Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67622.t1 | XP_024627930.1 | 70.9 | 429 | 91 | 3 | 176 | 571 | 1 | 428 | 4.60E-143 | 518.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67622.t1 | A0A396I0R2 | 60.5 | 531 | 114 | 8 | 176 | 655 | 1 | 486 | 3.2e-130 | 475.3 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene056356 | MS.gene67622 | 0.828092 | 1.09E-54 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67622.t1 | MTR_0029s0140 | 82.639 | 144 | 25 | 0 | 501 | 644 | 241 | 384 | 1.39e-65 | 221 |
| MS.gene67622.t1 | MTR_0029s0140 | 82.051 | 78 | 14 | 0 | 293 | 370 | 162 | 239 | 1.71e-39 | 150 |
| MS.gene67622.t1 | MTR_2g102860 | 81.295 | 139 | 26 | 0 | 509 | 647 | 13 | 151 | 3.16e-64 | 209 |
| MS.gene67622.t1 | MTR_5g080310 | 77.852 | 149 | 29 | 1 | 503 | 651 | 122 | 266 | 2.40e-63 | 211 |
| MS.gene67622.t1 | MTR_2g020090 | 67.516 | 157 | 50 | 1 | 488 | 644 | 49 | 204 | 3.21e-63 | 209 |
| MS.gene67622.t1 | MTR_4g017750 | 81.119 | 143 | 23 | 1 | 502 | 644 | 110 | 248 | 3.74e-63 | 210 |
| MS.gene67622.t1 | MTR_3g058800 | 71.831 | 142 | 39 | 1 | 503 | 644 | 10 | 150 | 6.08e-62 | 204 |
| MS.gene67622.t1 | MTR_6g463490 | 82.051 | 117 | 21 | 0 | 531 | 647 | 3 | 119 | 6.07e-60 | 197 |
| MS.gene67622.t1 | MTR_1g023240 | 72.785 | 158 | 37 | 1 | 484 | 641 | 17 | 168 | 4.42e-59 | 199 |
| MS.gene67622.t1 | MTR_4g023110 | 71.111 | 135 | 38 | 1 | 500 | 634 | 6 | 139 | 3.52e-57 | 190 |
| MS.gene67622.t1 | MTR_8g027455 | 52.866 | 157 | 65 | 4 | 501 | 651 | 23 | 176 | 1.25e-39 | 151 |
| MS.gene67622.t1 | MTR_1g077650 | 61.818 | 110 | 41 | 1 | 502 | 611 | 46 | 154 | 2.53e-37 | 137 |
| MS.gene67622.t1 | MTR_7g035425 | 38.182 | 165 | 87 | 5 | 309 | 461 | 179 | 340 | 4.42e-24 | 104 |
| MS.gene67622.t1 | MTR_7g037680 | 29.858 | 211 | 116 | 5 | 414 | 623 | 17 | 196 | 3.41e-20 | 90.9 |
| MS.gene67622.t1 | MTR_5g053700 | 82.000 | 50 | 5 | 1 | 595 | 644 | 1 | 46 | 2.26e-18 | 79.7 |
| MS.gene67622.t1 | MTR_2g077640 | 29.412 | 221 | 104 | 8 | 371 | 583 | 34 | 210 | 2.16e-17 | 83.2 |
| MS.gene67622.t1 | MTR_7g032460 | 61.667 | 60 | 19 | 1 | 131 | 190 | 37 | 92 | 4.52e-14 | 68.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 200 sgRNAs with CRISPR-Local
Find 424 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CATGATTAAGGGTTAGTCTT+AGG | 0.163135 | 3.3:+9794161 | None:intergenic |
| GCGTTGGTTTAGGCTCTTTC+AGG | 0.197485 | 3.3:-9796094 | MS.gene67622:intron |
| ATCCAGATCCCCTTCAATAT+TGG | 0.215799 | 3.3:+9798141 | None:intergenic |
| AGGACCCTTCACCATGATTA+AGG | 0.228634 | 3.3:+9794149 | None:intergenic |
| TGTGGGAGGGACCTTGAGCC+TGG | 0.232485 | 3.3:+9793969 | None:intergenic |
| GGGATTTGTTGTTGGGAAAA+AGG | 0.249414 | 3.3:+9796465 | None:intergenic |
| ATCACCAAATTCTTCATAAA+AGG | 0.257443 | 3.3:+9798873 | None:intergenic |
| TCGTGAAGCTCGTTAATAAA+TGG | 0.281332 | 3.3:+9795579 | None:intergenic |
| TGATGAATTGGTTAAGTATT+GGG | 0.285226 | 3.3:-9795830 | MS.gene67622:CDS |
| CCTGCCTATCTTTGATGAAT+TGG | 0.289625 | 3.3:-9795842 | MS.gene67622:CDS |
| GTGGAGGGATTTGTTGTTGT+TGG | 0.293558 | 3.3:+9796499 | None:intergenic |
| TATGGCACCATACCTCCTTA+TGG | 0.295998 | 3.3:-9796588 | MS.gene67622:CDS |
| CTGGCGTCAGCTGAGGCTGC+TGG | 0.296050 | 3.3:+9794125 | None:intergenic |
| TGGAGGGATTTGTTGTTGTT+GGG | 0.298410 | 3.3:+9796500 | None:intergenic |
| TTGCCCTTGCTCTTTCCATT+AGG | 0.302043 | 3.3:+9796837 | None:intergenic |
| ATAACTGCTATCATCACTTT+TGG | 0.303053 | 3.3:-9796152 | MS.gene67622:CDS |
| TCCAGATCCCCTTCAATATT+GGG | 0.305606 | 3.3:+9798142 | None:intergenic |
| TTGCTCTTTCCATTAGGTTT+CGG | 0.328125 | 3.3:+9796843 | None:intergenic |
| TAATGAAGACCAAGTGTTCT+TGG | 0.337088 | 3.3:-9795990 | MS.gene67622:intron |
| CCGGTTCTTCTTTGCTTTGT+CGG | 0.346522 | 3.3:+9795783 | None:intergenic |
| CTTGCCGAGGCTATTTCTAA+TGG | 0.350981 | 3.3:-9794310 | MS.gene67622:CDS |
| CCAGTACATCCTGGATATTA+TGG | 0.365206 | 3.3:-9796606 | MS.gene67622:CDS |
| TCTTCTAGCCAGGGATCACC+TGG | 0.378638 | 3.3:-9796696 | MS.gene67622:intron |
| GGATTTGTTGTTGTTGGGGA+AGG | 0.379887 | 3.3:+9796505 | None:intergenic |
| CGAGAATCTCTCGGATAATC+CGG | 0.382857 | 3.3:+9796330 | None:intergenic |
| ATGATTAAGGGTTAGTCTTA+GGG | 0.387621 | 3.3:+9794162 | None:intergenic |
| TGAGCTGATCGGTACTCTTT+CGG | 0.387745 | 3.3:+9799043 | None:intergenic |
| TTGTGGAGGGATTTGTTGTT+GGG | 0.391855 | 3.3:+9796458 | None:intergenic |
| CTGTGCTATTTACGTTCATA+AGG | 0.397002 | 3.3:-9799230 | MS.gene67622:CDS |
| ATTTGTTGTTGTTGGGGAAG+GGG | 0.399109 | 3.3:+9796507 | None:intergenic |
| GTTGTTGTTGGGGAAGGGGA+AGG | 0.412477 | 3.3:+9796511 | None:intergenic |
| GAAGAACCGGGCGTCGGAAA+AGG | 0.413034 | 3.3:-9795770 | MS.gene67622:CDS |
| GCTATACGGTCTTGGTAACT+TGG | 0.413255 | 3.3:-9794218 | MS.gene67622:CDS |
| TTGATGAATTGGTTAAGTAT+TGG | 0.416006 | 3.3:-9795831 | MS.gene67622:CDS |
| GATTGCTTCAGCAGCCGGTT+TGG | 0.416531 | 3.3:+9796188 | None:intergenic |
| AATGAAGACCAAGTGTTCTT+GGG | 0.417305 | 3.3:-9795989 | MS.gene67622:intron |
| TGAATAAGCTCCCGCATCTC+TGG | 0.419371 | 3.3:+9794106 | None:intergenic |
| CCGACAAAGCAAAGAAGAAC+CGG | 0.424122 | 3.3:-9795783 | MS.gene67622:CDS |
| ATGGCACCATACCTCCTTAT+GGG | 0.425132 | 3.3:-9796587 | MS.gene67622:CDS |
| GCCCAATATTGAAGGGGATC+TGG | 0.432948 | 3.3:-9798143 | MS.gene67622:CDS |
| CAGGAGCAGCTACACTAGCC+TGG | 0.433549 | 3.3:+9796667 | None:intergenic |
| AGGAGCAGCTGGCTCAGTTT+AGG | 0.434219 | 3.3:-9793997 | MS.gene67622:CDS |
| GTTGTGGAGGGATTTGTTGT+TGG | 0.434305 | 3.3:+9796457 | None:intergenic |
| TGTTGTTGTTGGGGAACAGG+TGG | 0.434610 | 3.3:+9796429 | None:intergenic |
| TGATGAGGATAATGTTGGTT+TGG | 0.435241 | 3.3:-9798170 | MS.gene67622:CDS |
| GTTGTTGTTGGGGAACAGGT+GGG | 0.436449 | 3.3:+9796430 | None:intergenic |
| TTGCCGAGGCTATTTCTAAT+GGG | 0.436783 | 3.3:-9794309 | MS.gene67622:CDS |
| TCCTCCTCATCTACCGGATA+AGG | 0.441120 | 3.3:+9793914 | None:intergenic |
| GGAATGCCTCCGAAACCTAA+TGG | 0.442258 | 3.3:-9796852 | MS.gene67622:CDS |
| TCAGCTGACGCCAGAGATGC+GGG | 0.443446 | 3.3:-9794116 | MS.gene67622:CDS |
| CTCGTCGTCGATTCATCTTA+AGG | 0.445948 | 3.3:-9796311 | MS.gene67622:CDS |
| TGGCGTCAGCTGAGGCTGCT+GGG | 0.447507 | 3.3:+9794126 | None:intergenic |
| GGACCCTTCACCATGATTAA+GGG | 0.448151 | 3.3:+9794150 | None:intergenic |
| AAGAAGAAGGGAAAGCTATA+CGG | 0.450481 | 3.3:-9794232 | MS.gene67622:CDS |
| AAGGAAACCTCATACTTTCT+CGG | 0.452585 | 3.3:-9799211 | MS.gene67622:CDS |
| ACCGGATAAGGCTCAACATT+GGG | 0.453953 | 3.3:+9793926 | None:intergenic |
| TTAACCAATTCATCAAAGAT+AGG | 0.456166 | 3.3:+9795838 | None:intergenic |
| CCATAATATCCAGGATGTAC+TGG | 0.458343 | 3.3:+9796606 | None:intergenic |
| CGAGCGTGCTAGGCGTGTGC+AGG | 0.460476 | 3.3:-9795520 | MS.gene67622:intron |
| TTTCTTGTTGGGGTTGTGGT+GGG | 0.460769 | 3.3:+9796403 | None:intergenic |
| GATCTGATTGCTTCAGCAGC+CGG | 0.463673 | 3.3:+9796183 | None:intergenic |
| TTGGAAGAGCCCAATATTGA+AGG | 0.464778 | 3.3:-9798151 | MS.gene67622:CDS |
| GGGAGGACCCAGGTGATCCC+TGG | 0.467266 | 3.3:+9796688 | None:intergenic |
| GATTTGTTGTTGTTGGGGAA+GGG | 0.469554 | 3.3:+9796506 | None:intergenic |
| CACAGCTTCCCAAGAACACT+TGG | 0.469604 | 3.3:+9795981 | None:intergenic |
| TTGTCTCCTCAAACCACATA+CGG | 0.474423 | 3.3:+9795887 | None:intergenic |
