Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68310.t1 | XP_003613319.1 | 48.4 | 279 | 129 | 2 | 6 | 284 | 657 | 920 | 8.50E-55 | 224.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68310.t1 | Q7XA40 | 23.9 | 285 | 198 | 5 | 1 | 285 | 627 | 892 | 4.9e-11 | 70.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68310.t1 | G7K2V1 | 48.4 | 279 | 129 | 2 | 6 | 284 | 657 | 920 | 6.1e-55 | 224.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene052698 | MS.gene68310 | 0.807704 | 4.44E-50 | -1.69E-46 |
| MS.gene055359 | MS.gene68310 | 0.808334 | 3.26E-50 | -1.69E-46 |
| MS.gene058168 | MS.gene68310 | 0.835925 | 1.26E-56 | -1.69E-46 |
| MS.gene059006 | MS.gene68310 | 0.805231 | 1.48E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68310.t1 | MTR_5g035480 | 63.359 | 393 | 72 | 5 | 1 | 368 | 642 | 987 | 8.99e-144 | 434 |
| MS.gene68310.t1 | MTR_5g035200 | 59.733 | 375 | 134 | 5 | 9 | 382 | 1 | 359 | 6.07e-136 | 394 |
| MS.gene68310.t1 | MTR_5g037500 | 54.774 | 398 | 140 | 5 | 1 | 373 | 592 | 974 | 2.88e-111 | 349 |
| MS.gene68310.t1 | MTR_5g035280 | 50.113 | 441 | 132 | 7 | 1 | 368 | 654 | 1079 | 4.59e-110 | 350 |
| MS.gene68310.t1 | MTR_3g026660 | 48.590 | 461 | 148 | 8 | 1 | 388 | 641 | 1085 | 2.52e-105 | 335 |
| MS.gene68310.t1 | MTR_3g026660 | 48.590 | 461 | 148 | 8 | 1 | 388 | 698 | 1142 | 6.36e-105 | 335 |
| MS.gene68310.t1 | MTR_5g035240 | 56.287 | 334 | 127 | 6 | 1 | 331 | 652 | 969 | 9.38e-100 | 318 |
| MS.gene68310.t1 | MTR_5g037450 | 46.606 | 442 | 143 | 8 | 1 | 368 | 664 | 1086 | 9.55e-100 | 320 |
| MS.gene68310.t1 | MTR_5g040770 | 49.873 | 395 | 155 | 9 | 1 | 368 | 423 | 801 | 5.34e-94 | 300 |
| MS.gene68310.t1 | MTR_5g035530 | 47.721 | 373 | 173 | 7 | 1 | 370 | 539 | 892 | 6.71e-86 | 281 |
| MS.gene68310.t1 | MTR_5g034770 | 57.202 | 243 | 66 | 6 | 1 | 212 | 638 | 873 | 3.39e-67 | 230 |
| MS.gene68310.t1 | MTR_5g034770 | 68.224 | 107 | 33 | 1 | 263 | 368 | 758 | 864 | 7.30e-27 | 113 |
| MS.gene68310.t1 | MTR_5g037460 | 44.718 | 284 | 129 | 7 | 1 | 258 | 521 | 802 | 4.29e-55 | 195 |
| MS.gene68310.t1 | MTR_5g037460 | 38.788 | 165 | 86 | 4 | 208 | 368 | 634 | 787 | 9.47e-17 | 82.8 |
| MS.gene68310.t1 | MTR_7g071940 | 38.462 | 377 | 209 | 10 | 1 | 373 | 641 | 998 | 1.52e-53 | 191 |
| MS.gene68310.t1 | MTR_5g071310 | 39.200 | 375 | 182 | 11 | 1 | 373 | 616 | 946 | 9.11e-53 | 189 |
| MS.gene68310.t1 | MTR_1g023600 | 39.153 | 378 | 204 | 11 | 1 | 373 | 646 | 1002 | 9.62e-52 | 186 |
| MS.gene68310.t1 | MTR_5g071823 | 37.135 | 377 | 213 | 12 | 1 | 373 | 648 | 1004 | 1.02e-51 | 186 |
| MS.gene68310.t1 | MTR_5g071850 | 37.135 | 377 | 213 | 12 | 1 | 373 | 648 | 1004 | 1.02e-51 | 186 |
| MS.gene68310.t1 | MTR_3g086070 | 30.803 | 461 | 212 | 12 | 1 | 373 | 641 | 1082 | 1.36e-50 | 183 |
| MS.gene68310.t1 | MTR_6g046620 | 32.584 | 445 | 208 | 12 | 1 | 373 | 594 | 1018 | 1.47e-50 | 183 |
| MS.gene68310.t1 | MTR_1g022380 | 37.598 | 383 | 203 | 13 | 1 | 373 | 644 | 1000 | 2.32e-50 | 182 |
| MS.gene68310.t1 | MTR_4g055630 | 34.793 | 411 | 202 | 12 | 1 | 373 | 652 | 1034 | 6.72e-49 | 178 |
| MS.gene68310.t1 | MTR_5g071220 | 37.121 | 396 | 209 | 13 | 1 | 383 | 649 | 1017 | 1.09e-48 | 177 |
| MS.gene68310.t1 | MTR_5g071220 | 37.121 | 396 | 209 | 13 | 1 | 383 | 649 | 1017 | 1.18e-48 | 177 |
| MS.gene68310.t1 | MTR_5g071670 | 37.135 | 377 | 187 | 11 | 1 | 373 | 642 | 972 | 1.52e-48 | 177 |
| MS.gene68310.t1 | MTR_5g071670 | 32.804 | 189 | 108 | 9 | 17 | 191 | 1132 | 1315 | 2.40e-11 | 66.2 |
| MS.gene68310.t1 | MTR_0133s0020 | 31.278 | 454 | 214 | 12 | 1 | 373 | 649 | 1085 | 4.79e-47 | 173 |
| MS.gene68310.t1 | MTR_5g072340 | 37.234 | 376 | 188 | 11 | 1 | 373 | 651 | 981 | 1.66e-46 | 171 |
| MS.gene68310.t1 | MTR_5g070960 | 36.842 | 380 | 211 | 13 | 1 | 373 | 651 | 1008 | 1.99e-46 | 171 |
| MS.gene68310.t1 | MTR_5g071780 | 38.133 | 375 | 205 | 13 | 4 | 373 | 651 | 1003 | 2.54e-46 | 171 |
| MS.gene68310.t1 | MTR_6g046440 | 31.020 | 461 | 212 | 12 | 1 | 373 | 585 | 1027 | 3.20e-46 | 170 |
| MS.gene68310.t1 | MTR_5g071800 | 36.702 | 376 | 214 | 11 | 1 | 373 | 649 | 1003 | 3.79e-46 | 170 |
| MS.gene68310.t1 | MTR_6g046480 | 33.036 | 448 | 205 | 12 | 1 | 373 | 643 | 1070 | 5.60e-46 | 170 |
| MS.gene68310.t1 | MTR_5g070490 | 36.898 | 374 | 192 | 11 | 1 | 373 | 646 | 976 | 6.88e-46 | 169 |
| MS.gene68310.t1 | MTR_5g071470 | 37.135 | 377 | 187 | 11 | 1 | 373 | 649 | 979 | 7.53e-46 | 169 |
| MS.gene68310.t1 | MTR_6g046130 | 33.641 | 434 | 220 | 17 | 1 | 373 | 640 | 1066 | 1.14e-45 | 169 |
| MS.gene68310.t1 | MTR_5g072140 | 37.500 | 352 | 198 | 9 | 1 | 350 | 609 | 940 | 1.25e-44 | 166 |
| MS.gene68310.t1 | MTR_0256s0050 | 30.152 | 461 | 216 | 12 | 1 | 373 | 611 | 1053 | 1.67e-44 | 166 |
| MS.gene68310.t1 | MTR_0511s0020 | 30.867 | 473 | 230 | 12 | 1 | 393 | 628 | 1083 | 6.44e-44 | 164 |
| MS.gene68310.t1 | MTR_8g036195 | 32.189 | 466 | 203 | 14 | 1 | 373 | 626 | 1071 | 6.13e-43 | 161 |
| MS.gene68310.t1 | MTR_3g023320 | 30.538 | 465 | 213 | 13 | 1 | 373 | 644 | 1090 | 6.55e-43 | 160 |
| MS.gene68310.t1 | MTR_0144s0060 | 33.000 | 400 | 206 | 11 | 1 | 358 | 640 | 1019 | 9.57e-43 | 160 |
| MS.gene68310.t1 | MTR_6g046930 | 32.653 | 441 | 217 | 14 | 1 | 364 | 639 | 1076 | 1.21e-42 | 160 |
| MS.gene68310.t1 | MTR_6g047450 | 29.787 | 470 | 214 | 12 | 1 | 373 | 642 | 1092 | 3.82e-42 | 159 |
| MS.gene68310.t1 | MTR_6g052760 | 31.140 | 456 | 213 | 14 | 1 | 373 | 646 | 1083 | 1.56e-41 | 157 |
| MS.gene68310.t1 | MTR_4g126000 | 35.356 | 379 | 215 | 14 | 1 | 373 | 513 | 867 | 5.84e-41 | 155 |
| MS.gene68310.t1 | MTR_6g052455 | 30.998 | 471 | 226 | 14 | 1 | 390 | 536 | 988 | 1.16e-40 | 154 |
| MS.gene68310.t1 | MTR_0133s0030 | 31.034 | 464 | 210 | 14 | 1 | 373 | 641 | 1085 | 7.24e-40 | 152 |
| MS.gene68310.t1 | MTR_5g070470 | 35.620 | 379 | 194 | 12 | 1 | 373 | 650 | 984 | 3.41e-38 | 147 |
