Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67911.t1 | XP_013442714.1 | 94.7 | 398 | 21 | 0 | 1 | 398 | 1 | 398 | 1.40E-214 | 755.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67911.t1 | Q6GMB0 | 31.6 | 370 | 223 | 9 | 37 | 398 | 39 | 386 | 2.5e-39 | 164.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67911.t1 | A0A072TGP8 | 94.7 | 398 | 21 | 0 | 1 | 398 | 1 | 398 | 9.9e-215 | 755.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene26246 | MS.gene67911 | PPI |
| MS.gene67911 | MS.gene009653 | PPI |
| MS.gene017247 | MS.gene67911 | PPI |
| MS.gene67911 | MS.gene049594 | PPI |
| MS.gene98045 | MS.gene67911 | PPI |
| MS.gene53889 | MS.gene67911 | PPI |
| MS.gene67911 | MS.gene05127 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67911.t1 | MTR_0103s0100 | 96.985 | 398 | 12 | 0 | 1 | 398 | 1 | 398 | 0.0 | 796 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene67911.t1 | AT2G44580 | 55.949 | 395 | 155 | 4 | 10 | 398 | 5 | 386 | 6.46e-158 | 450 |
| MS.gene67911.t1 | AT2G44580 | 55.949 | 395 | 155 | 4 | 10 | 398 | 5 | 386 | 6.46e-158 | 450 |
Find 80 sgRNAs with CRISPR-Local
Find 206 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ACTTTCTCTTACCTCCTTTC+AGG | 0.140263 | 7.2:+63213781 | None:intergenic |
| GTTGCATATCACCCTGATTT+TGG | 0.178187 | 7.2:-63216534 | MS.gene67911:CDS |
| TACTATCTTGCACTGAAAAT+TGG | 0.229137 | 7.2:+63213366 | None:intergenic |
| CCTGAAGTCTGCTGTGGTTC+TGG | 0.271122 | 7.2:+63216603 | None:intergenic |
| CAATTTAAGTTTATCAAGTC+TGG | 0.284052 | 7.2:+63214238 | None:intergenic |
| TACGATTCTGATTGATTTGC+TGG | 0.300346 | 7.2:+63214362 | None:intergenic |
| TACCTTTCATTCAAAACATC+TGG | 0.312568 | 7.2:+63216465 | None:intergenic |
| GGAGTTAAGGGTTGGATTGC+AGG | 0.317393 | 7.2:-63214090 | MS.gene67911:CDS |
| CTAGATCAGGATTATATAAC+TGG | 0.322642 | 7.2:-63214148 | MS.gene67911:CDS |
| ATAATATCTGAACCTGATAT+AGG | 0.331471 | 7.2:+63213548 | None:intergenic |
| GAGTTACATGGACATGATTC+TGG | 0.333299 | 7.2:-63214021 | MS.gene67911:CDS |
| TCATCATGAGGTCCAAAATC+AGG | 0.344472 | 7.2:+63216522 | None:intergenic |
| TCTAGAGCTGGATGAGAAAT+TGG | 0.347964 | 7.2:-63216490 | MS.gene67911:CDS |
| AAAAGTTGTACCTGGTAGTA+TGG | 0.354433 | 7.2:-63214279 | MS.gene67911:CDS |
| CAATGCCTTGCAAGTACCTT+TGG | 0.365770 | 7.2:+63213906 | None:intergenic |
| ACATATGCTATGAAGTTTGT+TGG | 0.371449 | 7.2:-63214413 | MS.gene67911:CDS |
| AGCTAGTGACGAGGAGTTAA+GGG | 0.384193 | 7.2:-63214102 | MS.gene67911:CDS |
| GAGGTATTGACAGAGAAAAT+TGG | 0.391418 | 7.2:-63213684 | MS.gene67911:CDS |
| CCAGAACCACAGCAGACTTC+AGG | 0.399798 | 7.2:-63216603 | MS.gene67911:CDS |
| AAGATCTACAGCCCTATATC+AGG | 0.405081 | 7.2:-63213560 | MS.gene67911:intron |
| AAGCTAGTGACGAGGAGTTA+AGG | 0.405465 | 7.2:-63214103 | MS.gene67911:CDS |
| TATTTCAGGATGGTCTTAAG+AGG | 0.410120 | 7.2:-63214476 | MS.gene67911:intron |
| TTTCAGAGAGCGTGCAAAAT+GGG | 0.425167 | 7.2:-63213589 | MS.gene67911:CDS |
| CTGTGGAGATCAATGGATAT+TGG | 0.428629 | 7.2:-63214058 | MS.gene67911:CDS |
| TGCACGCTCTCTGAAAAGAA+TGG | 0.432893 | 7.2:+63213596 | None:intergenic |
| TAATATCTGAACCTGATATA+GGG | 0.441929 | 7.2:+63213549 | None:intergenic |
| TGGTACAAGCAAAACAGAAT+TGG | 0.457146 | 7.2:+63214385 | None:intergenic |
| AAAGTGGGATGCATTTCATC+TGG | 0.459477 | 7.2:+63213723 | None:intergenic |
| CAAAGAACTGCATCTTCGTC+AGG | 0.467011 | 7.2:+63214449 | None:intergenic |