| AAGGGAAAGCTATACGGTCT+TGG | 0.480141 | 3.3:-9794226 | MS.gene67622:CDS |
| GCCTTGCCAGAGTGGCGACC+AGG | 0.480824 | 3.3:+9799088 | None:intergenic |
| TGAAAACTGATAAGGTCAAC+GGG | 0.481152 | 3.3:+9799116 | None:intergenic |
| AAGAGCCCGTATGTGGTTTG+AGG | 0.484380 | 3.3:-9795893 | MS.gene67622:CDS |
| GCTCCTCATATGACCTTTGA+CGG | 0.484551 | 3.3:+9794014 | None:intergenic |
| TTGATGCAACACTACCCTTC+CGG | 0.489648 | 3.3:+9794185 | None:intergenic |
| CGGAGAGCACGCTGAGCGTA+TGG | 0.490492 | 3.3:-9795713 | MS.gene67622:intron |
| CGAAGAGGGTGGTGGAGAGC+TGG | 0.490661 | 3.3:-9796373 | MS.gene67622:CDS |
| TCCCAATGTTGAGCCTTATC+CGG | 0.490951 | 3.3:-9793927 | MS.gene67622:CDS |
| GGAGGGATTTGTTGTTGTTG+GGG | 0.491344 | 3.3:+9796501 | None:intergenic |
| TGGCGCGATGCACAATTTGA+AGG | 0.492701 | 3.3:-9798241 | MS.gene67622:CDS |
| GGGATCACCTGGGTCCTCCC+AGG | 0.492872 | 3.3:-9796685 | MS.gene67622:CDS |
| GGCTCAGTTTAGGCAAGCCC+AGG | 0.496816 | 3.3:-9793987 | MS.gene67622:CDS |
| GTCGCCACTCTGGCAAGGCA+AGG | 0.497404 | 3.3:-9799084 | MS.gene67622:CDS |
| TTGGGCGTCTGAGGCGTTCA+AGG | 0.500299 | 3.3:-9795812 | MS.gene67622:CDS |
| AAGAACCGGGCGTCGGAAAA+GGG | 0.501037 | 3.3:-9795769 | MS.gene67622:CDS |
| CTCTTTCCATTAGGTTTCGG+AGG | 0.502358 | 3.3:+9796846 | None:intergenic |
| CGCATCTCTGGCGTCAGCTG+AGG | 0.503299 | 3.3:+9794118 | None:intergenic |
| GAAAGAGCAAGGGCAACAGC+AGG | 0.505028 | 3.3:-9796830 | MS.gene67622:CDS |
| ATAAACTTCATTTCGTGTAG+TGG | 0.506695 | 3.3:+9799156 | None:intergenic |
| AATACTGCGACGAGCGTGCT+AGG | 0.506701 | 3.3:-9795530 | MS.gene67622:CDS |
| CCAATTCATCAAAGATAGGC+AGG | 0.508067 | 3.3:+9795842 | None:intergenic |
| ATTCTTTGACCTTCAACACT+TGG | 0.510375 | 3.3:-9794273 | MS.gene67622:CDS |
| AAGATTTGCTTAACCGTCAA+AGG | 0.511841 | 3.3:-9794027 | MS.gene67622:CDS |
| TGAGGAGCAGAAGCCGTCGC+AGG | 0.513097 | 3.3:+9796648 | None:intergenic |
| AATCTACCTGGTCGCCACTC+TGG | 0.513373 | 3.3:-9799094 | MS.gene67622:CDS |
| AGGTAGATTGAAAACTGATA+AGG | 0.519518 | 3.3:+9799108 | None:intergenic |
| TAGCACGCTCGTCGCAGTAT+TGG | 0.521315 | 3.3:+9795532 | None:intergenic |
| ATGATAGCAGTTATGAATGA+TGG | 0.523463 | 3.3:+9796161 | None:intergenic |
| CTGGCAAGGCAAGGGAACAT+TGG | 0.524370 | 3.3:-9799075 | MS.gene67622:CDS |
| GCTTCAGCAGCCGGTTTGGA+AGG | 0.524446 | 3.3:+9796192 | None:intergenic |
| AGACAAGAAAGCGGCCACAT+TGG | 0.524562 | 3.3:-9795870 | MS.gene67622:CDS |
| GTGGGAGGGACCTTGAGCCT+GGG | 0.524940 | 3.3:+9793970 | None:intergenic |
| GGCGCGATGCACAATTTGAA+GGG | 0.526702 | 3.3:-9798240 | MS.gene67622:CDS |
| TTAGGAGTTAACAAAACAGC+AGG | 0.527356 | 3.3:+9798205 | None:intergenic |
| GGAGGAAGGAAGGTCCCATA+AGG | 0.527593 | 3.3:+9796573 | None:intergenic |
| ACTTCATTTCGTGTAGTGGT+TGG | 0.528648 | 3.3:+9799160 | None:intergenic |
| CTCAGCTGACGCCAGAGATG+CGG | 0.529797 | 3.3:-9794117 | MS.gene67622:CDS |
| CTTGTGACAAATAGGCTAAG+AGG | 0.530774 | 3.3:-9795614 | MS.gene67622:intron |
| AGAAAGCGGCCACATTGGAT+TGG | 0.531391 | 3.3:-9795865 | MS.gene67622:CDS |
| TACTGGAGGGCACATGTAAG+TGG | 0.532234 | 3.3:+9796623 | None:intergenic |
| GAAAATGATGAGGATAATGT+TGG | 0.533983 | 3.3:-9798175 | MS.gene67622:CDS |
| TCATCATCCTCCTCATCTAC+CGG | 0.536805 | 3.3:+9793908 | None:intergenic |
| ATTGAAGGGGATCTGGATGA+AGG | 0.541342 | 3.3:-9798136 | MS.gene67622:CDS |
| AGGAGCAGCTACACTAGCCT+GGG | 0.541346 | 3.3:+9796668 | None:intergenic |
| TAACCGTCAAAGGTCATATG+AGG | 0.541572 | 3.3:-9794017 | MS.gene67622:CDS |
| GAAGGTCCCATAAGGAGGTA+TGG | 0.543026 | 3.3:+9796581 | None:intergenic |
| TACTTAGAAGAGCCCGTATG+TGG | 0.543591 | 3.3:-9795900 | MS.gene67622:CDS |
| TTAAAAGCGGCGCACTAGTG+TGG | 0.545514 | 3.3:+9793951 | None:intergenic |
| AAGGTCATATGAGGAGCAGC+TGG | 0.548144 | 3.3:-9794008 | MS.gene67622:CDS |
| TAAAAGCGGCGCACTAGTGT+GGG | 0.551339 | 3.3:+9793952 | None:intergenic |
| TCGCCACTCTGGCAAGGCAA+GGG | 0.553730 | 3.3:-9799083 | MS.gene67622:CDS |
| CAAGAAAATGTGGTCGAAGA+GGG | 0.555530 | 3.3:-9796387 | MS.gene67622:CDS |
| AAATAGCCTCGGCAAGCTGC+CGG | 0.555959 | 3.3:+9794317 | None:intergenic |
| ATGTGCCCTCCAGTACATCC+TGG | 0.557262 | 3.3:-9796615 | MS.gene67622:CDS |
| AGTTGCTGGAGACAAGAAGA+AGG | 0.557374 | 3.3:-9794245 | MS.gene67622:CDS |
| TACCGGATAAGGCTCAACAT+TGG | 0.558734 | 3.3:+9793925 | None:intergenic |
| TTTAGGCAAGCCCAGGCTCA+AGG | 0.561956 | 3.3:-9793980 | MS.gene67622:CDS |
| CTAAGACTAACCCTTAATCA+TGG | 0.562807 | 3.3:-9794160 | MS.gene67622:CDS |
| TGGAAGAGCCCAATATTGAA+GGG | 0.562993 | 3.3:-9798150 | MS.gene67622:CDS |
| GGTATGGTGCCATAATATCC+AGG | 0.563962 | 3.3:+9796597 | None:intergenic |
| ATAGGCTAAGAGGTTACGTC+GGG | 0.564123 | 3.3:-9795604 | MS.gene67622:intron |
| GCAAGGGCAACAGCAGGAAG+CGG | 0.564392 | 3.3:-9796824 | MS.gene67622:intron |
| TGAATATGGTGGTAAATGAC+AGG | 0.567121 | 3.3:+9796548 | None:intergenic |
| TTGAAAACTGATAAGGTCAA+CGG | 0.569492 | 3.3:+9799115 | None:intergenic |
| GTAACTTGGCTGCTAACTAC+CGG | 0.570124 | 3.3:-9794204 | MS.gene67622:CDS |
| CTAACCCTTAATCATGGTGA+AGG | 0.570310 | 3.3:-9794154 | MS.gene67622:CDS |
| CAAGGCAAGGGAACATTGGA+TGG | 0.570640 | 3.3:-9799071 | MS.gene67622:CDS |
| AATGTGGTCGAAGAGGGTGG+TGG | 0.572688 | 3.3:-9796381 | MS.gene67622:CDS |
| GGTTAAGTATTGGGCGTCTG+AGG | 0.575914 | 3.3:-9795821 | MS.gene67622:CDS |
| GTAATGACCGAGAAAGTATG+AGG | 0.575940 | 3.3:+9799204 | None:intergenic |
| TAGTGTAGCTGCTCCTGCGA+CGG | 0.577442 | 3.3:-9796661 | MS.gene67622:CDS |
| ATGACAGGTCGGAGGAAGGA+AGG | 0.580994 | 3.3:+9796563 | None:intergenic |
| TGTCTCCTCAAACCACATAC+GGG | 0.582758 | 3.3:+9795888 | None:intergenic |
| AGCAAAGAAGAACCGGGCGT+CGG | 0.582886 | 3.3:-9795776 | MS.gene67622:CDS |
| TTGAACAGGAGGAGTATGAC+CGG | 0.586858 | 3.3:-9794336 | MS.gene67622:intron |
| TGAACTTACGAGTTTCCACT+AGG | 0.589440 | 3.3:+9796288 | None:intergenic |
| GGGCACATGTAAGTGGGATG+AGG | 0.589794 | 3.3:+9796630 | None:intergenic |
| GGATGATGAGGATCATGATG+AGG | 0.590861 | 3.3:-9793894 | MS.gene67622:CDS |
| GAAACCTAATGGAAAGAGCA+AGG | 0.595131 | 3.3:-9796841 | MS.gene67622:CDS |
| GAGAATCTCTCGGATAATCC+GGG | 0.595824 | 3.3:+9796331 | None:intergenic |
| AAGCGGCGCACTAGTGTGGG+AGG | 0.600468 | 3.3:+9793955 | None:intergenic |
| GTATGACCGGCAGCTTGCCG+AGG | 0.601524 | 3.3:-9794323 | MS.gene67622:CDS |
| CGATTCATCTTAAGGCCTAG+TGG | 0.601629 | 3.3:-9796303 | MS.gene67622:CDS |
| CGACAAAGCAAAGAAGAACC+GGG | 0.601764 | 3.3:-9795782 | MS.gene67622:CDS |
| GTAAATGACAGGTCGGAGGA+AGG | 0.602521 | 3.3:+9796559 | None:intergenic |
| AGAGCAATTAACGCAACAGA+TGG | 0.604437 | 3.3:-9794071 | MS.gene67622:CDS |
| ACCTGGTCGCCACTCTGGCA+AGG | 0.605307 | 3.3:-9799089 | MS.gene67622:CDS |
| ACAAGAAAATGTGGTCGAAG+AGG | 0.610168 | 3.3:-9796388 | MS.gene67622:CDS |
| GTTCCCTTGCCTTGCCAGAG+TGG | 0.611779 | 3.3:+9799080 | None:intergenic |
| AAATATTCATGTATGTAACC+AGG | 0.616607 | 3.3:+9798844 | None:intergenic |
| GCGCGATGCACAATTTGAAG+GGG | 0.617740 | 3.3:-9798239 | MS.gene67622:CDS |
| GCCTTATCCGGTAGATGAGG+AGG | 0.618778 | 3.3:-9793915 | MS.gene67622:CDS |
| GAATTTGGTGATGATTCGCC+TGG | 0.619198 | 3.3:-9798862 | MS.gene67622:CDS |
| TAATATCCAGGATGTACTGG+AGG | 0.622903 | 3.3:+9796609 | None:intergenic |
| CTTGGCTGCTAACTACCGGA+AGG | 0.625442 | 3.3:-9794200 | MS.gene67622:CDS |