| MS.gene68310.t1 | MTR_0230s0010 | 32.783 | 424 | 212 | 16 | 1 | 355 | 587 | 1006 | 5.55e-38 | 146 |
| MS.gene68310.t1 | MTR_5g071570 | 36.934 | 287 | 159 | 9 | 1 | 284 | 650 | 917 | 1.54e-34 | 136 |
| MS.gene68310.t1 | MTR_0144s0010 | 31.081 | 444 | 170 | 14 | 17 | 373 | 2 | 396 | 3.96e-34 | 132 |
| MS.gene68310.t1 | MTR_6g046750 | 28.507 | 442 | 215 | 12 | 8 | 368 | 4 | 425 | 2.85e-33 | 130 |
| MS.gene68310.t1 | MTR_6g046450 | 30.170 | 411 | 232 | 13 | 1 | 373 | 691 | 1084 | 1.88e-32 | 130 |
| MS.gene68310.t1 | MTR_3g030960 | 32.584 | 356 | 209 | 15 | 1 | 343 | 669 | 1006 | 9.52e-32 | 128 |
| MS.gene68310.t1 | MTR_3g435740 | 30.214 | 374 | 216 | 16 | 1 | 353 | 713 | 1062 | 3.33e-31 | 126 |
| MS.gene68310.t1 | MTR_6g046570 | 29.204 | 452 | 211 | 12 | 1 | 373 | 648 | 1069 | 4.02e-31 | 126 |
| MS.gene68310.t1 | MTR_3g435720 | 30.749 | 374 | 214 | 16 | 1 | 353 | 669 | 1018 | 1.73e-30 | 124 |
| MS.gene68310.t1 | MTR_3g032110 | 31.313 | 396 | 219 | 15 | 1 | 359 | 717 | 1096 | 1.79e-30 | 124 |
| MS.gene68310.t1 | MTR_0002s0090 | 30.500 | 400 | 212 | 19 | 1 | 358 | 670 | 1045 | 2.06e-30 | 124 |
| MS.gene68310.t1 | MTR_3g035500 | 30.500 | 400 | 212 | 19 | 1 | 358 | 670 | 1045 | 2.06e-30 | 124 |
| MS.gene68310.t1 | MTR_5g028340 | 30.140 | 428 | 222 | 15 | 1 | 373 | 643 | 1048 | 3.40e-30 | 123 |
| MS.gene68310.t1 | MTR_3g032340 | 31.139 | 395 | 221 | 17 | 1 | 359 | 720 | 1099 | 7.18e-30 | 122 |
| MS.gene68310.t1 | MTR_5g028610 | 28.665 | 457 | 229 | 17 | 3 | 384 | 643 | 1077 | 9.70e-30 | 122 |
| MS.gene68310.t1 | MTR_6g046760 | 32.095 | 377 | 202 | 15 | 8 | 367 | 4 | 343 | 1.65e-29 | 119 |
| MS.gene68310.t1 | MTR_3g032800 | 30.227 | 397 | 228 | 18 | 1 | 362 | 669 | 1051 | 1.99e-29 | 121 |
| MS.gene68310.t1 | MTR_5g035450 | 46.591 | 176 | 62 | 3 | 225 | 368 | 94 | 269 | 2.55e-29 | 118 |
| MS.gene68310.t1 | MTR_3g032500 | 31.593 | 383 | 212 | 17 | 1 | 362 | 673 | 1026 | 9.27e-29 | 119 |
| MS.gene68310.t1 | MTR_6g046750 | 30.287 | 383 | 237 | 13 | 8 | 368 | 4 | 378 | 1.61e-28 | 116 |
| MS.gene68310.t1 | MTR_3g030980 | 33.241 | 361 | 201 | 17 | 1 | 343 | 669 | 1007 | 1.77e-28 | 118 |
| MS.gene68310.t1 | MTR_3g035480 | 31.392 | 395 | 218 | 21 | 1 | 359 | 670 | 1047 | 6.06e-28 | 117 |
| MS.gene68310.t1 | MTR_3g032370 | 30.326 | 399 | 219 | 19 | 1 | 359 | 667 | 1046 | 9.01e-28 | 116 |
| MS.gene68310.t1 | MTR_3g011620 | 32.984 | 382 | 215 | 15 | 1 | 359 | 674 | 1037 | 9.64e-28 | 116 |
| MS.gene68310.t1 | MTR_3g035940 | 30.633 | 395 | 221 | 18 | 1 | 359 | 670 | 1047 | 1.43e-27 | 115 |
| MS.gene68310.t1 | MTR_0002s0110 | 31.392 | 395 | 218 | 21 | 1 | 359 | 670 | 1047 | 1.47e-27 | 115 |
| MS.gene68310.t1 | MTR_3g034460 | 30.214 | 374 | 195 | 17 | 1 | 343 | 653 | 991 | 1.77e-27 | 115 |
| MS.gene68310.t1 | MTR_7g021000 | 29.348 | 460 | 233 | 15 | 1 | 374 | 666 | 1119 | 1.88e-27 | 115 |
| MS.gene68310.t1 | MTR_3g027250 | 30.941 | 404 | 214 | 15 | 1 | 357 | 656 | 1041 | 2.67e-27 | 115 |
| MS.gene68310.t1 | MTR_3g032960 | 29.949 | 394 | 227 | 17 | 1 | 359 | 669 | 1048 | 4.97e-27 | 114 |
| MS.gene68310.t1 | MTR_2g063777 | 28.900 | 391 | 226 | 18 | 1 | 355 | 666 | 1040 | 7.97e-27 | 113 |
| MS.gene68310.t1 | MTR_3g032760 | 30.100 | 402 | 214 | 20 | 1 | 359 | 669 | 1046 | 8.91e-27 | 113 |
| MS.gene68310.t1 | MTR_3g031940 | 31.092 | 357 | 215 | 16 | 1 | 343 | 672 | 1011 | 1.72e-26 | 112 |
| MS.gene68310.t1 | MTR_3g018930 | 31.099 | 373 | 208 | 16 | 1 | 359 | 672 | 1009 | 2.20e-26 | 112 |
| MS.gene68310.t1 | MTR_3g022570 | 31.135 | 379 | 204 | 16 | 1 | 344 | 693 | 1049 | 2.38e-26 | 112 |
| MS.gene68310.t1 | MTR_3g033240 | 31.831 | 355 | 187 | 17 | 1 | 338 | 672 | 988 | 3.70e-26 | 111 |
| MS.gene68310.t1 | MTR_6g016420 | 32.461 | 382 | 211 | 15 | 9 | 367 | 649 | 1006 | 5.59e-26 | 110 |
| MS.gene68310.t1 | MTR_3g020890 | 31.899 | 395 | 224 | 14 | 1 | 357 | 660 | 1047 | 6.35e-26 | 110 |
| MS.gene68310.t1 | MTR_0083s0120 | 29.427 | 384 | 198 | 13 | 1 | 362 | 218 | 550 | 7.92e-26 | 110 |
| MS.gene68310.t1 | MTR_3g034380 | 30.959 | 365 | 205 | 15 | 1 | 343 | 668 | 1007 | 8.08e-26 | 110 |
| MS.gene68310.t1 | MTR_3g022790 | 30.986 | 426 | 206 | 18 | 1 | 360 | 665 | 1068 | 1.13e-25 | 110 |
| MS.gene68310.t1 | MTR_0002s0120 | 31.088 | 386 | 213 | 21 | 1 | 350 | 453 | 821 | 1.16e-25 | 109 |
| MS.gene68310.t1 | MTR_3g033380 | 30.184 | 381 | 228 | 18 | 1 | 362 | 673 | 1034 | 1.39e-25 | 109 |
| MS.gene68310.t1 | MTR_3g032200 | 30.812 | 357 | 215 | 16 | 1 | 343 | 672 | 1010 | 2.22e-25 | 109 |
| MS.gene68310.t1 | MTR_6g016430 | 29.442 | 394 | 226 | 15 | 1 | 367 | 662 | 1030 | 2.54e-25 | 108 |
| MS.gene68310.t1 | MTR_3g036050 | 31.313 | 396 | 213 | 20 | 1 | 352 | 280 | 660 | 3.96e-25 | 108 |
| MS.gene68310.t1 | MTR_3g028040 | 30.055 | 366 | 207 | 14 | 1 | 343 | 669 | 1008 | 5.36e-25 | 108 |
| MS.gene68310.t1 | MTR_3g032150 | 30.541 | 370 | 204 | 19 | 1 | 359 | 667 | 994 | 6.85e-25 | 107 |
| MS.gene68310.t1 | MTR_4g050410 | 30.372 | 349 | 217 | 14 | 1 | 338 | 667 | 1000 | 8.37e-25 | 107 |
| MS.gene68310.t1 | MTR_3g022060 | 31.169 | 385 | 216 | 17 | 1 | 358 | 556 | 918 | 1.00e-24 | 107 |
| MS.gene68310.t1 | MTR_3g033110 | 30.791 | 354 | 212 | 16 | 1 | 338 | 645 | 981 | 1.33e-24 | 107 |
| MS.gene68310.t1 | MTR_5g028750 | 26.957 | 460 | 236 | 15 | 1 | 377 | 627 | 1069 | 1.40e-24 | 106 |
| MS.gene68310.t1 | MTR_2g078070 | 31.078 | 399 | 211 | 20 | 1 | 359 | 667 | 1041 | 2.78e-24 | 105 |
| MS.gene68310.t1 | MTR_5g072250 | 37.295 | 244 | 128 | 8 | 1 | 239 | 647 | 870 | 3.72e-24 | 105 |
| MS.gene68310.t1 | MTR_5g028070 | 27.594 | 453 | 229 | 16 | 1 | 368 | 784 | 1222 | 6.54e-24 | 104 |
| MS.gene68310.t1 | MTR_3g035960 | 30.189 | 371 | 194 | 17 | 1 | 338 | 668 | 1006 | 8.09e-24 | 104 |
| MS.gene68310.t1 | MTR_8g038590 | 31.897 | 348 | 203 | 15 | 4 | 341 | 684 | 1007 | 1.02e-23 | 104 |
| MS.gene68310.t1 | MTR_8g038590 | 30.996 | 271 | 147 | 10 | 115 | 373 | 988 | 1230 | 4.27e-13 | 71.6 |
