTGCTGC+TGG | 0.557803 | 5.1:+13444734 | None:intergenic |
| AAATGAACAAAGAAACATCA+TGG | 0.557965 | 5.1:+13445700 | None:intergenic |
| GCAATGAGACAAATGATAGC+AGG | 0.561934 | 5.1:+13446212 | None:intergenic |
| CAATAGGAAGGTTAAGAATG+AGG | 0.565069 | 5.1:+13444678 | None:intergenic |
| ATTGAAGCCACTAGTGTACC+AGG | 0.566378 | 5.1:-13444611 | MS.gene67457:CDS |
| TCTGTAGAAGTTGAAGCTGG+TGG | 0.571451 | 5.1:+13446167 | None:intergenic |
| GCCACTAGTGTACCAGGAGG+CGG | 0.573885 | 5.1:-13444605 | MS.gene67457:CDS |
| TTTACCAGCCAATAAGGAAG+AGG | 0.577066 | 5.1:+13447137 | None:intergenic |
| GGCATTCTAAAGGGCTATGT+AGG | 0.579833 | 5.1:-13446320 | MS.gene67457:CDS |
| AAGCTGGTGGAGTTTCATGA+AGG | 0.580336 | 5.1:+13446180 | None:intergenic |
| TCCGCCTCCTGGTACACTAG+TGG | 0.580549 | 5.1:+13444604 | None:intergenic |
| ATTTCATTCATAAGTATTTG+GGG | 0.583874 | 5.1:-13445681 | MS.gene67457:CDS |
| AAATATAAAGGAACAAGAAG+TGG | 0.584319 | 5.1:+13445996 | None:intergenic |
| ATATGGGTACAAGCAATATG+TGG | 0.584975 | 5.1:-13447389 | MS.gene67457:CDS |
| GCTGCGTTCCAAACTAACCT+TGG | 0.585421 | 5.1:+13444872 | None:intergenic |
| TGGCTTTCGCTTGTGTATTG+GGG | 0.591806 | 5.1:-13444535 | MS.gene67457:CDS |
| TGTATATTCTTGTGTATGGG+TGG | 0.598397 | 5.1:-13446422 | MS.gene67457:CDS |
| TAACTTGGGACAAATGGGAC+AGG | 0.599118 | 5.1:-13445733 | MS.gene67457:CDS |
| TTACCAGCCAATAAGGAAGA+GGG | 0.606426 | 5.1:+13447138 | None:intergenic |
| TAGAAACTTAGATGGGTCTG+AGG | 0.614102 | 5.1:+13446253 | None:intergenic |
| GCAGAAAATCAGGCATGCCA+AGG | 0.615589 | 5.1:-13444889 | MS.gene67457:intron |
| AGATGAATGAACCAATAGGA+AGG | 0.629288 | 5.1:+13444666 | None:intergenic |
| TTGTTTGTGTCATTTCTCTG+TGG | 0.636758 | 5.1:-13445783 | MS.gene67457:CDS |
| GCATTAATAGAAACTTAGAT+GGG | 0.651110 | 5.1:+13446246 | None:intergenic |
| ACTATGTGTGATGAATAACT+TGG | 0.651334 | 5.1:-13445748 | MS.gene67457:CDS |
| AAAGGAAGAGACATGTACCA+AGG | 0.656240 | 5.1:-13445892 | MS.gene67457:CDS |
| TACCAGCCAATAAGGAAGAG+GGG | 0.660022 | 5.1:+13447139 | None:intergenic |
| CTATGTGTGATGAATAACTT+GGG | 0.685471 | 5.1:-13445747 | MS.gene67457:CDS |
| TGGGTGGAAACAGCACAACA+TGG | 0.685598 | 5.1:-13446406 | MS.gene67457:CDS |
| GAATGCCGGAAATTGGACCA+CGG | 0.691049 | 5.1:+13446336 | None:intergenic |
| GAAGCCACTAGTGTACCAGG+AGG | 0.777264 | 5.1:-13444608 | MS.gene67457:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | TTAATATAAACATAGTTTTA+AGG | - | chr5.1:13446336-13446355 | MS.gene67457:CDS | 10.0% |
| !! | ATAATATAAAGTGAAATTCT+TGG | + | chr5.1:13445284-13445303 | None:intergenic | 15.0% |
| !! | ATCAAATTAAACTCTAAATA+AGG | + | chr5.1:13444789-13444808 | None:intergenic | 15.0% |
| !! | CATATAAAATTAAACATTCA+AGG | + | chr5.1:13446979-13446998 | None:intergenic | 15.0% |
