Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67525.t1 | XP_003612270.1 | 96.2 | 182 | 7 | 0 | 1 | 182 | 4 | 185 | 3.60E-93 | 350.9 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67525.t1 | Q38853 | 59.4 | 143 | 54 | 2 | 44 | 182 | 40 | 182 | 1.4e-42 | 174.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67525.t1 | B7FGV4 | 96.2 | 182 | 7 | 0 | 1 | 182 | 4 | 185 | 2.6e-93 | 350.9 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051228 | MS.gene67525 | 0.822664 | 2.10E-53 | -1.69E-46 |
| MS.gene051617 | MS.gene67525 | 0.800825 | 1.20E-48 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67525.t1 | MTR_5g023170 | 96.154 | 182 | 7 | 0 | 1 | 182 | 4 | 185 | 8.41e-131 | 364 |
| MS.gene67525.t1 | MTR_5g023170 | 95.570 | 158 | 7 | 0 | 1 | 158 | 4 | 161 | 1.94e-110 | 312 |
| MS.gene67525.t1 | MTR_5g022390 | 50.000 | 114 | 55 | 1 | 71 | 182 | 31 | 144 | 8.38e-33 | 114 |
| MS.gene67525.t1 | MTR_8g075420 | 44.444 | 126 | 64 | 2 | 58 | 181 | 5 | 126 | 9.41e-29 | 103 |
| MS.gene67525.t1 | MTR_2g017630 | 41.964 | 112 | 64 | 1 | 72 | 182 | 12 | 123 | 4.03e-28 | 102 |
| MS.gene67525.t1 | MTR_2g059890 | 39.669 | 121 | 68 | 2 | 59 | 178 | 3 | 119 | 6.25e-27 | 99.4 |
| MS.gene67525.t1 | MTR_8g075420 | 48.039 | 102 | 47 | 2 | 58 | 157 | 5 | 102 | 6.32e-22 | 85.9 |
| MS.gene67525.t1 | MTR_2g059890 | 40.404 | 99 | 54 | 2 | 58 | 155 | 2 | 96 | 7.04e-20 | 80.5 |
| MS.gene67525.t1 | MTR_2g059890 | 40.404 | 99 | 54 | 2 | 58 | 155 | 2 | 96 | 9.87e-20 | 80.5 |
| MS.gene67525.t1 | MTR_2g059890 | 40.816 | 98 | 53 | 2 | 59 | 155 | 3 | 96 | 3.06e-19 | 80.5 |
| MS.gene67525.t1 | MTR_5g022390 | 50.000 | 72 | 34 | 1 | 71 | 140 | 31 | 102 | 1.05e-15 | 70.1 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67525.t1 | AT4G35770 | 59.441 | 143 | 54 | 2 | 44 | 182 | 40 | 182 | 2.19e-57 | 178 |
| MS.gene67525.t1 | AT5G66040 | 66.372 | 113 | 38 | 0 | 69 | 181 | 7 | 119 | 3.61e-52 | 163 |
| MS.gene67525.t1 | AT4G35770 | 57.143 | 119 | 47 | 2 | 44 | 158 | 40 | 158 | 5.66e-42 | 138 |
| MS.gene67525.t1 | AT4G35770 | 57.143 | 119 | 47 | 2 | 44 | 158 | 40 | 158 | 9.28e-42 | 138 |
| MS.gene67525.t1 | AT4G35770 | 56.436 | 101 | 40 | 2 | 44 | 140 | 40 | 140 | 2.54e-33 | 116 |
| MS.gene67525.t1 | AT5G66170 | 47.458 | 118 | 56 | 2 | 64 | 179 | 12 | 125 | 6.60e-32 | 112 |
| MS.gene67525.t1 | AT5G66170 | 46.667 | 120 | 56 | 3 | 64 | 179 | 12 | 127 | 6.53e-30 | 107 |
| MS.gene67525.t1 | AT2G21045 | 40.541 | 111 | 66 | 0 | 72 | 182 | 43 | 153 | 3.30e-26 | 98.6 |
| MS.gene67525.t1 | AT5G66040 | 62.500 | 64 | 24 | 0 | 118 | 181 | 1 | 64 | 3.04e-24 | 90.5 |
| MS.gene67525.t1 | AT5G66170 | 50.515 | 97 | 42 | 2 | 64 | 158 | 12 | 104 | 6.58e-24 | 91.7 |
| MS.gene67525.t1 | AT2G17850 | 38.393 | 112 | 67 | 1 | 72 | 181 | 34 | 145 | 1.15e-22 | 89.4 |
