Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68340.t1 | XP_003613292.1 | 95 | 221 | 11 | 0 | 1 | 221 | 83 | 303 | 6.00E-103 | 383.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68340.t1 | Q94JU2 | 46.7 | 214 | 109 | 2 | 9 | 221 | 95 | 304 | 8.9e-47 | 188.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68340.t1 | G7K2S5 | 95.0 | 221 | 11 | 0 | 1 | 221 | 83 | 303 | 4.3e-103 | 383.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene051064 | MS.gene68340 | 0.812767 | 3.59E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Find 39 sgRNAs with CRISPR-Local
Find 330 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GGGAAATCAGATTGGATAAT+TGG | 0.197562 | 5.2:+25533359 | MS.gene68340:CDS |
| TCCAATCTGATTTCCCTAAA+AGG | 0.218236 | 5.2:-25533352 | None:intergenic |
| AGTGCAATGACCACTCTTAA+AGG | 0.236929 | 5.2:-25534280 | None:intergenic |
| GTGTTTATCACTAGCTCTTC+TGG | 0.247926 | 5.2:-25533825 | None:intergenic |
| ACTCATATGTTAATGACTTC+TGG | 0.288657 | 5.2:+25529975 | MS.gene68340:CDS |
| GGCACAGTGGTCTCTATTGC+AGG | 0.308068 | 5.2:+25533245 | MS.gene68340:CDS |
| AGCAGCCAGGCAAAAGTTAT+TGG | 0.314638 | 5.2:+25533224 | MS.gene68340:CDS |
| TTCTCTTCTGTTTATTGTCC+AGG | 0.332403 | 5.2:+25533415 | MS.gene68340:CDS |
| TTGAACATAGCTACATATAT+TGG | 0.334507 | 5.2:-25534256 | None:intergenic |
| TCATACTTGCTATAATTTCA+AGG | 0.384041 | 5.2:+25530060 | MS.gene68340:CDS |
| TTGGGAGACAATCTTTATCT+TGG | 0.387204 | 5.2:+25534322 | MS.gene68340:CDS |
| ACAGATAGCAACTGTTTATC+AGG | 0.412768 | 5.2:-25533930 | None:intergenic |
| ATATACAGACTTGGATTGTC+AGG | 0.424821 | 5.2:+25533796 | MS.gene68340:intron |
| CAGAGGGAAATTCAAATGCT+TGG | 0.454003 | 5.2:+25533898 | MS.gene68340:CDS |
| TTATTGGCATCATTAATCAA+TGG | 0.483388 | 5.2:-25533299 | None:intergenic |
| TACCACAAAACAGCAACAAA+TGG | 0.500109 | 5.2:-25533847 | None:intergenic |
| GCAAGTATGAAGGTGAAAGC+AGG | 0.505783 | 5.2:-25530047 | None:intergenic |
| AGTGGTCATTGCACTTAGCA+TGG | 0.527230 | 5.2:+25534288 | MS.gene68340:CDS |
| TGAAATTATAGCAAGTATGA+AGG | 0.531313 | 5.2:-25530057 | None:intergenic |
| AATATAGAAATGGGAGCAAG+TGG | 0.531385 | 5.2:+25533323 | MS.gene68340:CDS |
| GAGACAATCTTTATCTTGGA+AGG | 0.532255 | 5.2:+25534326 | MS.gene68340:CDS |
| GTGGTCATTGCACTTAGCAT+GGG | 0.547313 | 5.2:+25534289 | MS.gene68340:CDS |
| CTCTGCAATGAGAGCTACAA+TGG | 0.554415 | 5.2:-25533880 | None:intergenic |
| GCACAGTGGTCTCTATTGCA+GGG | 0.571242 | 5.2:+25533246 | MS.gene68340:CDS |