| !! | TTGATTATAAGTTTATAACT+AGG | - | chr5.1:13446904-13446923 | MS.gene67457:intron | 15.0% |
| !!! | ATAATCAAGATTTTAAAATG+TGG | + | chr5.1:13446892-13446911 | None:intergenic | 15.0% |
| !!! | CTTGAATGTTTAATTTTATA+TGG | - | chr5.1:13446977-13446996 | MS.gene67457:intron | 15.0% |
| !! | AATGAAATAACATGTTTATG+AGG | + | chr5.1:13445835-13445854 | None:intergenic | 20.0% |
| !! | ACCAATTTATTTGATTACTT+TGG | - | chr5.1:13445427-13445446 | MS.gene67457:intron | 20.0% |
| !! | ATTGATTATTTGCAATGTAA+AGG | - | chr5.1:13446443-13446462 | MS.gene67457:intron | 20.0% |
| !! | ATTTCATTCATAAGTATTTG+GGG | - | chr5.1:13446207-13446226 | MS.gene67457:CDS | 20.0% |
| !! | CATTTCATTCATAAGTATTT+GGG | - | chr5.1:13446206-13446225 | MS.gene67457:CDS | 20.0% |
| !! | GCTGTTATTAACATATAATT+AGG | - | chr5.1:13446672-13446691 | MS.gene67457:intron | 20.0% |
| !! | TATAAGTTTATAACTAGGAA+GGG | - | chr5.1:13446909-13446928 | MS.gene67457:intron | 20.0% |
| !! | TCATTTCATTCATAAGTATT+TGG | - | chr5.1:13446205-13446224 | MS.gene67457:CDS | 20.0% |
| !! | TCCAAAGTAATCAAATAAAT+TGG | + | chr5.1:13445431-13445450 | None:intergenic | 20.0% |
| !! | TTATAAGTTTATAACTAGGA+AGG | - | chr5.1:13446908-13446927 | MS.gene67457:intron | 20.0% |
| !!! | ATTAAGTTGTATATTTAGAC+AGG | - | chr5.1:13445369-13445388 | MS.gene67457:intron | 20.0% |
| !!! | ATTTGGTTAAGTTCTATTTT+TGG | - | chr5.1:13446844-13446863 | MS.gene67457:intron | 20.0% |
| !!! | TAAACATAGTTTTAAGGAAA+AGG | - | chr5.1:13446342-13446361 | MS.gene67457:CDS | 20.0% |
| !!! | TCATAAACATGTTATTTCAT+TGG | - | chr5.1:13445834-13445853 | MS.gene67457:CDS | 20.0% |
| !!! | TTAAGTTGTATATTTAGACA+GGG | - | chr5.1:13445370-13445389 | MS.gene67457:intron | 20.0% |
| !!! | TTTTTCTTCTTCTTTCTATT+TGG | - | chr5.1:13446827-13446846 | MS.gene67457:intron | 20.0% |
| ! | AAAAGATTGTGAAACTGTTT+GGG | - | chr5.1:13445194-13445213 | MS.gene67457:intron | 25.0% |
| ! | AAAATCTTAACTCATAGATC+AGG | + | chr5.1:13446377-13446396 | None:intergenic | 25.0% |
| ! | AAACAAGCCTAAAAATTATC+AGG | + | chr5.1:13445142-13445161 | None:intergenic | 25.0% |
| ! | AAATATAAAGGAACAAGAAG+TGG | + | chr5.1:13445895-13445914 | None:intergenic | 25.0% |
| ! | AAATCTTAACTCATAGATCA+GGG | + | chr5.1:13446376-13446395 | None:intergenic | 25.0% |
| ! | AAATGAACAAAGAAACATCA+TGG | + | chr5.1:13446191-13446210 | None:intergenic | 25.0% |
| ! | AACAAGCCTAAAAATTATCA+GGG | + | chr5.1:13445141-13445160 | None:intergenic | 25.0% |
| ! | ACTTCAGTTATTCTTATGAT+TGG | - | chr5.1:13444667-13444686 | MS.gene67457:CDS | 25.0% |
| ! | ACTTCTTGTTCCTTTATATT+TGG | - | chr5.1:13445894-13445913 | MS.gene67457:CDS | 25.0% |