| CTTTCAGCTGTGGAGATCAA+TGG | 0.471420 | 7.2:-63214065 | MS.gene67911:CDS |
| TGGTAGTATGGAGCTTATTG+AGG | 0.485548 | 7.2:-63214267 | MS.gene67911:CDS |
| AGAATGGAGAAGCGTTCAGC+TGG | 0.490161 | 7.2:+63213612 | None:intergenic |
| AATTTAAGTTTATCAAGTCT+GGG | 0.490225 | 7.2:+63214239 | None:intergenic |
| AAAATTCAGTGTTGAATGAC+TGG | 0.512521 | 7.2:-63213986 | MS.gene67911:CDS |
| AGAAAATTGGAGTTGAGACA+TGG | 0.514429 | 7.2:-63213671 | MS.gene67911:CDS |
| GAGAATCACGAATCTAGATC+AGG | 0.514548 | 7.2:-63214161 | MS.gene67911:CDS |
| ACCTTCCATAAGATCAAAAG+TGG | 0.518379 | 7.2:+63213707 | None:intergenic |
| ATTGCAGGCTCTTTCAGCTG+TGG | 0.518858 | 7.2:-63214075 | MS.gene67911:CDS |
| GCAAAGTGGTGTGTGGAAGT+TGG | 0.529433 | 7.2:-63213841 | MS.gene67911:CDS |
| GTACCAGGTCTTTCTGCAGA+AGG | 0.532732 | 7.2:-63213438 | MS.gene67911:CDS |
| GTGGAAGTTGGATGAGAAGC+GGG | 0.536854 | 7.2:-63213829 | MS.gene67911:CDS |
| AAGCGTTCAGCTGGAGTGGA+AGG | 0.542810 | 7.2:+63213621 | None:intergenic |
| AGATGAAGTTGTGAATATGC+TGG | 0.542969 | 7.2:-63213943 | MS.gene67911:CDS |
| GGAGAAGCGTTCAGCTGGAG+TGG | 0.543503 | 7.2:+63213617 | None:intergenic |
| TGATCTCATAATTCTAGAGC+TGG | 0.546425 | 7.2:-63216502 | MS.gene67911:CDS |
| GCAACAGAAATCGATGATCC+TGG | 0.555146 | 7.2:+63216552 | None:intergenic |
| AGTGACGAGGAGTTAAGGGT+TGG | 0.559394 | 7.2:-63214098 | MS.gene67911:CDS |
| CAGATTTGATGAGAATGACA+TGG | 0.560594 | 7.2:-63214195 | MS.gene67911:CDS |
| ACCTTTCATTCAAAACATCT+GGG | 0.562619 | 7.2:+63216466 | None:intergenic |
| CATCATGAGGTCCAAAATCA+GGG | 0.563023 | 7.2:+63216523 | None:intergenic |
| GAGAGCGTGCAAAATGGGAA+TGG | 0.564104 | 7.2:-63213584 | MS.gene67911:CDS |
| ATTAGTTGATGAGAGTTACA+TGG | 0.564361 | 7.2:-63214033 | MS.gene67911:CDS |
| TTCAGGGATCTGGATGTACC+AGG | 0.570204 | 7.2:-63213453 | MS.gene67911:intron |
| ATTTAAGTTTATCAAGTCTG+GGG | 0.591494 | 7.2:+63214240 | None:intergenic |
| GATTTCCAAAGGTACTTGCA+AGG | 0.595602 | 7.2:-63213911 | MS.gene67911:CDS |
| TTTAAGTTTATCAAGTCTGG+GGG | 0.597237 | 7.2:+63214241 | None:intergenic |
| GTGAATATGCTGGAATCAGA+TGG | 0.612073 | 7.2:-63213933 | MS.gene67911:CDS |
| ATTGGATCATCATTAGCCGA+TGG | 0.613418 | 7.2:+63213384 | None:intergenic |
| AAACCTTCTGCAGAAAGACC+TGG | 0.615596 | 7.2:+63213435 | None:intergenic |
| TGGAAGGCAATGACGAGACA+CGG | 0.621677 | 7.2:+63213637 | None:intergenic |
| GCTCCTCCTGAAGTCTGCTG+TGG | 0.628242 | 7.2:+63216597 | None:intergenic |
| GAAAATTGGAGTTGAGACAT+GGG | 0.629514 | 7.2:-63213670 | MS.gene67911:CDS |
| CACTCGAAAGACACAACCAT+CGG | 0.633978 | 7.2:-63213400 | MS.gene67911:CDS |
| TCAATAAGCTCCATACTACC+AGG | 0.636229 | 7.2:+63214269 | None:intergenic |
| TATGCTAGAGAAATCCTGAA+AGG | 0.639851 | 7.2:-63213795 | MS.gene67911:CDS |
| AGTGTACTAAAAGTTGTACC+TGG | 0.641842 | 7.2:-63214287 | MS.gene67911:CDS |
| GCTAGAGAAATCCTGAAAGG+AGG | 0.643390 | 7.2:-63213792 | MS.gene67911:CDS |
| TGTGGAAGTTGGATGAGAAG+CGG | 0.646023 | 7.2:-63213830 | MS.gene67911:CDS |
| GAACCACAGCAGACTTCAGG+AGG | 0.646781 | 7.2:-63216600 | MS.gene67911:CDS |
| GGAATCAGATGGATTTCCAA+AGG | 0.647832 | 7.2:-63213922 | MS.gene67911:CDS |
| ACACTTAGACATATGTCACC+AGG | 0.648575 | 7.2:-63216570 | MS.gene67911:CDS |
| GATTCTGATTGATTTGCTGG+TGG | 0.656551 | 7.2:+63214365 | None:intergenic |
| ACAGCAGACTTCAGGAGGAG+CGG | 0.657032 | 7.2:-63216595 | MS.gene67911:CDS |
| AGGCAATGACGAGACACGGA+AGG | 0.658195 | 7.2:+63213641 | None:intergenic |