| CTTCTAGCCAGGGATCACCT+GGG | 0.625749 | 3.3:-9796695 | MS.gene67622:intron |
| GGAAGAGCCCAATATTGAAG+GGG | 0.628569 | 3.3:-9798149 | MS.gene67622:CDS |
| GTTGCTGGAGACAAGAAGAA+GGG | 0.632114 | 3.3:-9794244 | MS.gene67622:CDS |
| AGACATGAACATGAGCTGAT+CGG | 0.632452 | 3.3:+9799032 | None:intergenic |
| TCATGTCTTAATTAATTGCG+CGG | 0.634195 | 3.3:-9799017 | MS.gene67622:CDS |
| AATCGACGACGAGAATCTCT+CGG | 0.634346 | 3.3:+9796321 | None:intergenic |
| TAATGAAGATGAAAATGATG+AGG | 0.634636 | 3.3:-9798185 | MS.gene67622:CDS |
| GGAAGGAAGGTCCCATAAGG+AGG | 0.636273 | 3.3:+9796576 | None:intergenic |
| TGTGGTGGGACTGAATATGG+TGG | 0.638237 | 3.3:+9796537 | None:intergenic |
| GGTAGATGAGGAGGATGATG+AGG | 0.638477 | 3.3:-9793906 | MS.gene67622:CDS |
| AGACCCATTAGAAATAGCCT+CGG | 0.639345 | 3.3:+9794306 | None:intergenic |
| TGAGCCTTATCCGGTAGATG+AGG | 0.639385 | 3.3:-9793918 | MS.gene67622:CDS |
| AAACCTAATGGAAAGAGCAA+GGG | 0.642664 | 3.3:-9796840 | MS.gene67622:CDS |
| ACACTAGCCTGGGAGGACCC+AGG | 0.643294 | 3.3:+9796678 | None:intergenic |
| TATGGTGGTAAATGACAGGT+CGG | 0.644806 | 3.3:+9796552 | None:intergenic |
| TAACCCTTAATCATGGTGAA+GGG | 0.648390 | 3.3:-9794153 | MS.gene67622:CDS |
| GTTGTTTAATGATGTTTACC+CGG | 0.649080 | 3.3:-9796349 | MS.gene67622:CDS |
| ACTGGTGGTTGCTTAAGCAA+CGG | 0.650281 | 3.3:-9795733 | MS.gene67622:CDS |
| TTGGAAGACATATGGTGATG+TGG | 0.652180 | 3.3:-9796133 | MS.gene67622:CDS |
| TCAACATTGGGACTTAAAAG+CGG | 0.654070 | 3.3:+9793938 | None:intergenic |
| AGCGGCGCACTAGTGTGGGA+GGG | 0.654626 | 3.3:+9793956 | None:intergenic |
| AGCAGCTACACTAGCCTGGG+AGG | 0.655945 | 3.3:+9796671 | None:intergenic |
| ACAACCCCAACAAGAAAATG+TGG | 0.656244 | 3.3:-9796397 | MS.gene67622:CDS |
| CGTCAGCTGAGGCTGCTGGG+AGG | 0.658728 | 3.3:+9794129 | None:intergenic |
| TTGGCTGCTAACTACCGGAA+GGG | 0.659168 | 3.3:-9794199 | MS.gene67622:CDS |
| AATAGGCTAAGAGGTTACGT+CGG | 0.659545 | 3.3:-9795605 | MS.gene67622:intron |
| GGAGGATGCATTCACACTGG+TGG | 0.660778 | 3.3:-9795748 | MS.gene67622:CDS |
| GAAAATGTGGTCGAAGAGGG+TGG | 0.661104 | 3.3:-9796384 | MS.gene67622:CDS |
| GCAACAGATGGCAAGTCAAG+CGG | 0.662263 | 3.3:-9794059 | MS.gene67622:CDS |
| AACCGGGCGTCGGAAAAGGG+AGG | 0.663571 | 3.3:-9795766 | MS.gene67622:CDS |
| AAGGGAGGATGCATTCACAC+TGG | 0.674246 | 3.3:-9795751 | MS.gene67622:CDS |
| AATATCCAGGATGTACTGGA+GGG | 0.686056 | 3.3:+9796610 | None:intergenic |
| TGTCTTAATTAATTGCGCGG+AGG | 0.694395 | 3.3:-9799014 | MS.gene67622:CDS |
| GGTGGTAAATGACAGGTCGG+AGG | 0.698796 | 3.3:+9796555 | None:intergenic |
| ACTGGAGGGCACATGTAAGT+GGG | 0.711086 | 3.3:+9796624 | None:intergenic |
| TAGTGGTTGGAACAAGCACA+CGG | 0.716328 | 3.3:+9799173 | None:intergenic |
| ATAGGCAGGCCAATCCAATG+TGG | 0.744808 | 3.3:+9795856 | None:intergenic |
| GGTTTGAGGAGACAAGAAAG+CGG | 0.753420 | 3.3:-9795879 | MS.gene67622:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ACAATCAAAATTAAATGATA+TGG | + | chr3.3:9797513-9797532 | None:intergenic | 15.0% |
| !! | TATTGTTGGATTATTATAAT+TGG | - | chr3.3:9795099-9795118 | MS.gene67622:intron | 15.0% |
| !!! | TAATCTTGTATTTTCATTAA+CGG | + | chr3.3:9795268-9795287 | None:intergenic | 15.0% |
| !!! | TATTTTGTTATTATTTGAAC+AGG | - | chr3.3:9798822-9798841 | MS.gene67622:intron | 15.0% |
| !!! | TCTAACTTTGTTTTTAATTT+TGG | - | chr3.3:9794260-9794279 | MS.gene67622:CDS | 15.0% |
| !!! | TTGTTTTTAATTTTGGTATA+GGG | - | chr3.3:9794267-9794286 | MS.gene67622:CDS | 15.0% |
| !!! | TTTGTTATTGATAAATATCT+AGG | - | chr3.3:9796299-9796318 | MS.gene67622:CDS | 15.0% |
| !!! | TTTGTTTTTAATTTTGGTAT+AGG | - | chr3.3:9794266-9794285 | MS.gene67622:CDS | 15.0% |
| !!! | TTTTGATAATAAACGAAATA+AGG | + | chr3.3:9798732-9798751 | None:intergenic | 15.0% |
| !!! | TTTTTAAGCTAATTTGTTTT+TGG | - | chr3.3:9795937-9795956 | MS.gene67622:CDS | 15.0% |
| !! | AAAACGATCCATTAAAAATA+GGG | - | chr3.3:9793900-9793919 | MS.gene67622:CDS | 20.0% |
| !! | AAACTAAACAACAAAATTTG+AGG | + | chr3.3:9798247-9798266 | None:intergenic | 20.0% |
| !! | AATATAACTAGTTGTGTTTA+AGG | - | chr3.3:9795559-9795578 | MS.gene67622:CDS | 20.0% |
| !! | ATTCCATTAAGTTTCAATTA+TGG | + | chr3.3:9796073-9796092 | None:intergenic | 20.0% |
| !! | ATTTGCAATGTATTTATATG+AGG | - | chr3.3:9796184-9796203 | MS.gene67622:CDS | 20.0% |
| !! | CAGTAAAAATGAAATTGATA+TGG | + | chr3.3:9798473-9798492 | None:intergenic | 20.0% |
| !! | TAATTCATAGTAGTTAATAG+CGG | - | chr3.3:9795197-9795216 | MS.gene67622:intron | 20.0% |
| !! | TCACTATGAAATATATGATT+TGG | - | chr3.3:9797865-9797884 | MS.gene67622:intron | 20.0% |
| !! | TGAAAAATTTGAGAAAAATC+AGG | - | chr3.3:9798382-9798401 | MS.gene67622:intron | 20.0% |
| !! | TTGGTTTAAAAAACAAAACA+AGG | - | chr3.3:9795291-9795310 | MS.gene67622:intron | 20.0% |
| !!! | AATACCTTTTATGAAGAATT+TGG | - | chr3.3:9794295-9794314 | MS.gene67622:CDS | 20.0% |
| !!! | AATTTTAGCCCTATTTTTAA+TGG | + | chr3.3:9793911-9793930 | None:intergenic | 20.0% |
| !!! | ATTTTTTTTAATCCGAATTG+TGG | - | chr3.3:9797768-9797787 | MS.gene67622:intron | 20.0% |
| !!! | GATTATAATTAAGGTATTGT+TGG | - | chr3.3:9795085-9795104 | MS.gene67622:intron | 20.0% |
| !!! | GTGTTTTTGGATTATAATTA+AGG | - | chr3.3:9795076-9795095 | MS.gene67622:intron | 20.0% |
| !!! | TCAAAAAGTATTGAAAAAGT+AGG | + | chr3.3:9796153-9796172 | None:intergenic | 20.0% |
| !!! | TTGTTTTGTTTTTTAAACCA+AGG | + | chr3.3:9795292-9795311 | None:intergenic | 20.0% |
| !!! | TTTTATTTCTTGTGACAAAT+AGG | - | chr3.3:9797550-9797569 | MS.gene67622:intron | 20.0% |
| ! | AAAAATAGGGCTAAAATTGA+AGG | - | chr3.3:9793913-9793932 | MS.gene67622:CDS | 25.0% |
| ! | AAAAGTGGTGTATATGTAAA+AGG | - | chr3.3:9794520-9794539 | MS.gene67622:intron | 25.0% |
| ! | AAATATTCATGTATGTAACC+AGG | + | chr3.3:9794331-9794350 | None:intergenic | 25.0% |
| ! | AACTAATCATAAGCAATAAC+AGG | + | chr3.3:9798708-9798727 | None:intergenic | 25.0% |
| ! | AATATTTAACAGAACTTGCA+AGG | + | chr3.3:9798806-9798825 | None:intergenic | 25.0% |
| ! | AATTTCAGTTAAGCAAAAGT+TGG | + | chr3.3:9797801-9797820 | None:intergenic | 25.0% |
| ! | ACTAATCATAAGCAATAACA+GGG | + | chr3.3:9798707-9798726 | None:intergenic | 25.0% |
| ! | ATAAATTTCATACCCAATCA+TGG | - | chr3.3:9794476-9794495 | MS.gene67622:intron | 25.0% |
| ! | ATCACCAAATTCTTCATAAA+AGG | + | chr3.3:9794302-9794321 | None:intergenic | 25.0% |
| ! | ATCATACATACTTCGTAAAT+GGG | - | chr3.3:9794452-9794471 | MS.gene67622:intron | 25.0% |
| ! | ATTTCAGTTAAGCAAAAGTT+GGG | + | chr3.3:9797800-9797819 | None:intergenic | 25.0% |
| ! | CAAAACGATCCATTAAAAAT+AGG | - | chr3.3:9793899-9793918 | MS.gene67622:CDS | 25.0% |
| ! | CATAATTGAAACTACCATTT+CGG | - | chr3.3:9795854-9795873 | MS.gene67622:CDS | 25.0% |
| ! | CTCAAATATACAACACAATA+TGG | + | chr3.3:9796102-9796121 | None:intergenic | 25.0% |
| ! | TAAGACTTATGATAAAACTC+TGG | + | chr3.3:9798319-9798338 | None:intergenic | 25.0% |
| ! | TAATGAAGATGAAAATGATG+AGG | - | chr3.3:9794987-9795006 | MS.gene67622:intron | 25.0% |
| ! | TATCATACATACTTCGTAAA+TGG | - | chr3.3:9794451-9794470 | MS.gene67622:intron | 25.0% |
| ! | TGAAAATACAAGATTATCCT+TGG | - | chr3.3:9795272-9795291 | MS.gene67622:intron | 25.0% |