| ! | AGATCAAATAGTCATGTATA+TGG | + | chr5.1:13446315-13446334 | None:intergenic | 25.0% |
| ! | AGCATTAATAGAAACTTAGA+TGG | + | chr5.1:13445646-13445665 | None:intergenic | 25.0% |
| ! | ATCATAAGAATAACTGAAGT+TGG | + | chr5.1:13444667-13444686 | None:intergenic | 25.0% |
| ! | ATCTTAGTAGGAATATGTTA+TGG | - | chr5.1:13447112-13447131 | MS.gene67457:intron | 25.0% |
| ! | ATGTGTATATTCTTGTGTAT+GGG | - | chr5.1:13445463-13445482 | MS.gene67457:intron | 25.0% |
| ! | ATTAAACGAAAACCAGTTAT+AGG | - | chr5.1:13446033-13446052 | MS.gene67457:CDS | 25.0% |
| ! | ATTTCTGTCTATATGTATCT+TGG | + | chr5.1:13447425-13447444 | None:intergenic | 25.0% |
| ! | CTTTACACTACTATAATCTT+TGG | + | chr5.1:13445008-13445027 | None:intergenic | 25.0% |
| ! | GATCAAATAGTCATGTATAT+GGG | + | chr5.1:13446314-13446333 | None:intergenic | 25.0% |
| ! | GCATTAATAGAAACTTAGAT+GGG | + | chr5.1:13445645-13445664 | None:intergenic | 25.0% |
| ! | TAAAAGATTGTGAAACTGTT+TGG | - | chr5.1:13445193-13445212 | MS.gene67457:intron | 25.0% |
| ! | TAACATATAATTAGGTCAGT+TGG | - | chr5.1:13446680-13446699 | MS.gene67457:intron | 25.0% |
| ! | TTGAATACGACCAAATATAA+AGG | + | chr5.1:13445907-13445926 | None:intergenic | 25.0% |
| !! | AAAGCTTTTGGTATTTTATC+AGG | - | chr5.1:13444622-13444641 | MS.gene67457:CDS | 25.0% |
| !! | ATAATTTTGCAGCTGAAAAA+TGG | - | chr5.1:13444458-13444477 | MS.gene67457:CDS | 25.0% |
| !! | ATTTTATATGGCAGAAAATC+AGG | - | chr5.1:13446989-13447008 | MS.gene67457:intron | 25.0% |
| !!! | ATGAATACAACATTTTGAGA+AGG | - | chr5.1:13445399-13445418 | MS.gene67457:intron | 25.0% |
| !!! | TATATTGGTTCAATCTTAGT+AGG | - | chr5.1:13447100-13447119 | MS.gene67457:intron | 25.0% |
| !!! | TGATAATTTTTAGGCTTGTT+TGG | - | chr5.1:13445141-13445160 | MS.gene67457:intron | 25.0% |
| !!! | TTCAATATCATAAAGGTATC+CGG | + | chr5.1:13447263-13447282 | None:intergenic | 25.0% |
| !!! | TTGGTTTTTTTAATAGTCCT+AGG | - | chr5.1:13446863-13446882 | MS.gene67457:intron | 25.0% |
| AAAGAACCAAAAAACCAAAC+CGG | - | chr5.1:13446731-13446750 | MS.gene67457:intron | 30.0% | |
| AATATATAGTGATCCTGGTA+AGG | + | chr5.1:13447086-13447105 | None:intergenic | 30.0% | |
| AATGAACTGAAAACAGCTTA+TGG | + | chr5.1:13445249-13445268 | None:intergenic | 30.0% | |
| ACAAAAGGTTTCAGAAGTAA+AGG | - | chr5.1:13445978-13445997 | MS.gene67457:CDS | 30.0% | |
| ACTATGTGTGATGAATAACT+TGG | - | chr5.1:13446140-13446159 | MS.gene67457:CDS | 30.0% | |
| AGAGCATACTATCATTGAAA+TGG | - | chr5.1:13446059-13446078 | MS.gene67457:CDS | 30.0% | |
| AGATGTGTTAAAGTCTCTAA+TGG | - | chr5.1:13444549-13444568 | MS.gene67457:CDS | 30.0% | |
| ATGAATAACTTGGGACAAAT+GGG | - | chr5.1:13446150-13446169 | MS.gene67457:CDS | 30.0% | |
