Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68334.t1 | XP_003613303.1 | 92.7 | 440 | 32 | 0 | 1 | 440 | 1 | 440 | 4.50E-251 | 876.7 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68334.t1 | O04523 | 59.2 | 419 | 154 | 6 | 20 | 437 | 13 | 415 | 2.2e-145 | 516.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68334.t1 | G7K2T5 | 92.7 | 440 | 32 | 0 | 1 | 440 | 1 | 440 | 3.3e-251 | 876.7 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene048911 | MS.gene68334 | PPI |
MS.gene55781 | MS.gene68334 | PPI |
MS.gene06056 | MS.gene68334 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68334.t1 | MTR_5g035070 | 96.818 | 440 | 14 | 0 | 1 | 440 | 1 | 440 | 0.0 | 893 |
MS.gene68334.t1 | MTR_5g035090 | 68.950 | 438 | 132 | 4 | 3 | 440 | 1 | 434 | 0.0 | 633 |
MS.gene68334.t1 | MTR_5g035150 | 65.517 | 435 | 148 | 2 | 5 | 437 | 1 | 435 | 0.0 | 600 |
MS.gene68334.t1 | MTR_5g035080 | 62.779 | 403 | 132 | 5 | 38 | 437 | 37 | 424 | 0.0 | 524 |
MS.gene68334.t1 | MTR_3g109840 | 57.500 | 440 | 162 | 9 | 4 | 440 | 5 | 422 | 2.35e-180 | 510 |
MS.gene68334.t1 | MTR_8g104970 | 51.489 | 470 | 178 | 7 | 18 | 441 | 8 | 473 | 3.43e-172 | 491 |
MS.gene68334.t1 | MTR_7g033230 | 58.221 | 371 | 145 | 5 | 68 | 435 | 248 | 611 | 3.91e-160 | 466 |
MS.gene68334.t1 | MTR_7g033230 | 58.221 | 371 | 145 | 5 | 68 | 435 | 318 | 681 | 3.00e-159 | 466 |
MS.gene68334.t1 | MTR_5g035140 | 62.313 | 268 | 94 | 4 | 174 | 438 | 7 | 270 | 1.75e-120 | 352 |
MS.gene68334.t1 | MTR_6g016880 | 41.404 | 413 | 224 | 10 | 30 | 434 | 18 | 420 | 1.48e-112 | 338 |
MS.gene68334.t1 | MTR_8g099300 | 39.862 | 434 | 241 | 10 | 5 | 433 | 1 | 419 | 1.56e-107 | 325 |
MS.gene68334.t1 | MTR_7g019120 | 39.059 | 425 | 236 | 10 | 17 | 434 | 13 | 421 | 2.12e-106 | 322 |
MS.gene68334.t1 | MTR_8g027900 | 45.787 | 356 | 179 | 7 | 84 | 433 | 208 | 555 | 3.01e-106 | 326 |
MS.gene68334.t1 | MTR_6g007777 | 36.481 | 466 | 247 | 12 | 8 | 435 | 5 | 459 | 2.40e-96 | 298 |
MS.gene68334.t1 | MTR_6g016875 | 38.983 | 413 | 217 | 9 | 30 | 434 | 24 | 409 | 1.14e-91 | 284 |
MS.gene68334.t1 | MTR_2g016060 | 40.274 | 365 | 192 | 14 | 84 | 435 | 51 | 402 | 1.18e-85 | 268 |
MS.gene68334.t1 | MTR_1g076690 | 36.438 | 365 | 208 | 11 | 87 | 438 | 223 | 576 | 2.34e-70 | 233 |
MS.gene68334.t1 | MTR_6g061710 | 33.741 | 409 | 240 | 10 | 43 | 435 | 123 | 516 | 1.05e-68 | 227 |
MS.gene68334.t1 | MTR_7g094750 | 34.072 | 361 | 209 | 13 | 87 | 435 | 91 | 434 | 1.41e-55 | 191 |
MS.gene68334.t1 | MTR_0136s0010 | 35.792 | 366 | 195 | 14 | 87 | 435 | 170 | 512 | 1.45e-53 | 187 |
MS.gene68334.t1 | MTR_7g093450 | 35.933 | 359 | 191 | 13 | 87 | 429 | 248 | 583 | 1.71e-53 | 188 |
MS.gene68334.t1 | MTR_5g035120 | 52.874 | 174 | 71 | 3 | 5 | 177 | 2 | 165 | 3.63e-53 | 176 |
MS.gene68334.t1 | MTR_2g022560 | 34.066 | 364 | 210 | 14 | 86 | 437 | 96 | 441 | 3.46e-49 | 174 |
MS.gene68334.t1 | MTR_4g126950 | 31.458 | 391 | 231 | 15 | 57 | 433 | 79 | 446 | 4.22e-48 | 171 |
MS.gene68334.t1 | MTR_4g121560 | 29.397 | 398 | 238 | 15 | 57 | 433 | 78 | 453 | 8.71e-47 | 167 |
MS.gene68334.t1 | MTR_5g059400 | 31.675 | 382 | 205 | 15 | 86 | 440 | 174 | 526 | 2.69e-46 | 167 |
MS.gene68334.t1 | MTR_1g116130 | 31.675 | 382 | 205 | 15 | 86 | 440 | 174 | 526 | 2.69e-46 | 167 |
MS.gene68334.t1 | MTR_8g069790 | 30.245 | 367 | 219 | 12 | 87 | 438 | 178 | 522 | 1.28e-45 | 166 |
MS.gene68334.t1 | MTR_5g033800 | 28.272 | 382 | 226 | 13 | 78 | 439 | 137 | 490 | 5.65e-45 | 163 |
MS.gene68334.t1 | MTR_4g016940 | 29.834 | 362 | 229 | 11 | 82 | 433 | 81 | 427 | 5.29e-44 | 159 |
MS.gene68334.t1 | MTR_8g093530 | 29.494 | 356 | 209 | 11 | 87 | 431 | 90 | 414 | 1.64e-43 | 158 |
MS.gene68334.t1 | MTR_5g071350 | 30.328 | 366 | 227 | 11 | 75 | 429 | 47 | 395 | 3.95e-43 | 156 |
MS.gene68334.t1 | MTR_7g109550 | 31.421 | 366 | 207 | 13 | 87 | 438 | 137 | 472 | 7.39e-43 | 157 |
MS.gene68334.t1 | MTR_7g070060 | 29.539 | 369 | 221 | 15 | 80 | 429 | 57 | 405 | 7.73e-42 | 153 |
MS.gene68334.t1 | MTR_1g058380 | 27.739 | 429 | 253 | 16 | 29 | 438 | 10 | 400 | 2.96e-41 | 151 |
MS.gene68334.t1 | MTR_7g068920 | 31.492 | 362 | 223 | 13 | 82 | 433 | 75 | 421 | 7.48e-41 | 150 |
MS.gene68334.t1 | MTR_7g094750 | 35.772 | 246 | 141 | 6 | 87 | 323 | 91 | 328 | 7.88e-41 | 148 |
MS.gene68334.t1 | MTR_4g014440 | 30.110 | 362 | 214 | 14 | 87 | 429 | 62 | 403 | 1.67e-40 | 149 |
MS.gene68334.t1 | MTR_3g070900 | 30.137 | 365 | 208 | 15 | 87 | 429 | 106 | 445 | 2.05e-40 | 150 |
