Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68021.t1 | XP_003591993.1 | 98.8 | 405 | 5 | 0 | 1 | 405 | 57 | 461 | 3.20E-227 | 797.3 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68021.t1 | G7L166 | 32.7 | 413 | 226 | 13 | 14 | 403 | 290 | 673 | 2.3e-48 | 194.5 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68021.t1 | G7IAF8 | 98.8 | 405 | 5 | 0 | 1 | 405 | 57 | 461 | 2.3e-227 | 797.3 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene68021.t1 | TF | GRAS |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene051199 | MS.gene68021 | 0.808643 | 2.80E-50 | -1.69E-46 |
MS.gene051719 | MS.gene68021 | 0.807053 | 6.10E-50 | -1.69E-46 |
MS.gene051720 | MS.gene68021 | 0.803505 | 3.38E-49 | -1.69E-46 |
MS.gene055359 | MS.gene68021 | 0.804218 | 2.40E-49 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68021.t1 | MTR_1g096030 | 98.765 | 405 | 5 | 0 | 1 | 405 | 57 | 461 | 0.0 | 830 |
MS.gene68021.t1 | MTR_7g027190 | 33.898 | 413 | 221 | 14 | 14 | 403 | 290 | 673 | 6.22e-64 | 217 |
MS.gene68021.t1 | MTR_7g074650 | 32.718 | 379 | 222 | 10 | 29 | 403 | 443 | 792 | 1.93e-52 | 187 |
MS.gene68021.t1 | MTR_4g102790 | 32.426 | 404 | 232 | 13 | 18 | 405 | 286 | 664 | 3.73e-52 | 185 |
MS.gene68021.t1 | MTR_3g065980 | 31.463 | 410 | 222 | 15 | 18 | 403 | 166 | 540 | 1.20e-50 | 179 |
MS.gene68021.t1 | MTR_5g097480 | 31.311 | 412 | 238 | 13 | 7 | 403 | 163 | 544 | 9.91e-49 | 173 |
MS.gene68021.t1 | MTR_3g089055 | 28.967 | 397 | 238 | 12 | 23 | 403 | 197 | 565 | 6.94e-46 | 166 |
MS.gene68021.t1 | MTR_3g089055 | 28.967 | 397 | 238 | 12 | 23 | 403 | 202 | 570 | 8.40e-46 | 166 |
MS.gene68021.t1 | MTR_1g029420 | 29.723 | 397 | 235 | 12 | 23 | 403 | 224 | 592 | 9.27e-46 | 166 |
MS.gene68021.t1 | MTR_4g104020 | 29.854 | 412 | 233 | 15 | 16 | 403 | 141 | 520 | 3.04e-45 | 164 |
MS.gene68021.t1 | MTR_5g094450 | 29.064 | 406 | 234 | 14 | 21 | 403 | 158 | 532 | 5.64e-45 | 163 |
MS.gene68021.t1 | MTR_4g077760 | 32.161 | 398 | 225 | 13 | 20 | 403 | 189 | 555 | 4.64e-44 | 161 |
MS.gene68021.t1 | MTR_3g056110 | 28.894 | 398 | 241 | 13 | 21 | 403 | 172 | 542 | 1.62e-43 | 159 |
MS.gene68021.t1 | MTR_1g069725 | 30.576 | 399 | 232 | 15 | 14 | 402 | 99 | 462 | 7.65e-43 | 156 |
MS.gene68021.t1 | MTR_4g133660 | 30.348 | 402 | 233 | 15 | 19 | 402 | 170 | 542 | 1.03e-41 | 154 |
MS.gene68021.t1 | MTR_5g058860 | 30.602 | 415 | 241 | 12 | 14 | 405 | 109 | 499 | 2.19e-41 | 153 |