| MS.gene67525.t1 | AT4G35770 | 54.430 | 79 | 32 | 2 | 44 | 118 | 40 | 118 | 3.19e-21 | 84.3 |
| MS.gene67525.t1 | AT4G35770 | 54.430 | 79 | 32 | 2 | 44 | 118 | 40 | 118 | 3.19e-21 | 84.3 |
| MS.gene67525.t1 | AT2G17850 | 32.773 | 119 | 69 | 2 | 74 | 181 | 59 | 177 | 4.35e-17 | 75.5 |
| MS.gene67525.t1 | AT2G17850 | 39.326 | 89 | 52 | 1 | 72 | 158 | 34 | 122 | 2.60e-15 | 69.3 |
Find 44 sgRNAs with CRISPR-Local
Find 90 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTATGTCCCTTATTAAATT+TGG | 0.146508 | 5.4:+14939231 | None:intergenic |
| AAAATCTTCCAAATTTAATA+AGG | 0.178231 | 5.4:-14939239 | MS.gene67525:CDS |
| TCTAGCTGGCCATAAGTATT+TGG | 0.181385 | 5.4:-14938990 | MS.gene67525:CDS |
| ACCTTACATCCAAATACTTA+TGG | 0.228445 | 5.4:+14938981 | None:intergenic |
| GTGTGGTTTAAAGGGGAATT+TGG | 0.241136 | 5.4:-14939068 | MS.gene67525:CDS |
| AAGCACGATGTGTGGTTTAA+AGG | 0.244947 | 5.4:-14939077 | MS.gene67525:CDS |
| AGCACGATGTGTGGTTTAAA+GGG | 0.328888 | 5.4:-14939076 | MS.gene67525:CDS |
| GATCCAACTTTGTACATATA+AGG | 0.335693 | 5.4:+14938649 | None:intergenic |
| TATGCTGCTTGGACTCAAAA+TGG | 0.348576 | 5.4:-14937796 | MS.gene67525:CDS |
| AAATCTTCCAAATTTAATAA+GGG | 0.364373 | 5.4:-14939238 | MS.gene67525:CDS |
| ATTAGAGTGTGACCTTGTTA+TGG | 0.398979 | 5.4:+14939387 | None:intergenic |
| GGGAATTTGGAGGAAGTTGT+TGG | 0.404121 | 5.4:-14939055 | MS.gene67525:CDS |
| GCCATAAGTATTTGGATGTA+AGG | 0.427420 | 5.4:-14938982 | MS.gene67525:intron |
| TAGCTGGTGGTTATGCTGCT+TGG | 0.436274 | 5.4:-14937807 | MS.gene67525:CDS |
| ACACGCACTGGCACTGAAGT+TGG | 0.437130 | 5.4:+14939028 | None:intergenic |
| ACCAGCTATGTCTGTGAGTC+CGG | 0.440393 | 5.4:+14937822 | None:intergenic |
| AACCAAAGTGTTCCAACTTC+CGG | 0.448542 | 5.4:-14939195 | MS.gene67525:intron |
| GTGTTCTGCCGTAGAATTAG+AGG | 0.450733 | 5.4:+14939412 | None:intergenic |
| AGAATACATCATTGTTCTGT+AGG | 0.453084 | 5.4:+14937769 | None:intergenic |
| TTTAATGCTGGACACGCACC+TGG | 0.460691 | 5.4:-14938685 | MS.gene67525:CDS |
| TATATGTACAAAGTTGGATC+AGG | 0.472445 | 5.4:-14938646 | MS.gene67525:intron |
| ATACCTTATATGTACAAAGT+TGG | 0.502957 | 5.4:-14938652 | MS.gene67525:CDS |
| TGCATTGTATAGGGGTTCAC+CGG | 0.511879 | 5.4:-14937841 | MS.gene67525:intron |
| GCTCACGAGCTTCTTCTAGC+TGG | 0.514761 | 5.4:-14939004 | MS.gene67525:CDS |
| AGGGTTGTCAGCTTGGGAAA+AGG | 0.515357 | 5.4:-14938225 | MS.gene67525:CDS |
| AGCTCGTGAGCTACACGCAC+TGG | 0.517304 | 5.4:+14939016 | None:intergenic |
| TACCGGAAGTTGGAACACTT+TGG | 0.532325 | 5.4:+14939193 | None:intergenic |
| ATTCACGTCCTCTAATTCTA+CGG | 0.536092 | 5.4:-14939420 | MS.gene67525:CDS |
| ACCACGGAAGAGTTTAATGC+TGG | 0.548422 | 5.4:-14938697 | MS.gene67525:CDS |
| TGGTTTAAAGGGGAATTTGG+AGG | 0.552343 | 5.4:-14939065 | MS.gene67525:CDS |