MS.gene68334.t1 | MTR_3g464570 | 30.286 | 350 | 219 | 12 | 86 | 429 | 42 | 372 | 1.26e-39 | 146 |
MS.gene68334.t1 | MTR_8g463790 | 28.962 | 366 | 218 | 12 | 87 | 435 | 71 | 411 | 1.61e-39 | 147 |
MS.gene68334.t1 | MTR_3g035830 | 30.058 | 346 | 209 | 10 | 86 | 429 | 30 | 344 | 2.24e-39 | 145 |
MS.gene68334.t1 | MTR_3g021090 | 31.054 | 351 | 199 | 14 | 86 | 429 | 30 | 344 | 6.02e-39 | 145 |
MS.gene68334.t1 | MTR_3g021060 | 30.286 | 350 | 201 | 12 | 87 | 429 | 46 | 359 | 3.82e-38 | 142 |
MS.gene68334.t1 | MTR_5g083260 | 27.610 | 431 | 268 | 14 | 19 | 430 | 16 | 421 | 5.42e-38 | 143 |
MS.gene68334.t1 | MTR_1g050448 | 30.000 | 360 | 220 | 10 | 78 | 433 | 44 | 375 | 5.12e-37 | 139 |
MS.gene68334.t1 | MTR_4g125060 | 28.351 | 388 | 210 | 13 | 75 | 430 | 117 | 468 | 1.63e-36 | 140 |
MS.gene68334.t1 | MTR_2g091175 | 30.347 | 346 | 205 | 12 | 87 | 429 | 50 | 362 | 2.04e-36 | 137 |
MS.gene68334.t1 | MTR_4g125060 | 28.158 | 380 | 208 | 12 | 80 | 430 | 164 | 507 | 2.63e-36 | 140 |
MS.gene68334.t1 | MTR_4g125060 | 28.158 | 380 | 208 | 12 | 80 | 430 | 193 | 536 | 3.25e-36 | 140 |
MS.gene68334.t1 | MTR_1g112210 | 28.767 | 365 | 193 | 15 | 87 | 429 | 59 | 378 | 4.24e-36 | 137 |
MS.gene68334.t1 | MTR_8g093870 | 26.234 | 385 | 224 | 12 | 74 | 430 | 117 | 469 | 6.70e-36 | 138 |
MS.gene68334.t1 | MTR_3g071650 | 27.635 | 427 | 265 | 17 | 27 | 430 | 22 | 427 | 7.79e-36 | 137 |
MS.gene68334.t1 | MTR_7g019140 | 40.491 | 163 | 87 | 3 | 19 | 178 | 15 | 170 | 3.02e-35 | 129 |
MS.gene68334.t1 | MTR_3g090120 | 27.553 | 421 | 251 | 17 | 30 | 433 | 76 | 459 | 3.12e-35 | 136 |
MS.gene68334.t1 | MTR_3g049330 | 29.412 | 357 | 215 | 10 | 78 | 429 | 22 | 346 | 3.20e-35 | 134 |
MS.gene68334.t1 | MTR_1g112210 | 28.729 | 362 | 184 | 15 | 87 | 429 | 59 | 365 | 6.15e-35 | 133 |
MS.gene68334.t1 | MTR_4g088030 | 27.095 | 358 | 225 | 10 | 73 | 429 | 24 | 346 | 1.35e-34 | 132 |
MS.gene68334.t1 | MTR_2g073500 | 30.199 | 351 | 199 | 14 | 87 | 429 | 29 | 341 | 1.71e-34 | 132 |
MS.gene68334.t1 | MTR_6g016240 | 30.189 | 371 | 208 | 17 | 86 | 431 | 70 | 414 | 2.11e-34 | 133 |
MS.gene68334.t1 | MTR_4g079700 | 27.494 | 411 | 237 | 13 | 29 | 433 | 8 | 363 | 2.21e-34 | 132 |
MS.gene68334.t1 | MTR_4g087730 | 28.099 | 363 | 214 | 12 | 75 | 429 | 35 | 358 | 7.53e-34 | 130 |
MS.gene68334.t1 | MTR_5g082880 | 28.415 | 366 | 216 | 15 | 87 | 429 | 165 | 507 | 2.05e-33 | 132 |
MS.gene68334.t1 | MTR_2g073510 | 29.972 | 357 | 204 | 14 | 87 | 433 | 33 | 353 | 3.02e-33 | 128 |
MS.gene68334.t1 | MTR_4g014430 | 27.749 | 382 | 220 | 15 | 76 | 433 | 97 | 446 | 2.64e-32 | 127 |
MS.gene68334.t1 | MTR_2g015720 | 29.060 | 351 | 217 | 12 | 84 | 433 | 39 | 358 | 3.55e-32 | 125 |
MS.gene68334.t1 | MTR_1g111010 | 29.944 | 354 | 197 | 16 | 87 | 433 | 32 | 341 | 3.07e-31 | 123 |
MS.gene68334.t1 | MTR_5g034810 | 29.609 | 358 | 215 | 13 | 76 | 429 | 24 | 348 | 2.01e-30 | 120 |
MS.gene68334.t1 | MTR_5g033800 | 29.615 | 260 | 151 | 8 | 78 | 322 | 137 | 379 | 2.30e-30 | 121 |
MS.gene68334.t1 | MTR_4g092830 | 25.926 | 378 | 216 | 15 | 87 | 433 | 48 | 392 | 1.25e-27 | 114 |
MS.gene68334.t1 | MTR_7g070060 | 33.862 | 189 | 110 | 5 | 80 | 259 | 57 | 239 | 1.79e-27 | 112 |
MS.gene68334.t1 | MTR_4g102570 | 38.462 | 156 | 83 | 4 | 203 | 352 | 2 | 150 | 7.37e-26 | 103 |
MS.gene68334.t1 | MTR_7g070060 | 27.508 | 309 | 186 | 14 | 139 | 429 | 15 | 303 | 3.10e-23 | 99.8 |
MS.gene68334.t1 | MTR_7g117160 | 32.420 | 219 | 90 | 7 | 214 | 432 | 29 | 189 | 3.52e-22 | 94.0 |
MS.gene68334.t1 | MTR_7g019130 | 35.938 | 128 | 75 | 3 | 205 | 328 | 1 | 125 | 5.14e-22 | 92.0 |
MS.gene68334.t1 | MTR_3g464570 | 26.667 | 285 | 184 | 12 | 151 | 429 | 3 | 268 | 1.88e-18 | 85.5 |
MS.gene68334.t1 | MTR_0929s0010 | 55.102 | 49 | 22 | 0 | 87 | 135 | 79 | 127 | 4.05e-15 | 72.0 |
MS.gene68334.t1 | MTR_0929s0020 | 34.524 | 84 | 52 | 1 | 205 | 285 | 1 | 84 | 8.49e-13 | 64.3 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene68334.t1 | AT1G70230 | 57.518 | 419 | 161 | 6 | 20 | 437 | 13 | 415 | 4.47e-179 | 506 |
MS.gene68334.t1 | AT1G01430 | 42.785 | 395 | 208 | 9 | 46 | 433 | 64 | 447 | 4.43e-106 | 322 |
MS.gene68334.t1 | AT4G01080 | 45.380 | 368 | 178 | 12 | 73 | 431 | 75 | 428 | 8.89e-105 | 318 |
MS.gene68334.t1 | AT5G15890 | 41.624 | 394 | 212 | 8 | 42 | 434 | 147 | 523 | 6.49e-104 | 319 |
MS.gene68334.t1 | AT3G02440 | 43.503 | 354 | 183 | 7 | 87 | 434 | 135 | 477 | 9.42e-101 | 309 |
MS.gene68334.t1 | AT3G02440 | 43.503 | 354 | 183 | 7 | 87 | 434 | 127 | 469 | 1.11e-100 | 309 |