| CTATGTGTGATGAATAACTT+GGG | - | chr5.1:13446141-13446160 | MS.gene67457:CDS | 30.0% | |
| CTATTTGGTCTCAAATACTA+TGG | - | chr5.1:13447172-13447191 | MS.gene67457:CDS | 30.0% | |
| GAAAAGATGAATGAACCAAT+AGG | + | chr5.1:13447229-13447248 | None:intergenic | 30.0% | |
| GATGTGTATATTCTTGTGTA+TGG | - | chr5.1:13445462-13445481 | MS.gene67457:intron | 30.0% | |
| TAGTGGCTTCAATATCATAA+AGG | + | chr5.1:13447270-13447289 | None:intergenic | 30.0% | |
| TGAAATTCTTGGAGAGTTTA+TGG | + | chr5.1:13445273-13445292 | None:intergenic | 30.0% | |
| TTACCAGGATCACTATATAT+TGG | - | chr5.1:13447085-13447104 | MS.gene67457:intron | 30.0% | |
| TTAGTTCGATTCAGAACTAT+AGG | + | chr5.1:13446587-13446606 | None:intergenic | 30.0% | |
| ! | AACGAACCCTGATAATTTTT+AGG | - | chr5.1:13445132-13445151 | MS.gene67457:intron | 30.0% |
| ! | ATAAGTATTTGGGGTTTCTT+TGG | - | chr5.1:13446216-13446235 | MS.gene67457:CDS | 30.0% |
| ! | ATTATGGGATTCATTGGTTA+TGG | - | chr5.1:13444694-13444713 | MS.gene67457:CDS | 30.0% |
| ! | TACACAACATGATTTGTGAA+TGG | + | chr5.1:13444844-13444863 | None:intergenic | 30.0% |
| ! | TGTTTTTCTTTGTCAACACT+AGG | + | chr5.1:13445937-13445956 | None:intergenic | 30.0% |
| ! | TTGTTCTAAATGCAAGAAAC+AGG | + | chr5.1:13447390-13447409 | None:intergenic | 30.0% |
| !! | AAAGATGTTGGTAAAGCTTT+TGG | - | chr5.1:13444610-13444629 | MS.gene67457:CDS | 30.0% |
| !! | AACTACACATAGTTGACTTT+TGG | + | chr5.1:13445080-13445099 | None:intergenic | 30.0% |
| !! | ATTGGTTCATTCATCTTTTC+TGG | - | chr5.1:13447229-13447248 | MS.gene67457:CDS | 30.0% |
| !! | CTTATGATTGGTGCTATTAT+GGG | - | chr5.1:13444679-13444698 | MS.gene67457:CDS | 30.0% |
| !! | TAGTGTTGACAAAGAAAAAC+AGG | - | chr5.1:13445936-13445955 | MS.gene67457:CDS | 30.0% |
| !! | TCTTATGATTGGTGCTATTA+TGG | - | chr5.1:13444678-13444697 | MS.gene67457:CDS | 30.0% |
| !!! | ATTTCATTGGTTTTCACAGT+AGG | - | chr5.1:13445847-13445866 | MS.gene67457:CDS | 30.0% |
| !!! | GGTGAAAACTGTTGATTTTT+GGG | - | chr5.1:13446080-13446099 | MS.gene67457:CDS | 30.0% |
| !!! | TGGTGAAAACTGTTGATTTT+TGG | - | chr5.1:13446079-13446098 | MS.gene67457:CDS | 30.0% |
| ACATATTGCTTGTACCCATA+TGG | + | chr5.1:13444500-13444519 | None:intergenic | 35.0% | |
| AGAAACTTTCCAAAAAACCG+TGG | - | chr5.1:13445535-13445554 | MS.gene67457:intron | 35.0% | |
| AGATGAATGAACCAATAGGA+AGG | + | chr5.1:13447225-13447244 | None:intergenic | 35.0% | |
| ATATGGGTACAAGCAATATG+TGG | - | chr5.1:13444499-13444518 | MS.gene67457:CDS | 35.0% | |
| ATGCAACTCTGCCTTTAAAT+GGG | + | chr5.1:13444963-13444982 | None:intergenic | 35.0% | |
| ATTGAACTGTCATGAACTCT+CGG | - | chr5.1:13446798-13446817 | MS.gene67457:intron | 35.0% | |
| CAAGAATCGATTAATCCGAA+GGG | - | chr5.1:13444908-13444927 | MS.gene67457:intron | 35.0% | |