MS.gene68021.t1 | MTR_4g064200 | 30.025 | 403 | 237 | 13 | 16 | 402 | 276 | 649 | 5.38e-41 | 154 |
MS.gene68021.t1 | MTR_3g072710 | 31.221 | 426 | 220 | 16 | 14 | 402 | 110 | 499 | 1.07e-40 | 151 |
MS.gene68021.t1 | MTR_2g082090 | 30.549 | 419 | 226 | 16 | 14 | 403 | 197 | 579 | 1.36e-40 | 152 |
MS.gene68021.t1 | MTR_4g076020 | 29.457 | 387 | 215 | 11 | 29 | 403 | 89 | 429 | 7.61e-40 | 147 |
MS.gene68021.t1 | MTR_2g026250 | 30.159 | 378 | 210 | 14 | 47 | 403 | 252 | 596 | 1.28e-37 | 144 |
MS.gene68021.t1 | MTR_8g442410 | 29.157 | 415 | 231 | 17 | 16 | 403 | 147 | 525 | 2.99e-37 | 142 |
MS.gene68021.t1 | MTR_4g064150 | 29.750 | 400 | 238 | 14 | 21 | 402 | 358 | 732 | 1.65e-36 | 141 |
MS.gene68021.t1 | MTR_4g064120 | 29.188 | 394 | 236 | 13 | 21 | 396 | 251 | 619 | 1.81e-35 | 138 |
MS.gene68021.t1 | MTR_4g064180 | 29.640 | 361 | 222 | 12 | 21 | 363 | 251 | 597 | 1.08e-34 | 135 |
MS.gene68021.t1 | MTR_2g097310 | 29.146 | 398 | 231 | 15 | 24 | 402 | 272 | 637 | 3.49e-34 | 134 |
MS.gene68021.t1 | MTR_7g062120 | 27.204 | 397 | 244 | 14 | 24 | 403 | 372 | 740 | 9.66e-34 | 133 |
MS.gene68021.t1 | MTR_2g097467 | 26.087 | 414 | 259 | 13 | 5 | 402 | 271 | 653 | 5.09e-33 | 131 |
MS.gene68021.t1 | MTR_2g097410 | 26.895 | 409 | 244 | 14 | 17 | 402 | 364 | 740 | 8.24e-33 | 130 |
MS.gene68021.t1 | MTR_2g097463 | 26.263 | 396 | 250 | 11 | 21 | 402 | 287 | 654 | 1.22e-31 | 127 |
MS.gene68021.t1 | MTR_2g097473 | 25.758 | 396 | 249 | 12 | 21 | 402 | 289 | 653 | 6.80e-31 | 125 |
MS.gene68021.t1 | MTR_4g064160 | 28.173 | 394 | 242 | 15 | 24 | 402 | 316 | 683 | 2.80e-30 | 123 |
MS.gene68021.t1 | MTR_2g097390 | 27.157 | 394 | 244 | 13 | 24 | 402 | 275 | 640 | 7.75e-30 | 122 |
MS.gene68021.t1 | MTR_2g034260 | 25.598 | 418 | 260 | 13 | 9 | 403 | 195 | 584 | 8.55e-30 | 121 |
MS.gene68021.t1 | MTR_2g097350 | 27.411 | 394 | 243 | 15 | 24 | 402 | 274 | 639 | 8.54e-29 | 119 |
MS.gene68021.t1 | MTR_4g097080 | 25.495 | 404 | 246 | 14 | 23 | 403 | 132 | 503 | 2.28e-28 | 116 |
MS.gene68021.t1 | MTR_2g034250 | 25.542 | 415 | 265 | 12 | 9 | 403 | 195 | 585 | 6.27e-28 | 116 |
MS.gene68021.t1 | MTR_8g093070 | 30.303 | 396 | 226 | 17 | 21 | 402 | 136 | 495 | 2.21e-27 | 114 |
MS.gene68021.t1 | MTR_3g022830 | 23.266 | 447 | 259 | 12 | 15 | 403 | 16 | 436 | 3.07e-27 | 112 |
MS.gene68021.t1 | MTR_2g034280 | 25.647 | 425 | 249 | 15 | 9 | 403 | 188 | 575 | 3.49e-27 | 114 |
MS.gene68021.t1 | MTR_5g015490 | 27.451 | 408 | 239 | 15 | 23 | 403 | 113 | 490 | 4.56e-27 | 112 |