MS.gene68334.t1 | AT4G23790 | 39.277 | 415 | 240 | 8 | 27 | 433 | 17 | 427 | 1.64e-100 | 307 |
MS.gene68334.t1 | AT5G15900 | 41.388 | 389 | 197 | 12 | 66 | 437 | 39 | 413 | 1.10e-97 | 300 |
MS.gene68334.t1 | AT5G15900 | 41.388 | 389 | 197 | 12 | 66 | 437 | 58 | 432 | 3.09e-97 | 299 |
MS.gene68334.t1 | AT3G28150 | 41.127 | 355 | 195 | 7 | 85 | 435 | 68 | 412 | 1.78e-95 | 293 |
MS.gene68334.t1 | AT4G11090 | 41.161 | 379 | 209 | 9 | 62 | 433 | 54 | 425 | 1.87e-93 | 289 |
MS.gene68334.t1 | AT4G25360 | 36.247 | 389 | 227 | 9 | 59 | 435 | 147 | 526 | 1.19e-74 | 243 |
MS.gene68334.t1 | AT4G25360 | 36.247 | 389 | 227 | 9 | 59 | 435 | 147 | 526 | 1.19e-74 | 243 |
MS.gene68334.t1 | AT5G51640 | 35.616 | 365 | 207 | 11 | 87 | 435 | 138 | 490 | 1.26e-66 | 221 |
MS.gene68334.t1 | AT5G19160 | 33.702 | 362 | 221 | 9 | 87 | 439 | 99 | 450 | 1.02e-55 | 191 |
MS.gene68334.t1 | AT3G12060 | 31.378 | 392 | 230 | 13 | 54 | 429 | 163 | 531 | 5.63e-51 | 181 |
MS.gene68334.t1 | AT3G06080 | 34.807 | 362 | 212 | 12 | 87 | 438 | 103 | 450 | 6.06e-51 | 179 |
MS.gene68334.t1 | AT5G06700 | 33.880 | 366 | 202 | 16 | 87 | 435 | 255 | 597 | 1.72e-49 | 178 |
MS.gene68334.t1 | AT5G64020 | 31.250 | 368 | 212 | 13 | 86 | 430 | 56 | 405 | 9.20e-48 | 169 |
MS.gene68334.t1 | AT1G48880 | 34.254 | 362 | 180 | 16 | 87 | 430 | 115 | 436 | 1.52e-47 | 169 |
MS.gene68334.t1 | AT5G20590 | 32.961 | 358 | 202 | 13 | 87 | 429 | 141 | 475 | 7.00e-47 | 168 |
MS.gene68334.t1 | AT2G30010 | 31.169 | 385 | 231 | 13 | 63 | 433 | 32 | 396 | 2.03e-44 | 160 |
MS.gene68334.t1 | AT5G06230 | 32.231 | 363 | 209 | 14 | 84 | 429 | 18 | 360 | 3.26e-44 | 159 |
MS.gene68334.t1 | AT5G49340 | 30.155 | 388 | 241 | 14 | 57 | 433 | 73 | 441 | 3.26e-44 | 160 |
MS.gene68334.t1 | AT3G11570 | 31.977 | 344 | 191 | 13 | 103 | 429 | 98 | 415 | 4.03e-44 | 160 |
MS.gene68334.t1 | AT5G06230 | 32.231 | 363 | 209 | 14 | 84 | 429 | 59 | 401 | 4.65e-44 | 159 |
MS.gene68334.t1 | AT2G30010 | 31.169 | 385 | 231 | 13 | 63 | 433 | 75 | 439 | 4.97e-44 | 160 |
MS.gene68334.t1 | AT3G62390 | 30.328 | 366 | 209 | 12 | 87 | 435 | 138 | 474 | 4.95e-43 | 158 |
MS.gene68334.t1 | AT2G40160 | 28.404 | 426 | 251 | 18 | 30 | 429 | 22 | 419 | 2.71e-42 | 155 |
MS.gene68334.t1 | AT2G40160 | 28.404 | 426 | 251 | 18 | 30 | 429 | 22 | 419 | 3.59e-42 | 155 |
MS.gene68334.t1 | AT1G73140 | 31.978 | 369 | 208 | 17 | 78 | 429 | 59 | 401 | 1.06e-41 | 153 |
MS.gene68334.t1 | AT2G14530 | 29.777 | 403 | 227 | 16 | 58 | 433 | 33 | 406 | 1.16e-41 | 152 |
MS.gene68334.t1 | AT5G19160 | 36.475 | 244 | 140 | 6 | 87 | 322 | 99 | 335 | 1.47e-40 | 148 |
MS.gene68334.t1 | AT1G60790 | 29.459 | 370 | 214 | 14 | 87 | 434 | 190 | 534 | 4.65e-40 | 150 |
MS.gene68334.t1 | AT2G40320 | 28.969 | 359 | 222 | 13 | 86 | 430 | 80 | 419 | 1.51e-39 | 147 |
MS.gene68334.t1 | AT5G58600 | 29.558 | 362 | 215 | 12 | 86 | 433 | 65 | 400 | 2.73e-39 | 146 |
MS.gene68334.t1 | AT2G38320 | 28.775 | 351 | 233 | 10 | 87 | 429 | 59 | 400 | 6.61e-39 | 145 |
MS.gene68334.t1 | AT2G37720 | 28.533 | 368 | 218 | 11 | 82 | 430 | 138 | 479 | 8.19e-39 | 146 |
MS.gene68334.t1 | AT3G11030 | 29.050 | 358 | 222 | 13 | 87 | 430 | 106 | 445 | 1.18e-38 | 145 |
MS.gene68334.t1 | AT5G01360 | 28.919 | 370 | 217 | 15 | 82 | 430 | 31 | 375 | 4.41e-38 | 142 |
MS.gene68334.t1 | AT2G42570 | 30.966 | 352 | 204 | 13 | 87 | 433 | 47 | 364 | 5.16e-38 | 142 |
MS.gene68334.t1 | AT3G55990 | 30.194 | 361 | 213 | 14 | 87 | 429 | 140 | 479 | 7.38e-38 | 144 |
MS.gene68334.t1 | AT5G01360 | 28.571 | 371 | 217 | 15 | 82 | 430 | 87 | 431 | 1.43e-37 | 142 |
MS.gene68334.t1 | AT3G14850 | 29.096 | 354 | 211 | 10 | 87 | 433 | 34 | 354 | 1.43e-37 | 140 |
MS.gene68334.t1 | AT2G30900 | 29.226 | 349 | 211 | 10 | 87 | 429 | 43 | 361 | 8.53e-37 | 139 |
MS.gene68334.t1 | AT2G40150 | 28.608 | 388 | 236 | 15 | 64 | 429 | 48 | 416 | 9.51e-37 | 139 |
MS.gene68334.t1 | AT2G31110 | 29.191 | 346 | 210 | 12 | 87 | 429 | 45 | 358 | 2.18e-36 | 137 |
MS.gene68334.t1 | AT2G34070 | 28.045 | 353 | 220 | 12 | 84 | 433 | 62 | 383 | 3.47e-36 | 137 |
MS.gene68334.t1 | AT3G06080 | 35.366 | 246 | 142 | 7 | 87 | 323 | 103 | 340 | 4.99e-35 | 133 |
MS.gene68334.t1 | AT1G78710 | 30.423 | 355 | 203 | 13 | 87 | 433 | 38 | 356 | 6.20e-35 | 133 |
MS.gene68334.t1 | AT5G64470 | 27.926 | 376 | 220 | 15 | 80 | 433 | 48 | 394 | 1.78e-34 | 133 |
MS.gene68334.t1 | AT5G64470 | 27.749 | 382 | 219 | 16 | 80 | 433 | 48 | 400 | 1.27e-33 | 130 |
MS.gene68334.t1 | AT2G38320 | 28.438 | 320 | 213 | 9 | 117 | 429 | 7 | 317 | 1.31e-33 | 129 |