| MS.gene68310.t1 | MTR_3g033860 | 29.462 | 353 | 226 | 13 | 1 | 343 | 669 | 1008 | 1.27e-23 | 103 |
| MS.gene68310.t1 | MTR_1643s0010 | 33.882 | 304 | 164 | 14 | 1 | 299 | 8 | 279 | 1.63e-23 | 100 |
| MS.gene68310.t1 | MTR_1g008240 | 28.571 | 378 | 222 | 15 | 1 | 358 | 654 | 1003 | 2.13e-23 | 103 |
| MS.gene68310.t1 | MTR_0137s0070 | 29.234 | 431 | 209 | 17 | 1 | 353 | 95 | 507 | 2.28e-23 | 102 |
| MS.gene68310.t1 | MTR_3g014080 | 29.234 | 431 | 209 | 17 | 1 | 353 | 677 | 1089 | 2.30e-23 | 103 |
| MS.gene68310.t1 | MTR_3g014080 | 29.234 | 431 | 209 | 17 | 1 | 353 | 677 | 1089 | 2.43e-23 | 103 |
| MS.gene68310.t1 | MTR_5g095910 | 30.456 | 417 | 216 | 17 | 1 | 359 | 669 | 1069 | 3.44e-23 | 102 |
| MS.gene68310.t1 | MTR_3g021340 | 30.203 | 394 | 217 | 17 | 1 | 377 | 657 | 1009 | 3.50e-23 | 102 |
| MS.gene68310.t1 | MTR_3g033080 | 32.234 | 273 | 155 | 11 | 1 | 262 | 672 | 925 | 3.76e-23 | 102 |
| MS.gene68310.t1 | MTR_0137s0070 | 29.234 | 431 | 209 | 17 | 1 | 353 | 95 | 507 | 3.78e-23 | 102 |
| MS.gene68310.t1 | MTR_3g023030 | 30.390 | 385 | 221 | 16 | 1 | 358 | 635 | 999 | 5.52e-23 | 102 |
| MS.gene68310.t1 | MTR_3g021330 | 29.381 | 388 | 209 | 14 | 1 | 373 | 250 | 587 | 6.11e-23 | 101 |
| MS.gene68310.t1 | MTR_3g034430 | 29.032 | 372 | 203 | 16 | 1 | 343 | 669 | 1008 | 6.36e-23 | 102 |
| MS.gene68310.t1 | MTR_3g023030 | 30.390 | 385 | 221 | 16 | 1 | 358 | 669 | 1033 | 7.08e-23 | 101 |
| MS.gene68310.t1 | MTR_3g025360 | 30.928 | 388 | 230 | 17 | 1 | 377 | 684 | 1044 | 7.29e-23 | 101 |
| MS.gene68310.t1 | MTR_2g014840 | 29.138 | 429 | 218 | 17 | 1 | 359 | 665 | 1077 | 9.91e-23 | 101 |
| MS.gene68310.t1 | MTR_3g022400 | 29.262 | 393 | 230 | 15 | 1 | 377 | 652 | 1012 | 9.97e-23 | 101 |
| MS.gene68310.t1 | MTR_3g024460 | 27.917 | 480 | 233 | 16 | 1 | 373 | 275 | 748 | 1.07e-22 | 100 |
| MS.gene68310.t1 | MTR_1g047800 | 27.681 | 401 | 238 | 14 | 1 | 364 | 661 | 1046 | 1.93e-22 | 100 |
| MS.gene68310.t1 | MTR_4g019360 | 30.184 | 381 | 227 | 12 | 1 | 359 | 592 | 955 | 2.30e-22 | 100 |
| MS.gene68310.t1 | MTR_3g020620 | 30.789 | 380 | 215 | 18 | 1 | 353 | 818 | 1176 | 3.33e-22 | 99.8 |
| MS.gene68310.t1 | MTR_3g015260 | 28.453 | 362 | 208 | 11 | 1 | 338 | 671 | 1005 | 4.96e-22 | 99.0 |
| MS.gene68310.t1 | MTR_5g028420 | 27.549 | 461 | 241 | 14 | 1 | 380 | 637 | 1085 | 5.55e-22 | 99.0 |
| MS.gene68310.t1 | MTR_8g446950 | 29.873 | 395 | 222 | 17 | 1 | 359 | 693 | 1068 | 5.98e-22 | 99.0 |
| MS.gene68310.t1 | MTR_5g028290 | 29.508 | 427 | 209 | 16 | 1 | 359 | 670 | 1072 | 6.86e-22 | 98.6 |
| MS.gene68310.t1 | MTR_8g037220 | 28.025 | 314 | 176 | 11 | 89 | 371 | 1657 | 1951 | 7.80e-22 | 98.6 |
| MS.gene68310.t1 | MTR_2g038760 | 32.198 | 323 | 182 | 14 | 1 | 310 | 687 | 985 | 8.07e-22 | 98.6 |
| MS.gene68310.t1 | MTR_2g038760 | 29.643 | 280 | 140 | 10 | 137 | 373 | 973 | 1238 | 1.55e-11 | 67.0 |
| MS.gene68310.t1 | MTR_3g022400 | 29.494 | 356 | 210 | 14 | 1 | 334 | 652 | 988 | 1.00e-21 | 98.2 |
| MS.gene68310.t1 | MTR_8g037220 | 28.025 | 314 | 176 | 11 | 89 | 371 | 1436 | 1730 | 1.04e-21 | 98.2 |
| MS.gene68310.t1 | MTR_3g021100 | 27.363 | 402 | 214 | 14 | 7 | 377 | 669 | 1023 | 1.27e-21 | 97.8 |
| MS.gene68310.t1 | MTR_3g022870 | 28.756 | 386 | 241 | 15 | 1 | 377 | 655 | 1015 | 1.95e-21 | 97.4 |
| MS.gene68310.t1 | MTR_3g022870 | 28.756 | 386 | 241 | 15 | 1 | 377 | 619 | 979 | 2.02e-21 | 97.4 |
| MS.gene68310.t1 | MTR_5g037590 | 30.233 | 387 | 218 | 17 | 1 | 359 | 630 | 992 | 2.09e-21 | 97.4 |
| MS.gene68310.t1 | MTR_3g018970 | 29.238 | 407 | 232 | 17 | 1 | 373 | 123 | 507 | 2.23e-21 | 96.3 |
| MS.gene68310.t1 | MTR_3g021170 | 28.421 | 380 | 211 | 16 | 1 | 344 | 658 | 1012 | 2.37e-21 | 97.1 |
| MS.gene68310.t1 | MTR_3g435220 | 29.974 | 387 | 231 | 13 | 1 | 359 | 628 | 1002 | 3.13e-21 | 96.7 |
| MS.gene68310.t1 | MTR_2g038930 | 31.902 | 326 | 180 | 15 | 1 | 308 | 513 | 814 | 3.31e-21 | 96.7 |
| MS.gene68310.t1 | MTR_2g038930 | 29.643 | 280 | 140 | 10 | 137 | 373 | 799 | 1064 | 4.94e-12 | 68.2 |
| MS.gene68310.t1 | MTR_2g039090 | 28.472 | 432 | 232 | 17 | 1 | 364 | 660 | 1082 | 5.12e-21 | 96.3 |
| MS.gene68310.t1 | MTR_3g022940 | 29.082 | 392 | 232 | 14 | 1 | 377 | 655 | 1015 | 9.47e-21 | 95.1 |
| MS.gene68310.t1 | MTR_1g045960 | 30.412 | 388 | 227 | 14 | 1 | 359 | 638 | 1011 | 1.15e-20 | 95.1 |
| MS.gene68310.t1 | MTR_3g019000 | 29.722 | 360 | 213 | 14 | 1 | 338 | 668 | 1009 | 1.21e-20 | 94.7 |
| MS.gene68310.t1 | MTR_8g011850 | 29.260 | 311 | 167 | 9 | 92 | 369 | 1713 | 2003 | 1.71e-20 | 94.7 |
| MS.gene68310.t1 | MTR_3g018980 | 29.041 | 365 | 217 | 12 | 1 | 334 | 670 | 1023 | 9.39e-20 | 92.0 |
| MS.gene68310.t1 | MTR_3g021380 | 29.474 | 380 | 209 | 18 | 1 | 344 | 645 | 1001 | 1.17e-19 | 92.0 |
| MS.gene68310.t1 | MTR_2g038900 | 31.595 | 326 | 181 | 15 | 1 | 308 | 676 | 977 | 1.19e-19 | 92.0 |
| MS.gene68310.t1 | MTR_2g038900 | 29.643 | 280 | 140 | 10 | 137 | 373 | 962 | 1227 | 5.50e-12 | 68.2 |
| MS.gene68310.t1 | MTR_3g022130 | 29.067 | 375 | 214 | 13 | 1 | 334 | 643 | 1006 | 1.21e-19 | 92.0 |
| MS.gene68310.t1 | MTR_3g070590 | 27.160 | 405 | 210 | 17 | 1 | 334 | 653 | 1043 | 1.31e-19 | 91.7 |
| MS.gene68310.t1 | MTR_3g021400 | 29.737 | 380 | 209 | 19 | 1 | 344 | 647 | 1004 | 1.63e-19 | 91.7 |
| MS.gene68310.t1 | MTR_3g019040 | 30.263 | 380 | 191 | 14 | 4 | 334 | 673 | 1027 | 2.15e-19 | 91.3 |
| MS.gene68310.t1 | MTR_8g030860 | 27.528 | 356 | 226 | 15 | 1 | 343 | 675 | 1011 | 2.23e-19 | 91.3 |
| MS.gene68310.t1 | MTR_3g022240 | 28.797 | 316 | 174 | 10 | 1 | 281 | 4 | 303 | 2.92e-19 | 89.0 |
| MS.gene68310.t1 | MTR_8g011600 | 30.645 | 310 | 167 | 10 | 98 | 373 | 489 | 784 | 2.92e-19 | 90.5 |
| MS.gene68310.t1 | MTR_0425s0020 | 28.418 | 373 | 194 | 14 | 1 | 359 | 679 | 992 | 3.98e-19 | 90.5 |
| MS.gene68310.t1 | MTR_0603s0010 | 30.000 | 380 | 229 | 16 | 1 | 359 | 730 | 1093 | 4.22e-19 | 90.1 |