| CAATAGGAAGGTTAAGAATG+AGG | + | chr5.1:13447213-13447232 | None:intergenic | 35.0% | |
| CAGAACCTTTAACACAAGTT+AGG | + | chr5.1:13446555-13446574 | None:intergenic | 35.0% | |
| CATGCTTGTGTATGTGATTA+TGG | - | chr5.1:13447333-13447352 | MS.gene67457:CDS | 35.0% | |
| CTCATTCTTAACCTTCCTAT+TGG | - | chr5.1:13447211-13447230 | MS.gene67457:CDS | 35.0% | |
| GAACCAATATATAGTGATCC+TGG | + | chr5.1:13447091-13447110 | None:intergenic | 35.0% | |
| GACAGTAGCTATTTATCTCT+TGG | - | chr5.1:13445792-13445811 | MS.gene67457:CDS | 35.0% | |
| GAGTTCATGACAGTTCAATT+CGG | + | chr5.1:13446797-13446816 | None:intergenic | 35.0% | |
| GATGAATAACTTGGGACAAA+TGG | - | chr5.1:13446149-13446168 | MS.gene67457:CDS | 35.0% | |
| GTTATGTTTACCAGCCAATA+AGG | + | chr5.1:13444760-13444779 | None:intergenic | 35.0% | |
| GTTCTTTGGTTACATTGCAT+TGG | - | chr5.1:13447054-13447073 | MS.gene67457:intron | 35.0% | |
| TATGCAACTCTGCCTTTAAA+TGG | + | chr5.1:13444964-13444983 | None:intergenic | 35.0% | |
| TCTCAGATTCTGATGTTCTT+TGG | - | chr5.1:13447040-13447059 | MS.gene67457:intron | 35.0% | |
| TGAACAAACAGCAATGACTA+GGG | + | chr5.1:13446288-13446307 | None:intergenic | 35.0% | |
| TGTATATTCTTGTGTATGGG+TGG | - | chr5.1:13445466-13445485 | MS.gene67457:intron | 35.0% | |
| TGTATATTTAGACAGGGTGT+TGG | - | chr5.1:13445376-13445395 | MS.gene67457:intron | 35.0% | |
| TGTCAATGCAATGACAGTTT+AGG | - | chr5.1:13446400-13446419 | MS.gene67457:CDS | 35.0% | |
| TTGAACAAACAGCAATGACT+AGG | + | chr5.1:13446289-13446308 | None:intergenic | 35.0% | |
| ! | CTGAACCTAACTTGTGTTAA+AGG | - | chr5.1:13446547-13446566 | MS.gene67457:intron | 35.0% |
| ! | GTTTAACTCTCTAGTTCCTA+AGG | - | chr5.1:13445107-13445126 | MS.gene67457:intron | 35.0% |
| !! | TTGTTTGTGTCATTTCTCTG+TGG | - | chr5.1:13446105-13446124 | MS.gene67457:CDS | 35.0% |
| !!! | ATTTTAAAATGTGGTCGCCT+AGG | + | chr5.1:13446883-13446902 | None:intergenic | 35.0% |
| AAAAACCGTGGTCCAATTTC+CGG | - | chr5.1:13445547-13445566 | MS.gene67457:intron | 40.0% | |
| AAACTGTTTGGGAGAGCTTA+CGG | - | chr5.1:13445205-13445224 | MS.gene67457:intron | 40.0% | |
| AAAGGAAGAGACATGTACCA+AGG | - | chr5.1:13445996-13446015 | MS.gene67457:CDS | 40.0% | |
| AAGGAAGAGGGGATATTCTT+TGG | + | chr5.1:13444741-13444760 | None:intergenic | 40.0% | |
| AATCTCAACTTCCTCTACCT+TGG | + | chr5.1:13446016-13446035 | None:intergenic | 40.0% | |
| ACAGGTTCATGAACCTTTGT+TGG | - | chr5.1:13445954-13445973 | MS.gene67457:CDS | 40.0% | |
| AGGATTTGTGACAGCCATAT+GGG | - | chr5.1:13444483-13444502 | MS.gene67457:CDS | 40.0% | |
| ATGGCTTTCGCTTGTGTATT+GGG | - | chr5.1:13447352-13447371 | MS.gene67457:CDS | 40.0% | |