MS.gene68334.t1 | AT1G29050 | 28.736 | 348 | 217 | 13 | 87 | 433 | 61 | 378 | 2.11e-33 | 129 |
MS.gene68334.t1 | AT5G20680 | 27.151 | 372 | 216 | 14 | 86 | 433 | 117 | 457 | 5.68e-33 | 130 |
MS.gene68334.t1 | AT5G20680 | 27.224 | 371 | 215 | 14 | 87 | 433 | 194 | 533 | 6.93e-33 | 130 |
MS.gene68334.t1 | AT5G20680 | 27.224 | 371 | 215 | 14 | 87 | 433 | 212 | 551 | 7.38e-33 | 130 |
MS.gene68334.t1 | AT5G20680 | 27.224 | 371 | 215 | 14 | 87 | 433 | 212 | 551 | 7.38e-33 | 130 |
MS.gene68334.t1 | AT5G20680 | 27.224 | 371 | 215 | 14 | 87 | 433 | 212 | 551 | 7.38e-33 | 130 |
MS.gene68334.t1 | AT5G20680 | 27.224 | 371 | 215 | 14 | 87 | 433 | 212 | 551 | 7.38e-33 | 130 |
MS.gene68334.t1 | AT5G01620 | 27.078 | 373 | 225 | 14 | 81 | 433 | 104 | 449 | 3.47e-32 | 127 |
MS.gene68334.t1 | AT5G01620 | 27.078 | 373 | 225 | 14 | 81 | 433 | 104 | 449 | 3.47e-32 | 127 |
MS.gene68334.t1 | AT5G01620 | 27.078 | 373 | 225 | 14 | 81 | 433 | 112 | 457 | 4.12e-32 | 127 |
MS.gene68334.t1 | AT2G40160 | 28.664 | 307 | 188 | 10 | 30 | 322 | 22 | 311 | 1.16e-31 | 123 |
MS.gene68334.t1 | AT3G54260 | 29.213 | 356 | 211 | 14 | 87 | 433 | 51 | 374 | 1.33e-31 | 124 |
MS.gene68334.t1 | AT5G20590 | 32.669 | 251 | 142 | 9 | 87 | 323 | 141 | 378 | 2.90e-31 | 124 |
MS.gene68334.t1 | AT3G62390 | 31.148 | 244 | 155 | 6 | 87 | 324 | 138 | 374 | 3.40e-30 | 121 |
MS.gene68334.t1 | AT5G06230 | 32.031 | 256 | 149 | 9 | 84 | 323 | 59 | 305 | 1.70e-28 | 114 |
MS.gene68334.t1 | AT5G58600 | 31.535 | 241 | 144 | 8 | 86 | 321 | 65 | 289 | 4.31e-27 | 110 |
MS.gene68334.t1 | AT2G30900 | 31.053 | 190 | 124 | 3 | 87 | 275 | 43 | 226 | 2.37e-25 | 105 |
MS.gene68334.t1 | AT2G31110 | 32.759 | 174 | 110 | 3 | 87 | 260 | 45 | 211 | 1.12e-24 | 103 |
MS.gene68334.t1 | AT1G78710 | 32.948 | 173 | 107 | 4 | 87 | 258 | 31 | 195 | 9.77e-21 | 92.4 |
MS.gene68334.t1 | AT5G64470 | 26.460 | 291 | 180 | 12 | 80 | 351 | 48 | 323 | 5.84e-20 | 90.9 |
MS.gene68334.t1 | AT5G64470 | 27.338 | 278 | 168 | 12 | 79 | 337 | 47 | 309 | 1.11e-19 | 89.7 |
MS.gene68334.t1 | AT3G14850 | 25.442 | 283 | 171 | 10 | 158 | 433 | 2 | 251 | 1.67e-14 | 73.6 |
Find 109 sgRNAs with CRISPR-Local
Find 130 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
GGTCTTAATCACACTGAAAT+TGG | 0.125051 | 5.2:-25585901 | MS.gene68334:CDS |
TCCTATCAATTATACTATTA+AGG | 0.152448 | 5.2:+25585842 | None:intergenic |
AACAAAGATGGTCATGAAAA+TGG | 0.212233 | 5.2:-25586864 | None:intergenic |
GGCACTTGATGTAACTAAAT+TGG | 0.237596 | 5.2:-25585599 | MS.gene68334:CDS |
ATGCAAGTGTGTCAGTTTAT+TGG | 0.262767 | 5.2:-25586122 | MS.gene68334:CDS |
GTGACTACTTCAATGGAAAA+TGG | 0.280998 | 5.2:-25586467 | MS.gene68334:CDS |
TCCTTCTCCCTACTTCTATA+AGG | 0.286857 | 5.2:+25585718 | None:intergenic |
AAATACAACTTATTATGATT+TGG | 0.295848 | 5.2:+25586057 | None:intergenic |
CTGATGCTGATTATCTTTAC+TGG | 0.306828 | 5.2:-25586359 | MS.gene68334:CDS |
TGAAAGATGGGCAAAGGATA+TGG | 0.342119 | 5.2:-25586022 | MS.gene68334:CDS |
TTCTTGAGATCATGAAGAAA+TGG | 0.362655 | 5.2:-25585441 | MS.gene68334:CDS |
AATGGAAAAGGGTACATATA+AGG | 0.371725 | 5.2:+25585547 | None:intergenic |
TGTGTTCATTGGTGTTTGCC+TGG | 0.372187 | 5.2:-25585490 | MS.gene68334:CDS |
CCTATCAATTATACTATTAA+GGG | 0.374427 | 5.2:+25585843 | None:intergenic |
TTGTGCTTTCAATTGGTCAT+TGG | 0.379558 | 5.2:-25585984 | MS.gene68334:CDS |
ATGAGTTGAAGAAAAGTGTT+AGG | 0.387924 | 5.2:+25586297 | None:intergenic |
GGAAGCTCAGATTCAGTAGA+TGG | 0.390311 | 5.2:+25586719 | None:intergenic |
CCACTTGTGTAAACAAGTTC+AGG | 0.392892 | 5.2:+25586186 | None:intergenic |
CTGATTATCTTTACTGGAGA+TGG | 0.393599 | 5.2:-25586353 | MS.gene68334:CDS |
TAGATCTTGTTGATGAAAGA+TGG | 0.395598 | 5.2:-25586035 | MS.gene68334:CDS |
ATTGATAGGAGAGGAAATAA+AGG | 0.397784 | 5.2:-25585829 | MS.gene68334:CDS |
AAGGTGAAAGGAAGTGAATT+TGG | 0.402831 | 5.2:-25585637 | MS.gene68334:CDS |
TCAACACCTTGAACAAGAAA+AGG | 0.403244 | 5.2:+25586096 | None:intergenic |
AAACTAAGCCTTATAGAAGT+AGG | 0.405114 | 5.2:-25585726 | MS.gene68334:CDS |
AGGTGTAGAGTGGGAGATGA+TGG | 0.405251 | 5.2:+25586682 | None:intergenic |
ACTCATTGAAAACAAACATA+TGG | 0.411083 | 5.2:-25586280 | MS.gene68334:CDS |
GTCTTAATCACACTGAAATT+GGG | 0.413858 | 5.2:-25585900 | MS.gene68334:CDS |
TAAAAGAAGGAGGTGTAGAG+TGG | 0.427411 | 5.2:+25586672 | None:intergenic |
TGCAAAATGATTGTGTTCAT+TGG | 0.427697 | 5.2:-25585501 | MS.gene68334:CDS |
ATTTGGAGGGGTTAGGTTTG+AGG | 0.439421 | 5.2:-25585620 | MS.gene68334:CDS |
ACCCCATTAGCAAATGGAAA+AGG | 0.442392 | 5.2:+25585535 | None:intergenic |