| MS.gene68310.t1 | MTR_6g016420 | 29.189 | 370 | 201 | 13 | 9 | 367 | 649 | 968 | 5.57e-19 | 89.7 |
| MS.gene68310.t1 | MTR_3g071130 | 27.937 | 383 | 231 | 17 | 1 | 358 | 653 | 1015 | 6.25e-19 | 89.7 |
| MS.gene68310.t1 | MTR_3g071130 | 29.762 | 252 | 134 | 12 | 115 | 334 | 845 | 1085 | 1.75e-12 | 69.7 |
| MS.gene68310.t1 | MTR_3g022300 | 27.174 | 460 | 219 | 16 | 1 | 358 | 679 | 1124 | 6.38e-19 | 89.7 |
| MS.gene68310.t1 | MTR_7g021000 | 34.254 | 181 | 115 | 3 | 1 | 180 | 666 | 843 | 7.55e-19 | 89.4 |
| MS.gene68310.t1 | MTR_3g015260 | 29.600 | 375 | 216 | 14 | 1 | 357 | 671 | 1015 | 9.32e-19 | 89.4 |
| MS.gene68310.t1 | MTR_3g035810 | 31.111 | 270 | 146 | 10 | 1 | 257 | 639 | 881 | 1.13e-18 | 89.0 |
| MS.gene68310.t1 | MTR_5g039570 | 38.798 | 183 | 102 | 8 | 1 | 177 | 418 | 596 | 1.16e-18 | 88.6 |
| MS.gene68310.t1 | MTR_3g071070 | 26.425 | 386 | 233 | 13 | 1 | 358 | 448 | 810 | 1.55e-18 | 88.2 |
| MS.gene68310.t1 | MTR_3g071070 | 30.159 | 252 | 133 | 12 | 115 | 334 | 640 | 880 | 3.54e-13 | 72.0 |
| MS.gene68310.t1 | MTR_8g027540 | 28.435 | 313 | 183 | 9 | 90 | 374 | 658 | 957 | 2.80e-18 | 87.8 |
| MS.gene68310.t1 | MTR_3g007190 | 29.716 | 387 | 227 | 15 | 4 | 359 | 524 | 896 | 3.15e-18 | 87.4 |
| MS.gene68310.t1 | MTR_3g027420 | 31.111 | 360 | 205 | 16 | 1 | 338 | 659 | 997 | 3.62e-18 | 87.4 |
| MS.gene68310.t1 | MTR_7g078790 | 31.783 | 258 | 155 | 13 | 4 | 253 | 659 | 903 | 6.15e-18 | 86.7 |
| MS.gene68310.t1 | MTR_3g022600 | 30.411 | 365 | 199 | 16 | 1 | 359 | 686 | 1001 | 1.22e-17 | 85.9 |
| MS.gene68310.t1 | MTR_6g084550 | 33.333 | 225 | 133 | 9 | 1 | 221 | 654 | 865 | 2.88e-17 | 84.3 |
| MS.gene68310.t1 | MTR_3g022920 | 31.034 | 377 | 220 | 17 | 1 | 365 | 648 | 996 | 3.30e-17 | 84.3 |
| MS.gene68310.t1 | MTR_3g027470 | 26.904 | 394 | 238 | 15 | 1 | 359 | 574 | 952 | 3.39e-17 | 84.3 |
| MS.gene68310.t1 | MTR_3g027200 | 29.327 | 416 | 205 | 20 | 1 | 357 | 674 | 1059 | 4.20e-17 | 84.0 |
| MS.gene68310.t1 | MTR_5g040900 | 28.972 | 321 | 183 | 12 | 1 | 308 | 595 | 883 | 9.85e-17 | 82.8 |
| MS.gene68310.t1 | MTR_0005s0200 | 26.076 | 395 | 233 | 15 | 1 | 358 | 685 | 1057 | 2.11e-16 | 82.0 |
| MS.gene68310.t1 | MTR_3g018980 | 29.310 | 290 | 173 | 10 | 1 | 285 | 670 | 932 | 2.12e-16 | 82.0 |
| MS.gene68310.t1 | MTR_1g030770 | 27.673 | 318 | 189 | 8 | 106 | 396 | 623 | 926 | 2.18e-16 | 81.6 |
| MS.gene68310.t1 | MTR_7g013560 | 27.778 | 306 | 179 | 9 | 98 | 373 | 665 | 958 | 4.43e-16 | 80.9 |
| MS.gene68310.t1 | MTR_8g038570 | 32.883 | 222 | 129 | 8 | 1 | 219 | 686 | 890 | 5.64e-16 | 80.5 |
| MS.gene68310.t1 | MTR_3g436130 | 34.868 | 152 | 92 | 5 | 1 | 150 | 35 | 181 | 1.15e-15 | 75.5 |
| MS.gene68310.t1 | MTR_7g091550 | 31.741 | 293 | 162 | 14 | 108 | 392 | 605 | 867 | 1.84e-15 | 79.0 |
| MS.gene68310.t1 | MTR_3g014510 | 26.201 | 458 | 232 | 18 | 1 | 359 | 672 | 1122 | 2.03e-15 | 79.0 |
| MS.gene68310.t1 | MTR_7g091140 | 31.679 | 262 | 147 | 10 | 114 | 368 | 612 | 848 | 4.13e-15 | 78.2 |
| MS.gene68310.t1 | MTR_7g091140 | 31.557 | 244 | 137 | 9 | 114 | 351 | 1175 | 1394 | 1.48e-11 | 67.0 |
| MS.gene68310.t1 | MTR_1g037610 | 27.901 | 362 | 215 | 13 | 1 | 334 | 672 | 1015 | 6.10e-15 | 77.4 |
| MS.gene68310.t1 | MTR_3g022590 | 28.814 | 413 | 233 | 18 | 1 | 368 | 42 | 438 | 1.08e-14 | 75.9 |
| MS.gene68310.t1 | MTR_3g014040 | 29.589 | 365 | 228 | 14 | 1 | 359 | 662 | 1003 | 1.10e-14 | 76.6 |
| MS.gene68310.t1 | MTR_3g034650 | 28.056 | 360 | 193 | 16 | 23 | 362 | 214 | 527 | 1.43e-14 | 76.3 |
| MS.gene68310.t1 | MTR_8g011170 | 28.425 | 292 | 169 | 9 | 92 | 369 | 620 | 885 | 1.63e-14 | 75.9 |
| MS.gene68310.t1 | MTR_3g014360 | 26.804 | 388 | 215 | 15 | 1 | 331 | 656 | 1031 | 2.64e-14 | 75.5 |
| MS.gene68310.t1 | MTR_3g033130 | 24.806 | 387 | 206 | 19 | 1 | 359 | 644 | 973 | 5.30e-14 | 74.7 |
| MS.gene68310.t1 | MTR_0137s0010 | 29.315 | 365 | 229 | 14 | 1 | 359 | 216 | 557 | 9.55e-14 | 73.6 |
| MS.gene68310.t1 | MTR_3g014320 | 27.273 | 385 | 232 | 15 | 1 | 373 | 671 | 1019 | 1.54e-13 | 73.2 |
| MS.gene68310.t1 | MTR_5g076840 | 32.353 | 272 | 154 | 10 | 114 | 378 | 602 | 850 | 2.58e-13 | 72.4 |
| MS.gene68310.t1 | MTR_6g046900 | 33.610 | 241 | 125 | 7 | 137 | 368 | 148 | 362 | 3.51e-13 | 70.9 |
| MS.gene68310.t1 | MTR_3g022230 | 26.606 | 436 | 208 | 19 | 1 | 360 | 669 | 1068 | 4.96e-13 | 71.6 |
| MS.gene68310.t1 | MTR_3g022230 | 32.283 | 254 | 149 | 10 | 115 | 360 | 965 | 1203 | 1.31e-12 | 70.1 |
| MS.gene68310.t1 | MTR_3g022230 | 29.904 | 311 | 164 | 13 | 115 | 373 | 1280 | 1588 | 8.77e-12 | 67.8 |
| MS.gene68310.t1 | MTR_3g022230 | 30.903 | 288 | 143 | 14 | 115 | 355 | 1010 | 1288 | 3.15e-11 | 65.9 |
| MS.gene68310.t1 | MTR_3g022230 | 31.944 | 288 | 152 | 15 | 90 | 360 | 853 | 1113 | 3.53e-11 | 65.9 |
| MS.gene68310.t1 | MTR_8g011590 | 27.211 | 294 | 171 | 9 | 97 | 373 | 555 | 822 | 6.09e-13 | 70.9 |
| MS.gene68310.t1 | MTR_1g047910 | 31.466 | 232 | 127 | 9 | 145 | 368 | 642 | 849 | 6.66e-13 | 70.9 |
| MS.gene68310.t1 | MTR_8g011280 | 26.214 | 309 | 185 | 10 | 95 | 373 | 531 | 826 | 8.21e-13 | 70.5 |
| MS.gene68310.t1 | MTR_3g014390 | 27.378 | 347 | 205 | 14 | 1 | 334 | 669 | 981 | 9.15e-13 | 70.9 |
| MS.gene68310.t1 | MTR_2g014720 | 26.357 | 387 | 212 | 17 | 1 | 344 | 571 | 927 | 1.20e-12 | 70.1 |
| MS.gene68310.t1 | MTR_8g011180 | 27.303 | 304 | 161 | 9 | 105 | 373 | 647 | 925 | 1.37e-12 | 70.1 |
| MS.gene68310.t1 | MTR_7g491180 | 29.960 | 247 | 137 | 8 | 145 | 383 | 644 | 862 | 2.16e-12 | 69.3 |
| MS.gene68310.t1 | MTR_7g091190 | 29.960 | 247 | 137 | 8 | 145 | 383 | 644 | 862 | 2.16e-12 | 69.3 |
| MS.gene68310.t1 | MTR_6g046550 | 32.567 | 261 | 147 | 11 | 120 | 373 | 409 | 647 | 2.38e-12 | 68.9 |
| MS.gene68310.t1 | MTR_6g078930 | 33.594 | 256 | 156 | 9 | 110 | 358 | 728 | 976 | 6.00e-12 | 68.2 |
| MS.gene68310.t1 | MTR_8g011550 | 27.076 | 277 | 156 | 8 | 128 | 373 | 661 | 922 | 8.39e-12 | 67.4 |