| ! | TGATGAATTGGTTAAGTATT+GGG | - | chr3.3:9797342-9797361 | MS.gene67622:intron | 25.0% |
| ! | TGTATATGTAAAAGGAGTTA+CGG | - | chr3.3:9794528-9794547 | MS.gene67622:intron | 25.0% |
| ! | TTAACCAATTCATCAAAGAT+AGG | + | chr3.3:9797337-9797356 | None:intergenic | 25.0% |
| ! | TTGATGAATTGGTTAAGTAT+TGG | - | chr3.3:9797341-9797360 | MS.gene67622:intron | 25.0% |
| ! | TTGCCATAATTGAAACTTAA+TGG | - | chr3.3:9796067-9796086 | MS.gene67622:intron | 25.0% |
| !! | AAAACAAAACAAGGCTATTT+TGG | - | chr3.3:9795300-9795319 | MS.gene67622:intron | 25.0% |
| !! | ACTTTTGCTTAACTGAAATT+TGG | - | chr3.3:9797801-9797820 | MS.gene67622:intron | 25.0% |
| !! | ATTTTACAATCAGGATAAAG+TGG | - | chr3.3:9794600-9794619 | MS.gene67622:intron | 25.0% |
| !! | TACATACATGAATATTTTCC+TGG | - | chr3.3:9794334-9794353 | MS.gene67622:intron | 25.0% |
| !! | TCATCATTTTCATCTTCATT+AGG | + | chr3.3:9794988-9795007 | None:intergenic | 25.0% |
| !!! | GATATGATGTTTTTTACTAC+TGG | - | chr3.3:9796226-9796245 | MS.gene67622:intron | 25.0% |
| !!! | GCTTTTTGAAAGAATAGAAA+AGG | - | chr3.3:9798431-9798450 | MS.gene67622:intron | 25.0% |
| !!! | TTACGAGTTATTTTACAATC+AGG | - | chr3.3:9794591-9794610 | MS.gene67622:intron | 25.0% |
| !!! | TTTGTTATTATTTGAACAGG+AGG | - | chr3.3:9798825-9798844 | MS.gene67622:intron | 25.0% |
| !!! | TTTTGTTTTATACTCACTCA+AGG | + | chr3.3:9794194-9794213 | None:intergenic | 25.0% |
| AAAGTCGATTAAAATTACCG+CGG | + | chr3.3:9798663-9798682 | None:intergenic | 30.0% | |
| AAGACTCATAAGTCAACATT+AGG | + | chr3.3:9798618-9798637 | None:intergenic | 30.0% | |
| AATAACAGAGAAACAGTGTA+AGG | + | chr3.3:9798781-9798800 | None:intergenic | 30.0% | |
| ACATTATGTGCCATGATAAA+CGG | + | chr3.3:9794733-9794752 | None:intergenic | 30.0% | |
| ACTATAATAGTGTGTTCTCT+AGG | - | chr3.3:9795467-9795486 | MS.gene67622:intron | 30.0% | |
| AGGTAGATTGAAAACTGATA+AGG | + | chr3.3:9794067-9794086 | None:intergenic | 30.0% | |
| ATAAACTTCATTTCGTGTAG+TGG | + | chr3.3:9794019-9794038 | None:intergenic | 30.0% | |
| ATATATTTCATAGTGAAGCC+TGG | + | chr3.3:9797861-9797880 | None:intergenic | 30.0% | |
| ATGATAGCAGTTATGAATGA+TGG | + | chr3.3:9797014-9797033 | None:intergenic | 30.0% | |
| CATTACATAGCTCAATTCTT+CGG | + | chr3.3:9798539-9798558 | None:intergenic | 30.0% | |
| CGAAATGGTAGTTTCAATTA+TGG | + | chr3.3:9795856-9795875 | None:intergenic | 30.0% | |
| CTAAGTCTGATTGATATCAT+TGG | - | chr3.3:9795705-9795724 | MS.gene67622:intron | 30.0% | |
| GAAAATGATGAGGATAATGT+TGG | - | chr3.3:9794997-9795016 | MS.gene67622:intron | 30.0% | |
| GAAGTATGTATGATATTCAG+TGG | + | chr3.3:9794446-9794465 | None:intergenic | 30.0% | |
| GATCAAATACTTCGTTTAAG+AGG | - | chr3.3:9794394-9794413 | MS.gene67622:intron | 30.0% | |
| GGTTTCTGTCATAAAAATTG+AGG | - | chr3.3:9798209-9798228 | MS.gene67622:CDS | 30.0% | |
| GTAAGAATGAAGGAAAGAAA+AGG | + | chr3.3:9795361-9795380 | None:intergenic | 30.0% | |
| GTTGTTTAATGATGTTTACC+CGG | - | chr3.3:9796823-9796842 | MS.gene67622:intron | 30.0% | |
| TAAACACAAACTGAGAACTA+GGG | + | chr3.3:9795426-9795445 | None:intergenic | 30.0% | |
| TCATGTCTTAATTAATTGCG+CGG | - | chr3.3:9794155-9794174 | MS.gene67622:CDS | 30.0% | |
| TGCAATCAAAACAAAACCAA+GGG | - | chr3.3:9794813-9794832 | MS.gene67622:intron | 30.0% | |
| TGTGAATTATGATCGATTGT+TGG | - | chr3.3:9798269-9798288 | MS.gene67622:intron | 30.0% | |
| TGTTGTTGAATTTCTCTGAT+TGG | - | chr3.3:9798491-9798510 | MS.gene67622:intron | 30.0% | |
| TTAAACACAAACTGAGAACT+AGG | + | chr3.3:9795427-9795446 | None:intergenic | 30.0% | |
| TTATCATGGCACATAATGTT+AGG | - | chr3.3:9794734-9794753 | MS.gene67622:intron | 30.0% | |
| TTATGATAAAACTCTGGTGA+GGG | + | chr3.3:9798313-9798332 | None:intergenic | 30.0% | |
| TTGAAAACTGATAAGGTCAA+CGG | + | chr3.3:9794060-9794079 | None:intergenic | 30.0% | |
| TTGCAATCAAAACAAAACCA+AGG | - | chr3.3:9794812-9794831 | MS.gene67622:intron | 30.0% | |
| TTTCAGTTAAGCAAAAGTTG+GGG | + | chr3.3:9797799-9797818 | None:intergenic | 30.0% | |
| ! | ACATGCTTGATAACTAACAA+AGG | - | chr3.3:9795973-9795992 | MS.gene67622:CDS | 30.0% |
| ! | ATAACTGCTATCATCACTTT+TGG | - | chr3.3:9797020-9797039 | MS.gene67622:intron | 30.0% |
| ! | ATGATAATGAAAAAGAGCGT+TGG | - | chr3.3:9797062-9797081 | MS.gene67622:intron | 30.0% |
| ! | CTCTTGTTCTAGATATGATT+TGG | - | chr3.3:9797830-9797849 | MS.gene67622:intron | 30.0% |
| ! | TACATGAATATTTTCCTGGT+TGG | - | chr3.3:9794338-9794357 | MS.gene67622:intron | 30.0% |
| ! | TGATTTCTTAGTTAGCTTAC+AGG | - | chr3.3:9795531-9795550 | MS.gene67622:CDS | 30.0% |
| ! | TTATCAGTTTTCAATCTACC+TGG | - | chr3.3:9794066-9794085 | MS.gene67622:CDS | 30.0% |
| ! | TTTGATGATACGAAACTGAA+CGG | - | chr3.3:9797959-9797978 | MS.gene67622:intron | 30.0% |
| ! | TTTTATACTCACTCAAGGTA+TGG | + | chr3.3:9794189-9794208 | None:intergenic | 30.0% |
| ! | TTTTCATTAACGGTACATAG+CGG | + | chr3.3:9795258-9795277 | None:intergenic | 30.0% |
| !! | ACTTTTTGTTTAAACCAACC+AGG | + | chr3.3:9794355-9794374 | None:intergenic | 30.0% |
| !! | ATGATTAAGGGTTAGTCTTA+GGG | + | chr3.3:9799013-9799032 | None:intergenic | 30.0% |
| !!! | AACTTTTTTCCAAGTGTTGA+AGG | + | chr3.3:9798911-9798930 | None:intergenic | 30.0% |
| !!! | CAAGTCAATGAAAGTGTTTT+TGG | - | chr3.3:9795063-9795082 | MS.gene67622:intron | 30.0% |
| !!! | GTGAACAATTTTTTTGACTC+TGG | - | chr3.3:9795671-9795690 | MS.gene67622:intron | 30.0% |
| !!! | TACTACTGGTTTTTTACTAC+TGG | - | chr3.3:9796261-9796280 | MS.gene67622:intron | 30.0% |
| !!! | TGAGCAATTTTTTTTGACTC+TGG | - | chr3.3:9795620-9795639 | MS.gene67622:intron | 30.0% |
| !!! | TGGTGTTATTTTATTGTGAC+TGG | - | chr3.3:9794620-9794639 | MS.gene67622:intron | 30.0% |
| AAACCTAATGGAAAGAGCAA+GGG | - | chr3.3:9796332-9796351 | MS.gene67622:CDS | 35.0% | |
| AACACTTGGAAAAAAGTTGC+TGG | - | chr3.3:9798913-9798932 | MS.gene67622:intron | 35.0% | |
| AACATCATATCAGCTCAAAG+TGG | + | chr3.3:9796217-9796236 | None:intergenic | 35.0% | |
| AACCTACTGCCTTAATTGTA+TGG | - | chr3.3:9798157-9798176 | MS.gene67622:CDS | 35.0% | |
| AAGAAGAAGGGAAAGCTATA+CGG | - | chr3.3:9798940-9798959 | MS.gene67622:intron | 35.0% | |
| AAGGAAACCTCATACTTTCT+CGG | - | chr3.3:9793961-9793980 | MS.gene67622:CDS | 35.0% | |
| AATGAAGACCAAGTGTTCTT+GGG | - | chr3.3:9797183-9797202 | MS.gene67622:intron | 35.0% | |
| AATGACAAACAAGACAGAAC+AGG | + | chr3.3:9797742-9797761 | None:intergenic | 35.0% | |
| ACATCATATCAGCTCAAAGT+GGG | + | chr3.3:9796216-9796235 | None:intergenic | 35.0% | |
| AGCATCAGACCATACAATTA+AGG | + | chr3.3:9798169-9798188 | None:intergenic | 35.0% | |
| ATCTCAAGAGTTGCATCTTT+AGG | + | chr3.3:9798344-9798363 | None:intergenic | 35.0% | |
| ATTCTTTGACCTTCAACACT+TGG | - | chr3.3:9798899-9798918 | MS.gene67622:intron | 35.0% | |
| ATTTGCTCAACTTCATCAGT+TGG | + | chr3.3:9794859-9794878 | None:intergenic | 35.0% | |
| CGAAGAATTGAGCTATGTAA+TGG | - | chr3.3:9798537-9798556 | MS.gene67622:intron | 35.0% | |
| CTAAGACTAACCCTTAATCA+TGG | - | chr3.3:9799012-9799031 | MS.gene67622:CDS | 35.0% | |
| CTTATGATAAAACTCTGGTG+AGG | + | chr3.3:9798314-9798333 | None:intergenic | 35.0% | |
| GAAACGCACAAAAATAAGTC+TGG | - | chr3.3:9797617-9797636 | MS.gene67622:intron | 35.0% | |
| GCAATCAAAACAAAACCAAG+GGG | - | chr3.3:9794814-9794833 | MS.gene67622:intron | 35.0% | |