| ATTGCATGCAAAGTGGTGTG+TGG | 0.666073 | 7.2:-63213848 | MS.gene67911:CDS |
| CCTTCCATAAGATCAAAAGT+GGG | 0.666519 | 7.2:+63213708 | None:intergenic |
| GAAAATGATTGCATGCAAAG+TGG | 0.671448 | 7.2:-63213855 | MS.gene67911:CDS |
| TTGCTTGCATGTGTATGCCA+AGG | 0.692578 | 7.2:-63213886 | MS.gene67911:CDS |
| AGAATTATGAGATCATCATG+AGG | 0.708784 | 7.2:+63216510 | None:intergenic |
| AAATATTCAAGCTAGTGACG+AGG | 0.720450 | 7.2:-63214111 | MS.gene67911:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAATATGACCATAATATT+AGG | - | chr7.2:63215354-63215373 | MS.gene67911:intron | 15.0% |
| !! | AAAATCCATCTCAATTTATT+TGG | - | chr7.2:63213877-63213896 | MS.gene67911:CDS | 20.0% |
| !! | AAAATTATAGTACCCAAAAA+TGG | - | chr7.2:63214045-63214064 | MS.gene67911:CDS | 20.0% |
| !! | AATAGCATTATGATTTCTTA+TGG | + | chr7.2:63214430-63214449 | None:intergenic | 20.0% |
| !! | ATTAGACATATCAAAAGAAA+CGG | + | chr7.2:63214398-63214417 | None:intergenic | 20.0% |
| !! | TAACTGAAATCCTAATATTA+TGG | + | chr7.2:63215367-63215386 | None:intergenic | 20.0% |
| !! | TCGAAAAAACAATATAAAGA+TGG | + | chr7.2:63213700-63213719 | None:intergenic | 20.0% |
| !! | TCTAAGTAACTATTGTAATT+AGG | + | chr7.2:63215391-63215410 | None:intergenic | 20.0% |
| !!! | AATTTAAGTTTATCAAGTCT+GGG | + | chr7.2:63215741-63215760 | None:intergenic | 20.0% |
| !!! | ATGAGTTTTTGACTTATTTA+AGG | - | chr7.2:63213743-63213762 | MS.gene67911:CDS | 20.0% |
| !!! | TTCTAATTTTGAATGTTTCA+GGG | - | chr7.2:63216508-63216527 | MS.gene67911:CDS | 20.0% |
| !!! | TTTCTAATTTTGAATGTTTC+AGG | - | chr7.2:63216507-63216526 | MS.gene67911:CDS | 20.0% |
| !!! | TTTGGGTACTATAATTTTAT+TGG | + | chr7.2:63214043-63214062 | None:intergenic | 20.0% |
| ! | AACAACCAAATAAATTGAGA+TGG | + | chr7.2:63213885-63213904 | None:intergenic | 25.0% |
| ! | ACATGAAAATGTGTAGAAAA+GGG | + | chr7.2:63214793-63214812 | None:intergenic | 25.0% |
| ! | AGAAATCATAATGCTATTCT+TGG | - | chr7.2:63214432-63214451 | MS.gene67911:CDS | 25.0% |
| ! | ATAATATCTGAACCTGATAT+AGG | + | chr7.2:63216432-63216451 | None:intergenic | 25.0% |
| ! | CTTTAATTACTGTAATTACG+TGG | - | chr7.2:63213658-63213677 | MS.gene67911:CDS | 25.0% |
| ! | GAACACATAAATAGTAAGAA+AGG | + | chr7.2:63215251-63215270 | None:intergenic | 25.0% |
| ! | TAATATCTGAACCTGATATA+GGG | + | chr7.2:63216431-63216450 | None:intergenic | 25.0% |
| !! | AACTTTTCAATATAACCTAG+GGG | + | chr7.2:63214757-63214776 | None:intergenic | 25.0% |
| !! | AGTATTGTGATTCAGTATTT+TGG | + | chr7.2:63214655-63214674 | None:intergenic | 25.0% |
| !! | ATCATTTTCTTTTACTTCCT+TGG | + | chr7.2:63216111-63216130 | None:intergenic | 25.0% |
| !! | ATTTAAGTTTATCAAGTCTG+GGG | + | chr7.2:63215740-63215759 | None:intergenic | 25.0% |
| !! | CAACTTTTCAATATAACCTA+GGG | + | chr7.2:63214758-63214777 | None:intergenic | 25.0% |
| !! | CAATTTAAGTTTATCAAGTC+TGG | + | chr7.2:63215742-63215761 | None:intergenic | 25.0% |
| !! | GAGAAAGTTAGAGAATTTTA+TGG | - | chr7.2:63216211-63216230 | MS.gene67911:intron | 25.0% |
| !! | GAGACATTTTTATATCGAAA+AGG | + | chr7.2:63214307-63214326 | None:intergenic | 25.0% |
| !! | TAGAGAATTTTATGGAAGAA+TGG | - | chr7.2:63216219-63216238 | MS.gene67911:intron | 25.0% |
| !!! | ATTTGATTTTATGAAGCTAG+TGG | - | chr7.2:63213808-63213827 | MS.gene67911:CDS | 25.0% |
| !!! | CATATTTTAACAGAAGATCT+TGG | + | chr7.2:63214495-63214514 | None:intergenic | 25.0% |