| MS.gene68310.t1 | MTR_4g021690 | 27.027 | 370 | 221 | 17 | 1 | 347 | 666 | 1009 | 1.50e-11 | 66.6 |
| MS.gene68310.t1 | MTR_8g106550 | 27.095 | 358 | 203 | 17 | 1 | 348 | 605 | 914 | 1.96e-11 | 66.6 |
| MS.gene68310.t1 | MTR_8g010440 | 27.389 | 314 | 187 | 11 | 89 | 373 | 657 | 958 | 2.41e-11 | 66.2 |
| MS.gene68310.t1 | MTR_7g091110 | 28.346 | 254 | 134 | 9 | 145 | 384 | 623 | 842 | 2.57e-11 | 65.9 |
| MS.gene68310.t1 | MTR_3g015560 | 31.679 | 262 | 151 | 10 | 130 | 383 | 600 | 841 | 2.61e-11 | 65.9 |
| MS.gene68310.t1 | MTR_4g022480 | 24.138 | 377 | 250 | 13 | 1 | 361 | 664 | 1020 | 3.16e-11 | 65.9 |
| MS.gene68310.t1 | MTR_8g011320 | 26.578 | 301 | 182 | 8 | 100 | 373 | 601 | 889 | 4.32e-11 | 65.5 |
| MS.gene68310.t1 | MTR_0511s0010 | 32.386 | 176 | 93 | 5 | 222 | 373 | 52 | 225 | 4.79e-11 | 62.8 |
| MS.gene68310.t1 | MTR_3g015280 | 31.293 | 147 | 95 | 4 | 1 | 144 | 652 | 795 | 9.40e-11 | 64.3 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68310.t1 | AT3G14470 | 30.959 | 365 | 195 | 15 | 1 | 342 | 671 | 1001 | 9.35e-25 | 107 |
| MS.gene68310.t1 | AT3G14470 | 30.959 | 365 | 195 | 15 | 1 | 342 | 671 | 1001 | 9.35e-25 | 107 |
| MS.gene68310.t1 | AT3G14460 | 28.384 | 229 | 141 | 7 | 1 | 219 | 665 | 880 | 6.74e-13 | 71.2 |
| MS.gene68310.t1 | AT1G69550 | 33.463 | 257 | 154 | 13 | 111 | 355 | 930 | 1181 | 1.86e-12 | 69.7 |
| MS.gene68310.t1 | AT1G69550 | 34.351 | 262 | 151 | 13 | 111 | 358 | 954 | 1208 | 3.94e-12 | 68.9 |
| MS.gene68310.t1 | AT1G69550 | 29.073 | 313 | 185 | 11 | 76 | 355 | 682 | 990 | 8.24e-11 | 64.7 |
| MS.gene68310.t1 | AT5G17680 | 28.819 | 288 | 174 | 12 | 75 | 348 | 614 | 884 | 9.79e-12 | 67.4 |
| MS.gene68310.t1 | AT5G17680 | 28.819 | 288 | 174 | 12 | 75 | 348 | 613 | 883 | 1.02e-11 | 67.4 |
Find 88 sgRNAs with CRISPR-Local
Find 157 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCTTAAGGTATTGACAATTT+TGG | 0.091997 | 5.2:+25916283 | MS.gene68310:CDS |
| CTTCAATATTGCGAAGTTTA+AGG | 0.112375 | 5.2:-25916631 | None:intergenic |
| AGAATTAGAAATTGATGATT+TGG | 0.244080 | 5.2:+25916313 | MS.gene68310:CDS |
| CTCTTTAGAAATACAAGGTT+TGG | 0.257039 | 5.2:+25916718 | MS.gene68310:CDS |
| GAATTAGAAATTGATGATTT+GGG | 0.269971 | 5.2:+25916314 | MS.gene68310:CDS |
| TCTTTAAGTTGTTGGGTATA+AGG | 0.275600 | 5.2:-25916125 | None:intergenic |
| AGTTGGAGAAACGGTGTAAA+AGG | 0.279977 | 5.2:+25916942 | MS.gene68310:CDS |
| CAAGGCAAGCCCAACAAATT+AGG | 0.285072 | 5.2:-25916521 | None:intergenic |
| CTTGAGAGATTGACGATTCA+AGG | 0.292446 | 5.2:+25916350 | MS.gene68310:CDS |
| TTCAATATTGCGAAGTTTAA+GGG | 0.300871 | 5.2:-25916630 | None:intergenic |
| TTCTCTAGGAGTTCTAAAAT+TGG | 0.302456 | 5.2:+25916412 | MS.gene68310:CDS |
| AGACATCCATTCTGGGAAAT+AGG | 0.309578 | 5.2:-25916174 | None:intergenic |
| ACATCCTTACCAGACTCTTT+AGG | 0.323527 | 5.2:+25916803 | MS.gene68310:CDS |
| CCTCGCACGGATTGAATTTG+TGG | 0.326153 | 5.2:-25918061 | None:intergenic |
| GAAGGACTAGACATCCATTC+TGG | 0.337400 | 5.2:-25916182 | None:intergenic |
| CCTTCCATCTCTCAAAGATA+TGG | 0.340467 | 5.2:+25916544 | MS.gene68310:CDS |
| ATCCAACTCTTTAAGTTGTT+GGG | 0.373536 | 5.2:-25916132 | None:intergenic |
| AAACGGTGTAAAAGGGAAAA+AGG | 0.374593 | 5.2:+25916950 | MS.gene68310:CDS |
| CATCCAACTCTTTAAGTTGT+TGG | 0.378443 | 5.2:-25916133 | None:intergenic |
| GGAGAAACTACCTTCTCTTA+AGG | 0.380387 | 5.2:+25916268 | MS.gene68310:CDS |
| TGACCTTGAATCATTATCAT+TGG | 0.383665 | 5.2:+25916763 | MS.gene68310:CDS |
| AAGAAGTTGTCCTAATTTGT+TGG | 0.385494 | 5.2:+25916511 | MS.gene68310:CDS |
| CAAGGGAAGAGGGTTCCTTT+TGG | 0.387837 | 5.2:+25915911 | MS.gene68310:CDS |
| CTTGATAACCTTGACAGGTT+TGG | 0.395213 | 5.2:-25916443 | None:intergenic |
| AGAAGTTGTCCTAATTTGTT+GGG | 0.405604 | 5.2:+25916512 | MS.gene68310:CDS |
| CAAACCTTGTATTTCTAAAG+AGG | 0.416047 | 5.2:-25916717 | None:intergenic |
| AAAATTAGAAATTATTGAGT+TGG | 0.417729 | 5.2:+25916379 | MS.gene68310:CDS |
| TCAACTTCTTAAGAGAAGTA+AGG | 0.424114 | 5.2:-25916688 | None:intergenic |
| AAATTAGAAATTATTGAGTT+GGG | 0.425018 | 5.2:+25916380 | MS.gene68310:CDS |
| CTAAGGTTTCCTAAAGAGTC+TGG | 0.425229 | 5.2:-25916812 | None:intergenic |
| CTGTTTACACATCCCACAAT+TGG | 0.428457 | 5.2:+25916247 | MS.gene68310:CDS |
| TCTTTAGAAATACAAGGTTT+GGG | 0.430346 | 5.2:+25916719 | MS.gene68310:CDS |
| CTAAGTTCAATTCATAAACT+TGG | 0.442260 | 5.2:+25916596 | MS.gene68310:CDS |
| CAGGTTCCTATTTCCCAGAA+TGG | 0.445442 | 5.2:+25916168 | MS.gene68310:CDS |
| CCTCCCTTGATAACCTTGAC+AGG | 0.454248 | 5.2:-25916448 | None:intergenic |
| CAAACCTGTCAAGGTTATCA+AGG | 0.465183 | 5.2:+25916444 | MS.gene68310:CDS |
| AGGTTTCTTAGCATCCCATC+TGG | 0.467198 | 5.2:-25916668 | None:intergenic |
| AAGAGTCTGGTAAGGATGTC+AGG | 0.467233 | 5.2:-25916799 | None:intergenic |
| ATTGTCCTAATTCTGCCAAA+AGG | 0.478119 | 5.2:-25915926 | None:intergenic |
| GAAGGTAGTTTCTCCAATTG+TGG | 0.481141 | 5.2:-25916260 | None:intergenic |
| TCGGACAGTTATAAATGTAT+AGG | 0.483860 | 5.2:-25916847 | None:intergenic |
| TAGCGTCTGTAAATGTATTA+CGG | 0.484609 | 5.2:-25916204 | None:intergenic |
| TACCCAACAACTTAAAGAGT+TGG | 0.501394 | 5.2:+25916130 | MS.gene68310:CDS |
| GTAAGCACGTGAAGAATTTG+TGG | 0.504242 | 5.2:+25916033 | MS.gene68310:CDS |
| TTTCAAGTCTTGATAAGAGC+GGG | 0.505625 | 5.2:-25916487 | None:intergenic |
| AAGGACTAGACATCCATTCT+GGG | 0.511933 | 5.2:-25916181 | None:intergenic |
| TTGGATGTGAAAGTATATAC+AGG | 0.512453 | 5.2:+25916149 | MS.gene68310:CDS |
| TATGTCGTTGGCAAGGGAAG+AGG | 0.514103 | 5.2:+25915900 | MS.gene68310:CDS |
| ATAGGTCTTGAAGTGAACTA+AGG | 0.517447 | 5.2:-25916829 | None:intergenic |
| AATTAAATTTGAAAGTAGAT+CGG | 0.522296 | 5.2:+25915946 | MS.gene68310:CDS |
| GCTCCAATGATAATGATTCA+AGG | 0.525385 | 5.2:-25916766 | None:intergenic |
| GTTGGAGAAACGGTGTAAAA+GGG | 0.526473 | 5.2:+25916943 | MS.gene68310:CDS |
| AAGGTAGTTTCTCCAATTGT+GGG | 0.528760 | 5.2:-25916259 | None:intergenic |
| ATTTCCTCTTTAGAAATACA+AGG | 0.532012 | 5.2:+25916713 | MS.gene68310:CDS |