MS.gene68021.t1 | MTR_2g097380 | 30.488 | 328 | 177 | 16 | 31 | 340 | 231 | 525 | 5.62e-27 | 113 |
MS.gene68021.t1 | MTR_7g109580 | 25.845 | 414 | 255 | 14 | 11 | 405 | 176 | 556 | 1.67e-26 | 111 |
MS.gene68021.t1 | MTR_0092s0100 | 26.368 | 402 | 235 | 16 | 21 | 403 | 369 | 728 | 2.60e-20 | 93.6 |
MS.gene68021.t1 | MTR_0092s0100 | 26.368 | 402 | 235 | 16 | 21 | 403 | 372 | 731 | 2.72e-20 | 93.6 |
MS.gene68021.t1 | MTR_6g047750 | 26.895 | 409 | 227 | 15 | 25 | 403 | 296 | 662 | 6.37e-20 | 92.4 |
MS.gene68021.t1 | MTR_4g076140 | 28.889 | 225 | 150 | 4 | 15 | 237 | 39 | 255 | 2.63e-19 | 90.1 |
MS.gene68021.t1 | MTR_4g076140 | 31.325 | 166 | 96 | 4 | 239 | 404 | 323 | 470 | 5.26e-18 | 85.9 |
MS.gene68021.t1 | MTR_7g057230 | 26.263 | 396 | 240 | 13 | 25 | 402 | 295 | 656 | 2.81e-19 | 90.5 |
MS.gene68021.t1 | MTR_5g009080 | 27.473 | 273 | 160 | 9 | 15 | 280 | 47 | 288 | 3.22e-19 | 89.7 |
MS.gene68021.t1 | MTR_5g009080 | 29.070 | 172 | 104 | 4 | 233 | 404 | 326 | 479 | 9.10e-19 | 88.6 |
MS.gene68021.t1 | MTR_5g015950 | 23.333 | 450 | 252 | 14 | 20 | 402 | 22 | 445 | 9.22e-19 | 88.2 |
MS.gene68021.t1 | MTR_3g053270 | 23.333 | 450 | 252 | 14 | 20 | 402 | 22 | 445 | 9.22e-19 | 88.2 |
MS.gene68021.t1 | MTR_2g089100 | 21.362 | 426 | 267 | 12 | 17 | 402 | 45 | 442 | 1.35e-18 | 87.8 |
MS.gene68021.t1 | MTR_2g099110 | 24.590 | 366 | 240 | 11 | 55 | 403 | 105 | 451 | 2.31e-17 | 84.0 |
MS.gene68021.t1 | MTR_8g020840 | 23.227 | 409 | 256 | 14 | 23 | 403 | 170 | 548 | 1.40e-12 | 69.7 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68021.t1 | AT3G54220 | 35.323 | 402 | 212 | 12 | 14 | 402 | 283 | 649 | 1.78e-55 | 194 |
MS.gene68021.t1 | AT1G14920 | 32.767 | 412 | 225 | 16 | 7 | 403 | 155 | 529 | 8.58e-54 | 187 |
MS.gene68021.t1 | AT2G04890 | 32.648 | 389 | 225 | 12 | 24 | 403 | 53 | 413 | 1.96e-52 | 181 |
MS.gene68021.t1 | AT3G03450 | 32.587 | 402 | 222 | 16 | 18 | 403 | 177 | 545 | 6.73e-51 | 179 |
MS.gene68021.t1 | AT5G41920 | 32.108 | 408 | 229 | 12 | 10 | 404 | 29 | 401 | 1.18e-50 | 176 |
MS.gene68021.t1 | AT1G21450 | 30.982 | 397 | 231 | 12 | 23 | 403 | 224 | 593 | 1.15e-49 | 177 |
MS.gene68021.t1 | AT2G01570 | 30.941 | 404 | 223 | 16 | 17 | 403 | 217 | 581 | 1.19e-49 | 177 |
MS.gene68021.t1 | AT5G17490 | 32.039 | 412 | 224 | 18 | 8 | 403 | 145 | 516 | 1.23e-48 | 173 |
MS.gene68021.t1 | AT1G66350 | 31.078 | 399 | 221 | 16 | 18 | 403 | 149 | 506 | 1.51e-47 | 170 |