| GGGAAGAAGACATATAAAAG+TGG | - | chr3.3:9794505-9794524 | MS.gene67622:intron | 35.0% | |
| GTCTGATTGATATCATTGGT+TGG | - | chr3.3:9795709-9795728 | MS.gene67622:intron | 35.0% | |
| TAACCCTTAATCATGGTGAA+GGG | - | chr3.3:9799019-9799038 | MS.gene67622:CDS | 35.0% | |
| TAATGAAGACCAAGTGTTCT+TGG | - | chr3.3:9797182-9797201 | MS.gene67622:intron | 35.0% | |
| TATGTAAAAGGAGTTACGGA+AGG | - | chr3.3:9794532-9794551 | MS.gene67622:intron | 35.0% | |
| TCAACATTGGGACTTAAAAG+CGG | + | chr3.3:9799237-9799256 | None:intergenic | 35.0% | |
| TCGTGAAGCTCGTTAATAAA+TGG | + | chr3.3:9797596-9797615 | None:intergenic | 35.0% | |
| TGAAAACTGATAAGGTCAAC+GGG | + | chr3.3:9794059-9794078 | None:intergenic | 35.0% | |
| TGAATATGGTGGTAAATGAC+AGG | + | chr3.3:9796627-9796646 | None:intergenic | 35.0% | |
| TGAGATAATTGAAGTTGAGC+CGG | - | chr3.3:9794900-9794919 | MS.gene67622:intron | 35.0% | |
| TGTGTATGATCCGTTTATCA+TGG | - | chr3.3:9794720-9794739 | MS.gene67622:intron | 35.0% | |
| TTAGGAGTTAACAAAACAGC+AGG | + | chr3.3:9794970-9794989 | None:intergenic | 35.0% | |
| TTGCTCTTTCCATTAGGTTT+CGG | + | chr3.3:9796332-9796351 | None:intergenic | 35.0% | |
| ! | AAACGAAGTATTTGATCCGT+TGG | + | chr3.3:9794391-9794410 | None:intergenic | 35.0% |
| ! | AAGATTTGCTTAACCGTCAA+AGG | - | chr3.3:9799145-9799164 | MS.gene67622:CDS | 35.0% |
| ! | AAGTATTTGATCCGTTGGTT+CGG | + | chr3.3:9794386-9794405 | None:intergenic | 35.0% |
| ! | AGTTGTGTTTAAGGTTCTCT+AGG | - | chr3.3:9795568-9795587 | MS.gene67622:CDS | 35.0% |
| ! | CTTGATAACTAACAAAGGTG+AGG | - | chr3.3:9795978-9795997 | MS.gene67622:CDS | 35.0% |
| ! | CTTGTCTTATCTCTCAGTTT+TGG | - | chr3.3:9797679-9797698 | MS.gene67622:intron | 35.0% |
| ! | GGTTTGAGTCTTTTTACTAC+TGG | - | chr3.3:9796247-9796266 | MS.gene67622:intron | 35.0% |
| ! | GTAGGAATAGCTAAGAGTAT+TGG | - | chr3.3:9798105-9798124 | MS.gene67622:intron | 35.0% |
| ! | TGATGAGGATAATGTTGGTT+TGG | - | chr3.3:9795002-9795021 | MS.gene67622:intron | 35.0% |
| ! | TTCGACCACATTTTCTTGTT+GGG | + | chr3.3:9796783-9796802 | None:intergenic | 35.0% |
| ! | TTTTAATCCGAATTGTGGTC+TGG | - | chr3.3:9797773-9797792 | MS.gene67622:intron | 35.0% |
| !! | ATGAAAAAGAGCGTTGGTTT+AGG | - | chr3.3:9797068-9797087 | MS.gene67622:intron | 35.0% |
| !! | ATTTGTTGTTGGGAAAAAGG+TGG | + | chr3.3:9796707-9796726 | None:intergenic | 35.0% |
| !! | CATCACTTTTGGAAGACATA+TGG | - | chr3.3:9797031-9797050 | MS.gene67622:intron | 35.0% |
| !! | CATGATTAAGGGTTAGTCTT+AGG | + | chr3.3:9799014-9799033 | None:intergenic | 35.0% |
| !! | CGACTTTGTTGATTCTTACA+AGG | - | chr3.3:9798676-9798695 | MS.gene67622:intron | 35.0% |
| !! | CTGTGCTATTTACGTTCATA+AGG | - | chr3.3:9793942-9793961 | MS.gene67622:CDS | 35.0% |
| !! | GTTCTGTCTTGTTTGTCATT+TGG | - | chr3.3:9797742-9797761 | MS.gene67622:intron | 35.0% |
| !! | TTGTTCATTTTTGTCCACCT+AGG | + | chr3.3:9794658-9794677 | None:intergenic | 35.0% |
| !! | TTTGTTGTTGGGAAAAAGGT+GGG | + | chr3.3:9796706-9796725 | None:intergenic | 35.0% |
| !!! | GCACTATTTTTGTTGCAGTT+TGG | - | chr3.3:9797714-9797733 | MS.gene67622:intron | 35.0% |
| AAGCACTCTCTAGTAACAAC+AGG | + | chr3.3:9795919-9795938 | None:intergenic | 40.0% | |
| AAGGAAAGCTGAAGCTTTCT+AGG | + | chr3.3:9795342-9795361 | None:intergenic | 40.0% | |
| AATAGGCTAAGAGGTTACGT+CGG | - | chr3.3:9797567-9797586 | MS.gene67622:intron | 40.0% | |
| AATATCCAGGATGTACTGGA+GGG | + | chr3.3:9796565-9796584 | None:intergenic | 40.0% | |
| ACAACCCCAACAAGAAAATG+TGG | - | chr3.3:9796775-9796794 | MS.gene67622:intron | 40.0% | |
| ACAAGAAAATGTGGTCGAAG+AGG | - | chr3.3:9796784-9796803 | MS.gene67622:intron | 40.0% | |
| ACAATTAAGGCAGTAGGTTC+TGG | + | chr3.3:9798156-9798175 | None:intergenic | 40.0% | |
| ACTTCATTTCGTGTAGTGGT+TGG | + | chr3.3:9794015-9794034 | None:intergenic | 40.0% | |
| AGACATGAACATGAGCTGAT+CGG | + | chr3.3:9794143-9794162 | None:intergenic | 40.0% | |
| AGACCCATTAGAAATAGCCT+CGG | + | chr3.3:9798869-9798888 | None:intergenic | 40.0% | |
| AGAGCAATTAACGCAACAGA+TGG | - | chr3.3:9799101-9799120 | MS.gene67622:CDS | 40.0% | |
| AGGAAAGCTGAAGCTTTCTA+GGG | + | chr3.3:9795341-9795360 | None:intergenic | 40.0% | |
| AGTATTCGATACCGAACCAA+CGG | - | chr3.3:9794372-9794391 | MS.gene67622:intron | 40.0% | |
| ATCATATCAGCTCAAAGTGG+GGG | + | chr3.3:9796214-9796233 | None:intergenic | 40.0% | |
| ATCCAGATCCCCTTCAATAT+TGG | + | chr3.3:9795034-9795053 | None:intergenic | 40.0% | |
| CAAGAAAATGTGGTCGAAGA+GGG | - | chr3.3:9796785-9796804 | MS.gene67622:intron | 40.0% | |
| CAATTAAGGCAGTAGGTTCT+GGG | + | chr3.3:9798155-9798174 | None:intergenic | 40.0% | |
| CATCATATCAGCTCAAAGTG+GGG | + | chr3.3:9796215-9796234 | None:intergenic | 40.0% | |
| CCAATTCATCAAAGATAGGC+AGG | + | chr3.3:9797333-9797352 | None:intergenic | 40.0% | |
| CCAGTACATCCTGGATATTA+TGG | - | chr3.3:9796566-9796585 | MS.gene67622:CDS | 40.0% | |
| CCATAATATCCAGGATGTAC+TGG | + | chr3.3:9796569-9796588 | None:intergenic | 40.0% | |
| CCTGCCTATCTTTGATGAAT+TGG | - | chr3.3:9797330-9797349 | MS.gene67622:intron | 40.0% | |
| CTAACCCTTAATCATGGTGA+AGG | - | chr3.3:9799018-9799037 | MS.gene67622:CDS | 40.0% | |
| CTTGTGACAAATAGGCTAAG+AGG | - | chr3.3:9797558-9797577 | MS.gene67622:intron | 40.0% | |
| GAAACCTAATGGAAAGAGCA+AGG | - | chr3.3:9796331-9796350 | MS.gene67622:CDS | 40.0% | |
| GACCATACAATTAAGGCAGT+AGG | + | chr3.3:9798162-9798181 | None:intergenic | 40.0% | |
| GCGGTAAAATACTCACTTAG+TGG | - | chr3.3:9796367-9796386 | MS.gene67622:CDS | 40.0% | |
| GTCTCATTCTCACAATCAAG+CGG | - | chr3.3:9795386-9795405 | MS.gene67622:intron | 40.0% | |
| GTCTGTAACAAGCTTAAGTG+TGG | - | chr3.3:9797912-9797931 | MS.gene67622:intron | 40.0% | |
| TAAATCCGAAAAACGTGCAG+CGG | + | chr3.3:9797254-9797273 | None:intergenic | 40.0% | |
| TAACCGTCAAAGGTCATATG+AGG | - | chr3.3:9799155-9799174 | MS.gene67622:CDS | 40.0% | |
| TAATATCCAGGATGTACTGG+AGG | + | chr3.3:9796566-9796585 | None:intergenic | 40.0% | |
| TATGGTGGTAAATGACAGGT+CGG | + | chr3.3:9796623-9796642 | None:intergenic | 40.0% | |
| TATTCAGTGGCACACTGTAA+AGG | + | chr3.3:9794433-9794452 | None:intergenic | 40.0% | |
| TCCAGATCCCCTTCAATATT+GGG | + | chr3.3:9795033-9795052 | None:intergenic | 40.0% | |
| TGAACTTACGAGTTTCCACT+AGG | + | chr3.3:9796887-9796906 | None:intergenic | 40.0% | |
| TGGAAGAGCCCAATATTGAA+GGG | - | chr3.3:9795022-9795041 | MS.gene67622:intron | 40.0% | |
| TGTCTTAATTAATTGCGCGG+AGG | - | chr3.3:9794158-9794177 | MS.gene67622:CDS | 40.0% | |
| TTAAAATTACCGCGGACAGA+TGG | + | chr3.3:9798655-9798674 | None:intergenic | 40.0% | |
| TTGGAAGAGCCCAATATTGA+AGG | - | chr3.3:9795021-9795040 | MS.gene67622:intron | 40.0% | |
| TTGTCTCCTCAAACCACATA+CGG | + | chr3.3:9797288-9797307 | None:intergenic | 40.0% | |
| ! | ACATTTTCTTGTTGGGGTTG+TGG | + | chr3.3:9796776-9796795 | None:intergenic | 40.0% |
| ! | CGTTTAAGAGGTTTAGCTCA+AGG | - | chr3.3:9794406-9794425 | MS.gene67622:intron | 40.0% |
| ! | CTTCGACCACATTTTCTTGT+TGG | + | chr3.3:9796784-9796803 | None:intergenic | 40.0% |
| ! | GTAATGACCGAGAAAGTATG+AGG | + | chr3.3:9793971-9793990 | None:intergenic | 40.0% |
| ! | TCGACCACATTTTCTTGTTG+GGG | + | chr3.3:9796782-9796801 | None:intergenic | 40.0% |