| GCTTGGGAAAAGGTCTATGA+TGG | 0.555495 | 5.4:-14938215 | MS.gene67525:CDS |
| TAAGGTATGTTAATTGCCCC+AGG | 0.569186 | 5.4:+14938667 | None:intergenic |
| ACCGGACTCACAGACATAGC+TGG | 0.570324 | 5.4:-14937823 | MS.gene67525:CDS |
| ATTTCGATTGTGCAGGACCA+CGG | 0.611382 | 5.4:-14938713 | MS.gene67525:intron |
| GCAAGCGGCGGAGACATCAA+AGG | 0.618010 | 5.4:+14939447 | None:intergenic |
| GCACGATGTGTGGTTTAAAG+GGG | 0.620601 | 5.4:-14939075 | MS.gene67525:CDS |
| GCTTACAGCAGCTAATAAGT+CGG | 0.634017 | 5.4:+14938186 | None:intergenic |
| TTAATGCTGGACACGCACCT+GGG | 0.637364 | 5.4:-14938684 | MS.gene67525:CDS |
| TCCAGCATTAAACTCTTCCG+TGG | 0.640037 | 5.4:+14938696 | None:intergenic |
| GGCAGAACACGACCATAACA+AGG | 0.641310 | 5.4:-14939399 | MS.gene67525:intron |
| TAATGCTGGACACGCACCTG+GGG | 0.667075 | 5.4:-14938683 | MS.gene67525:CDS |
| AGGACGTGAATGAAAGCAAG+CGG | 0.673997 | 5.4:+14939432 | None:intergenic |
| ACGTGAATGAAAGCAAGCGG+CGG | 0.698419 | 5.4:+14939435 | None:intergenic |
| GGACTCACAGACATAGCTGG+TGG | 0.717723 | 5.4:-14937820 | MS.gene67525:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAAATCTTCCAAATTTAATA+AGG | - | chr5.4:14937998-14938017 | MS.gene67525:intron | 15.0% |
| !! | AAATCTTCCAAATTTAATAA+GGG | - | chr5.4:14937999-14938018 | MS.gene67525:intron | 15.0% |
| !! | ATATGAATAGATTAGAAAAA+AGG | + | chr5.4:14938790-14938809 | None:intergenic | 15.0% |
| !!! | CATAATAGTTTTGTAATTTT+AGG | + | chr5.4:14938352-14938371 | None:intergenic | 15.0% |
| !! | AAATAACATACAAAATCTCA+TGG | + | chr5.4:14938947-14938966 | None:intergenic | 20.0% |
| !! | AATTCCAAAACATTAGTTAT+TGG | + | chr5.4:14938461-14938480 | None:intergenic | 20.0% |
| !! | AGTATATAGATATAGAAGAA+TGG | + | chr5.4:14937880-14937899 | None:intergenic | 20.0% |
| !! | TTGTAATATTCTTAGTGTTT+AGG | - | chr5.4:14938642-14938661 | MS.gene67525:intron | 20.0% |
| !!! | ATAACCAATAACTAATGTTT+TGG | - | chr5.4:14938454-14938473 | MS.gene67525:intron | 20.0% |
| !!! | TTTTCATCAATAATTAGTCT+TGG | - | chr5.4:14939286-14939305 | MS.gene67525:intron | 20.0% |
| ! | AATTATGTGTTCATGTATAC+AGG | - | chr5.4:14938828-14938847 | MS.gene67525:intron | 25.0% |
| ! | ATACCTTATATGTACAAAGT+TGG | - | chr5.4:14938585-14938604 | MS.gene67525:intron | 25.0% |
| ! | ATTATGTGTTCATGTATACA+GGG | - | chr5.4:14938829-14938848 | MS.gene67525:intron | 25.0% |
| ! | CAGTTGTTTGATTAATCTAA+TGG | + | chr5.4:14938717-14938736 | None:intergenic | 25.0% |
| ! | CATTAGCAGATGAATTAATT+TGG | + | chr5.4:14938979-14938998 | None:intergenic | 25.0% |
| ! | CATTGAAGTCTTGATTAAAT+TGG | + | chr5.4:14938289-14938308 | None:intergenic | 25.0% |
| ! | GCAATGTAAATATTAGCAAT+TGG | + | chr5.4:14939087-14939106 | None:intergenic | 25.0% |