| AGCATGTATGTCGTTGGCAA+GGG | 0.538926 | 5.2:+25915894 | MS.gene68310:CDS |
| ACAAATTCTTCAGAGCAGAA+AGG | 0.541084 | 5.2:-25916901 | None:intergenic |
| ATTAATTCCGTCTTTGACAA+GGG | 0.545842 | 5.2:+25918129 | MS.gene68310:CDS |
| AATTAATTCCGTCTTTGACA+AGG | 0.546825 | 5.2:+25918128 | MS.gene68310:CDS |
| TCTGGTAAGGATGTCAGGTT+CGG | 0.546885 | 5.2:-25916794 | None:intergenic |
| GAGCATGTATGTCGTTGGCA+AGG | 0.550016 | 5.2:+25915893 | MS.gene68310:CDS |
| GAAAGGCTTTGAATGCTCGC+TGG | 0.550380 | 5.2:-25916884 | None:intergenic |
| TTGGGAAAACTACCTTCTCT+AGG | 0.551123 | 5.2:+25916398 | MS.gene68310:CDS |
| CACGTGCTTACTCAACATGT+TGG | 0.554810 | 5.2:-25916021 | None:intergenic |
| AGAAATACAAGGTTTGGGTG+AGG | 0.556415 | 5.2:+25916724 | MS.gene68310:CDS |
| TTTCTGACCCTTGTCAAAGA+CGG | 0.562027 | 5.2:-25918136 | None:intergenic |
| ATATCCATATCTTTGAGAGA+TGG | 0.563396 | 5.2:-25916548 | None:intergenic |
| GTCCCAATTGCAAGAAAATG+TGG | 0.567161 | 5.2:+25916079 | MS.gene68310:CDS |
| AATTAGAAATTGATGATTTG+GGG | 0.568281 | 5.2:+25916315 | MS.gene68310:CDS |
| ATTGTCTTGAGTTGGAGAAA+CGG | 0.578531 | 5.2:+25916933 | MS.gene68310:CDS |
| ACTTTGAGCATGTATGTCGT+TGG | 0.578720 | 5.2:+25915888 | MS.gene68310:CDS |
| GTTTCCTAAAGAGTCTGGTA+AGG | 0.579491 | 5.2:-25916807 | None:intergenic |
| ATTGTCAATACCTTAAGAGA+AGG | 0.582121 | 5.2:-25916278 | None:intergenic |
| ATGTCGTTGGCAAGGGAAGA+GGG | 0.591075 | 5.2:+25915901 | MS.gene68310:CDS |
| TGAAGAATTTGTGGTTGTCG+TGG | 0.600491 | 5.2:+25916042 | MS.gene68310:CDS |
| AAACCTGTCAAGGTTATCAA+GGG | 0.602018 | 5.2:+25916445 | MS.gene68310:CDS |
| ATCGTCAATCTCTCAAGAGA+AGG | 0.603660 | 5.2:-25916344 | None:intergenic |
| GTAATACATTTACAGACGCT+AGG | 0.604942 | 5.2:+25916206 | MS.gene68310:CDS |
| ACGAACTACCAAACCTGTCA+AGG | 0.606036 | 5.2:+25916435 | MS.gene68310:CDS |
| GTCTGTAAATGTATTACGGA+AGG | 0.608306 | 5.2:-25916200 | None:intergenic |
| GAAGAATTTGTGGTTGTCGT+GGG | 0.610363 | 5.2:+25916043 | MS.gene68310:CDS |
| TCAAGGTTATCAAGGGAGGA+TGG | 0.610890 | 5.2:+25916452 | MS.gene68310:CDS |
| GCTGGAAGACAATTCAACTT+CGG | 0.611648 | 5.2:-25916866 | None:intergenic |
| TCTTTGAGAGATGGAAGGCA+AGG | 0.620638 | 5.2:-25916539 | None:intergenic |
| CCATATCTTTGAGAGATGGA+AGG | 0.624264 | 5.2:-25916544 | None:intergenic |
| ATTTCAAGTCTTGATAAGAG+CGG | 0.640187 | 5.2:-25916488 | None:intergenic |
| CCACAAATTCAATCCGTGCG+AGG | 0.642183 | 5.2:+25918061 | MS.gene68310:CDS |
| CCTGTCAAGGTTATCAAGGG+AGG | 0.654883 | 5.2:+25916448 | MS.gene68310:CDS |
| TAGGGAAGATGACTTCACTG+AGG | 0.777761 | 5.2:+25915865 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | ACTATTTGTTTTAAAAAATT+CGG | + | chr5.2:25917333-25917352 | MS.gene68310:intron | 10.0% |
| !!! | TTTTGACAATTTTATATTTA+TGG | + | chr5.2:25917048-25917067 | MS.gene68310:intron | 10.0% |
| !! | AAAATTAGAAATTATTGAGT+TGG | + | chr5.2:25916379-25916398 | MS.gene68310:CDS | 15.0% |
| !! | AAATTAGAAATTATTGAGTT+GGG | + | chr5.2:25916380-25916399 | MS.gene68310:CDS | 15.0% |
| !! | AATTAAATTTGAAAGTAGAT+CGG | + | chr5.2:25915946-25915965 | MS.gene68310:CDS | 15.0% |
| !! | GAAAAAATCATTAGAAATCT+TGG | + | chr5.2:25918083-25918102 | MS.gene68310:CDS | 20.0% |
| !! | TGTCAAAATGTATTAAGAAA+AGG | - | chr5.2:25917036-25917055 | None:intergenic | 20.0% |
| !!! | AAGAAAAAAAAGTATAACAC+AGG | - | chr5.2:25917172-25917191 | None:intergenic | 20.0% |
| !!! | AATTAGAAATTGATGATTTG+GGG | + | chr5.2:25916315-25916334 | MS.gene68310:CDS | 20.0% |
| !!! | AGAATTAGAAATTGATGATT+TGG | + | chr5.2:25916313-25916332 | MS.gene68310:CDS | 20.0% |
| !!! | ATAGTGTTTTATTGAACATT+TGG | + | chr5.2:25917105-25917124 | MS.gene68310:intron | 20.0% |
| !!! | ATTCGGTATTTTAAATTCTT+TGG | + | chr5.2:25917350-25917369 | MS.gene68310:intron | 20.0% |
| !!! | GAATTAGAAATTGATGATTT+GGG | + | chr5.2:25916314-25916333 | MS.gene68310:CDS | 20.0% |
| !!! | TATACTTTTTTTTCTTTCAC+AGG | + | chr5.2:25917176-25917195 | MS.gene68310:intron | 20.0% |
| !!! | TCTCATTTATGATGTTTTAA+TGG | + | chr5.2:25917790-25917809 | MS.gene68310:intron | 20.0% |
| !!! | TTAATGTATAGTTTGTTGAA+GGG | + | chr5.2:25917602-25917621 | MS.gene68310:intron | 20.0% |
| !!! | TTTAATGTATAGTTTGTTGA+AGG | + | chr5.2:25917601-25917620 | MS.gene68310:intron | 20.0% |
| ! | AACACAGGAATTAAACTTAA+TGG | - | chr5.2:25917157-25917176 | None:intergenic | 25.0% |
| ! | AATTGATGAAGATACAAAGA+AGG | - | chr5.2:25918014-25918033 | None:intergenic | 25.0% |
| ! | ACACAGGAATTAAACTTAAT+GGG | - | chr5.2:25917156-25917175 | None:intergenic | 25.0% |
| ! | ATAACTTGAGCTCAATTATT+TGG | - | chr5.2:25917433-25917452 | None:intergenic | 25.0% |
| ! | ATTTGAAGAGATGAAGATTT+GGG | + | chr5.2:25917217-25917236 | MS.gene68310:intron | 25.0% |
| ! | CTAAGTTCAATTCATAAACT+TGG | + | chr5.2:25916596-25916615 | MS.gene68310:CDS | 25.0% |
| ! | CTGAATACTACAAACAAATT+GGG | + | chr5.2:25917373-25917392 | MS.gene68310:intron | 25.0% |
| ! | GTTTATTTGTTCAGATCTAA+AGG | + | chr5.2:25917262-25917281 | MS.gene68310:intron | 25.0% |
| ! | GTTTGAATGTGAGATATATT+TGG | - | chr5.2:25916986-25917005 | None:intergenic | 25.0% |
| ! | TATTTGAAGAGATGAAGATT+TGG | + | chr5.2:25917216-25917235 | MS.gene68310:intron | 25.0% |
| ! | TCAATAAAACACTATGATAG+AGG | - | chr5.2:25917100-25917119 | None:intergenic | 25.0% |
| ! | TGAATACTACAAACAAATTG+GGG | + | chr5.2:25917374-25917393 | MS.gene68310:intron | 25.0% |
| ! | TTATTTGGTTGAAGAAAACT+AGG | - | chr5.2:25917418-25917437 | None:intergenic | 25.0% |
| ! | TTCAATATTGCGAAGTTTAA+GGG | - | chr5.2:25916633-25916652 | None:intergenic | 25.0% |
| !! | ATTTCCTCTTTAGAAATACA+AGG | + | chr5.2:25916713-25916732 | MS.gene68310:CDS | 25.0% |
| !! | TCTTTAGAAATACAAGGTTT+GGG | + | chr5.2:25916719-25916738 | MS.gene68310:CDS | 25.0% |
| !!! | AAACTCTTAAAGGTATGTTT+TGG | + | chr5.2:25917002-25917021 | MS.gene68310:intron | 25.0% |
| !!! | CTTAAGGTATTGACAATTTT+GGG | + | chr5.2:25916284-25916303 | MS.gene68310:CDS | 25.0% |