| ! | TGTGGTAAGCTTTAGCTCAA+GGG | - | chr3.3:9797930-9797949 | MS.gene67622:intron | 40.0% |
| ! | TTGGAAGACATATGGTGATG+TGG | - | chr3.3:9797039-9797058 | MS.gene67622:intron | 40.0% |
| !! | AGAGTATTGGCTCCAAAAGT+TGG | - | chr3.3:9798118-9798137 | MS.gene67622:intron | 40.0% |
| !! | ATTTGTTGTTGTTGGGGAAG+GGG | + | chr3.3:9796668-9796687 | None:intergenic | 40.0% |
| !! | GAGTATTGGCTCCAAAAGTT+GGG | - | chr3.3:9798119-9798138 | MS.gene67622:CDS | 40.0% |
| !! | GATTTGTTGTTGTTGGGGAA+GGG | + | chr3.3:9796669-9796688 | None:intergenic | 40.0% |
| !! | GGGATTTGTTGTTGGGAAAA+AGG | + | chr3.3:9796710-9796729 | None:intergenic | 40.0% |
| !! | TGGAGGGATTTGTTGTTGTT+GGG | + | chr3.3:9796675-9796694 | None:intergenic | 40.0% |
| !! | TTGCCGAGGCTATTTCTAAT+GGG | - | chr3.3:9798863-9798882 | MS.gene67622:CDS | 40.0% |
| !! | TTGTGGAGGGATTTGTTGTT+GGG | + | chr3.3:9796717-9796736 | None:intergenic | 40.0% |
| !! | TTTTGTGGTGGGACTGAATA+TGG | + | chr3.3:9796641-9796660 | None:intergenic | 40.0% |
| !!! | TGGTGGGTTTTGTTGTTGTT+GGG | + | chr3.3:9796756-9796775 | None:intergenic | 40.0% |
| !!! | TTTTGTTGTTGTTGGGGAAC+AGG | + | chr3.3:9796749-9796768 | None:intergenic | 40.0% |
| AAGGGAAAGCTATACGGTCT+TGG | - | chr3.3:9798946-9798965 | MS.gene67622:intron | 45.0% | |
| AATCGACGACGAGAATCTCT+CGG | + | chr3.3:9796854-9796873 | None:intergenic | 45.0% | |
| ACCGGATAAGGCTCAACATT+GGG | + | chr3.3:9799249-9799268 | None:intergenic | 45.0% | |
| ACTGGTGGTTGCTTAAGCAA+CGG | - | chr3.3:9797439-9797458 | MS.gene67622:intron | 45.0% | |
| AGCGAAGCAACGATACATAG+CGG | - | chr3.3:9795225-9795244 | MS.gene67622:intron | 45.0% | |
| AGGACCCTTCACCATGATTA+AGG | + | chr3.3:9799026-9799045 | None:intergenic | 45.0% | |
| AGTTGCTGGAGACAAGAAGA+AGG | - | chr3.3:9798927-9798946 | MS.gene67622:intron | 45.0% | |
| ATACCCAATCATGGAGTGAG+GGG | - | chr3.3:9794485-9794504 | MS.gene67622:intron | 45.0% | |
| ATAGGCTAAGAGGTTACGTC+GGG | - | chr3.3:9797568-9797587 | MS.gene67622:intron | 45.0% | |
| ATCTTCTGCATCTTCTAGCC+AGG | - | chr3.3:9796466-9796485 | MS.gene67622:CDS | 45.0% | |
| ATGGCACCATACCTCCTTAT+GGG | - | chr3.3:9796585-9796604 | MS.gene67622:CDS | 45.0% | |
| ATTGAAGGGGATCTGGATGA+AGG | - | chr3.3:9795036-9795055 | MS.gene67622:intron | 45.0% | |
| ATTGAAGTTGAGCCGGTTAC+AGG | - | chr3.3:9794907-9794926 | MS.gene67622:intron | 45.0% | |
| CAGTAGAAATGACAGGCATC+GGG | + | chr3.3:9796418-9796437 | None:intergenic | 45.0% | |
| CATACCCAATCATGGAGTGA+GGG | - | chr3.3:9794484-9794503 | MS.gene67622:intron | 45.0% | |
| CCACAATGTTGACATTCGAG+TGG | - | chr3.3:9794684-9794703 | MS.gene67622:intron | 45.0% | |
| CCACTCGAATGTCAACATTG+TGG | + | chr3.3:9794687-9794706 | None:intergenic | 45.0% | |
| CCGACAAAGCAAAGAAGAAC+CGG | - | chr3.3:9797389-9797408 | MS.gene67622:intron | 45.0% | |
| CCGGTTCTTCTTTGCTTTGT+CGG | + | chr3.3:9797392-9797411 | None:intergenic | 45.0% | |
| CGACAAAGCAAAGAAGAACC+GGG | - | chr3.3:9797390-9797409 | MS.gene67622:intron | 45.0% | |
| CGAGAATCTCTCGGATAATC+CGG | + | chr3.3:9796845-9796864 | None:intergenic | 45.0% | |
| CGATTCATCTTAAGGCCTAG+TGG | - | chr3.3:9796869-9796888 | MS.gene67622:intron | 45.0% | |
| CTCTTTCCATTAGGTTTCGG+AGG | + | chr3.3:9796329-9796348 | None:intergenic | 45.0% | |
| GAGAACTAGGGTTTGATGAG+AGG | + | chr3.3:9795414-9795433 | None:intergenic | 45.0% | |
| GAGAATCTCTCGGATAATCC+GGG | + | chr3.3:9796844-9796863 | None:intergenic | 45.0% | |
| GAGACGCGTTGTAAGAATGA+AGG | + | chr3.3:9795371-9795390 | None:intergenic | 45.0% | |
| GATAAAACTCTGGTGAGGGA+AGG | + | chr3.3:9798309-9798328 | None:intergenic | 45.0% | |
| GCAGTAGAAATGACAGGCAT+CGG | + | chr3.3:9796419-9796438 | None:intergenic | 45.0% | |
| GCTCCTCATATGACCTTTGA+CGG | + | chr3.3:9799161-9799180 | None:intergenic | 45.0% | |
| GGAAGAGCCCAATATTGAAG+GGG | - | chr3.3:9795023-9795042 | MS.gene67622:intron | 45.0% | |
| GGACCCTTCACCATGATTAA+GGG | + | chr3.3:9799025-9799044 | None:intergenic | 45.0% | |
| GGATGATGAGGATCATGATG+AGG | - | chr3.3:9799278-9799297 | MS.gene67622:CDS | 45.0% | |
| GGTTTGAGGAGACAAGAAAG+CGG | - | chr3.3:9797293-9797312 | MS.gene67622:intron | 45.0% | |
| GTAAAAGGAGTTACGGAAGG+AGG | - | chr3.3:9794535-9794554 | MS.gene67622:intron | 45.0% | |
| GTAACTTGGCTGCTAACTAC+CGG | - | chr3.3:9798968-9798987 | MS.gene67622:intron | 45.0% | |
| GTAGACGCAGTAGAAATGAC+AGG | + | chr3.3:9796425-9796444 | None:intergenic | 45.0% | |
| GTTGCTGGAGACAAGAAGAA+GGG | - | chr3.3:9798928-9798947 | MS.gene67622:intron | 45.0% | |
| TACCGGATAAGGCTCAACAT+TGG | + | chr3.3:9799250-9799269 | None:intergenic | 45.0% | |
| TACTTAGAAGAGCCCGTATG+TGG | - | chr3.3:9797272-9797291 | MS.gene67622:intron | 45.0% | |
| TAGTGGTTGGAACAAGCACA+CGG | + | chr3.3:9794002-9794021 | None:intergenic | 45.0% | |
| TATGGCACCATACCTCCTTA+TGG | - | chr3.3:9796584-9796603 | MS.gene67622:CDS | 45.0% | |
| TCATACCCAATCATGGAGTG+AGG | - | chr3.3:9794483-9794502 | MS.gene67622:intron | 45.0% | |
| TCATCATCCTCCTCATCTAC+CGG | + | chr3.3:9799267-9799286 | None:intergenic | 45.0% | |
| TCTTCTGCATCTTCTAGCCA+GGG | - | chr3.3:9796467-9796486 | MS.gene67622:CDS | 45.0% | |
| TGAGCTGATCGGTACTCTTT+CGG | + | chr3.3:9794132-9794151 | None:intergenic | 45.0% | |
| TGTCTCCTCAAACCACATAC+GGG | + | chr3.3:9797287-9797306 | None:intergenic | 45.0% | |
| TGTGAGGACAGATCATGGTT+CGG | - | chr3.3:9795888-9795907 | MS.gene67622:CDS | 45.0% | |
| TTCTCTGTGAGGACAGATCA+TGG | - | chr3.3:9795883-9795902 | MS.gene67622:CDS | 45.0% | |
| TTGATGCAACACTACCCTTC+CGG | + | chr3.3:9798990-9799009 | None:intergenic | 45.0% | |
| TTGCCCTTGCTCTTTCCATT+AGG | + | chr3.3:9796338-9796357 | None:intergenic | 45.0% | |
| TTGTGATATCAGCAGCAACG+AGG | + | chr3.3:9798563-9798582 | None:intergenic | 45.0% | |
| TTTCATAGTGAAGCCTGGCA+AGG | + | chr3.3:9797856-9797875 | None:intergenic | 45.0% | |
| TTTCTTGTTGGGGTTGTGGT+GGG | + | chr3.3:9796772-9796791 | None:intergenic | 45.0% | |
| ! | ATTGGCTCCAAAAGTTGGGT+GGG | - | chr3.3:9798123-9798142 | MS.gene67622:CDS | 45.0% |
| ! | ATTTTTGTCCACCTAGGCGA+GGG | + | chr3.3:9794652-9794671 | None:intergenic | 45.0% |
| ! | CAGCTTTTTGCCTTCCAAAC+CGG | - | chr3.3:9796970-9796989 | MS.gene67622:intron | 45.0% |
| ! | GACATTTCCCACCCAACTTT+TGG | + | chr3.3:9798133-9798152 | None:intergenic | 45.0% |
| ! | GCTATACGGTCTTGGTAACT+TGG | - | chr3.3:9798954-9798973 | MS.gene67622:intron | 45.0% |
| ! | GTGTGGTAAGCTTTAGCTCA+AGG | - | chr3.3:9797929-9797948 | MS.gene67622:intron | 45.0% |
| ! | TCCCAATGTTGAGCCTTATC+CGG | - | chr3.3:9799245-9799264 | MS.gene67622:CDS | 45.0% |
| ! | TTGAACAGGAGGAGTATGAC+CGG | - | chr3.3:9798836-9798855 | MS.gene67622:intron | 45.0% |
| ! | TTTTCTTGTTGGGGTTGTGG+TGG | + | chr3.3:9796773-9796792 | None:intergenic | 45.0% |
| !! | ACAGAGAAGAAGCACCGAAA+TGG | + | chr3.3:9795871-9795890 | None:intergenic | 45.0% |
| !! | AGATATGATTTGGCCTTGCC+AGG | - | chr3.3:9797840-9797859 | MS.gene67622:intron | 45.0% |
| !! | CTCGTCGTCGATTCATCTTA+AGG | - | chr3.3:9796861-9796880 | MS.gene67622:intron | 45.0% |
| !! | CTTGCCGAGGCTATTTCTAA+TGG | - | chr3.3:9798862-9798881 | MS.gene67622:CDS | 45.0% |
| !! | GAAAAAGGTGGGTTTTGTGG+TGG | + | chr3.3:9796695-9796714 | None:intergenic | 45.0% |