MS.gene68021.t1 | AT5G48150 | 30.380 | 395 | 232 | 13 | 25 | 403 | 123 | 490 | 3.92e-47 | 168 |
MS.gene68021.t1 | AT5G48150 | 30.380 | 395 | 232 | 13 | 25 | 403 | 123 | 490 | 3.92e-47 | 168 |
MS.gene68021.t1 | AT5G48150 | 30.380 | 395 | 232 | 13 | 25 | 403 | 123 | 490 | 3.92e-47 | 168 |
MS.gene68021.t1 | AT5G48150 | 30.380 | 395 | 232 | 13 | 25 | 403 | 123 | 490 | 3.92e-47 | 168 |
MS.gene68021.t1 | AT1G55580 | 30.841 | 428 | 228 | 15 | 21 | 403 | 41 | 445 | 4.84e-47 | 167 |
MS.gene68021.t1 | AT1G63100 | 29.381 | 388 | 227 | 11 | 43 | 404 | 264 | 630 | 1.65e-46 | 169 |
MS.gene68021.t1 | AT1G63100 | 29.381 | 388 | 227 | 11 | 43 | 404 | 289 | 655 | 2.48e-46 | 169 |
MS.gene68021.t1 | AT5G66770 | 32.658 | 395 | 229 | 14 | 20 | 403 | 216 | 584 | 1.72e-45 | 166 |
MS.gene68021.t1 | AT4G08250 | 31.127 | 408 | 238 | 14 | 14 | 404 | 97 | 478 | 7.58e-43 | 156 |
MS.gene68021.t1 | AT3G50650 | 33.155 | 374 | 214 | 12 | 42 | 403 | 193 | 542 | 3.22e-42 | 156 |
MS.gene68021.t1 | AT1G50600 | 29.873 | 395 | 235 | 12 | 24 | 403 | 159 | 526 | 5.80e-42 | 155 |
MS.gene68021.t1 | AT1G50600 | 29.873 | 395 | 235 | 12 | 24 | 403 | 234 | 601 | 2.33e-41 | 154 |
MS.gene68021.t1 | AT1G50600 | 29.873 | 395 | 235 | 12 | 24 | 403 | 230 | 597 | 2.45e-41 | 154 |
MS.gene68021.t1 | AT4G17230 | 29.777 | 403 | 235 | 12 | 19 | 403 | 153 | 525 | 1.90e-37 | 142 |
MS.gene68021.t1 | AT4G17230 | 29.777 | 403 | 235 | 12 | 19 | 403 | 153 | 525 | 1.90e-37 | 142 |
MS.gene68021.t1 | AT1G50420 | 27.015 | 459 | 238 | 17 | 15 | 403 | 48 | 479 | 3.76e-32 | 127 |
MS.gene68021.t1 | AT2G29060 | 27.456 | 397 | 250 | 13 | 24 | 405 | 284 | 657 | 4.74e-32 | 128 |
MS.gene68021.t1 | AT2G29060 | 27.456 | 397 | 250 | 13 | 24 | 405 | 321 | 694 | 5.34e-32 | 128 |
MS.gene68021.t1 | AT2G37650 | 25.628 | 398 | 253 | 13 | 21 | 403 | 332 | 701 | 2.76e-30 | 123 |
MS.gene68021.t1 | AT2G37650 | 25.628 | 398 | 253 | 13 | 21 | 403 | 344 | 713 | 3.95e-30 | 123 |
MS.gene68021.t1 | AT2G29065 | 25.980 | 408 | 241 | 16 | 24 | 402 | 252 | 627 | 1.91e-29 | 120 |
MS.gene68021.t1 | AT1G07530 | 26.396 | 394 | 250 | 14 | 24 | 402 | 396 | 764 | 1.66e-28 | 118 |
MS.gene68021.t1 | AT3G46600 | 26.263 | 396 | 250 | 13 | 23 | 403 | 3 | 371 | 2.68e-28 | 114 |
MS.gene68021.t1 | AT3G46600 | 26.329 | 395 | 251 | 13 | 23 | 403 | 211 | 579 | 1.33e-27 | 115 |
MS.gene68021.t1 | AT3G46600 | 26.329 | 395 | 251 | 13 | 23 | 403 | 179 | 547 | 1.68e-27 | 114 |