TCTTGAGATCATGAAGAAAT+GGG | 0.442784 | 5.2:-25585440 | MS.gene68334:CDS |
CCCACATGTGACTACTTCAA+TGG | 0.443622 | 5.2:-25586474 | MS.gene68334:CDS |
TTAGGTTGTCATTATTGTGT+TGG | 0.447247 | 5.2:-25585922 | MS.gene68334:CDS |
GAGTGGAATTGATCTTTGAA+TGG | 0.450724 | 5.2:+25586830 | None:intergenic |
CATGTTGTTCCATTGTATAA+AGG | 0.454390 | 5.2:+25586426 | None:intergenic |
CAACACCTTGAACAAGAAAA+GGG | 0.457580 | 5.2:+25586097 | None:intergenic |
GGCAAAGGATATGGAAAGGA+TGG | 0.461465 | 5.2:-25586013 | MS.gene68334:CDS |
TAAGGACCTGGATGACCATC+TGG | 0.461971 | 5.2:+25585565 | None:intergenic |
GTGAAGATAATAAATTTAGA+AGG | 0.462452 | 5.2:-25586164 | MS.gene68334:CDS |
TGCCTGGACCTATAGATACT+TGG | 0.463354 | 5.2:-25585474 | MS.gene68334:CDS |
CTTGGAAGCTTACATTCACT+TGG | 0.465242 | 5.2:+25586327 | None:intergenic |
GCATCCTGCAGTTTACTATG+AGG | 0.470478 | 5.2:-25585956 | MS.gene68334:CDS |
ACAAAGATGGTCATGAAAAT+GGG | 0.471677 | 5.2:-25586863 | None:intergenic |
TTGAGACCAGATGGTCATCC+AGG | 0.479603 | 5.2:-25585571 | MS.gene68334:CDS |
CAAGTGAATGTAAGCTTCCA+AGG | 0.484258 | 5.2:-25586326 | MS.gene68334:CDS |
TAGATGGAAGAAAGGGAAGA+GGG | 0.486400 | 5.2:+25586735 | None:intergenic |
TATAAACTAAGAAGAGCAAT+GGG | 0.491035 | 5.2:+25586764 | None:intergenic |
GGAGAAGGAACTTGAAGGAA+TGG | 0.495842 | 5.2:-25585704 | MS.gene68334:CDS |
GAAGTGAATTTGGAGGGGTT+AGG | 0.498277 | 5.2:-25585627 | MS.gene68334:CDS |
GGTGTTGAGAAATCAAATGA+TGG | 0.501614 | 5.2:-25586081 | MS.gene68334:CDS |
GATTCAGTAGATGGAAGAAA+GGG | 0.502270 | 5.2:+25586728 | None:intergenic |
TTGTTGGTGATTCTATGGCT+AGG | 0.502299 | 5.2:-25586254 | MS.gene68334:CDS |
CAGTAAAGATAATCAGCATC+AGG | 0.502532 | 5.2:+25586360 | None:intergenic |
AGATCTTGTTGATGAAAGAT+GGG | 0.502869 | 5.2:-25586034 | MS.gene68334:CDS |
AAAAGAAGGAGGTGTAGAGT+GGG | 0.507492 | 5.2:+25586673 | None:intergenic |
GTTGAAGATGCTAAGGTGAA+AGG | 0.508663 | 5.2:-25585649 | MS.gene68334:CDS |
CCCTTAATAGTATAATTGAT+AGG | 0.509511 | 5.2:-25585843 | MS.gene68334:CDS |
GTAGATGGAAGAAAGGGAAG+AGG | 0.509775 | 5.2:+25586734 | None:intergenic |
TGAAGAAGTTGAAGATGCTA+AGG | 0.511290 | 5.2:-25585656 | MS.gene68334:CDS |
AGTAGGGAGAAGGAACTTGA+AGG | 0.514231 | 5.2:-25585709 | MS.gene68334:CDS |
CCATTGAAGTAGTCACATGT+GGG | 0.515482 | 5.2:+25586474 | None:intergenic |
AACTAAGCCTTATAGAAGTA+GGG | 0.515898 | 5.2:-25585725 | MS.gene68334:CDS |
CATAAACGTACCTGAAGGAG+GGG | 0.517380 | 5.2:+25586640 | None:intergenic |
CATCCTGCAGTTTACTATGA+GGG | 0.517488 | 5.2:-25585955 | MS.gene68334:CDS |
CCTGAACTTGTTTACACAAG+TGG | 0.519266 | 5.2:-25586186 | MS.gene68334:CDS |
AGATTCAGTAGATGGAAGAA+AGG | 0.521045 | 5.2:+25586727 | None:intergenic |
AGAAGAGCATAAAGAGTCCA+AGG | 0.521608 | 5.2:+25586788 | None:intergenic |
CCCCATTAGCAAATGGAAAA+GGG | 0.522058 | 5.2:+25585536 | None:intergenic |
ATCTCATTCCAAGTATCTAT+AGG | 0.524335 | 5.2:+25585466 | None:intergenic |
AAAGTGTTAGGCTCAAACCT+TGG | 0.534233 | 5.2:+25586309 | None:intergenic |
TACCTCACTCTTCACTCTAG+TGG | 0.537525 | 5.2:+25585409 | None:intergenic |
AGTGGAATTGATCTTTGAAT+GGG | 0.540788 | 5.2:+25586831 | None:intergenic |
CATTCTCCTTCAAAATGAGC+TGG | 0.542110 | 5.2:+25585772 | None:intergenic |
TTCCAAGTATCTATAGGTCC+AGG | 0.542291 | 5.2:+25585472 | None:intergenic |
TCCATTGAAGTAGTCACATG+TGG | 0.548479 | 5.2:+25586473 | None:intergenic |
GAAGGAGAATGGGATAAAGC+TGG | 0.550749 | 5.2:-25585760 | MS.gene68334:CDS |
ATGATGGTAGTAGTTGAATG+AGG | 0.552151 | 5.2:+25586698 | None:intergenic |
TCACCCTCATAGTAAACTGC+AGG | 0.552279 | 5.2:+25585952 | None:intergenic |
TCTGGAACCCCATTAGCAAA+TGG | 0.557935 | 5.2:+25585529 | None:intergenic |
TGAAAGGAAGTGAATTTGGA+GGG | 0.562220 | 5.2:-25585633 | MS.gene68334:CDS |
ACATGTGGAACAATCAAAGA+AGG | 0.566099 | 5.2:-25586408 | MS.gene68334:CDS |
AAGATAATAAATTTAGAAGG+TGG | 0.567467 | 5.2:-25586161 | MS.gene68334:CDS |
TTATACAATGGAACAACATG+TGG | 0.569031 | 5.2:-25586423 | MS.gene68334:CDS |
ATATAAACTAAGAAGAGCAA+TGG | 0.579490 | 5.2:+25586763 | None:intergenic |
GCCTTATAGAAGTAGGGAGA+AGG | 0.580965 | 5.2:-25585719 | MS.gene68334:CDS |
TTGGCATTGTTGAGACCAGA+TGG | 0.580975 | 5.2:-25585580 | MS.gene68334:CDS |
TGCATAAACGTACCTGAAGG+AGG | 0.585332 | 5.2:+25586638 | None:intergenic |
TGTTGATGAAAGATGGGCAA+AGG | 0.591875 | 5.2:-25586028 | MS.gene68334:CDS |
ATAAAGGTCCTCTTCTATCA+CGG | 0.598847 | 5.2:+25586442 | None:intergenic |
GTGAAAGGAAGTGAATTTGG+AGG | 0.600937 | 5.2:-25585634 | MS.gene68334:CDS |
GTGTTGAGAAATCAAATGAT+GGG | 0.601066 | 5.2:-25586080 | MS.gene68334:CDS |