| !! | GAATTTGGTGATGATTCGCC+TGG | - | chr3.3:9794310-9794329 | MS.gene67622:CDS | 45.0% |
| !! | GGAGGGATTTGTTGTTGTTG+GGG | + | chr3.3:9796674-9796693 | None:intergenic | 45.0% |
| !! | GGATTTGTTGTTGTTGGGGA+AGG | + | chr3.3:9796670-9796689 | None:intergenic | 45.0% |
| !! | GGTATGGTGCCATAATATCC+AGG | + | chr3.3:9796578-9796597 | None:intergenic | 45.0% |
| !! | GTGGAGGGATTTGTTGTTGT+TGG | + | chr3.3:9796676-9796695 | None:intergenic | 45.0% |
| !! | GTTGCAGCTCATAGTCTTGT+AGG | - | chr3.3:9798087-9798106 | MS.gene67622:intron | 45.0% |
| !! | GTTGTGGAGGGATTTGTTGT+TGG | + | chr3.3:9796718-9796737 | None:intergenic | 45.0% |
| !! | TATTGGCTCCAAAAGTTGGG+TGG | - | chr3.3:9798122-9798141 | MS.gene67622:CDS | 45.0% |
| !! | TGGGAAAAAGGTGGGTTTTG+TGG | + | chr3.3:9796698-9796717 | None:intergenic | 45.0% |
| !!! | GGTGGGTTTTGTTGTTGTTG+GGG | + | chr3.3:9796755-9796774 | None:intergenic | 45.0% |
| !!! | GTGGTGGGTTTTGTTGTTGT+TGG | + | chr3.3:9796757-9796776 | None:intergenic | 45.0% |
| !! | AACTTAATAAATAATATAAT+GGG | + | chr3.3:9794232-9794251 | None:intergenic | 5.0% |
| !! | TAACTTAATAAATAATATAA+TGG | + | chr3.3:9794233-9794252 | None:intergenic | 5.0% |
| AAGAGCCCGTATGTGGTTTG+AGG | - | chr3.3:9797279-9797298 | MS.gene67622:intron | 50.0% | |
| AAGGGAGGATGCATTCACAC+TGG | - | chr3.3:9797421-9797440 | MS.gene67622:intron | 50.0% | |
| AAGGTCATATGAGGAGCAGC+TGG | - | chr3.3:9799164-9799183 | MS.gene67622:CDS | 50.0% | |
| AAGTTGAGCCGGTTACAGGT+TGG | - | chr3.3:9794911-9794930 | MS.gene67622:intron | 50.0% | |
| AATTACCGCGGACAGATGGT+TGG | + | chr3.3:9798651-9798670 | None:intergenic | 50.0% | |
| AGAAAGCGGCCACATTGGAT+TGG | - | chr3.3:9797307-9797326 | MS.gene67622:intron | 50.0% | |
| AGACAAGAAAGCGGCCACAT+TGG | - | chr3.3:9797302-9797321 | MS.gene67622:intron | 50.0% | |
| ATAGGCAGGCCAATCCAATG+TGG | + | chr3.3:9797319-9797338 | None:intergenic | 50.0% | |
| CAACTCAACCACGCAAACGA+GGG | - | chr3.3:9794782-9794801 | MS.gene67622:intron | 50.0% | |
| CAAGGCAAGGGAACATTGGA+TGG | - | chr3.3:9794101-9794120 | MS.gene67622:CDS | 50.0% | |
| CACAGCTTCCCAAGAACACT+TGG | + | chr3.3:9797194-9797213 | None:intergenic | 50.0% | |
| CTCGTTTGCGTGGTTGAGTT+GGG | + | chr3.3:9794783-9794802 | None:intergenic | 50.0% | |
| CTTCCCCTCACTCCATGATT+GGG | + | chr3.3:9794491-9794510 | None:intergenic | 50.0% | |
| GAAAATGTGGTCGAAGAGGG+TGG | - | chr3.3:9796788-9796807 | MS.gene67622:intron | 50.0% | |
| GAAGGTCCCATAAGGAGGTA+TGG | + | chr3.3:9796594-9796613 | None:intergenic | 50.0% | |
| GATCTGATTGCTTCAGCAGC+CGG | + | chr3.3:9796992-9797011 | None:intergenic | 50.0% | |
| GCAACAGATGGCAAGTCAAG+CGG | - | chr3.3:9799113-9799132 | MS.gene67622:CDS | 50.0% | |
| GCCCAATATTGAAGGGGATC+TGG | - | chr3.3:9795029-9795048 | MS.gene67622:intron | 50.0% | |
| GCGCGATGCACAATTTGAAG+GGG | - | chr3.3:9794933-9794952 | MS.gene67622:intron | 50.0% | |
| GGAATGCCTCCGAAACCTAA+TGG | - | chr3.3:9796320-9796339 | MS.gene67622:CDS | 50.0% | |
| GGCGCGATGCACAATTTGAA+GGG | - | chr3.3:9794932-9794951 | MS.gene67622:intron | 50.0% | |
| GGTAGATGAGGAGGATGATG+AGG | - | chr3.3:9799266-9799285 | MS.gene67622:CDS | 50.0% | |
| GTAAATGACAGGTCGGAGGA+AGG | + | chr3.3:9796616-9796635 | None:intergenic | 50.0% | |
| TAAAAGCGGCGCACTAGTGT+GGG | + | chr3.3:9799223-9799242 | None:intergenic | 50.0% | |
| TCCTCCTCATCTACCGGATA+AGG | + | chr3.3:9799261-9799280 | None:intergenic | 50.0% | |
| TCTGGTGAGGGAAGGAGTTA+GGG | + | chr3.3:9798301-9798320 | None:intergenic | 50.0% | |
| TCTTCCCCTCACTCCATGAT+TGG | + | chr3.3:9794492-9794511 | None:intergenic | 50.0% | |
| TGAATAAGCTCCCGCATCTC+TGG | + | chr3.3:9799069-9799088 | None:intergenic | 50.0% | |
| TGGCGCGATGCACAATTTGA+AGG | - | chr3.3:9794931-9794950 | MS.gene67622:intron | 50.0% | |
| TTAAAAGCGGCGCACTAGTG+TGG | + | chr3.3:9799224-9799243 | None:intergenic | 50.0% | |
| TTGGCTGCTAACTACCGGAA+GGG | - | chr3.3:9798973-9798992 | MS.gene67622:intron | 50.0% | |
| ! | ACTGGAGGGCACATGTAAGT+GGG | + | chr3.3:9796551-9796570 | None:intergenic | 50.0% |
| ! | CATTTTTGTCCACCTAGGCG+AGG | + | chr3.3:9794653-9794672 | None:intergenic | 50.0% |
| ! | GGAGGTGCAGATGACTTCTA+TGG | - | chr3.3:9794553-9794572 | MS.gene67622:intron | 50.0% |
| ! | GTTGTTGTTGGGGAACAGGT+GGG | + | chr3.3:9796745-9796764 | None:intergenic | 50.0% |
| ! | TACTGGAGGGCACATGTAAG+TGG | + | chr3.3:9796552-9796571 | None:intergenic | 50.0% |
| ! | TCGTTTGCGTGGTTGAGTTG+GGG | + | chr3.3:9794782-9794801 | None:intergenic | 50.0% |
| ! | TGAGCCTTATCCGGTAGATG+AGG | - | chr3.3:9799254-9799273 | MS.gene67622:CDS | 50.0% |
| ! | TGTGGTGGGACTGAATATGG+TGG | + | chr3.3:9796638-9796657 | None:intergenic | 50.0% |
| ! | TGTTGTTGTTGGGGAACAGG+TGG | + | chr3.3:9796746-9796765 | None:intergenic | 50.0% |
| !! | AAAGGTGGGTTTTGTGGTGG+AGG | + | chr3.3:9796692-9796711 | None:intergenic | 50.0% |
| !! | AAGGTGGGTTTTGTGGTGGA+GGG | + | chr3.3:9796691-9796710 | None:intergenic | 50.0% |
| !! | GAAGGGGAAGGTTTTGTGGT+GGG | + | chr3.3:9796652-9796671 | None:intergenic | 50.0% |
| !! | GCGTTGGTTTAGGCTCTTTC+AGG | - | chr3.3:9797078-9797097 | MS.gene67622:intron | 50.0% |
| !! | GGTTAAGTATTGGGCGTCTG+AGG | - | chr3.3:9797351-9797370 | MS.gene67622:intron | 50.0% |
| !! | TTCGGTGCTTCTTCTCTGTG+AGG | - | chr3.3:9795872-9795891 | MS.gene67622:CDS | 50.0% |
| !!! | ACAGGTGGGTTTTGTTGTGG+AGG | + | chr3.3:9796731-9796750 | None:intergenic | 50.0% |
| !!! | CAGGTGGGTTTTGTTGTGGA+GGG | + | chr3.3:9796730-9796749 | None:intergenic | 50.0% |
| !!! | GGAACAGGTGGGTTTTGTTG+TGG | + | chr3.3:9796734-9796753 | None:intergenic | 50.0% |
| AAATAGCCTCGGCAAGCTGC+CGG | + | chr3.3:9798858-9798877 | None:intergenic | 55.0% | |
| AATACTGCGACGAGCGTGCT+AGG | - | chr3.3:9797642-9797661 | MS.gene67622:intron | 55.0% | |
| AATCTACCTGGTCGCCACTC+TGG | - | chr3.3:9794078-9794097 | MS.gene67622:CDS | 55.0% | |
| AATGTGGTCGAAGAGGGTGG+TGG | - | chr3.3:9796791-9796810 | MS.gene67622:intron | 55.0% | |
| AGCAAAGAAGAACCGGGCGT+CGG | - | chr3.3:9797396-9797415 | MS.gene67622:intron | 55.0% | |
| ATGACAGGTCGGAGGAAGGA+AGG | + | chr3.3:9796612-9796631 | None:intergenic | 55.0% | |
| ATGTGCCCTCCAGTACATCC+TGG | - | chr3.3:9796557-9796576 | MS.gene67622:CDS | 55.0% | |
| CCAACTCAACCACGCAAACG+AGG | - | chr3.3:9794781-9794800 | MS.gene67622:intron | 55.0% | |
| CCTCGTTTGCGTGGTTGAGT+TGG | + | chr3.3:9794784-9794803 | None:intergenic | 55.0% | |
| CTCTGGTGAGGGAAGGAGTT+AGG | + | chr3.3:9798302-9798321 | None:intergenic | 55.0% | |
| CTGGCAAGGCAAGGGAACAT+TGG | - | chr3.3:9794097-9794116 | MS.gene67622:CDS | 55.0% | |
| CTTCTAGCCAGGGATCACCT+GGG | - | chr3.3:9796477-9796496 | MS.gene67622:CDS | 55.0% | |
| CTTGGCTGCTAACTACCGGA+AGG | - | chr3.3:9798972-9798991 | MS.gene67622:intron | 55.0% | |
| GAAAGAGCAAGGGCAACAGC+AGG | - | chr3.3:9796342-9796361 | MS.gene67622:CDS | 55.0% | |
| GATTGCTTCAGCAGCCGGTT+TGG | + | chr3.3:9796987-9797006 | None:intergenic | 55.0% | |
| GCCTTATCCGGTAGATGAGG+AGG | - | chr3.3:9799257-9799276 | MS.gene67622:CDS | 55.0% | |
| GGAAGGAAGGTCCCATAAGG+AGG | + | chr3.3:9796599-9796618 | None:intergenic | 55.0% | |
| GGAGGAAGGAAGGTCCCATA+AGG | + | chr3.3:9796602-9796621 | None:intergenic | 55.0% | |