| ACATGGGCATGTCATAAGAA+AGG | 0.572940 | 5.2:+25534232 | MS.gene68340:CDS |
| CACAGTGGTCTCTATTGCAG+GGG | 0.584216 | 5.2:+25533247 | MS.gene68340:CDS |
| TATACAGACTTGGATTGTCA+GGG | 0.590593 | 5.2:+25533797 | MS.gene68340:intron |
| TGGTCATTGCACTTAGCATG+GGG | 0.592040 | 5.2:+25534290 | MS.gene68340:CDS |
| TATGTTCAAACCTTTAAGAG+TGG | 0.597273 | 5.2:+25534270 | MS.gene68340:CDS |
| ATTGTAGCTCTCATTGCAGA+GGG | 0.608307 | 5.2:+25533882 | MS.gene68340:CDS |
| TAAATTCAGTTCTCCCACGT+TGG | 0.619926 | 5.2:+25530001 | MS.gene68340:CDS |
| CAAGTATGAAGGTGAAAGCA+GGG | 0.622957 | 5.2:-25530046 | None:intergenic |
| TGAAGAATGTTATACACACA+TGG | 0.625464 | 5.2:+25534215 | MS.gene68340:CDS |
| CATTGTAGCTCTCATTGCAG+AGG | 0.632723 | 5.2:+25533881 | MS.gene68340:CDS |
| AACAATAGCTGAAGCCAACG+TGG | 0.634527 | 5.2:-25530015 | None:intergenic |
| GAAGAATGTTATACACACAT+GGG | 0.649829 | 5.2:+25534216 | MS.gene68340:CDS |
| GGTCATTGCACTTAGCATGG+GGG | 0.701257 | 5.2:+25534291 | MS.gene68340:CDS |
| ACAATAGCTGAAGCCAACGT+GGG | 0.701649 | 5.2:-25530014 | None:intergenic |
| GGCAAAAGTTATTGGCACAG+TGG | 0.705210 | 5.2:+25533232 | MS.gene68340:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAAAATTAACATAATG+AGG | - | chr5.2:25532690-25532709 | None:intergenic | 10.0% |
| !!! | TATTTTTTTAAATAATAGAG+TGG | + | chr5.2:25530720-25530739 | MS.gene68340:intron | 10.0% |
| !! | AACTTCAAAAATATCAATAA+TGG | - | chr5.2:25531427-25531446 | None:intergenic | 15.0% |
| !! | AATATCATCTATAATTGAAT+CGG | - | chr5.2:25532395-25532414 | None:intergenic | 15.0% |
| !! | ATAATATGATCTATTTATAG+TGG | - | chr5.2:25530703-25530722 | None:intergenic | 15.0% |
| !! | ATATGTAATTGTAGTATTAA+AGG | - | chr5.2:25533013-25533032 | None:intergenic | 15.0% |
| !! | ATCATATGTTTCATATAATA+GGG | + | chr5.2:25530648-25530667 | MS.gene68340:intron | 15.0% |
| !! | ATTCCAATTAATCAAATTTA+AGG | + | chr5.2:25530347-25530366 | MS.gene68340:intron | 15.0% |
| !! | TAAGGCATATTTAATTAAAT+AGG | + | chr5.2:25531325-25531344 | MS.gene68340:intron | 15.0% |
| !! | TAATATGATCTATTTATAGT+GGG | - | chr5.2:25530702-25530721 | None:intergenic | 15.0% |
| !! | TTATATATGAAAAGCTTAAT+AGG | - | chr5.2:25531396-25531415 | None:intergenic | 15.0% |
| !!! | AAAAGTTATTGTAGTTTTTA+AGG | + | chr5.2:25530373-25530392 | MS.gene68340:intron | 15.0% |
| !!! | CATAAAATAGGTTTTTAAAT+AGG | + | chr5.2:25531782-25531801 | MS.gene68340:intron | 15.0% |
| !!! | TGAATTATTATTATTTTGGT+GGG | + | chr5.2:25530324-25530343 | MS.gene68340:intron | 15.0% |