GAAAGGAAGTGAATTTGGAG+GGG | 0.610769 | 5.2:-25585632 | MS.gene68334:CDS |
GAGATCATGAAGAAATGGGA+GGG | 0.612763 | 5.2:-25585436 | MS.gene68334:CDS |
TAGTGAGATGAGGAAAATTG+AGG | 0.613129 | 5.2:-25585680 | MS.gene68334:CDS |
AAATGGATCCGTGATAGAAG+AGG | 0.613784 | 5.2:-25586450 | MS.gene68334:CDS |
GGTGTAGAAGTAAAAGAAGG+AGG | 0.614256 | 5.2:+25586662 | None:intergenic |
GATGGGCAAAGGATATGGAA+AGG | 0.617381 | 5.2:-25586017 | MS.gene68334:CDS |
AGAAGAGGACCTTTATACAA+TGG | 0.622543 | 5.2:-25586435 | MS.gene68334:CDS |
GCATAAACGTACCTGAAGGA+GGG | 0.633056 | 5.2:+25586639 | None:intergenic |
AAAGGGTACATATAAGGACC+TGG | 0.633154 | 5.2:+25585553 | None:intergenic |
TGAGATCATGAAGAAATGGG+AGG | 0.635992 | 5.2:-25585437 | MS.gene68334:CDS |
CATTGAAGTAGTCACATGTG+GGG | 0.636248 | 5.2:+25586475 | None:intergenic |
GGACAAAATTGTATCAAACA+TGG | 0.637951 | 5.2:-25586387 | MS.gene68334:CDS |
AATAGTATAATTGATAGGAG+AGG | 0.639029 | 5.2:-25585838 | MS.gene68334:CDS |
AAGGAATGGATAGTGAGATG+AGG | 0.645343 | 5.2:-25585690 | MS.gene68334:CDS |
AACACCTTGAACAAGAAAAG+GGG | 0.652940 | 5.2:+25586098 | None:intergenic |
ATTGAAGTAGTCACATGTGG+GGG | 0.680101 | 5.2:+25586476 | None:intergenic |
ATAAACGTACCTGAAGGAGG+GGG | 0.706780 | 5.2:+25586641 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | AAATACAACTTATTATGATT+TGG | + | chr5.2:25586223-25586242 | None:intergenic | 15.0% |
!!! | AAAAATGATGTTTTTACAAA+TGG | - | chr5.2:25585677-25585696 | MS.gene68334:CDS | 15.0% |
!!! | AAAATGATGTTTTTACAAAT+GGG | - | chr5.2:25585678-25585697 | MS.gene68334:CDS | 15.0% |
!! | AAGATAATAAATTTAGAAGG+TGG | - | chr5.2:25586116-25586135 | MS.gene68334:CDS | 20.0% |
!! | CCTATCAATTATACTATTAA+GGG | + | chr5.2:25586437-25586456 | None:intergenic | 20.0% |
!! | GTGAAGATAATAAATTTAGA+AGG | - | chr5.2:25586113-25586132 | MS.gene68334:CDS | 20.0% |
!! | TCCTATCAATTATACTATTA+AGG | + | chr5.2:25586438-25586457 | None:intergenic | 20.0% |
! | AATAGTATAATTGATAGGAG+AGG | - | chr5.2:25586439-25586458 | MS.gene68334:CDS | 25.0% |
! | AATGTTCTTTATTGCAGAAA+AGG | - | chr5.2:25585763-25585782 | MS.gene68334:CDS | 25.0% |
! | ACTCATTGAAAACAAACATA+TGG | - | chr5.2:25585997-25586016 | MS.gene68334:CDS | 25.0% |
! | ATATAAACTAAGAAGAGCAA+TGG | + | chr5.2:25585517-25585536 | None:intergenic | 25.0% |
! | CCCTTAATAGTATAATTGAT+AGG | - | chr5.2:25586434-25586453 | MS.gene68334:CDS | 25.0% |
! | TATAAACTAAGAAGAGCAAT+GGG | + | chr5.2:25585516-25585535 | None:intergenic | 25.0% |
!! | GATTTTATTGTGCTTTCAAT+TGG | - | chr5.2:25586286-25586305 | MS.gene68334:CDS | 25.0% |
!! | GTTTTATGATGTATTGAGAA+AGG | - | chr5.2:25586399-25586418 | MS.gene68334:CDS | 25.0% |
AGTGGAATTGATCTTTGAAT+GGG | + | chr5.2:25585449-25585468 | None:intergenic | 30.0% | |
ATCTCATTCCAAGTATCTAT+AGG | + | chr5.2:25586814-25586833 | None:intergenic | 30.0% | |
ATTGATAGGAGAGGAAATAA+AGG | - | chr5.2:25586448-25586467 | MS.gene68334:CDS | 30.0% | |
CATGTTGTTCCATTGTATAA+AGG | + | chr5.2:25585854-25585873 | None:intergenic | 30.0% | |
GGACAAAATTGTATCAAACA+TGG | - | chr5.2:25585890-25585909 | MS.gene68334:CDS | 30.0% | |
GTCTTAATCACACTGAAATT+GGG | - | chr5.2:25586377-25586396 | MS.gene68334:CDS | 30.0% | |
GTGTTGAGAAATCAAATGAT+GGG | - | chr5.2:25586197-25586216 | MS.gene68334:CDS | 30.0% | |
TCTTGAGATCATGAAGAAAT+GGG | - | chr5.2:25586837-25586856 | MS.gene68334:CDS | 30.0% | |
TGCAAAATGATTGTGTTCAT+TGG | - | chr5.2:25586776-25586795 | MS.gene68334:CDS | 30.0% | |
TTATACAATGGAACAACATG+TGG | - | chr5.2:25585854-25585873 | MS.gene68334:CDS | 30.0% | |
TTCTTGAGATCATGAAGAAA+TGG | - | chr5.2:25586836-25586855 | MS.gene68334:CDS | 30.0% | |
! | AAACTAAGCCTTATAGAAGT+AGG | - | chr5.2:25586551-25586570 | MS.gene68334:intron | 30.0% |
! | AACAAACATATGGCTTTTGT+TGG | - | chr5.2:25586007-25586026 | MS.gene68334:CDS | 30.0% |
! | AACTAAGCCTTATAGAAGTA+GGG | - | chr5.2:25586552-25586571 | MS.gene68334:intron | 30.0% |
! | AATGGAAAAGGGTACATATA+AGG | + | chr5.2:25586733-25586752 | None:intergenic | 30.0% |
! | AGATCTTGTTGATGAAAGAT+GGG | - | chr5.2:25586243-25586262 | MS.gene68334:CDS | 30.0% |
! | TAGATCTTGTTGATGAAAGA+TGG | - | chr5.2:25586242-25586261 | MS.gene68334:CDS | 30.0% |
! | TTAGGTTGTCATTATTGTGT+TGG | - | chr5.2:25586355-25586374 | MS.gene68334:CDS | 30.0% |
!! | ATGAGTTGAAGAAAAGTGTT+AGG | + | chr5.2:25585983-25586002 | None:intergenic | 30.0% |
!! | CTTCTATAAGGCTTAGTTTT+TGG | + | chr5.2:25586550-25586569 | None:intergenic | 30.0% |
!! | TCACCAAAAAACTTTTTCCT+TGG | - | chr5.2:25585472-25585491 | MS.gene68334:CDS | 30.0% |