| GGAGGATGCATTCACACTGG+TGG | - | chr3.3:9797424-9797443 | MS.gene67622:intron | 55.0% | |
| GGGCACATGTAAGTGGGATG+AGG | + | chr3.3:9796545-9796564 | None:intergenic | 55.0% | |
| GGTGGTAAATGACAGGTCGG+AGG | + | chr3.3:9796620-9796639 | None:intergenic | 55.0% | |
| GTTGGGGCCAGACCACAATT+CGG | + | chr3.3:9797783-9797802 | None:intergenic | 55.0% | |
| TAGCACGCTCGTCGCAGTAT+TGG | + | chr3.3:9797643-9797662 | None:intergenic | 55.0% | |
| TAGTGTAGCTGCTCCTGCGA+CGG | - | chr3.3:9796511-9796530 | MS.gene67622:CDS | 55.0% | |
| TCTTCTAGCCAGGGATCACC+TGG | - | chr3.3:9796476-9796495 | MS.gene67622:CDS | 55.0% | |
| TGCATCCAACCATCTGTCCG+CGG | - | chr3.3:9798643-9798662 | MS.gene67622:intron | 55.0% | |
| TTTAGGCAAGCCCAGGCTCA+AGG | - | chr3.3:9799192-9799211 | MS.gene67622:CDS | 55.0% | |
| ! | AGGAGCAGCTACACTAGCCT+GGG | + | chr3.3:9796507-9796526 | None:intergenic | 55.0% |
| ! | AGGAGCAGCTGGCTCAGTTT+AGG | - | chr3.3:9799175-9799194 | MS.gene67622:CDS | 55.0% |
| ! | CAGAGCCGCTGCACGTTTTT+CGG | - | chr3.3:9797246-9797265 | MS.gene67622:intron | 55.0% |
| ! | GAGGACAGATCATGGTTCGG+TGG | - | chr3.3:9795891-9795910 | MS.gene67622:CDS | 55.0% |
| ! | GTTGTTGTTGGGGAAGGGGA+AGG | + | chr3.3:9796664-9796683 | None:intergenic | 55.0% |
| ! | TGGGGAAGGGGAAGGTTTTG+TGG | + | chr3.3:9796656-9796675 | None:intergenic | 55.0% |
| !! | AAGAACCGGGCGTCGGAAAA+GGG | - | chr3.3:9797403-9797422 | MS.gene67622:intron | 55.0% |
| !! | ACTGGTTTGATCCCTCGCCT+AGG | - | chr3.3:9794638-9794657 | MS.gene67622:intron | 55.0% |
| !! | CGTGGTTGAGTTGGGGGATA+AGG | + | chr3.3:9794775-9794794 | None:intergenic | 55.0% |
| !! | CGTTTGCGTGGTTGAGTTGG+GGG | + | chr3.3:9794781-9794800 | None:intergenic | 55.0% |
| !! | GGAAGGGGAAGGTTTTGTGG+TGG | + | chr3.3:9796653-9796672 | None:intergenic | 55.0% |
| ACTGACCACCCTCGTTTGCG+TGG | + | chr3.3:9794793-9794812 | None:intergenic | 60.0% | |
| CAGGAGCAGCTACACTAGCC+TGG | + | chr3.3:9796508-9796527 | None:intergenic | 60.0% | |
| CTCAACCACGCAAACGAGGG+TGG | - | chr3.3:9794785-9794804 | MS.gene67622:intron | 60.0% | |
| CTCAGCTGACGCCAGAGATG+CGG | - | chr3.3:9799055-9799074 | MS.gene67622:CDS | 60.0% | |
| GCAAGGGCAACAGCAGGAAG+CGG | - | chr3.3:9796348-9796367 | MS.gene67622:CDS | 60.0% | |
| GCATCGCGCCAACCTGTAAC+CGG | + | chr3.3:9794922-9794941 | None:intergenic | 60.0% | |
| GGCTCAGTTTAGGCAAGCCC+AGG | - | chr3.3:9799185-9799204 | MS.gene67622:CDS | 60.0% | |
| GGTTTGATCCCTCGCCTAGG+TGG | - | chr3.3:9794641-9794660 | MS.gene67622:intron | 60.0% | |
| GTTCCCTTGCCTTGCCAGAG+TGG | + | chr3.3:9794095-9794114 | None:intergenic | 60.0% | |
| TCAGCTGACGCCAGAGATGC+GGG | - | chr3.3:9799056-9799075 | MS.gene67622:CDS | 60.0% | |
| TCAGTCTCGATGCGACCCCT+TGG | + | chr3.3:9794832-9794851 | None:intergenic | 60.0% | |
| TCGCCACTCTGGCAAGGCAA+GGG | - | chr3.3:9794089-9794108 | MS.gene67622:CDS | 60.0% | |
| ! | AGCAGCTACACTAGCCTGGG+AGG | + | chr3.3:9796504-9796523 | None:intergenic | 60.0% |
| ! | ATCCTCCCTTTTCCGACGCC+CGG | + | chr3.3:9797411-9797430 | None:intergenic | 60.0% |
| ! | CTTAGTGGACGCAGCGACAG+AGG | - | chr3.3:9796382-9796401 | MS.gene67622:CDS | 60.0% |
| ! | TTGGGCGTCTGAGGCGTTCA+AGG | - | chr3.3:9797360-9797379 | MS.gene67622:intron | 60.0% |
| !! | GAAGAACCGGGCGTCGGAAA+AGG | - | chr3.3:9797402-9797421 | MS.gene67622:intron | 60.0% |
| !! | GCTTCAGCAGCCGGTTTGGA+AGG | + | chr3.3:9796983-9797002 | None:intergenic | 60.0% |
| AAGCGGCGCACTAGTGTGGG+AGG | + | chr3.3:9799220-9799239 | None:intergenic | 65.0% | |
| ACCTGGTCGCCACTCTGGCA+AGG | - | chr3.3:9794083-9794102 | MS.gene67622:CDS | 65.0% | |
| AGCGGCGCACTAGTGTGGGA+GGG | + | chr3.3:9799219-9799238 | None:intergenic | 65.0% | |
| CGCATCTCTGGCGTCAGCTG+AGG | + | chr3.3:9799057-9799076 | None:intergenic | 65.0% | |
| GTATGACCGGCAGCTTGCCG+AGG | - | chr3.3:9798849-9798868 | MS.gene67622:CDS | 65.0% | |
| GTCGCCACTCTGGCAAGGCA+AGG | - | chr3.3:9794088-9794107 | MS.gene67622:CDS | 65.0% | |
| GTGGGAGGGACCTTGAGCCT+GGG | + | chr3.3:9799205-9799224 | None:intergenic | 65.0% | |
| TGAGGAGCAGAAGCCGTCGC+AGG | + | chr3.3:9796527-9796546 | None:intergenic | 65.0% | |
| TGGCGTCAGCTGAGGCTGCT+GGG | + | chr3.3:9799049-9799068 | None:intergenic | 65.0% | |
| TGTGGGAGGGACCTTGAGCC+TGG | + | chr3.3:9799206-9799225 | None:intergenic | 65.0% | |
| ! | ACACTAGCCTGGGAGGACCC+AGG | + | chr3.3:9796497-9796516 | None:intergenic | 65.0% |
| ! | CGGAGAGCACGCTGAGCGTA+TGG | - | chr3.3:9797459-9797478 | MS.gene67622:intron | 65.0% |
| !! | AACCGGGCGTCGGAAAAGGG+AGG | - | chr3.3:9797406-9797425 | MS.gene67622:intron | 65.0% |
| !! | CGAAGAGGGTGGTGGAGAGC+TGG | - | chr3.3:9796799-9796818 | MS.gene67622:intron | 65.0% |
| CGAGCGTGCTAGGCGTGTGC+AGG | - | chr3.3:9797652-9797671 | MS.gene67622:intron | 70.0% | |
| CGTCAGCTGAGGCTGCTGGG+AGG | + | chr3.3:9799046-9799065 | None:intergenic | 70.0% | |
| CTGGCGTCAGCTGAGGCTGC+TGG | + | chr3.3:9799050-9799069 | None:intergenic | 70.0% | |
| GCCTTGCCAGAGTGGCGACC+AGG | + | chr3.3:9794087-9794106 | None:intergenic | 70.0% | |
| GGGAGGACCCAGGTGATCCC+TGG | + | chr3.3:9796487-9796506 | None:intergenic | 70.0% | |
| GGGATCACCTGGGTCCTCCC+AGG | - | chr3.3:9796487-9796506 | MS.gene67622:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 9793889 | 9799305 | 9793889 | ID=MS.gene67622 |
| chr3.3 | mRNA | 9793889 | 9799305 | 9793889 | ID=MS.gene67622.t1;Parent=MS.gene67622 |
| chr3.3 | exon | 9798998 | 9799305 | 9798998 | ID=MS.gene67622.t1.exon1;Parent=MS.gene67622.t1 |
| chr3.3 | CDS | 9798998 | 9799305 | 9798998 | ID=cds.MS.gene67622.t1;Parent=MS.gene67622.t1 |
| chr3.3 | exon | 9798839 | 9798906 | 9798839 | ID=MS.gene67622.t1.exon2;Parent=MS.gene67622.t1 |
| chr3.3 | CDS | 9798839 | 9798906 | 9798839 | ID=cds.MS.gene67622.t1;Parent=MS.gene67622.t1 |
| chr3.3 | exon | 9798119 | 9798265 | 9798119 | ID=MS.gene67622.t1.exon3;Parent=MS.gene67622.t1 |
| chr3.3 | CDS | 9798119 | 9798265 | 9798119 | ID=cds.MS.gene67622.t1;Parent=MS.gene67622.t1 |
| chr3.3 | exon | 9796825 | 9796873 | 9796825 | ID=MS.gene67622.t1.exon4;Parent=MS.gene67622.t1 |
| chr3.3 | CDS | 9796825 | 9796873 | 9796825 | ID=cds.MS.gene67622.t1;Parent=MS.gene67622.t1 |
| chr3.3 | exon | 9796297 | 9796710 | 9796297 | ID=MS.gene67622.t1.exon5;Parent=MS.gene67622.t1 |
| chr3.3 | CDS | 9796297 | 9796710 | 9796297 | ID=cds.MS.gene67622.t1;Parent=MS.gene67622.t1 |
| chr3.3 | exon | 9796095 | 9796221 | 9796095 | ID=MS.gene67622.t1.exon6;Parent=MS.gene67622.t1 |
| chr3.3 | CDS | 9796095 | 9796221 | 9796095 | ID=cds.MS.gene67622.t1;Parent=MS.gene67622.t1 |
| chr3.3 | exon | 9795714 | 9796004 | 9795714 | ID=MS.gene67622.t1.exon7;Parent=MS.gene67622.t1 |
| chr3.3 | CDS | 9795714 | 9796004 | 9795714 | ID=cds.MS.gene67622.t1;Parent=MS.gene67622.t1 |
| chr3.3 | exon | 9795521 | 9795622 | 9795521 | ID=MS.gene67622.t1.exon8;Parent=MS.gene67622.t1 |
| chr3.3 | CDS | 9795521 | 9795622 | 9795521 | ID=cds.MS.gene67622.t1;Parent=MS.gene67622.t1 |
| chr3.3 | exon | 9793889 | 9794350 | 9793889 | ID=MS.gene67622.t1.exon9;Parent=MS.gene67622.t1 |
| chr3.3 | CDS | 9793889 | 9794350 | 9793889 | ID=cds.MS.gene67622.t1;Parent=MS.gene67622.t1 |
| Gene Sequence |
| Protein sequence |