| !!! | TGACTGAATTATTATTATTT+TGG | + | chr5.2:25530320-25530339 | MS.gene68340:intron | 15.0% |
| !!! | TTGTTTCTTGATAATTTTAT+TGG | + | chr5.2:25530503-25530522 | MS.gene68340:intron | 15.0% |
| !! | AATAAACTTATATAAGTCTG+AGG | + | chr5.2:25532100-25532119 | MS.gene68340:intron | 20.0% |
| !! | ACAAAGAACTAAAAATTGTA+AGG | + | chr5.2:25532771-25532790 | MS.gene68340:intron | 20.0% |
| !! | ACATCAAAAACCTTTATATT+CGG | - | chr5.2:25533617-25533636 | None:intergenic | 20.0% |
| !! | ATAATTTCAAGGTATGTTTA+TGG | + | chr5.2:25530071-25530090 | MS.gene68340:intron | 20.0% |
| !! | ATCCTTGATAAAAGAAAAAA+CGG | - | chr5.2:25532252-25532271 | None:intergenic | 20.0% |
| !! | GATCATATGTTTCATATAAT+AGG | + | chr5.2:25530647-25530666 | MS.gene68340:intron | 20.0% |
| !! | GCCAATAAAAATATAGAAAT+GGG | + | chr5.2:25533314-25533333 | MS.gene68340:CDS | 20.0% |
| !! | TAAATAATGAATTCTTACGA+AGG | - | chr5.2:25531517-25531536 | None:intergenic | 20.0% |
| !! | TAAATACTCAGTATATATGA+AGG | - | chr5.2:25532365-25532384 | None:intergenic | 20.0% |
| !! | TCTCCTTAAATTTGATTAAT+TGG | - | chr5.2:25530353-25530372 | None:intergenic | 20.0% |
| !! | TGCCAATAAAAATATAGAAA+TGG | + | chr5.2:25533313-25533332 | MS.gene68340:CDS | 20.0% |
| !! | TTAAAAACAAGGGTTTAAAA+AGG | + | chr5.2:25532876-25532895 | MS.gene68340:intron | 20.0% |
| !! | TTTATAATATCTGACATGAT+AGG | + | chr5.2:25530604-25530623 | MS.gene68340:intron | 20.0% |
| !!! | AACCTTGTTTTTTAAAAACA+AGG | + | chr5.2:25532865-25532884 | MS.gene68340:intron | 20.0% |
| !!! | AATTGTAGCTGTTTAAATTT+TGG | + | chr5.2:25534127-25534146 | MS.gene68340:intron | 20.0% |
| !!! | ACAAGGTTTAATAACATTTT+TGG | - | chr5.2:25532853-25532872 | None:intergenic | 20.0% |
| !!! | ACCTTGTTTTTTAAAAACAA+GGG | + | chr5.2:25532866-25532885 | MS.gene68340:intron | 20.0% |
| !!! | ATTTGGCTATTTTTTTGTTT+TGG | - | chr5.2:25532626-25532645 | None:intergenic | 20.0% |
| !!! | CATAAAATAGGCTTTTAAAT+AGG | + | chr5.2:25531620-25531639 | MS.gene68340:intron | 20.0% |
| !!! | CATACATCTCTTTTTTAATT+CGG | + | chr5.2:25530534-25530553 | MS.gene68340:intron | 20.0% |
| !!! | CTGAATTATTATTATTTTGG+TGG | + | chr5.2:25530323-25530342 | MS.gene68340:intron | 20.0% |
| !!! | TAAAAACCTATTTTATGCTA+AGG | - | chr5.2:25531779-25531798 | None:intergenic | 20.0% |
| !!! | TAATATATAGTTTGTTTACC+TGG | - | chr5.2:25533436-25533455 | None:intergenic | 20.0% |
| !!! | TAGTAATGAAATTTTGAAAG+TGG | - | chr5.2:25533105-25533124 | None:intergenic | 20.0% |
| !!! | TAGTTGTGACATTTTATAAA+GGG | + | chr5.2:25533273-25533292 | MS.gene68340:CDS | 20.0% |