| !!! | CGTAATTTTAATTTGACTCT+TGG | - | chr7.2:63214982-63215001 | MS.gene67911:intron | 25.0% |
| !!! | GCTTTTTGGATATTTTAAAG+TGG | + | chr7.2:63214101-63214120 | None:intergenic | 25.0% |
| !!! | TCATTTCCTTCATTTTTTCA+AGG | + | chr7.2:63213569-63213588 | None:intergenic | 25.0% |
| ACATATGCTATGAAGTTTGT+TGG | - | chr7.2:63215564-63215583 | MS.gene67911:intron | 30.0% | |
| ACATGGTTTCTTTCTATTTC+AGG | - | chr7.2:63215487-63215506 | MS.gene67911:intron | 30.0% | |
| ACCTTTCATTCAAAACATCT+GGG | + | chr7.2:63213514-63213533 | None:intergenic | 30.0% | |
| AGAAATGTAGAACACAGAAA+TGG | + | chr7.2:63215211-63215230 | None:intergenic | 30.0% | |
| AGAATTATGAGATCATCATG+AGG | + | chr7.2:63213470-63213489 | None:intergenic | 30.0% | |
| ATAAGTAAGGAAAGAGAGAA+AGG | + | chr7.2:63215464-63215483 | None:intergenic | 30.0% | |
| ATTAAGGGATACCTATGAAA+AGG | + | chr7.2:63214155-63214174 | None:intergenic | 30.0% | |
| ATTCTTCACTTAGCTTATCA+TGG | - | chr7.2:63215095-63215114 | MS.gene67911:intron | 30.0% | |
| ATTGCTGAATTAAACCATTG+AGG | + | chr7.2:63213925-63213944 | None:intergenic | 30.0% | |
| CCTAGGTTATATTGAAAAGT+TGG | - | chr7.2:63214756-63214775 | MS.gene67911:intron | 30.0% | |
| CTAGATCAGGATTATATAAC+TGG | - | chr7.2:63215829-63215848 | MS.gene67911:intron | 30.0% | |
| CTCAAGGATAGTTATGAAAT+TGG | - | chr7.2:63214213-63214232 | MS.gene67911:CDS | 30.0% | |
| CTTATTTAAGGAGCTTTCAA+TGG | - | chr7.2:63213755-63213774 | MS.gene67911:CDS | 30.0% | |
| CTTTCCTTACTTATGTTACA+TGG | - | chr7.2:63215470-63215489 | MS.gene67911:intron | 30.0% | |
| GAAACCATGTAACATAAGTA+AGG | + | chr7.2:63215477-63215496 | None:intergenic | 30.0% | |
| GACATGAAAATGTGTAGAAA+AGG | + | chr7.2:63214794-63214813 | None:intergenic | 30.0% | |
| GGATTTCAAACATTGAAAAG+AGG | + | chr7.2:63215143-63215162 | None:intergenic | 30.0% | |
| GTAACTCCTTGAAAAAATGA+AGG | - | chr7.2:63213560-63213579 | MS.gene67911:intron | 30.0% | |
| TACCTTTCATTCAAAACATC+TGG | + | chr7.2:63213515-63213534 | None:intergenic | 30.0% | |
| TGAATTAAACCATTGAGGTT+TGG | + | chr7.2:63213920-63213939 | None:intergenic | 30.0% | |
| TTGTCAAGATTCAATTAGTG+TGG | + | chr7.2:63214243-63214262 | None:intergenic | 30.0% | |
| ! | AAAATTCAGTGTTGAATGAC+TGG | - | chr7.2:63215991-63216010 | MS.gene67911:intron | 30.0% |
| ! | AATAGTCATACACAGCTTTT+TGG | + | chr7.2:63214115-63214134 | None:intergenic | 30.0% |
| ! | AGAATTTTATGGAAGAATGG+AGG | - | chr7.2:63216222-63216241 | MS.gene67911:intron | 30.0% |
| ! | ATACACCAAAACCTTTTCAT+AGG | - | chr7.2:63214141-63214160 | MS.gene67911:CDS | 30.0% |
| ! | ATGGATTTTCATTTCATCAG+AGG | + | chr7.2:63213866-63213885 | None:intergenic | 30.0% |
| ! | CACATTTTCATGTCTTTTCT+TGG | - | chr7.2:63214800-63214819 | MS.gene67911:intron | 30.0% |
| ! | CCAACTTTTCAATATAACCT+AGG | + | chr7.2:63214759-63214778 | None:intergenic | 30.0% |
| ! | GTTGTTACTTAGGATAAAAG+TGG | + | chr7.2:63214464-63214483 | None:intergenic | 30.0% |
| ! | TGATACTTTGTTTGAGAGAT+TGG | - | chr7.2:63214525-63214544 | MS.gene67911:intron | 30.0% |
| ! | TTTAAGTTTATCAAGTCTGG+GGG | + | chr7.2:63215739-63215758 | None:intergenic | 30.0% |
| !! | AGTTTTTCAACAAGTCTTCT+AGG | - | chr7.2:63214281-63214300 | MS.gene67911:CDS | 30.0% |
| !! | ATTAGTTGATGAGAGTTACA+TGG | - | chr7.2:63215944-63215963 | MS.gene67911:intron | 30.0% |
| !! | GGTAGAATTTGTTGTTACTT+AGG | + | chr7.2:63214474-63214493 | None:intergenic | 30.0% |