| ! | TCTATGTCCCTTATTAAATT+TGG | + | chr5.4:14938009-14938028 | None:intergenic | 25.0% |
| ! | TTAGATTAATCAAACAACTG+AGG | - | chr5.4:14938717-14938736 | MS.gene67525:intron | 25.0% |
| !! | GTTAATAAAGTATCTATCAC+TGG | + | chr5.4:14939331-14939350 | None:intergenic | 25.0% |
| !!! | AATGTTTTGGAATTGTGATT+TGG | - | chr5.4:14938467-14938486 | MS.gene67525:intron | 25.0% |
| !!! | AATTGTTTTGCATTGTATAG+GGG | - | chr5.4:14939388-14939407 | MS.gene67525:intron | 25.0% |
| !!! | ACAATTGTTTTGCATTGTAT+AGG | - | chr5.4:14939386-14939405 | MS.gene67525:intron | 25.0% |
| !!! | CAATTGTTTTGCATTGTATA+GGG | - | chr5.4:14939387-14939406 | MS.gene67525:intron | 25.0% |
| !!! | CTAATGTTATTGTTTTTGCA+GGG | - | chr5.4:14938993-14939012 | MS.gene67525:CDS | 25.0% |
| AAACTCAAACAAGAAGTGAA+AGG | + | chr5.4:14939214-14939233 | None:intergenic | 30.0% | |
| AACTCAAACAAGAAGTGAAA+GGG | + | chr5.4:14939213-14939232 | None:intergenic | 30.0% | |
| AAGTATCTATCACTGGAAAT+TGG | + | chr5.4:14939324-14939343 | None:intergenic | 30.0% | |
| ACCTTACATCCAAATACTTA+TGG | + | chr5.4:14938259-14938278 | None:intergenic | 30.0% | |
| ATTAGAAAAAAGGACACCAA+TGG | + | chr5.4:14938780-14938799 | None:intergenic | 30.0% | |
| GATCCAACTTTGTACATATA+AGG | + | chr5.4:14938591-14938610 | None:intergenic | 30.0% | |
| TATATGTACAAAGTTGGATC+AGG | - | chr5.4:14938591-14938610 | MS.gene67525:intron | 30.0% | |
| ! | AGATCAATTTGGTAATCCAT+TGG | - | chr5.4:14938761-14938780 | MS.gene67525:intron | 30.0% |
| ! | ATCTTCTTTTCTAAACTGTG+AGG | + | chr5.4:14938889-14938908 | None:intergenic | 30.0% |
| ! | GAACAGCAATTTTGTTAAAG+AGG | - | chr5.4:14938860-14938879 | MS.gene67525:intron | 30.0% |
| !! | TCAACACTTTTTACACTTAC+CGG | + | chr5.4:14938064-14938083 | None:intergenic | 30.0% |
| !!! | GCTAATGTTATTGTTTTTGC+AGG | - | chr5.4:14938992-14939011 | MS.gene67525:CDS | 30.0% |
| ACTCAAACAAGAAGTGAAAG+GGG | + | chr5.4:14939212-14939231 | None:intergenic | 35.0% | |
| ATTAGAGTGTGACCTTGTTA+TGG | + | chr5.4:14937853-14937872 | None:intergenic | 35.0% | |
| ATTCACGTCCTCTAATTCTA+CGG | - | chr5.4:14937817-14937836 | MS.gene67525:CDS | 35.0% | |
| CAACTGAGGTTTGATAGAAT+AGG | - | chr5.4:14938731-14938750 | MS.gene67525:intron | 35.0% | |
| CACAATCGAAATAAACAGGT+TGG | + | chr5.4:14938516-14938535 | None:intergenic | 35.0% | |
| CCTCATTCAACTAAAATGCT+AGG | + | chr5.4:14939240-14939259 | None:intergenic | 35.0% | |
| GCCATAAGTATTTGGATGTA+AGG | - | chr5.4:14938255-14938274 | MS.gene67525:intron | 35.0% | |
| TAGACTGAAAGTTGAGTACA+CGG | - | chr5.4:14938388-14938407 | MS.gene67525:CDS | 35.0% | |
| TAGGTTGCAAGAGATCAATT+TGG | - | chr5.4:14938750-14938769 | MS.gene67525:intron | 35.0% | |
| ! | TTTTTACACTTACCGGAAGT+TGG | + | chr5.4:14938057-14938076 | None:intergenic | 35.0% |