| !!! | TATTTTTTCTTGTATTTGCA+AGG | - | chr5.2:25533143-25533162 | None:intergenic | 20.0% |
| !!! | TCCCATTTCTATATTTTTAT+TGG | - | chr5.2:25533318-25533337 | None:intergenic | 20.0% |
| !!! | TTAGTCTTAGTTTAGTTATT+TGG | - | chr5.2:25532643-25532662 | None:intergenic | 20.0% |
| !!! | TTAGTTGTGACATTTTATAA+AGG | + | chr5.2:25533272-25533291 | MS.gene68340:CDS | 20.0% |
| !!! | TTGATAATTTTATTGGTTGT+GGG | + | chr5.2:25530510-25530529 | MS.gene68340:intron | 20.0% |
| ! | AAATAGGCCAAAACTTATTA+AGG | - | chr5.2:25531567-25531586 | None:intergenic | 25.0% |
| ! | ACATGCTTTATCATATCAAT+AGG | + | chr5.2:25533743-25533762 | MS.gene68340:intron | 25.0% |
| ! | ACCACCAATATGAATAAATA+TGG | - | chr5.2:25531135-25531154 | None:intergenic | 25.0% |
| ! | ACTATATCTCTTTCATAGAT+AGG | + | chr5.2:25530420-25530439 | MS.gene68340:intron | 25.0% |
| ! | ATATAAACCTACTCCTAAAT+AGG | - | chr5.2:25531583-25531602 | None:intergenic | 25.0% |
| ! | ATCCCCATATTTATTCATAT+TGG | + | chr5.2:25531128-25531147 | MS.gene68340:intron | 25.0% |
| ! | ATGAATAAATATGGGGATAA+CGG | - | chr5.2:25531126-25531145 | None:intergenic | 25.0% |
| ! | ATGCTTTATCATATCAATAG+GGG | + | chr5.2:25533745-25533764 | MS.gene68340:intron | 25.0% |
| ! | CACCAATATGAATAAATATG+GGG | - | chr5.2:25531133-25531152 | None:intergenic | 25.0% |
| ! | CATATTTAATTAAATAGGCC+AGG | + | chr5.2:25531330-25531349 | MS.gene68340:intron | 25.0% |
| ! | CATGCTTTATCATATCAATA+GGG | + | chr5.2:25533744-25533763 | MS.gene68340:intron | 25.0% |
| ! | CCACCAATATGAATAAATAT+GGG | - | chr5.2:25531134-25531153 | None:intergenic | 25.0% |
| ! | CTAAATAACCAATCATATGA+AGG | - | chr5.2:25531469-25531488 | None:intergenic | 25.0% |
| ! | TGAAATTATAGCAAGTATGA+AGG | - | chr5.2:25530060-25530079 | None:intergenic | 25.0% |
| ! | TGTGGATATTCATTTAATCA+TGG | + | chr5.2:25534153-25534172 | MS.gene68340:intron | 25.0% |
| ! | TGTTTATGGTTGAAATTACA+AGG | + | chr5.2:25530085-25530104 | MS.gene68340:intron | 25.0% |
| ! | TTATTGGCATCATTAATCAA+TGG | - | chr5.2:25533302-25533321 | None:intergenic | 25.0% |
| ! | TTGAACATAGCTACATATAT+TGG | - | chr5.2:25534259-25534278 | None:intergenic | 25.0% |
| ! | TTTCAAGATTGATATTAGCA+AGG | + | chr5.2:25530927-25530946 | MS.gene68340:intron | 25.0% |
| !! | CACTATTCTTAAAACTTTTG+AGG | + | chr5.2:25532061-25532080 | MS.gene68340:intron | 25.0% |
| !! | CATATGATTGGTTATTTAGT+AGG | + | chr5.2:25531470-25531489 | MS.gene68340:intron | 25.0% |