| AAAAGTTGTACCTGGTAGTA+TGG | - | chr7.2:63215698-63215717 | MS.gene67911:intron | 35.0% | |
| AAACATTGAAAAGAGGAGAG+TGG | + | chr7.2:63215136-63215155 | None:intergenic | 35.0% | |
| AAATATTCAAGCTAGTGACG+AGG | - | chr7.2:63215866-63215885 | MS.gene67911:intron | 35.0% | |
| AAATGTGTAGAAAAGGGACT+TGG | + | chr7.2:63214787-63214806 | None:intergenic | 35.0% | |
| AATGGCTTAGTGAAGACATT+TGG | - | chr7.2:63213773-63213792 | MS.gene67911:CDS | 35.0% | |
| ACCTTCCATAAGATCAAAAG+TGG | + | chr7.2:63216273-63216292 | None:intergenic | 35.0% | |
| AGAAAATTGGAGTTGAGACA+TGG | - | chr7.2:63216306-63216325 | MS.gene67911:intron | 35.0% | |
| AGATGAAGTTGTGAATATGC+TGG | - | chr7.2:63216034-63216053 | MS.gene67911:intron | 35.0% | |
| AGTCAAAAACTCATATGCTC+TGG | + | chr7.2:63213737-63213756 | None:intergenic | 35.0% | |
| AGTGTACTAAAAGTTGTACC+TGG | - | chr7.2:63215690-63215709 | MS.gene67911:intron | 35.0% | |
| CAGATTTGATGAGAATGACA+TGG | - | chr7.2:63215782-63215801 | MS.gene67911:intron | 35.0% | |
| CCTTCCATAAGATCAAAAGT+GGG | + | chr7.2:63216272-63216291 | None:intergenic | 35.0% | |
| CTTATCATGGTCTATGAGTT+TGG | - | chr7.2:63215108-63215127 | MS.gene67911:intron | 35.0% | |
| GAAAATGATTGCATGCAAAG+TGG | - | chr7.2:63216122-63216141 | MS.gene67911:intron | 35.0% | |
| GAAAATTGGAGTTGAGACAT+GGG | - | chr7.2:63216307-63216326 | MS.gene67911:intron | 35.0% | |
| GGTTTCTTTCTATTTCAGGA+TGG | - | chr7.2:63215491-63215510 | MS.gene67911:intron | 35.0% | |
| GTTTAAACTATGTCTGACGA+GGG | + | chr7.2:63214963-63214982 | None:intergenic | 35.0% | |
| TAAGTGAAGAATCACCACAA+AGG | + | chr7.2:63215087-63215106 | None:intergenic | 35.0% | |
| TATGCTAGAGAAATCCTGAA+AGG | - | chr7.2:63216182-63216201 | MS.gene67911:intron | 35.0% | |
| TGGTACAAGCAAAACAGAAT+TGG | + | chr7.2:63215595-63215614 | None:intergenic | 35.0% | |
| ! | GGATACCTATGAAAAGGTTT+TGG | + | chr7.2:63214149-63214168 | None:intergenic | 35.0% |
| ! | TATTTCAGGATGGTCTTAAG+AGG | - | chr7.2:63215501-63215520 | MS.gene67911:intron | 35.0% |
| ! | TTTTGAATGTTTCAGGGATC+TGG | - | chr7.2:63216514-63216533 | MS.gene67911:CDS | 35.0% |
| ! | TTTTGATCTTATGGAAGGTG+AGG | - | chr7.2:63216274-63216293 | MS.gene67911:intron | 35.0% |
| !! | CACAGAAATGGATTAGAAAC+TGG | + | chr7.2:63215199-63215218 | None:intergenic | 35.0% |
| !! | GAGGTATTGACAGAGAAAAT+TGG | - | chr7.2:63216293-63216312 | MS.gene67911:intron | 35.0% |
| !! | TACGATTCTGATTGATTTGC+TGG | + | chr7.2:63215618-63215637 | None:intergenic | 35.0% |
| !! | TCCCAGATGTTTTGAATGAA+AGG | - | chr7.2:63213510-63213529 | MS.gene67911:intron | 35.0% |
| !! | TGATCTCATAATTCTAGAGC+TGG | - | chr7.2:63213475-63213494 | MS.gene67911:intron | 35.0% |
| !!! | TGGATATTTTAAAGTGGCCT+GGG | + | chr7.2:63214095-63214114 | None:intergenic | 35.0% |
| !!! | TTGGATATTTTAAAGTGGCC+TGG | + | chr7.2:63214096-63214115 | None:intergenic | 35.0% |
| AAAAATGTCTCCTCCTGACT+TGG | - | chr7.2:63214316-63214335 | MS.gene67911:CDS | 40.0% | |
| AAAGGTTCCTCATACCTTTG+TGG | - | chr7.2:63215070-63215089 | MS.gene67911:intron | 40.0% | |
| AAAGTGGGATGCATTTCATC+TGG | + | chr7.2:63216257-63216276 | None:intergenic | 40.0% | |
| AAGATCTACAGCCCTATATC+AGG | - | chr7.2:63216417-63216436 | MS.gene67911:intron | 40.0% | |
| AATGACATTAGAAAGCCGAG+TGG | - | chr7.2:63214608-63214627 | MS.gene67911:intron | 40.0% | |