| CAAGAAGTGGCATAGCTAAT+AGG | + | chr5.1:13445882-13445901 | None:intergenic | 40.0% | |
| CACTAGGACTGTTTATGGTT+CGG | - | chr5.1:13446474-13446493 | MS.gene67457:intron | 40.0% | |
| CACTCTCTGAATACTACATC+AGG | - | chr5.1:13446256-13446275 | MS.gene67457:CDS | 40.0% | |
| CCAAGAATCGATTAATCCGA+AGG | - | chr5.1:13444907-13444926 | MS.gene67457:intron | 40.0% | |
| CCAATTTCCGGCATTCTAAA+GGG | - | chr5.1:13445559-13445578 | MS.gene67457:intron | 40.0% | |
| CTCTCTGTTGCTAAAGATGT+TGG | - | chr5.1:13444598-13444617 | MS.gene67457:CDS | 40.0% | |
| CTCTTGGCATTTGATATCTC+TGG | - | chr5.1:13445808-13445827 | MS.gene67457:CDS | 40.0% | |
| GAATATCCCCTCTTCCTTAT+TGG | - | chr5.1:13444743-13444762 | MS.gene67457:CDS | 40.0% | |
| GCAATGAGACAAATGATAGC+AGG | + | chr5.1:13445679-13445698 | None:intergenic | 40.0% | |
| GTATGCTCTTCTCCTATAAC+TGG | + | chr5.1:13446048-13446067 | None:intergenic | 40.0% | |
| TAGAAACTTAGATGGGTCTG+AGG | + | chr5.1:13445638-13445657 | None:intergenic | 40.0% | |
| TAGGATTTGTGACAGCCATA+TGG | - | chr5.1:13444482-13444501 | MS.gene67457:CDS | 40.0% | |
| TATGGCTTTCGCTTGTGTAT+TGG | - | chr5.1:13447351-13447370 | MS.gene67457:CDS | 40.0% | |
| TCCAATTTCCGGCATTCTAA+AGG | - | chr5.1:13445558-13445577 | MS.gene67457:intron | 40.0% | |
| TCTTCTGTAGAAGTTGAAGC+TGG | + | chr5.1:13445727-13445746 | None:intergenic | 40.0% | |
| TGAACCTTTGTTGGCACAAA+AGG | - | chr5.1:13445963-13445982 | MS.gene67457:CDS | 40.0% | |
| TGCAACTCTGCCTTTAAATG+GGG | + | chr5.1:13444962-13444981 | None:intergenic | 40.0% | |
| TTACCAGCCAATAAGGAAGA+GGG | + | chr5.1:13444753-13444772 | None:intergenic | 40.0% | |
| TTCTTTGGACGCATTCTTTC+TGG | - | chr5.1:13446231-13446250 | MS.gene67457:CDS | 40.0% | |
| TTTACCAGCCAATAAGGAAG+AGG | + | chr5.1:13444754-13444773 | None:intergenic | 40.0% | |
| TTTGCAGCTGAAAAATGGCT+AGG | - | chr5.1:13444463-13444482 | MS.gene67457:CDS | 40.0% | |
| ! | CAACATGATTTGTGAATGGC+AGG | + | chr5.1:13444840-13444859 | None:intergenic | 40.0% |
| ! | CCTTCGGATTAATCGATTCT+TGG | + | chr5.1:13444910-13444929 | None:intergenic | 40.0% |
| ! | GAAACCTTTTGTGCCAACAA+AGG | + | chr5.1:13445970-13445989 | None:intergenic | 40.0% |
| ! | TATCAGGGTTCGTTTTCCTT+AGG | + | chr5.1:13445126-13445145 | None:intergenic | 40.0% |
| ! | TCATTGGTTATGGAGCTCAA+TGG | - | chr5.1:13444704-13444723 | MS.gene67457:CDS | 40.0% |
| ! | TGGTTACATTGCATTGGCAA+TGG | - | chr5.1:13447060-13447079 | MS.gene67457:intron | 40.0% |
| !! | ATCTTTTCTGGTCTCATTGC+CGG | - | chr5.1:13447241-13447260 | MS.gene67457:CDS | 40.0% |
| !! | GGTGCTATTATGGGATTCAT+TGG | - | chr5.1:13444688-13444707 | MS.gene67457:CDS | 40.0% |
| !! | GTTTATGGTTCGGTTCAAGA+AGG | - | chr5.1:13446484-13446503 | MS.gene67457:intron | 40.0% |