| !! | GATAAAGCTTGAATACTTTT+GGG | + | chr5.2:25532986-25533005 | MS.gene68340:intron | 25.0% |
| !! | TAAAAGCCTATTTTATGCTA+AGG | - | chr5.2:25531617-25531636 | None:intergenic | 25.0% |
| !! | TGATAAAGCTTGAATACTTT+TGG | + | chr5.2:25532985-25533004 | MS.gene68340:intron | 25.0% |
| !!! | ACCCTTGTTTTTAAAAAACA+AGG | - | chr5.2:25532870-25532889 | None:intergenic | 25.0% |
| !!! | AGTTCAATTTAGTTCTGATT+TGG | - | chr5.2:25532590-25532609 | None:intergenic | 25.0% |
| !!! | CTGTTTAAATTTTGGTTTTG+TGG | + | chr5.2:25534135-25534154 | MS.gene68340:intron | 25.0% |
| !!! | CTTGATAATTTTATTGGTTG+TGG | + | chr5.2:25530509-25530528 | MS.gene68340:intron | 25.0% |
| !!! | GATATTTTTGAAAATCACCT+TGG | - | chr5.2:25532960-25532979 | None:intergenic | 25.0% |
| !!! | TAATAAGTTTTGGCCTATTT+AGG | + | chr5.2:25531567-25531586 | MS.gene68340:intron | 25.0% |
| !!! | TCATACTTGCTATAATTTCA+AGG | + | chr5.2:25530060-25530079 | MS.gene68340:CDS | 25.0% |
| !!! | TTACAAGGTTTGTTGTTTTT+TGG | + | chr5.2:25530100-25530119 | MS.gene68340:intron | 25.0% |
| AAGACTAACGATAAATCAGA+AGG | + | chr5.2:25532655-25532674 | MS.gene68340:intron | 30.0% | |
| ACTCATATGTTAATGACTTC+TGG | + | chr5.2:25529975-25529994 | MS.gene68340:CDS | 30.0% | |
| AGCTGCCTATAAATGATTAA+AGG | - | chr5.2:25534182-25534201 | None:intergenic | 30.0% | |
| ATAAAATGCCCCAAAGAATT+TGG | + | chr5.2:25532466-25532485 | MS.gene68340:intron | 30.0% | |
| ATATGAAAAGCTTAATAGGC+CGG | - | chr5.2:25531392-25531411 | None:intergenic | 30.0% | |
| ATCAATTGTAACATCCAAGA+AGG | + | chr5.2:25532918-25532937 | MS.gene68340:intron | 30.0% | |
| ATTTGTTTGCAAACAACAGA+TGG | - | chr5.2:25531995-25532014 | None:intergenic | 30.0% | |
| CAAACATATTTGTGTGCTTT+AGG | + | chr5.2:25531541-25531560 | MS.gene68340:intron | 30.0% | |
| CAAGTCTGTATATACATAGA+TGG | - | chr5.2:25533789-25533808 | None:intergenic | 30.0% | |
| CATCTATGTATATACAGACT+TGG | + | chr5.2:25533787-25533806 | MS.gene68340:intron | 30.0% | |
| CCCATATTTATTCATATTGG+TGG | + | chr5.2:25531131-25531150 | MS.gene68340:intron | 30.0% | |
| GAAGAATGTTATACACACAT+GGG | + | chr5.2:25534216-25534235 | MS.gene68340:CDS | 30.0% | |
| TAGAAGTCAACTAACTAAGA+TGG | - | chr5.2:25530575-25530594 | None:intergenic | 30.0% | |
| TGAAGAATGTTATACACACA+TGG | + | chr5.2:25534215-25534234 | MS.gene68340:CDS | 30.0% | |
| TGAATAAATATGGGGATAAC+GGG | - | chr5.2:25531125-25531144 | None:intergenic | 30.0% | |
| TTATCTCTACCAATCATTGA+AGG | - | chr5.2:25532224-25532243 | None:intergenic | 30.0% | |