MS.gene68021.t1 | AT1G07520 | 25.187 | 401 | 252 | 15 | 24 | 402 | 154 | 528 | 1.92e-27 | 114 |
MS.gene68021.t1 | AT1G07520 | 25.187 | 401 | 252 | 15 | 24 | 402 | 154 | 528 | 1.92e-27 | 114 |
MS.gene68021.t1 | AT1G07520 | 25.187 | 401 | 252 | 15 | 24 | 402 | 319 | 693 | 2.65e-27 | 114 |
MS.gene68021.t1 | AT1G07520 | 25.187 | 401 | 252 | 15 | 24 | 402 | 318 | 692 | 3.07e-27 | 114 |
MS.gene68021.t1 | AT5G59450 | 25.369 | 406 | 259 | 13 | 16 | 403 | 219 | 598 | 3.29e-27 | 114 |
MS.gene68021.t1 | AT3G60630 | 29.755 | 326 | 179 | 13 | 96 | 403 | 329 | 622 | 4.03e-26 | 110 |
MS.gene68021.t1 | AT4G37650 | 23.716 | 409 | 258 | 13 | 24 | 403 | 146 | 529 | 4.95e-22 | 98.6 |
MS.gene68021.t1 | AT2G45160 | 28.682 | 387 | 208 | 18 | 41 | 403 | 297 | 639 | 1.09e-21 | 97.8 |
MS.gene68021.t1 | AT5G52510 | 25.679 | 405 | 242 | 16 | 25 | 403 | 269 | 640 | 1.23e-21 | 97.4 |
MS.gene68021.t1 | AT4G00150 | 27.446 | 368 | 208 | 17 | 49 | 403 | 233 | 554 | 4.83e-21 | 95.5 |
MS.gene68021.t1 | AT4G36710 | 24.510 | 408 | 263 | 14 | 9 | 403 | 110 | 485 | 3.09e-20 | 92.8 |
MS.gene68021.t1 | AT3G49950 | 23.058 | 412 | 252 | 13 | 23 | 402 | 29 | 407 | 2.41e-19 | 89.7 |
Find 0 sgRNAs with CRISPR-Local
Find 70 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AATATGAAAAAATGGAAACA+TGG | - | 5087:8463-8482 | MS.gene68021:CDS | 20.0% |
!! | AATCAATAACATGAATAGAA+CGG | + | 5087:7885-7904 | MS.gene68021:intergenic | 20.0% |
!! | GATCAAGAGTAATTAATTTA+AGG | - | 5087:8103-8122 | MS.gene68021:CDS | 20.0% |
!! | TTGTGCAAAATATGAAAAAA+TGG | - | 5087:8455-8474 | MS.gene68021:CDS | 20.0% |
!!! | ACAACTCATTTTGTTTAAAT+AGG | + | 5087:8166-8185 | MS.gene68021:intergenic | 20.0% |
!!! | ATTGATTTTGATGTTTCATA+TGG | - | 5087:7898-7917 | MS.gene68021:CDS | 20.0% |
! | ATTGAAAATAACTGACACAT+TGG | - | 5087:8188-8207 | MS.gene68021:CDS | 25.0% |
! | TTGAAAATAACTGACACATT+GGG | - | 5087:8189-8208 | MS.gene68021:CDS | 25.0% |
!! | AAATGAGCAAATTGGTAATA+CGG | + | 5087:7808-7827 | MS.gene68021:intergenic | 25.0% |
!! | ATGTTTCATATGGTTTTCAA+TGG | - | 5087:7908-7927 | MS.gene68021:CDS | 25.0% |
!!! | AACATTGTTTTTGAGTTTCA+AGG | - | 5087:8069-8088 | MS.gene68021:CDS | 25.0% |
!!! | TTTCTCTTCTTCTTTTTCAA+AGG | + | 5087:7857-7876 | MS.gene68021:intergenic | 25.0% |
AAAAGTAGAATGGAGAATCA+TGG | - | 5087:8486-8505 | MS.gene68021:CDS | 30.0% | |
AAGGTTAAGAATTGAGAAGA+AGG | - | 5087:8371-8390 | MS.gene68021:CDS | 30.0% | |