| ACACTTAGACATATGTCACC+AGG | - | chr7.2:63213407-63213426 | MS.gene67911:CDS | 40.0% | |
| ACCTCTAAGCAACAAAGGAA+GGG | + | chr7.2:63214916-63214935 | None:intergenic | 40.0% | |
| ACTTGGCAAAAATTTGGCAC+TGG | - | chr7.2:63214333-63214352 | MS.gene67911:CDS | 40.0% | |
| ACTTTCTCTTACCTCCTTTC+AGG | + | chr7.2:63216199-63216218 | None:intergenic | 40.0% | |
| ATTGGATCATCATTAGCCGA+TGG | + | chr7.2:63216596-63216615 | None:intergenic | 40.0% | |
| ATTGTCTACACCAACTTCCT+AGG | + | chr7.2:63214696-63214715 | None:intergenic | 40.0% | |
| CATCATGAGGTCCAAAATCA+GGG | + | chr7.2:63213457-63213476 | None:intergenic | 40.0% | |
| CCACCACATATGAACTTCTA+TGG | + | chr7.2:63213956-63213975 | None:intergenic | 40.0% | |
| CCATAGAAGTTCATATGTGG+TGG | - | chr7.2:63213953-63213972 | MS.gene67911:CDS | 40.0% | |
| CGTTTAAACTATGTCTGACG+AGG | + | chr7.2:63214964-63214983 | None:intergenic | 40.0% | |
| CTGTGGAGATCAATGGATAT+TGG | - | chr7.2:63215919-63215938 | MS.gene67911:intron | 40.0% | |
| GAAACATCTCCAAACCTCAA+TGG | - | chr7.2:63213908-63213927 | MS.gene67911:CDS | 40.0% | |
| GAACTTGTAGGAGTTTCAAG+AGG | - | chr7.2:63214355-63214374 | MS.gene67911:CDS | 40.0% | |
| GAGAATCACGAATCTAGATC+AGG | - | chr7.2:63215816-63215835 | MS.gene67911:intron | 40.0% | |
| GAGCCATAGAAGTTCATATG+TGG | - | chr7.2:63213950-63213969 | MS.gene67911:CDS | 40.0% | |
| GAGTTACATGGACATGATTC+TGG | - | chr7.2:63215956-63215975 | MS.gene67911:intron | 40.0% | |
| GTGAATATGCTGGAATCAGA+TGG | - | chr7.2:63216044-63216063 | MS.gene67911:intron | 40.0% | |
| TAAGGAAAGAGAGAAAGGCA+GGG | + | chr7.2:63215459-63215478 | None:intergenic | 40.0% | |
| TCAATAAGCTCCATACTACC+AGG | + | chr7.2:63215711-63215730 | None:intergenic | 40.0% | |
| TCATCATGAGGTCCAAAATC+AGG | + | chr7.2:63213458-63213477 | None:intergenic | 40.0% | |
| TGGTAGTATGGAGCTTATTG+AGG | - | chr7.2:63215710-63215729 | MS.gene67911:intron | 40.0% | |
| TTGGAAAACTTGGGAAAGGA+AGG | + | chr7.2:63214861-63214880 | None:intergenic | 40.0% | |
| TTGTCTACACCAACTTCCTA+GGG | + | chr7.2:63214695-63214714 | None:intergenic | 40.0% | |
| ! | AACTCATATGCTCTGGCTTA+AGG | + | chr7.2:63213730-63213749 | None:intergenic | 40.0% |
| ! | AATTTGGCACTGGAACTTGT+AGG | - | chr7.2:63214343-63214362 | MS.gene67911:CDS | 40.0% |
| ! | ACTAGTTTGAAAACTCCCCT+AGG | - | chr7.2:63214739-63214758 | MS.gene67911:intron | 40.0% |
| ! | ACTCATATGCTCTGGCTTAA+GGG | + | chr7.2:63213729-63213748 | None:intergenic | 40.0% |
| ! | AGAATCACCACAAAGGTATG+AGG | + | chr7.2:63215080-63215099 | None:intergenic | 40.0% |
| ! | CAAATTTTTGCCAAGTCAGG+AGG | + | chr7.2:63214329-63214348 | None:intergenic | 40.0% |
| ! | CCAAAGTCGACTCTTATCAA+AGG | - | chr7.2:63215052-63215071 | MS.gene67911:intron | 40.0% |
| ! | CCTTTGATAAGAGTCGACTT+TGG | + | chr7.2:63215055-63215074 | None:intergenic | 40.0% |
| ! | GGAATCAGATGGATTTCCAA+AGG | - | chr7.2:63216055-63216074 | MS.gene67911:intron | 40.0% |
| ! | GTTGCATATCACCCTGATTT+TGG | - | chr7.2:63213443-63213462 | MS.gene67911:CDS | 40.0% |
| ! | TCTAGAGCTGGATGAGAAAT+TGG | - | chr7.2:63213487-63213506 | MS.gene67911:intron | 40.0% |
| ! | TGCCAAATTTTTGCCAAGTC+AGG | + | chr7.2:63214332-63214351 | None:intergenic | 40.0% |
| ! | TTCCTTTCCCAAGTTTTCCA+AGG | - | chr7.2:63214860-63214879 | MS.gene67911:intron | 40.0% |
| ! | TTTCAGAGAGCGTGCAAAAT+GGG | - | chr7.2:63216388-63216407 | MS.gene67911:intron | 40.0% |