| !! | TTTTGAGCTCAAAGCTTGTT+TGG | - | chr5.4:14939361-14939380 | MS.gene67525:intron | 35.0% |
| !!! | CCTAGCATTTTAGTTGAATG+AGG | - | chr5.4:14939237-14939256 | MS.gene67525:CDS | 35.0% |
| !!! | TTTTTTCAAAGCACGATGTG+TGG | - | chr5.4:14938152-14938171 | MS.gene67525:intron | 35.0% |
| AAGCACGATGTGTGGTTTAA+AGG | - | chr5.4:14938160-14938179 | MS.gene67525:intron | 40.0% | |
| ACATACAAAATCTCATGGCG+CGG | + | chr5.4:14938942-14938961 | None:intergenic | 40.0% | |
| AGCACGATGTGTGGTTTAAA+GGG | - | chr5.4:14938161-14938180 | MS.gene67525:intron | 40.0% | |
| CCTGCACAATCGAAATAAAC+AGG | + | chr5.4:14938520-14938539 | None:intergenic | 40.0% | |
| CCTGTTTATTTCGATTGTGC+AGG | - | chr5.4:14938517-14938536 | MS.gene67525:intron | 40.0% | |
| GCTTACAGCAGCTAATAAGT+CGG | + | chr5.4:14939054-14939073 | None:intergenic | 40.0% | |
| GTGTGGTTTAAAGGGGAATT+TGG | - | chr5.4:14938169-14938188 | MS.gene67525:intron | 40.0% | |
| TAAGGTATGTTAATTGCCCC+AGG | + | chr5.4:14938573-14938592 | None:intergenic | 40.0% | |
| TCTAGCTGGCCATAAGTATT+TGG | - | chr5.4:14938247-14938266 | MS.gene67525:intron | 40.0% | |
| TGGTTTAAAGGGGAATTTGG+AGG | - | chr5.4:14938172-14938191 | MS.gene67525:intron | 40.0% | |
| ! | AACCAAAGTGTTCCAACTTC+CGG | - | chr5.4:14938042-14938061 | MS.gene67525:intron | 40.0% |
| ! | TATGCTGCTTGGACTCAAAA+TGG | - | chr5.4:14939441-14939460 | MS.gene67525:CDS | 40.0% |
| ACCACGGAAGAGTTTAATGC+TGG | - | chr5.4:14938540-14938559 | MS.gene67525:intron | 45.0% | |
| AGGACGTGAATGAAAGCAAG+CGG | + | chr5.4:14937808-14937827 | None:intergenic | 45.0% | |
| ATTTCGATTGTGCAGGACCA+CGG | - | chr5.4:14938524-14938543 | MS.gene67525:intron | 45.0% | |
| GCACGATGTGTGGTTTAAAG+GGG | - | chr5.4:14938162-14938181 | MS.gene67525:intron | 45.0% | |
| GCTTGGGAAAAGGTCTATGA+TGG | - | chr5.4:14939022-14939041 | MS.gene67525:CDS | 45.0% | |
| GGGAATTTGGAGGAAGTTGT+TGG | - | chr5.4:14938182-14938201 | MS.gene67525:intron | 45.0% | |
| GTGTTCTGCCGTAGAATTAG+AGG | + | chr5.4:14937828-14937847 | None:intergenic | 45.0% | |
| TACCGGAAGTTGGAACACTT+TGG | + | chr5.4:14938047-14938066 | None:intergenic | 45.0% | |
| TCCAGCATTAAACTCTTCCG+TGG | + | chr5.4:14938544-14938563 | None:intergenic | 45.0% | |
| TGCATTGTATAGGGGTTCAC+CGG | - | chr5.4:14939396-14939415 | MS.gene67525:intron | 45.0% | |
| ! | GGTTGGAAAGTCGTGAGTTT+TGG | + | chr5.4:14938499-14938518 | None:intergenic | 45.0% |
| ! | TTTTGCAGGGTTGTCAGCTT+GGG | - | chr5.4:14939006-14939025 | MS.gene67525:CDS | 45.0% |
| ! | TTTTTGCAGGGTTGTCAGCT+TGG | - | chr5.4:14939005-14939024 | MS.gene67525:CDS | 45.0% |
| AAAATCTCATGGCGCGGCAA+AGG | + | chr5.4:14938936-14938955 | None:intergenic | 50.0% | |
| ACCAGCTATGTCTGTGAGTC+CGG | + | chr5.4:14939418-14939437 | None:intergenic | 50.0% | |