| !! | TACATAGCCCTTTAGAATGC+CGG | + | chr5.1:13445569-13445588 | None:intergenic | 40.0% |
| !!! | GAAATTGGACCACGGTTTTT+TGG | + | chr5.1:13445547-13445566 | None:intergenic | 40.0% |
| !!! | GTTCTTCCGGTTTGGTTTTT+TGG | + | chr5.1:13446740-13446759 | None:intergenic | 40.0% |
| AAGCTGGTGGAGTTTCATGA+AGG | + | chr5.1:13445711-13445730 | None:intergenic | 45.0% | |
| AGAGACATGTACCAAGGTAG+AGG | - | chr5.1:13446002-13446021 | MS.gene67457:CDS | 45.0% | |
| ATTGAAGCCACTAGTGTACC+AGG | - | chr5.1:13447277-13447296 | MS.gene67457:CDS | 45.0% | |
| CGAACCATAAACAGTCCTAG+TGG | + | chr5.1:13446476-13446495 | None:intergenic | 45.0% | |
| GCAGCAGCTTCAGAACTATT+TGG | - | chr5.1:13447157-13447176 | MS.gene67457:CDS | 45.0% | |
| GTGAACTATCCGTCACAGTT+TGG | + | chr5.1:13446762-13446781 | None:intergenic | 45.0% | |
| TAACTTGGGACAAATGGGAC+AGG | - | chr5.1:13446155-13446174 | MS.gene67457:CDS | 45.0% | |
| TACCAGCCAATAAGGAAGAG+GGG | + | chr5.1:13444752-13444771 | None:intergenic | 45.0% | |
| TCTGTAGAAGTTGAAGCTGG+TGG | + | chr5.1:13445724-13445743 | None:intergenic | 45.0% | |
| TGGCTTTCGCTTGTGTATTG+GGG | - | chr5.1:13447353-13447372 | MS.gene67457:CDS | 45.0% | |
| TTGTGTATTGGGGTGTGGAT+TGG | - | chr5.1:13447363-13447382 | MS.gene67457:CDS | 45.0% | |
| ! | GGCATTCTAAAGGGCTATGT+AGG | - | chr5.1:13445568-13445587 | MS.gene67457:intron | 45.0% |
| ! | TTTCTCTGTGGTGTTGGAAC+AGG | - | chr5.1:13446117-13446136 | MS.gene67457:CDS | 45.0% |
| !! | AATAGTTCTGAAGCTGCTGC+TGG | + | chr5.1:13447157-13447176 | None:intergenic | 45.0% |
| !! | ACAGTTTGGTTCTTCCGGTT+TGG | + | chr5.1:13446748-13446767 | None:intergenic | 45.0% |
| !! | CAGGTCTTGTTTCTGATCGT+TGG | - | chr5.1:13444641-13444660 | MS.gene67457:CDS | 45.0% |
| !! | CCCTTTAGAATGCCGGAAAT+TGG | + | chr5.1:13445562-13445581 | None:intergenic | 45.0% |
| !! | GTGTCATTTCTCTGTGGTGT+TGG | - | chr5.1:13446111-13446130 | MS.gene67457:CDS | 45.0% |
| !!! | TTTTTTTTTTTTTAAAAACT+CGG | - | chr5.1:13444876-13444895 | MS.gene67457:CDS | 5.0% |
| ATCCCCTCTTCCTTATTGGC+TGG | - | chr5.1:13444747-13444766 | MS.gene67457:CDS | 50.0% | |
| CCGGAAGAACCAAACTGTGA+CGG | - | chr5.1:13446750-13446769 | MS.gene67457:intron | 50.0% | |
| GAATGCCGGAAATTGGACCA+CGG | + | chr5.1:13445555-13445574 | None:intergenic | 50.0% | |
| GCAGAAAATCAGGCATGCCA+AGG | - | chr5.1:13446999-13447018 | MS.gene67457:intron | 50.0% | |
| GCGACCACTAGGACTGTTTA+TGG | - | chr5.1:13446469-13446488 | MS.gene67457:intron | 50.0% | |
| GCTGCGTTCCAAACTAACCT+TGG | + | chr5.1:13447019-13447038 | None:intergenic | 50.0% | |
| TGGGTGGAAACAGCACAACA+TGG | - | chr5.1:13445482-13445501 | MS.gene67457:intron | 50.0% | |
| TGTAAAGGATCGCGACCACT+AGG | - | chr5.1:13446458-13446477 | MS.gene67457:intron | 50.0% | |