| !! | CCCACTTTTGATCTTATGGA+AGG | - | chr7.2:63216269-63216288 | MS.gene67911:intron | 40.0% |
| !! | CTCCTGACTTGGCAAAAATT+TGG | - | chr7.2:63214327-63214346 | MS.gene67911:CDS | 40.0% |
| !! | GATTCTGATTGATTTGCTGG+TGG | + | chr7.2:63215615-63215634 | None:intergenic | 40.0% |
| !! | GATTTCCAAAGGTACTTGCA+AGG | - | chr7.2:63216066-63216085 | MS.gene67911:intron | 40.0% |
| !! | GCATCCCACTTTTGATCTTA+TGG | - | chr7.2:63216265-63216284 | MS.gene67911:intron | 40.0% |
| !! | TTTTCAGAGAGCGTGCAAAA+TGG | - | chr7.2:63216387-63216406 | MS.gene67911:intron | 40.0% |
| !!! | GAGAGCATTGTGCATCTTTT+TGG | - | chr7.2:63215015-63215034 | MS.gene67911:intron | 40.0% |
| AAACCTTCTGCAGAAAGACC+TGG | + | chr7.2:63216545-63216564 | None:intergenic | 45.0% | |
| AACTTGTCAAGCTATGCCCT+AGG | - | chr7.2:63214676-63214695 | MS.gene67911:intron | 45.0% | |
| AAGCTAGTGACGAGGAGTTA+AGG | - | chr7.2:63215874-63215893 | MS.gene67911:intron | 45.0% | |
| AGCTAGTGACGAGGAGTTAA+GGG | - | chr7.2:63215875-63215894 | MS.gene67911:intron | 45.0% | |
| AGGTGACCTCTAAGCAACAA+AGG | + | chr7.2:63214921-63214940 | None:intergenic | 45.0% | |
| ATTGCATGCAAAGTGGTGTG+TGG | - | chr7.2:63216129-63216148 | MS.gene67911:intron | 45.0% | |
| CAAAGAACTGCATCTTCGTC+AGG | + | chr7.2:63215531-63215550 | None:intergenic | 45.0% | |
| CAATGCCTTGCAAGTACCTT+TGG | + | chr7.2:63216074-63216093 | None:intergenic | 45.0% | |
| CACCTTGGAAAACTTGGGAA+AGG | + | chr7.2:63214865-63214884 | None:intergenic | 45.0% | |
| CACTCGAAAGACACAACCAT+CGG | - | chr7.2:63216577-63216596 | MS.gene67911:CDS | 45.0% | |
| CTTTCAGCTGTGGAGATCAA+TGG | - | chr7.2:63215912-63215931 | MS.gene67911:intron | 45.0% | |
| GACCTCTAAGCAACAAAGGA+AGG | + | chr7.2:63214917-63214936 | None:intergenic | 45.0% | |
| GACGACACCTTGGAAAACTT+GGG | + | chr7.2:63214870-63214889 | None:intergenic | 45.0% | |
| GCAACAGAAATCGATGATCC+TGG | + | chr7.2:63213428-63213447 | None:intergenic | 45.0% | |
| GCATTCTGTTGCTCTTCTCA+AGG | - | chr7.2:63214197-63214216 | MS.gene67911:CDS | 45.0% | |
| GCTAGAGAAATCCTGAAAGG+AGG | - | chr7.2:63216185-63216204 | MS.gene67911:intron | 45.0% | |
| GGGCAAAGTCTAATACTGAC+AGG | + | chr7.2:63214075-63214094 | None:intergenic | 45.0% | |
| GTAAGGAAAGAGAGAAAGGC+AGG | + | chr7.2:63215460-63215479 | None:intergenic | 45.0% | |
| GTCAGTATTAGACTTTGCCC+AGG | - | chr7.2:63214075-63214094 | MS.gene67911:CDS | 45.0% | |
| TCAAATGCATGACGACACCT+TGG | + | chr7.2:63214880-63214899 | None:intergenic | 45.0% | |
| TCTAAGTGAAGCTGACCACT+CGG | + | chr7.2:63214626-63214645 | None:intergenic | 45.0% | |
| TCTTCATGTCCTCCTTGAGT+TGG | - | chr7.2:63214825-63214844 | MS.gene67911:intron | 45.0% | |
| TGACGACACCTTGGAAAACT+TGG | + | chr7.2:63214871-63214890 | None:intergenic | 45.0% | |
| TGTGGAAGTTGGATGAGAAG+CGG | - | chr7.2:63216147-63216166 | MS.gene67911:intron | 45.0% | |
| TTGCTTGCATGTGTATGCCA+AGG | - | chr7.2:63216091-63216110 | MS.gene67911:intron | 45.0% | |
| ! | AGGTGTCGTCATGCATTTGA+AGG | - | chr7.2:63214880-63214899 | MS.gene67911:intron | 45.0% |
| ! | TGCACGCTCTCTGAAAAGAA+TGG | + | chr7.2:63216384-63216403 | None:intergenic | 45.0% |
| !! | ACTGACAGGTGAGCCATTTT+TGG | + | chr7.2:63214061-63214080 | None:intergenic | 45.0% |
| !!! | CTGACAGGTGAGCCATTTTT+GGG | + | chr7.2:63214060-63214079 | None:intergenic | 45.0% |
| !! | CTAATTAAAAAATATATTAA+GGG | + | chr7.2:63214170-63214189 | None:intergenic | 5.0% |