| ACGTGAATGAAAGCAAGCGG+CGG | + | chr5.4:14937805-14937824 | None:intergenic | 50.0% | |
| AGGGTTGTCAGCTTGGGAAA+AGG | - | chr5.4:14939012-14939031 | MS.gene67525:CDS | 50.0% | |
| GGCAGAACACGACCATAACA+AGG | - | chr5.4:14937838-14937857 | MS.gene67525:intron | 50.0% | |
| TAGCTGGTGGTTATGCTGCT+TGG | - | chr5.4:14939430-14939449 | MS.gene67525:CDS | 50.0% | |
| TTAATGCTGGACACGCACCT+GGG | - | chr5.4:14938553-14938572 | MS.gene67525:intron | 50.0% | |
| TTTAATGCTGGACACGCACC+TGG | - | chr5.4:14938552-14938571 | MS.gene67525:intron | 50.0% | |
| ACCGGACTCACAGACATAGC+TGG | - | chr5.4:14939414-14939433 | MS.gene67525:CDS | 55.0% | |
| GCTCACGAGCTTCTTCTAGC+TGG | - | chr5.4:14938233-14938252 | MS.gene67525:intron | 55.0% | |
| GGACTCACAGACATAGCTGG+TGG | - | chr5.4:14939417-14939436 | MS.gene67525:CDS | 55.0% | |
| TAATGCTGGACACGCACCTG+GGG | - | chr5.4:14938554-14938573 | MS.gene67525:intron | 55.0% | |
| ! | ACACGCACTGGCACTGAAGT+TGG | + | chr5.4:14938212-14938231 | None:intergenic | 55.0% |
| AGCTCGTGAGCTACACGCAC+TGG | + | chr5.4:14938224-14938243 | None:intergenic | 60.0% | |
| GCAAGCGGCGGAGACATCAA+AGG | + | chr5.4:14937793-14937812 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 14937777 | 14939482 | 14937777 | ID=MS.gene67525 |
| chr5.4 | mRNA | 14937777 | 14939482 | 14937777 | ID=MS.gene67525.t1;Parent=MS.gene67525 |
| chr5.4 | exon | 14939400 | 14939482 | 14939400 | ID=MS.gene67525.t1.exon1;Parent=MS.gene67525.t1 |
| chr5.4 | CDS | 14939400 | 14939482 | 14939400 | ID=cds.MS.gene67525.t1;Parent=MS.gene67525.t1 |
| chr5.4 | exon | 14939196 | 14939273 | 14939196 | ID=MS.gene67525.t1.exon2;Parent=MS.gene67525.t1 |
| chr5.4 | CDS | 14939196 | 14939273 | 14939196 | ID=cds.MS.gene67525.t1;Parent=MS.gene67525.t1 |
| chr5.4 | exon | 14938983 | 14939096 | 14938983 | ID=MS.gene67525.t1.exon3;Parent=MS.gene67525.t1 |
| chr5.4 | CDS | 14938983 | 14939096 | 14938983 | ID=cds.MS.gene67525.t1;Parent=MS.gene67525.t1 |
| chr5.4 | exon | 14938647 | 14938720 | 14938647 | ID=MS.gene67525.t1.exon4;Parent=MS.gene67525.t1 |
| chr5.4 | CDS | 14938647 | 14938720 | 14938647 | ID=cds.MS.gene67525.t1;Parent=MS.gene67525.t1 |
| chr5.4 | exon | 14938339 | 14938409 | 14938339 | ID=MS.gene67525.t1.exon5;Parent=MS.gene67525.t1 |
| chr5.4 | CDS | 14938339 | 14938409 | 14938339 | ID=cds.MS.gene67525.t1;Parent=MS.gene67525.t1 |
| chr5.4 | exon | 14938192 | 14938245 | 14938192 | ID=MS.gene67525.t1.exon6;Parent=MS.gene67525.t1 |
| chr5.4 | CDS | 14938192 | 14938245 | 14938192 | ID=cds.MS.gene67525.t1;Parent=MS.gene67525.t1 |
| chr5.4 | exon | 14937777 | 14937851 | 14937777 | ID=MS.gene67525.t1.exon7;Parent=MS.gene67525.t1 |
| chr5.4 | CDS | 14937777 | 14937851 | 14937777 | ID=cds.MS.gene67525.t1;Parent=MS.gene67525.t1 |
| Gene Sequence |
| Protein sequence |