ACCATTCTATGAAATGTTGA+TGG | - | 5087:7726-7745 | MS.gene68021:CDS | 30.0% | |
AGAATCTCTTTCAGATTAAC+TGG | - | 5087:7976-7995 | MS.gene68021:CDS | 30.0% | |
CTCAACATTGAAGATTCAAA+TGG | - | 5087:7523-7542 | MS.gene68021:CDS | 30.0% | |
GAAGAAGAAAAATGAAACTG+TGG | - | 5087:8125-8144 | MS.gene68021:CDS | 30.0% | |
GTGAGAAGTAAGTGAATTAA+TGG | + | 5087:7553-7572 | MS.gene68021:intergenic | 30.0% | |
TCCATCAACATTTCATAGAA+TGG | + | 5087:7730-7749 | MS.gene68021:intergenic | 30.0% | |
TTATTGTCCACTTCAATTTG+AGG | - | 5087:8578-8597 | MS.gene68021:CDS | 30.0% | |
TTGTTCAACAACAACAACAA+TGG | + | 5087:8238-8257 | MS.gene68021:intergenic | 30.0% | |
! | AATAACTATGATGATGTGGA+TGG | - | 5087:8423-8442 | MS.gene68021:CDS | 30.0% |
! | AGAATTGAGAAGAAGGTTTT+TGG | - | 5087:8378-8397 | MS.gene68021:CDS | 30.0% |
! | AGGTTAGTTAGTTTCTCAAA+AGG | - | 5087:8039-8058 | MS.gene68021:CDS | 30.0% |
! | GCTTAATAACTATGATGATG+TGG | - | 5087:8419-8438 | MS.gene68021:CDS | 30.0% |
! | TCTTTCAGATTAACTGGTTT+CGG | - | 5087:7982-8001 | MS.gene68021:CDS | 30.0% |
! | TTCTGTTGATGAAAACAACT+TGG | - | 5087:7582-7601 | MS.gene68021:CDS | 30.0% |
!! | GTTAGTTTCTCAAAAGGTTT+TGG | - | 5087:8045-8064 | MS.gene68021:CDS | 30.0% |
!!! | AGAATGGTGATTTTTTTGTG+AGG | + | 5087:7714-7733 | MS.gene68021:intergenic | 30.0% |
AACCTTTCAATACTCTCAAG+TGG | + | 5087:8357-8376 | MS.gene68021:intergenic | 35.0% | |
AGCTTCAAGAAACTGAATCT+AGG | - | 5087:8019-8038 | MS.gene68021:CDS | 35.0% | |
ATGGAGAATCATGGATTTGT+TGG | - | 5087:8495-8514 | MS.gene68021:CDS | 35.0% | |
CAACAACAACAACAATGGAA+GGG | + | 5087:8233-8252 | MS.gene68021:intergenic | 35.0% | |
CTGTTTGGTAAAGATCTGTT+AGG | + | 5087:7624-7643 | MS.gene68021:intergenic | 35.0% | |
CTTGATAAGAAGGTTCTACT+AGG | + | 5087:8276-8295 | MS.gene68021:intergenic | 35.0% | |
CTTTCAGAAAAAGCAACAAG+TGG | - | 5087:7949-7968 | MS.gene68021:CDS | 35.0% | |
GAAAGTGATTGAATCAGTGA+AGG | + | 5087:7934-7953 | MS.gene68021:intergenic | 35.0% | |
GAAGAAAAATGAAACTGTGG+CGG | - | 5087:8128-8147 | MS.gene68021:CDS | 35.0% | |
GGAAACATGGAAAAGTAGAA+TGG | - | 5087:8476-8495 | MS.gene68021:CDS | 35.0% | |
GTCTGTGAATCTTGATAAGA+AGG | + | 5087:8286-8305 | MS.gene68021:intergenic | 35.0% | |
TCAACAACAACAACAATGGA+AGG | + | 5087:8234-8253 | MS.gene68021:intergenic | 35.0% | |
TTGCTGTGAAATGAGCAAAT+TGG | + | 5087:7816-7835 | MS.gene68021:intergenic | 35.0% | |
! | GAGTTTTGCAGTTAAACCAT+CGG | + | 5087:7692-7711 | MS.gene68021:intergenic | 35.0% |