| !!! | TATTTTTGATTGTCTTGAGT+TGG | + | chr5.2:25916925-25916944 | MS.gene68310:CDS | 25.0% |
| !!! | TCAAGTGTTTTATTGATTCT+GGG | + | chr5.2:25917128-25917147 | MS.gene68310:intron | 25.0% |
| !!! | TCTTAAGGTATTGACAATTT+TGG | + | chr5.2:25916283-25916302 | MS.gene68310:CDS | 25.0% |
| !!! | TTGCACTGATTTGTAAAAAA+TGG | + | chr5.2:25917828-25917847 | MS.gene68310:intron | 25.0% |
| AATTAATTCCGTCTTTGACA+AGG | + | chr5.2:25918128-25918147 | MS.gene68310:CDS | 30.0% | |
| ACATCATAAATGAGAATGTC+CGG | - | chr5.2:25917785-25917804 | None:intergenic | 30.0% | |
| ATTAATTCCGTCTTTGACAA+GGG | + | chr5.2:25918129-25918148 | MS.gene68310:CDS | 30.0% | |
| ATTGTCAATACCTTAAGAGA+AGG | - | chr5.2:25916281-25916300 | None:intergenic | 30.0% | |
| ATTTGTTCAGATCTAAAGGA+AGG | + | chr5.2:25917266-25917285 | MS.gene68310:intron | 30.0% | |
| CATTAAACTGCATGTCAAAA+AGG | - | chr5.2:25917588-25917607 | None:intergenic | 30.0% | |
| CTTCAATATTGCGAAGTTTA+AGG | - | chr5.2:25916634-25916653 | None:intergenic | 30.0% | |
| GCTGAATACTACAAACAAAT+TGG | + | chr5.2:25917372-25917391 | MS.gene68310:intron | 30.0% | |
| TAGCGTCTGTAAATGTATTA+CGG | - | chr5.2:25916207-25916226 | None:intergenic | 30.0% | |
| TCAACTTCTTAAGAGAAGTA+AGG | - | chr5.2:25916691-25916710 | None:intergenic | 30.0% | |
| TCGGACAGTTATAAATGTAT+AGG | - | chr5.2:25916850-25916869 | None:intergenic | 30.0% | |
| TCTCACATTCAAACTCTTAA+AGG | + | chr5.2:25916992-25917011 | MS.gene68310:intron | 30.0% | |
| TGACCTTGAATCATTATCAT+TGG | + | chr5.2:25916763-25916782 | MS.gene68310:CDS | 30.0% | |
| TTCCATCATCAAAACTCTAA+TGG | + | chr5.2:25917722-25917741 | MS.gene68310:intron | 30.0% | |
| TTGTACTCACATTGTTATGT+TGG | - | chr5.2:25917695-25917714 | None:intergenic | 30.0% | |
| ! | AAGAAGTTGTCCTAATTTGT+TGG | + | chr5.2:25916511-25916530 | MS.gene68310:CDS | 30.0% |
| ! | AGAACTCGAATTTGCTTTAT+GGG | + | chr5.2:25917486-25917505 | MS.gene68310:intron | 30.0% |
| ! | AGTTAACATGTTTTCCAGAT+GGG | + | chr5.2:25916654-25916673 | MS.gene68310:CDS | 30.0% |
| ! | ATATCCATATCTTTGAGAGA+TGG | - | chr5.2:25916551-25916570 | None:intergenic | 30.0% |
| ! | ATTTCAAGTCTTGATAAGAG+CGG | - | chr5.2:25916491-25916510 | None:intergenic | 30.0% |
| ! | CAAACCTTGTATTTCTAAAG+AGG | - | chr5.2:25916720-25916739 | None:intergenic | 30.0% |
| ! | CAATTTGAAGTCAATAAAGC+TGG | - | chr5.2:25917564-25917583 | None:intergenic | 30.0% |
| ! | CTCTTTAGAAATACAAGGTT+TGG | + | chr5.2:25916718-25916737 | MS.gene68310:CDS | 30.0% |
| ! | TTGGATGTGAAAGTATATAC+AGG | + | chr5.2:25916149-25916168 | MS.gene68310:CDS | 30.0% |
| !! | AACCATTAGAGTTTTGATGA+TGG | - | chr5.2:25917727-25917746 | None:intergenic | 30.0% |
| !! | AGAAGTTGTCCTAATTTGTT+GGG | + | chr5.2:25916512-25916531 | MS.gene68310:CDS | 30.0% |
| !! | ATCCAACTCTTTAAGTTGTT+GGG | - | chr5.2:25916135-25916154 | None:intergenic | 30.0% |
| !! | ATTGTTATGTTGGTGTCAAA+GGG | - | chr5.2:25917685-25917704 | None:intergenic | 30.0% |
| !! | TCTTTAAGTTGTTGGGTATA+AGG | - | chr5.2:25916128-25916147 | None:intergenic | 30.0% |
| !! | TTCTCTAGGAGTTCTAAAAT+TGG | + | chr5.2:25916412-25916431 | MS.gene68310:CDS | 30.0% |
| !!! | AATTTTAGAACTCCTAGAGA+AGG | - | chr5.2:25916413-25916432 | None:intergenic | 30.0% |
| !!! | CTTTATATTTTTCAAGCCTC+CGG | + | chr5.2:25917763-25917782 | MS.gene68310:intron | 30.0% |
| !!! | GTCAAGTGTTTTATTGATTC+TGG | + | chr5.2:25917127-25917146 | MS.gene68310:intron | 30.0% |
| AAACCTGTCAAGGTTATCAA+GGG | + | chr5.2:25916445-25916464 | MS.gene68310:CDS | 35.0% | |
| AAACGGTGTAAAAGGGAAAA+AGG | + | chr5.2:25916950-25916969 | MS.gene68310:CDS | 35.0% | |
| AAGGTAGTTTCTCCAATTGT+GGG | - | chr5.2:25916262-25916281 | None:intergenic | 35.0% | |
| ACAAATTCTTCAGAGCAGAA+AGG | - | chr5.2:25916904-25916923 | None:intergenic | 35.0% | |
| ATAGGTCTTGAAGTGAACTA+AGG | - | chr5.2:25916832-25916851 | None:intergenic | 35.0% | |
| ATTGTCCTAATTCTGCCAAA+AGG | - | chr5.2:25915929-25915948 | None:intergenic | 35.0% | |
| CAAATAAACTACATACGCAG+TGG | - | chr5.2:25917251-25917270 | None:intergenic | 35.0% | |
| CACTATGATAGAGGAAGAAA+AGG | - | chr5.2:25917091-25917110 | None:intergenic | 35.0% | |
| GTAATACATTTACAGACGCT+AGG | + | chr5.2:25916206-25916225 | MS.gene68310:CDS | 35.0% | |
| GTCTGTAAATGTATTACGGA+AGG | - | chr5.2:25916203-25916222 | None:intergenic | 35.0% | |
| TACCCAACAACTTAAAGAGT+TGG | + | chr5.2:25916130-25916149 | MS.gene68310:CDS | 35.0% | |
| ! | AACAAATTGGGGTATTTGCT+CGG | + | chr5.2:25917385-25917404 | MS.gene68310:intron | 35.0% |
| ! | AACAGCTTTTGCAATTTACG+AGG | - | chr5.2:25916232-25916251 | None:intergenic | 35.0% |
| ! | CTCCACATTTTCTTGCAATT+GGG | - | chr5.2:25916084-25916103 | None:intergenic | 35.0% |
| ! | GAGAACTCGAATTTGCTTTA+TGG | + | chr5.2:25917485-25917504 | MS.gene68310:intron | 35.0% |
| ! | GAGTTAACATGTTTTCCAGA+TGG | + | chr5.2:25916653-25916672 | MS.gene68310:CDS | 35.0% |
| ! | GCTCCAATGATAATGATTCA+AGG | - | chr5.2:25916769-25916788 | None:intergenic | 35.0% |
| ! | TTTCAAGTCTTGATAAGAGC+GGG | - | chr5.2:25916490-25916509 | None:intergenic | 35.0% |
| !! | ATTGTCTTGAGTTGGAGAAA+CGG | + | chr5.2:25916933-25916952 | MS.gene68310:CDS | 35.0% |
| !! | CATCCAACTCTTTAAGTTGT+TGG | - | chr5.2:25916136-25916155 | None:intergenic | 35.0% |
| !! | CATTGTTATGTTGGTGTCAA+AGG | - | chr5.2:25917686-25917705 | None:intergenic | 35.0% |
| !! | TGCTGATAATCTTGATTTGC+AGG | + | chr5.2:25918033-25918052 | MS.gene68310:intron | 35.0% |
| !!! | CTAATGATTTTTTCCTCGCA+CGG | - | chr5.2:25918077-25918096 | None:intergenic | 35.0% |
| AAAGGGAAAAAGGTGAGGAT+TGG | + | chr5.2:25916960-25916979 | MS.gene68310:intron | 40.0% | |
| AAGGACTAGACATCCATTCT+GGG | - | chr5.2:25916184-25916203 | None:intergenic | 40.0% | |
| ACATCCTTACCAGACTCTTT+AGG | + | chr5.2:25916803-25916822 | MS.gene68310:CDS | 40.0% | |
| ACTTTGAGCATGTATGTCGT+TGG | + | chr5.2:25915888-25915907 | MS.gene68310:CDS | 40.0% | |