| TTCGCTTGTGTATTGGGGTG+TGG | - | chr5.1:13447358-13447377 | MS.gene67457:CDS | 50.0% | |
| TTGTGAGGGGCCCCATTTAA+AGG | - | chr5.1:13444949-13444968 | MS.gene67457:intron | 50.0% | |
| ! | CAGGCATGCCAAGGTTAGTT+TGG | - | chr5.1:13447008-13447027 | MS.gene67457:intron | 50.0% |
| !! | CCGTCACAGTTTGGTTCTTC+CGG | + | chr5.1:13446753-13446772 | None:intergenic | 50.0% |
| AATCCCACCGTCCACTTGTG+AGG | - | chr5.1:13444934-13444953 | MS.gene67457:intron | 55.0% | |
| ATCCCACCGTCCACTTGTGA+GGG | - | chr5.1:13444935-13444954 | MS.gene67457:intron | 55.0% | |
| GAAGCCACTAGTGTACCAGG+AGG | - | chr5.1:13447280-13447299 | MS.gene67457:CDS | 55.0% | |
| GGACAAATGGGACAGGCACT+TGG | - | chr5.1:13446162-13446181 | MS.gene67457:CDS | 55.0% | |
| TAAATGGGGCCCCTCACAAG+TGG | + | chr5.1:13444948-13444967 | None:intergenic | 55.0% | |
| TCACAAGTGGACGGTGGGAT+TGG | + | chr5.1:13444935-13444954 | None:intergenic | 55.0% | |
| ! | GCATTGGCAATGGCCTTACC+AGG | - | chr5.1:13447070-13447089 | MS.gene67457:intron | 55.0% |
| GCCACTAGTGTACCAGGAGG+CGG | - | chr5.1:13447283-13447302 | MS.gene67457:CDS | 60.0% | |
| GGAGGCGGAAACACTTGCAC+TGG | - | chr5.1:13447298-13447317 | MS.gene67457:CDS | 60.0% | |
| GTGCAAGTGTTTCCGCCTCC+TGG | + | chr5.1:13447298-13447317 | None:intergenic | 60.0% | |
| TCCCACCGTCCACTTGTGAG+GGG | - | chr5.1:13444936-13444955 | MS.gene67457:intron | 60.0% | |
| TCCGCCTCCTGGTACACTAG+TGG | + | chr5.1:13447287-13447306 | None:intergenic | 60.0% | |
| !! | GACGGTGGGATTGGTCCCTT+CGG | + | chr5.1:13444926-13444945 | None:intergenic | 60.0% |
| GCCCCTCACAAGTGGACGGT+GGG | + | chr5.1:13444940-13444959 | None:intergenic | 65.0% | |
| TGGGGCCCCTCACAAGTGGA+CGG | + | chr5.1:13444944-13444963 | None:intergenic | 65.0% | |
| GGCCCCTCACAAGTGGACGG+TGG | + | chr5.1:13444941-13444960 | None:intergenic | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.1 | gene | 13444439 | 13447471 | 13444439 | ID=MS.gene67457 |
| chr5.1 | mRNA | 13444439 | 13447471 | 13444439 | ID=MS.gene67457.t1;Parent=MS.gene67457 |
| chr5.1 | exon | 13447142 | 13447471 | 13447142 | ID=MS.gene67457.t1.exon1;Parent=MS.gene67457.t1 |
| chr5.1 | CDS | 13447142 | 13447471 | 13447142 | ID=cds.MS.gene67457.t1;Parent=MS.gene67457.t1 |
| chr5.1 | exon | 13445633 | 13446447 | 13445633 | ID=MS.gene67457.t1.exon2;Parent=MS.gene67457.t1 |
| chr5.1 | CDS | 13445633 | 13446447 | 13445633 | ID=cds.MS.gene67457.t1;Parent=MS.gene67457.t1 |
| chr5.1 | exon | 13444439 | 13444907 | 13444439 | ID=MS.gene67457.t1.exon3;Parent=MS.gene67457.t1 |
| chr5.1 | CDS | 13444439 | 13444907 | 13444439 | ID=cds.MS.gene67457.t1;Parent=MS.gene67457.t1 |
| Gene Sequence |
| Protein sequence |