!!! | AGGAAAAAGTTTTTTGGTGA+TGG | + | chr5.2:25585472-25585491 | None:intergenic | 30.0% |
!!! | AGTCCAAGGAAAAAGTTTTT+TGG | + | chr5.2:25585478-25585497 | None:intergenic | 30.0% |
AACACCTTGAACAAGAAAAG+GGG | + | chr5.2:25586182-25586201 | None:intergenic | 35.0% | |
AAGGTGAAAGGAAGTGAATT+TGG | - | chr5.2:25586640-25586659 | MS.gene68334:intron | 35.0% | |
ACATGTGGAACAATCAAAGA+AGG | - | chr5.2:25585869-25585888 | MS.gene68334:CDS | 35.0% | |
AGAAGAGGACCTTTATACAA+TGG | - | chr5.2:25585842-25585861 | MS.gene68334:CDS | 35.0% | |
AGATTCAGTAGATGGAAGAA+AGG | + | chr5.2:25585553-25585572 | None:intergenic | 35.0% | |
ATAAAGGTCCTCTTCTATCA+CGG | + | chr5.2:25585838-25585857 | None:intergenic | 35.0% | |
ATGATGGTAGTAGTTGAATG+AGG | + | chr5.2:25585582-25585601 | None:intergenic | 35.0% | |
ATGCAAGTGTGTCAGTTTAT+TGG | - | chr5.2:25586155-25586174 | MS.gene68334:CDS | 35.0% | |
CAACACCTTGAACAAGAAAA+GGG | + | chr5.2:25586183-25586202 | None:intergenic | 35.0% | |
CAGTAAAGATAATCAGCATC+AGG | + | chr5.2:25585920-25585939 | None:intergenic | 35.0% | |
CTGATTATCTTTACTGGAGA+TGG | - | chr5.2:25585924-25585943 | MS.gene68334:CDS | 35.0% | |
GAGTGGAATTGATCTTTGAA+TGG | + | chr5.2:25585450-25585469 | None:intergenic | 35.0% | |
GATTCAGTAGATGGAAGAAA+GGG | + | chr5.2:25585552-25585571 | None:intergenic | 35.0% | |
GGCACTTGATGTAACTAAAT+TGG | - | chr5.2:25586678-25586697 | MS.gene68334:CDS | 35.0% | |
GGTCTTAATCACACTGAAAT+TGG | - | chr5.2:25586376-25586395 | MS.gene68334:CDS | 35.0% | |
GTGACTACTTCAATGGAAAA+TGG | - | chr5.2:25585810-25585829 | MS.gene68334:CDS | 35.0% | |
TAGTGAGATGAGGAAAATTG+AGG | - | chr5.2:25586597-25586616 | MS.gene68334:intron | 35.0% | |
TCAACACCTTGAACAAGAAA+AGG | + | chr5.2:25586184-25586203 | None:intergenic | 35.0% | |
TGAAAGGAAGTGAATTTGGA+GGG | - | chr5.2:25586644-25586663 | MS.gene68334:intron | 35.0% | |
TGAAGAAGTTGAAGATGCTA+AGG | - | chr5.2:25586621-25586640 | MS.gene68334:intron | 35.0% | |
TTGTGCTTTCAATTGGTCAT+TGG | - | chr5.2:25586293-25586312 | MS.gene68334:CDS | 35.0% | |
! | CTGATGCTGATTATCTTTAC+TGG | - | chr5.2:25585918-25585937 | MS.gene68334:CDS | 35.0% |
! | GGTGTTGAGAAATCAAATGA+TGG | - | chr5.2:25586196-25586215 | MS.gene68334:CDS | 35.0% |
! | TATGAGGGTGATTCAGTTTT+AGG | - | chr5.2:25586337-25586356 | MS.gene68334:CDS | 35.0% |
! | TTTTCACCAGCTCATTTTGA+AGG | - | chr5.2:25586499-25586518 | MS.gene68334:CDS | 35.0% |
!! | ACCCTTTTCCATTTGCTAAT+GGG | - | chr5.2:25586740-25586759 | MS.gene68334:CDS | 35.0% |
!! | AGCTCATTTTGAAGGAGAAT+GGG | - | chr5.2:25586507-25586526 | MS.gene68334:intron | 35.0% |
!! | TACCCTTTTCCATTTGCTAA+TGG | - | chr5.2:25586739-25586758 | MS.gene68334:CDS | 35.0% |
!!! | AAAGTTTTTTGGTGATGGAG+TGG | + | chr5.2:25585467-25585486 | None:intergenic | 35.0% |
AAATGGATCCGTGATAGAAG+AGG | - | chr5.2:25585827-25585846 | MS.gene68334:CDS | 40.0% | |
AAGGAATGGATAGTGAGATG+AGG | - | chr5.2:25586587-25586606 | MS.gene68334:intron | 40.0% | |
ACCCCATTAGCAAATGGAAA+AGG | + | chr5.2:25586745-25586764 | None:intergenic | 40.0% | |
ATTGAAGTAGTCACATGTGG+GGG | + | chr5.2:25585804-25585823 | None:intergenic | 40.0% | |
CAAGTGAATGTAAGCTTCCA+AGG | - | chr5.2:25585951-25585970 | MS.gene68334:CDS | 40.0% | |
CATCCTGCAGTTTACTATGA+GGG | - | chr5.2:25586322-25586341 | MS.gene68334:CDS | 40.0% | |
CATTCTCCTTCAAAATGAGC+TGG | + | chr5.2:25586508-25586527 | None:intergenic | 40.0% | |
CATTGAAGTAGTCACATGTG+GGG | + | chr5.2:25585805-25585824 | None:intergenic | 40.0% | |
CCACTTGTGTAAACAAGTTC+AGG | + | chr5.2:25586094-25586113 | None:intergenic | 40.0% | |
CCATTGAAGTAGTCACATGT+GGG | + | chr5.2:25585806-25585825 | None:intergenic | 40.0% | |
CCCCATTAGCAAATGGAAAA+GGG | + | chr5.2:25586744-25586763 | None:intergenic | 40.0% | |
CTTGGAAGCTTACATTCACT+TGG | + | chr5.2:25585953-25585972 | None:intergenic | 40.0% | |
GAAAGGAAGTGAATTTGGAG+GGG | - | chr5.2:25586645-25586664 | MS.gene68334:intron | 40.0% | |
GAGATCATGAAGAAATGGGA+GGG | - | chr5.2:25586841-25586860 | MS.gene68334:CDS | 40.0% | |
GGTGTAGAAGTAAAAGAAGG+AGG | + | chr5.2:25585618-25585637 | None:intergenic | 40.0% | |
GTATGCATAAACGTACCTGA+AGG | + | chr5.2:25585645-25585664 | None:intergenic | 40.0% | |
GTGAAAGGAAGTGAATTTGG+AGG | - | chr5.2:25586643-25586662 | MS.gene68334:intron | 40.0% | |
GTTGAAGATGCTAAGGTGAA+AGG | - | chr5.2:25586628-25586647 | MS.gene68334:intron | 40.0% | |
TAGATGGAAGAAAGGGAAGA+GGG | + | chr5.2:25585545-25585564 | None:intergenic | 40.0% | |
TCCATTGAAGTAGTCACATG+TGG | + | chr5.2:25585807-25585826 | None:intergenic | 40.0% | |