| TTGATAGAGGTGATATTCAT+GGG | + | chr5.2:25531187-25531206 | MS.gene68340:intron | 30.0% | |
| TTTGGTTAAATGTGTGTTAG+AGG | + | chr5.2:25530795-25530814 | MS.gene68340:intron | 30.0% | |
| TTTGTTTGCAAACAACAGAT+GGG | - | chr5.2:25531994-25532013 | None:intergenic | 30.0% | |
| ! | AGAAGATGATCAATGTGTTT+TGG | + | chr5.2:25532416-25532435 | MS.gene68340:intron | 30.0% |
| ! | AGGTTTTTAAATAGGCTTTC+AGG | + | chr5.2:25531790-25531809 | MS.gene68340:intron | 30.0% |
| ! | CAAGTGGAATTTTCCTTTTA+GGG | + | chr5.2:25533339-25533358 | MS.gene68340:CDS | 30.0% |
| ! | CACAACGTGTAATTTAGAAT+CGG | + | chr5.2:25533718-25533737 | MS.gene68340:intron | 30.0% |
| ! | CTTTAGGCCTTAATAAGTTT+TGG | + | chr5.2:25531557-25531576 | MS.gene68340:intron | 30.0% |
| ! | CTTTTATCAAGGATTGTATC+TGG | + | chr5.2:25532258-25532277 | MS.gene68340:intron | 30.0% |
| ! | TATGTTCAAACCTTTAAGAG+TGG | + | chr5.2:25534270-25534289 | MS.gene68340:CDS | 30.0% |
| ! | TTATTCATATTGGTGGTTGA+GGG | + | chr5.2:25531138-25531157 | MS.gene68340:intron | 30.0% |
| ! | TTTATTCATATTGGTGGTTG+AGG | + | chr5.2:25531137-25531156 | MS.gene68340:intron | 30.0% |
| ! | TTTTCAGTCGTAATATGAGT+GGG | + | chr5.2:25532126-25532145 | MS.gene68340:intron | 30.0% |
| !! | TAGTTCTGATTTGGATATGT+GGG | - | chr5.2:25532581-25532600 | None:intergenic | 30.0% |
| !! | TGTTAGTTCTGCTACTTATT+CGG | + | chr5.2:25531038-25531057 | MS.gene68340:intron | 30.0% |
| !! | TTAGTTCTGATTTGGATATG+TGG | - | chr5.2:25532582-25532601 | None:intergenic | 30.0% |
| !! | TTTTTCAGTCGTAATATGAG+TGG | + | chr5.2:25532125-25532144 | MS.gene68340:intron | 30.0% |
| !!! | CAAATGTTTCTTGTTTTGCA+TGG | + | chr5.2:25532010-25532029 | MS.gene68340:intron | 30.0% |
| !!! | CTTTTGATATAGTGGATTTG+GGG | + | chr5.2:25530950-25530969 | MS.gene68340:intron | 30.0% |
| !!! | GCTTTTGATATAGTGGATTT+GGG | + | chr5.2:25530949-25530968 | MS.gene68340:intron | 30.0% |
| !!! | GTCCGTTTTTTCTTTTATCA+AGG | + | chr5.2:25532247-25532266 | MS.gene68340:intron | 30.0% |
| AAAAAGCCTATTAAGCCCAT+CGG | + | chr5.2:25531365-25531384 | MS.gene68340:intron | 35.0% | |
| AACACAAGCCTTCATATGAT+TGG | + | chr5.2:25531458-25531477 | MS.gene68340:intron | 35.0% | |
| AAGAGAACCACAAGTAAATG+TGG | + | chr5.2:25533503-25533522 | MS.gene68340:intron | 35.0% | |
| AATATAGAAATGGGAGCAAG+TGG | + | chr5.2:25533323-25533342 | MS.gene68340:CDS | 35.0% | |
| ACAGATAGCAACTGTTTATC+AGG | - | chr5.2:25533933-25533952 | None:intergenic | 35.0% | |
| AGTGGATCATATGTGTAAGA+TGG | + | chr5.2:25530738-25530757 | MS.gene68340:intron | 35.0% | |