| !! | TCTAATTAAAAAATATATTA+AGG | + | chr7.2:63214171-63214190 | None:intergenic | 5.0% |
| !!! | AAAATTTTAATTAAAAGAAA+TGG | + | chr7.2:63215164-63215183 | None:intergenic | 5.0% |
| AGGGCAAAGAGAGCCTTTGA+GGG | + | chr7.2:63214944-63214963 | None:intergenic | 50.0% | |
| AGTGACGAGGAGTTAAGGGT+TGG | - | chr7.2:63215879-63215898 | MS.gene67911:intron | 50.0% | |
| ATTGCAGGCTCTTTCAGCTG+TGG | - | chr7.2:63215902-63215921 | MS.gene67911:intron | 50.0% | |
| CAAGCTATGCCCTAGGAAGT+TGG | - | chr7.2:63214683-63214702 | MS.gene67911:intron | 50.0% | |
| CTACATGCACCAACTCAAGG+AGG | + | chr7.2:63214837-63214856 | None:intergenic | 50.0% | |
| GCAAAGTGGTGTGTGGAAGT+TGG | - | chr7.2:63216136-63216155 | MS.gene67911:intron | 50.0% | |
| GGACTACATGCACCAACTCA+AGG | + | chr7.2:63214840-63214859 | None:intergenic | 50.0% | |
| GGAGTTAAGGGTTGGATTGC+AGG | - | chr7.2:63215887-63215906 | MS.gene67911:intron | 50.0% | |
| GTACCAGGTCTTTCTGCAGA+AGG | - | chr7.2:63216539-63216558 | MS.gene67911:CDS | 50.0% | |
| GTGGAAGTTGGATGAGAAGC+GGG | - | chr7.2:63216148-63216167 | MS.gene67911:intron | 50.0% | |
| TGGAAGGCAATGACGAGACA+CGG | + | chr7.2:63216343-63216362 | None:intergenic | 50.0% | |
| TTAGAGGTCACCTCCCTCAA+AGG | - | chr7.2:63214928-63214947 | MS.gene67911:intron | 50.0% | |
| TTCAGGGATCTGGATGTACC+AGG | - | chr7.2:63216524-63216543 | MS.gene67911:CDS | 50.0% | |
| ! | GAGAGCGTGCAAAATGGGAA+TGG | - | chr7.2:63216393-63216412 | MS.gene67911:intron | 50.0% |
| ! | GCCCTTCCTTTGTTGCTTAG+AGG | - | chr7.2:63214912-63214931 | MS.gene67911:intron | 50.0% |
| !! | AGAATGGAGAAGCGTTCAGC+TGG | + | chr7.2:63216368-63216387 | None:intergenic | 50.0% |
| AAGCGTTCAGCTGGAGTGGA+AGG | + | chr7.2:63216359-63216378 | None:intergenic | 55.0% | |
| ACAGCAGACTTCAGGAGGAG+CGG | - | chr7.2:63213382-63213401 | MS.gene67911:CDS | 55.0% | |
| AGGCAATGACGAGACACGGA+AGG | + | chr7.2:63216339-63216358 | None:intergenic | 55.0% | |
| CCAGAACCACAGCAGACTTC+AGG | - | chr7.2:63213374-63213393 | MS.gene67911:CDS | 55.0% | |
| CCTGAAGTCTGCTGTGGTTC+TGG | + | chr7.2:63213377-63213396 | None:intergenic | 55.0% | |
| GAACCACAGCAGACTTCAGG+AGG | - | chr7.2:63213377-63213396 | MS.gene67911:CDS | 55.0% | |
| GAGGGCAAAGAGAGCCTTTG+AGG | + | chr7.2:63214945-63214964 | None:intergenic | 55.0% | |
| ! | GCAAAGAGAGCCTTTGAGGG+AGG | + | chr7.2:63214941-63214960 | None:intergenic | 55.0% |
| GCTCCTCCTGAAGTCTGCTG+TGG | + | chr7.2:63213383-63213402 | None:intergenic | 60.0% | |
| !! | GGAGAAGCGTTCAGCTGGAG+TGG | + | chr7.2:63216363-63216382 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr7.2 | gene | 63213368 | 63216631 | 63213368 | ID=MS.gene67911 |
| chr7.2 | mRNA | 63213368 | 63216631 | 63213368 | ID=MS.gene67911.t1;Parent=MS.gene67911 |
| chr7.2 | exon | 63216468 | 63216631 | 63216468 | ID=MS.gene67911.t1.exon1;Parent=MS.gene67911.t1 |
| chr7.2 | CDS | 63216468 | 63216631 | 63216468 | ID=cds.MS.gene67911.t1;Parent=MS.gene67911.t1 |
| chr7.2 | exon | 63213561 | 63214490 | 63213561 | ID=MS.gene67911.t1.exon2;Parent=MS.gene67911.t1 |
| chr7.2 | CDS | 63213561 | 63214490 | 63213561 | ID=cds.MS.gene67911.t1;Parent=MS.gene67911.t1 |
| chr7.2 | exon | 63213368 | 63213470 | 63213368 | ID=MS.gene67911.t1.exon3;Parent=MS.gene67911.t1 |
| chr7.2 | CDS | 63213368 | 63213470 | 63213368 | ID=cds.MS.gene67911.t1;Parent=MS.gene67911.t1 |
| Gene Sequence |
| Protein sequence |