| AGAAATACAAGGTTTGGGTG+AGG | + | chr5.2:25916724-25916743 | MS.gene68310:CDS | 40.0% | |
| AGTTGGAGAAACGGTGTAAA+AGG | + | chr5.2:25916942-25916961 | MS.gene68310:CDS | 40.0% | |
| ATCGTCAATCTCTCAAGAGA+AGG | - | chr5.2:25916347-25916366 | None:intergenic | 40.0% | |
| CAAACCTGTCAAGGTTATCA+AGG | + | chr5.2:25916444-25916463 | MS.gene68310:CDS | 40.0% | |
| CCTTCCATCTCTCAAAGATA+TGG | + | chr5.2:25916544-25916563 | MS.gene68310:CDS | 40.0% | |
| CTAAGGTTTCCTAAAGAGTC+TGG | - | chr5.2:25916815-25916834 | None:intergenic | 40.0% | |
| CTGTTTACACATCCCACAAT+TGG | + | chr5.2:25916247-25916266 | MS.gene68310:CDS | 40.0% | |
| CTTGAGAGATTGACGATTCA+AGG | + | chr5.2:25916350-25916369 | MS.gene68310:CDS | 40.0% | |
| GAAGAATTTGTGGTTGTCGT+GGG | + | chr5.2:25916043-25916062 | MS.gene68310:CDS | 40.0% | |
| GAAGGTAGTTTCTCCAATTG+TGG | - | chr5.2:25916263-25916282 | None:intergenic | 40.0% | |
| GCTGGAAGACAATTCAACTT+CGG | - | chr5.2:25916869-25916888 | None:intergenic | 40.0% | |
| GGAGAAACTACCTTCTCTTA+AGG | + | chr5.2:25916268-25916287 | MS.gene68310:CDS | 40.0% | |
| GTAAGCACGTGAAGAATTTG+TGG | + | chr5.2:25916033-25916052 | MS.gene68310:CDS | 40.0% | |
| GTCCCAATTGCAAGAAAATG+TGG | + | chr5.2:25916079-25916098 | MS.gene68310:CDS | 40.0% | |
| GTGTAAAAGGGAAAAAGGTG+AGG | + | chr5.2:25916955-25916974 | MS.gene68310:intron | 40.0% | |
| GTTGGAGAAACGGTGTAAAA+GGG | + | chr5.2:25916943-25916962 | MS.gene68310:CDS | 40.0% | |
| GTTTCCTAAAGAGTCTGGTA+AGG | - | chr5.2:25916810-25916829 | None:intergenic | 40.0% | |
| TCATAAATGAGAATGTCCGG+AGG | - | chr5.2:25917782-25917801 | None:intergenic | 40.0% | |
| TGAAGAATTTGTGGTTGTCG+TGG | + | chr5.2:25916042-25916061 | MS.gene68310:CDS | 40.0% | |
| TTGGGAAAACTACCTTCTCT+AGG | + | chr5.2:25916398-25916417 | MS.gene68310:CDS | 40.0% | |
| TTTCTGACCCTTGTCAAAGA+CGG | - | chr5.2:25918139-25918158 | None:intergenic | 40.0% | |
| ! | AGACATCCATTCTGGGAAAT+AGG | - | chr5.2:25916177-25916196 | None:intergenic | 40.0% |
| ! | CCATATCTTTGAGAGATGGA+AGG | - | chr5.2:25916547-25916566 | None:intergenic | 40.0% |
| ! | CTACACTTTTCACTCTCTCA+AGG | - | chr5.2:25915986-25916005 | None:intergenic | 40.0% |
| ! | CTTGATAACCTTGACAGGTT+TGG | - | chr5.2:25916446-25916465 | None:intergenic | 40.0% |
| ! | GCTCCACATTTTCTTGCAAT+TGG | - | chr5.2:25916085-25916104 | None:intergenic | 40.0% |
| AAGAGTCTGGTAAGGATGTC+AGG | - | chr5.2:25916802-25916821 | None:intergenic | 45.0% | |
| ACGAACTACCAAACCTGTCA+AGG | + | chr5.2:25916435-25916454 | MS.gene68310:CDS | 45.0% | |
| AGCATGTATGTCGTTGGCAA+GGG | + | chr5.2:25915894-25915913 | MS.gene68310:CDS | 45.0% | |
| AGGTTTCTTAGCATCCCATC+TGG | - | chr5.2:25916671-25916690 | None:intergenic | 45.0% | |
| CAAGGCAAGCCCAACAAATT+AGG | - | chr5.2:25916524-25916543 | None:intergenic | 45.0% | |
| CACGTGCTTACTCAACATGT+TGG | - | chr5.2:25916024-25916043 | None:intergenic | 45.0% | |
| CAGGTTCCTATTTCCCAGAA+TGG | + | chr5.2:25916168-25916187 | MS.gene68310:CDS | 45.0% | |
| GAAGGACTAGACATCCATTC+TGG | - | chr5.2:25916185-25916204 | None:intergenic | 45.0% | |
| GGCGACACGTTATTCGTTAT+TGG | - | chr5.2:25917634-25917653 | None:intergenic | 45.0% | |
| TCAAGGTTATCAAGGGAGGA+TGG | + | chr5.2:25916452-25916471 | MS.gene68310:CDS | 45.0% | |
| TCTGGTAAGGATGTCAGGTT+CGG | - | chr5.2:25916797-25916816 | None:intergenic | 45.0% | |
| ! | AAACCCCAACAGAAGTACAG+AGG | - | chr5.2:25917656-25917675 | None:intergenic | 45.0% |
| ! | AACCCCAACAGAAGTACAGA+GGG | - | chr5.2:25917655-25917674 | None:intergenic | 45.0% |
| ! | CACAGGTGACTGTTTTCGTT+AGG | + | chr5.2:25917193-25917212 | MS.gene68310:intron | 45.0% |
| ! | GGGTTCCTTTTGGCAGAATT+AGG | + | chr5.2:25915921-25915940 | MS.gene68310:CDS | 45.0% |
| ! | TCTTTGAGAGATGGAAGGCA+AGG | - | chr5.2:25916542-25916561 | None:intergenic | 45.0% |
| !!! | ATATGTTTTTTTATAAAATT+TGG | - | chr5.2:25917916-25917935 | None:intergenic | 5.0% |
| !!! | TATGTTTTTTTATAAAATTT+GGG | - | chr5.2:25917915-25917934 | None:intergenic | 5.0% |
| ATGTCGTTGGCAAGGGAAGA+GGG | + | chr5.2:25915901-25915920 | MS.gene68310:CDS | 50.0% | |
| CCACAAATTCAATCCGTGCG+AGG | + | chr5.2:25918061-25918080 | MS.gene68310:CDS | 50.0% | |
| CCTGTCAAGGTTATCAAGGG+AGG | + | chr5.2:25916448-25916467 | MS.gene68310:CDS | 50.0% | |
| CTCTCGAGCGATTCATCGTT+TGG | - | chr5.2:25917468-25917487 | None:intergenic | 50.0% | |
| GAGCATGTATGTCGTTGGCA+AGG | + | chr5.2:25915893-25915912 | MS.gene68310:CDS | 50.0% | |
| TATGTCGTTGGCAAGGGAAG+AGG | + | chr5.2:25915900-25915919 | MS.gene68310:CDS | 50.0% | |
| TCGAGCGATTCATCGTTTGG+TGG | - | chr5.2:25917465-25917484 | None:intergenic | 50.0% | |
| TCGCCCTCTGTACTTCTGTT+GGG | + | chr5.2:25917649-25917668 | MS.gene68310:intron | 50.0% | |
| ! | CAAGGGAAGAGGGTTCCTTT+TGG | + | chr5.2:25915911-25915930 | MS.gene68310:CDS | 50.0% |
| ! | CCTCCCTTGATAACCTTGAC+AGG | - | chr5.2:25916451-25916470 | None:intergenic | 50.0% |
| ! | CCTCGCACGGATTGAATTTG+TGG | - | chr5.2:25918064-25918083 | None:intergenic | 50.0% |
| !! | GAAAGGCTTTGAATGCTCGC+TGG | - | chr5.2:25916887-25916906 | None:intergenic | 50.0% |
| CGCCCTCTGTACTTCTGTTG+GGG | + | chr5.2:25917650-25917669 | MS.gene68310:intron | 55.0% | |
| GTCGCCCTCTGTACTTCTGT+TGG | + | chr5.2:25917648-25917667 | MS.gene68310:intron | 55.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 25915873 | 25918167 | 25915873 | ID=MS.gene68310 |
| chr5.2 | mRNA | 25915873 | 25918167 | 25915873 | ID=MS.gene68310.t1;Parent=MS.gene68310 |
| chr5.2 | exon | 25915873 | 25916971 | 25915873 | ID=MS.gene68310.t1.exon1;Parent=MS.gene68310.t1 |
| chr5.2 | CDS | 25915873 | 25916971 | 25915873 | ID=cds.MS.gene68310.t1;Parent=MS.gene68310.t1 |
| chr5.2 | exon | 25918055 | 25918167 | 25918055 | ID=MS.gene68310.t1.exon2;Parent=MS.gene68310.t1 |
| chr5.2 | CDS | 25918055 | 25918167 | 25918055 | ID=cds.MS.gene68310.t1;Parent=MS.gene68310.t1 |
| Gene Sequence |
| Protein sequence |