| ATATACAGACTTGGATTGTC+AGG | + | chr5.2:25533796-25533815 | MS.gene68340:intron | 35.0% | |
| ATATTCATGGGGTACAAGTA+GGG | + | chr5.2:25531199-25531218 | MS.gene68340:intron | 35.0% | |
| CAAAATCGTAGTTGCAATTG+CGG | + | chr5.2:25533591-25533610 | MS.gene68340:intron | 35.0% | |
| CAATGATTGGTAGAGATAAG+AGG | + | chr5.2:25532225-25532244 | MS.gene68340:intron | 35.0% | |
| CATATGAAGGCTTGTGTTTA+TGG | - | chr5.2:25531456-25531475 | None:intergenic | 35.0% | |
| CCTTATAAAAAGCTTGAGTC+TGG | - | chr5.2:25531310-25531329 | None:intergenic | 35.0% | |
| GACCATAATTAAATCCGCAT+CGG | - | chr5.2:25533529-25533548 | None:intergenic | 35.0% | |
| GCTTATGAACTTTGATAAGG+TGG | + | chr5.2:25531062-25531081 | MS.gene68340:intron | 35.0% | |
| GGCTGCCTTTAATCATTTAT+AGG | + | chr5.2:25534174-25534193 | MS.gene68340:intron | 35.0% | |
| GGGAAATCAGATTGGATAAT+TGG | + | chr5.2:25533359-25533378 | MS.gene68340:CDS | 35.0% | |
| GGTGCTTATGAACTTTGATA+AGG | + | chr5.2:25531059-25531078 | MS.gene68340:intron | 35.0% | |
| TAATTAAATAGGCCAGGCTA+AGG | + | chr5.2:25531336-25531355 | MS.gene68340:intron | 35.0% | |
| TACCACAAAACAGCAACAAA+TGG | - | chr5.2:25533850-25533869 | None:intergenic | 35.0% | |
| TATACAGACTTGGATTGTCA+GGG | + | chr5.2:25533797-25533816 | MS.gene68340:intron | 35.0% | |
| TATCACAATAGCTGTTGCAT+TGG | + | chr5.2:25533648-25533667 | MS.gene68340:intron | 35.0% | |
| TCCAATCTGATTTCCCTAAA+AGG | - | chr5.2:25533355-25533374 | None:intergenic | 35.0% | |
| TCCAGACCTTAGCATAAAAT+AGG | + | chr5.2:25531608-25531627 | MS.gene68340:intron | 35.0% | |
| TCTAGTATCAAACACCTTCT+TGG | - | chr5.2:25532935-25532954 | None:intergenic | 35.0% | |
| TGAATGTTGCCACAATACAA+TGG | + | chr5.2:25533682-25533701 | MS.gene68340:intron | 35.0% | |
| TGATAGAGGTGATATTCATG+GGG | + | chr5.2:25531188-25531207 | MS.gene68340:intron | 35.0% | |
| TTCTCTTCTGTTTATTGTCC+AGG | + | chr5.2:25533415-25533434 | MS.gene68340:CDS | 35.0% | |
| TTGGGAGACAATCTTTATCT+TGG | + | chr5.2:25534322-25534341 | MS.gene68340:CDS | 35.0% | |
| TTGGGATTACCTTCAATGAT+TGG | + | chr5.2:25532212-25532231 | MS.gene68340:intron | 35.0% | |
| TTTCAGTCGTAATATGAGTG+GGG | + | chr5.2:25532127-25532146 | MS.gene68340:intron | 35.0% | |
| ! | ACCTATTTTATGCTAAGGTC+TGG | - | chr5.2:25531774-25531793 | None:intergenic | 35.0% |
| ! | AGCATGGGGGTTATATTTTT+GGG | + | chr5.2:25534304-25534323 | MS.gene68340:CDS | 35.0% |
| ! | AGGCTTTTAAATAGGCTTTC+AGG | + | chr5.2:25531628-25531647 | MS.gene68340:intron | 35.0% |