TCCTTCTCCCTACTTCTATA+AGG | + | chr5.2:25586562-25586581 | None:intergenic | 40.0% | |
TGAAAGATGGGCAAAGGATA+TGG | - | chr5.2:25586255-25586274 | MS.gene68334:CDS | 40.0% | |
TGAGATCATGAAGAAATGGG+AGG | - | chr5.2:25586840-25586859 | MS.gene68334:CDS | 40.0% | |
TTCCAAGTATCTATAGGTCC+AGG | + | chr5.2:25586808-25586827 | None:intergenic | 40.0% | |
! | AAAAGAAGGAGGTGTAGAGT+GGG | + | chr5.2:25585607-25585626 | None:intergenic | 40.0% |
! | AAAGGGTACATATAAGGACC+TGG | + | chr5.2:25586727-25586746 | None:intergenic | 40.0% |
! | AAAGTGTTAGGCTCAAACCT+TGG | + | chr5.2:25585971-25585990 | None:intergenic | 40.0% |
! | AGAAGAGCATAAAGAGTCCA+AGG | + | chr5.2:25585492-25585511 | None:intergenic | 40.0% |
! | CCTGAACTTGTTTACACAAG+TGG | - | chr5.2:25586091-25586110 | MS.gene68334:CDS | 40.0% |
! | TAAAAGAAGGAGGTGTAGAG+TGG | + | chr5.2:25585608-25585627 | None:intergenic | 40.0% |
! | TGTTGATGAAAGATGGGCAA+AGG | - | chr5.2:25586249-25586268 | MS.gene68334:CDS | 40.0% |
!! | CAGCTCATTTTGAAGGAGAA+TGG | - | chr5.2:25586506-25586525 | MS.gene68334:intron | 40.0% |
!! | CCCTTTTCCATTTGCTAATG+GGG | - | chr5.2:25586741-25586760 | MS.gene68334:CDS | 40.0% |
!! | TTGTTGGTGATTCTATGGCT+AGG | - | chr5.2:25586023-25586042 | MS.gene68334:CDS | 40.0% |
!!! | GGCTTTTGTTGGTGATTCTA+TGG | - | chr5.2:25586018-25586037 | MS.gene68334:CDS | 40.0% |
AGTAGGGAGAAGGAACTTGA+AGG | - | chr5.2:25586568-25586587 | MS.gene68334:intron | 45.0% | |
ATAAACGTACCTGAAGGAGG+GGG | + | chr5.2:25585639-25585658 | None:intergenic | 45.0% | |
ATTTGGAGGGGTTAGGTTTG+AGG | - | chr5.2:25586657-25586676 | MS.gene68334:CDS | 45.0% | |
CATAAACGTACCTGAAGGAG+GGG | + | chr5.2:25585640-25585659 | None:intergenic | 45.0% | |
CCCACATGTGACTACTTCAA+TGG | - | chr5.2:25585803-25585822 | MS.gene68334:CDS | 45.0% | |
GAAGGAGAATGGGATAAAGC+TGG | - | chr5.2:25586517-25586536 | MS.gene68334:intron | 45.0% | |
GAAGTGAATTTGGAGGGGTT+AGG | - | chr5.2:25586650-25586669 | MS.gene68334:intron | 45.0% | |
GATGGGCAAAGGATATGGAA+AGG | - | chr5.2:25586260-25586279 | MS.gene68334:CDS | 45.0% | |
GCATAAACGTACCTGAAGGA+GGG | + | chr5.2:25585641-25585660 | None:intergenic | 45.0% | |
GCATCCTGCAGTTTACTATG+AGG | - | chr5.2:25586321-25586340 | MS.gene68334:CDS | 45.0% | |
GCCTTATAGAAGTAGGGAGA+AGG | - | chr5.2:25586558-25586577 | MS.gene68334:intron | 45.0% | |
GGAAGCTCAGATTCAGTAGA+TGG | + | chr5.2:25585561-25585580 | None:intergenic | 45.0% | |
GGAGAAGGAACTTGAAGGAA+TGG | - | chr5.2:25586573-25586592 | MS.gene68334:intron | 45.0% | |
GGCAAAGGATATGGAAAGGA+TGG | - | chr5.2:25586264-25586283 | MS.gene68334:CDS | 45.0% | |
GTAGATGGAAGAAAGGGAAG+AGG | + | chr5.2:25585546-25585565 | None:intergenic | 45.0% | |
TCACCCTCATAGTAAACTGC+AGG | + | chr5.2:25586328-25586347 | None:intergenic | 45.0% | |
TGCATAAACGTACCTGAAGG+AGG | + | chr5.2:25585642-25585661 | None:intergenic | 45.0% | |
TGCCTGGACCTATAGATACT+TGG | - | chr5.2:25586803-25586822 | MS.gene68334:CDS | 45.0% | |
TTGGCATTGTTGAGACCAGA+TGG | - | chr5.2:25586697-25586716 | MS.gene68334:CDS | 45.0% | |
! | CAATCATTTTGCACACGCTC+TGG | + | chr5.2:25586769-25586788 | None:intergenic | 45.0% |
! | GGGGGTGTAGAAGTAAAAGA+AGG | + | chr5.2:25585621-25585640 | None:intergenic | 45.0% |
! | TCTGGAACCCCATTAGCAAA+TGG | + | chr5.2:25586751-25586770 | None:intergenic | 45.0% |
! | TGGTCCCCTTTTCTTGTTCA+AGG | - | chr5.2:25586175-25586194 | MS.gene68334:CDS | 45.0% |
! | TGTGTTCATTGGTGTTTGCC+TGG | - | chr5.2:25586787-25586806 | MS.gene68334:CDS | 45.0% |
AGGTGTAGAGTGGGAGATGA+TGG | + | chr5.2:25585598-25585617 | None:intergenic | 50.0% | |
TAAGGACCTGGATGACCATC+TGG | + | chr5.2:25586715-25586734 | None:intergenic | 50.0% | |
TTGAGACCAGATGGTCATCC+AGG | - | chr5.2:25586706-25586725 | MS.gene68334:CDS | 50.0% | |
ACTTCTACACCCCCTCCTTC+AGG | - | chr5.2:25585627-25585646 | MS.gene68334:CDS | 55.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr5.2 | gene | 25585420 | 25586879 | 25585420 | ID=MS.gene68334 |
chr5.2 | mRNA | 25585420 | 25586879 | 25585420 | ID=MS.gene68334.t1;Parent=MS.gene68334 |
chr5.2 | exon | 25586651 | 25586879 | 25586651 | ID=MS.gene68334.t1.exon1;Parent=MS.gene68334.t1 |
chr5.2 | CDS | 25586651 | 25586879 | 25586651 | ID=cds.MS.gene68334.t1;Parent=MS.gene68334.t1 |
chr5.2 | exon | 25585420 | 25586519 | 25585420 | ID=MS.gene68334.t1.exon2;Parent=MS.gene68334.t1 |
chr5.2 | CDS | 25585420 | 25586519 | 25585420 | ID=cds.MS.gene68334.t1;Parent=MS.gene68334.t1 |
Gene Sequence |
Protein sequence |