! | GTTGTTGTTGTTGAACAAGA+AGG | - | 5087:8240-8259 | MS.gene68021:CDS | 35.0% |
!! | GAGTTTCAAGGTTTGTTAAG+AGG | - | 5087:8081-8100 | MS.gene68021:CDS | 35.0% |
!! | TACCACTTGAGAGTATTGAA+AGG | - | 5087:8352-8371 | MS.gene68021:CDS | 35.0% |
!! | TCTCTTTAGGATGGCAAAAT+AGG | - | 5087:8652-8671 | MS.gene68021:CDS | 35.0% |
!! | TTCAGAAAGAGATGATGGAA+GGG | - | 5087:8626-8645 | MS.gene68021:CDS | 35.0% |
!! | TTTCAGAAAGAGATGATGGA+AGG | - | 5087:8625-8644 | MS.gene68021:CDS | 35.0% |
AGGGTTTCAGAAAGAGATGA+TGG | - | 5087:8621-8640 | MS.gene68021:CDS | 40.0% | |
CACAGCAAATCAAGCTATCT+TGG | - | 5087:7828-7847 | MS.gene68021:CDS | 40.0% | |
CCACTTCAATTTGAGGAAGA+AGG | - | 5087:8585-8604 | MS.gene68021:CDS | 40.0% | |
CCTTCTTCCTCAAATTGAAG+TGG | + | 5087:8588-8607 | MS.gene68021:intergenic | 40.0% | |
CTTCAATTTGAGGAAGAAGG+TGG | - | 5087:8588-8607 | MS.gene68021:CDS | 40.0% | |
! | AACTATGATGATGTGGATGG+TGG | - | 5087:8426-8445 | MS.gene68021:CDS | 40.0% |
! | AGAAACTCTTCGTCGATTGT+TGG | + | 5087:7757-7776 | MS.gene68021:intergenic | 40.0% |
! | TTTTGCTTACTGTGTCAGCA+TGG | - | 5087:8676-8695 | MS.gene68021:CDS | 40.0% |
CAATTTGAGGAAGAAGGTGG+TGG | - | 5087:8591-8610 | MS.gene68021:CDS | 45.0% | |
GACACGTTGAACTGAATCAC+CGG | + | 5087:7656-7675 | MS.gene68021:intergenic | 45.0% | |
GATGGAAGGGCTATCTCTTT+AGG | - | 5087:8639-8658 | MS.gene68021:CDS | 45.0% | |
TACCAAACAGTTTCCCTCAC+CGG | - | 5087:7634-7653 | MS.gene68021:CDS | 45.0% | |
TTGAACTGAATCACCGGTGA+GGG | + | 5087:7650-7669 | MS.gene68021:intergenic | 45.0% | |
! | GAAGGGCTATCTCTTTAGGA+TGG | - | 5087:8643-8662 | MS.gene68021:CDS | 45.0% |
GTCGTCGCATATTTCACCGA+TGG | - | 5087:7673-7692 | MS.gene68021:CDS | 50.0% | |
GTTGAACTGAATCACCGGTG+AGG | + | 5087:7651-7670 | MS.gene68021:intergenic | 50.0% | |
! | TTTGAGGAAGAAGGTGGTGG+TGG | - | 5087:8594-8613 | MS.gene68021:CDS | 50.0% |
!! | AAGAAGGTGGTGGTGGTTTC+AGG | - | 5087:8601-8620 | MS.gene68021:CDS | 50.0% |
!! | AGAAGGTGGTGGTGGTTTCA+GGG | - | 5087:8602-8621 | MS.gene68021:CDS | 50.0% |
CACCGGTGAGGGAAACTGTT+TGG | + | 5087:7639-7658 | MS.gene68021:intergenic | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
5087 | gene | 7493 | 8710 | 7493 | ID=MS.gene68021 |
5087 | mRNA | 7493 | 8710 | 7493 | ID=MS.gene68021.t1;Parent=MS.gene68021 |
5087 | exon | 7493 | 8710 | 7493 | ID=MS.gene68021.t1.exon1;Parent=MS.gene68021.t1 |
5087 | CDS | 7493 | 8710 | 7493 | ID=cds.MS.gene68021.t1;Parent=MS.gene68021.t1 |
Gene Sequence |
Protein sequence |