| ! | ATACTGTGATGTGCATTTTC+AGG | + | chr5.2:25533174-25533193 | MS.gene68340:intron | 35.0% |
| ! | CCAGACTCAAGCTTTTTATA+AGG | + | chr5.2:25531307-25531326 | MS.gene68340:intron | 35.0% |
| ! | CTTAGTTAGTTGACTTCTAC+TGG | + | chr5.2:25530576-25530595 | MS.gene68340:intron | 35.0% |
| ! | GAAAGTGGACATTTTGTTAC+CGG | - | chr5.2:25533090-25533109 | None:intergenic | 35.0% |
| ! | GCAAGTGGAATTTTCCTTTT+AGG | + | chr5.2:25533338-25533357 | MS.gene68340:CDS | 35.0% |
| ! | GTCTTGTTAATAAACGAGCT+GGG | - | chr5.2:25531288-25531307 | None:intergenic | 35.0% |
| ! | GTTGATAGAGGTGATATTCA+TGG | + | chr5.2:25531186-25531205 | MS.gene68340:intron | 35.0% |
| ! | TACTGACCTGACCTTTTTAA+AGG | - | chr5.2:25531664-25531683 | None:intergenic | 35.0% |
| ! | TAGCAAGGCTTTTGATATAG+TGG | + | chr5.2:25530942-25530961 | MS.gene68340:intron | 35.0% |
| ! | TAGCATGGGGGTTATATTTT+TGG | + | chr5.2:25534303-25534322 | MS.gene68340:CDS | 35.0% |
| ! | TCATTTATAGGCAGCTTTTG+TGG | + | chr5.2:25534186-25534205 | MS.gene68340:intron | 35.0% |
| !! | AGATGATCAATGTGTTTTGG+TGG | + | chr5.2:25532419-25532438 | MS.gene68340:intron | 35.0% |
| !! | AGTTCTGATTTGGATATGTG+GGG | - | chr5.2:25532580-25532599 | None:intergenic | 35.0% |
| !! | ATGGGTACTGGAAAGTATTT+GGG | + | chr5.2:25532194-25532213 | MS.gene68340:intron | 35.0% |
| !! | TCCTTTTAGGGAAATCAGAT+TGG | + | chr5.2:25533351-25533370 | MS.gene68340:CDS | 35.0% |
| !!! | ATGATCAATGTGTTTTGGTG+GGG | + | chr5.2:25532421-25532440 | MS.gene68340:intron | 35.0% |
| !!! | GATGATCAATGTGTTTTGGT+GGG | + | chr5.2:25532420-25532439 | MS.gene68340:intron | 35.0% |
| !!! | GGCTTTTGATATAGTGGATT+TGG | + | chr5.2:25530948-25530967 | MS.gene68340:intron | 35.0% |
| AAAAGCCTATTAAGCCCATC+GGG | + | chr5.2:25531366-25531385 | MS.gene68340:intron | 40.0% | |
| AAACGAATAAATGCGTGGAG+GGG | + | chr5.2:25532281-25532300 | MS.gene68340:intron | 40.0% | |
| AAATGCCCCAAAGAATTTGG+TGG | + | chr5.2:25532469-25532488 | MS.gene68340:intron | 40.0% | |
| AACTTACTTGTACCTAGAGG+TGG | - | chr5.2:25531953-25531972 | None:intergenic | 40.0% | |
| ACATGGGCATGTCATAAGAA+AGG | + | chr5.2:25534232-25534251 | MS.gene68340:CDS | 40.0% | |
| ACCCATTCCACCAAATTCTT+TGG | - | chr5.2:25532479-25532498 | None:intergenic | 40.0% | |
| AGAAAAGACAAGCTTCCTAC+CGG | - | chr5.2:25530454-25530473 | None:intergenic | 40.0% | |
| AGTGCAATGACCACTCTTAA+AGG | - | chr5.2:25534283-25534302 | None:intergenic | 40.0% | |
| ATTGTAGCTCTCATTGCAGA+GGG | + | chr5.2:25533882-25533901 | MS.gene68340:CDS | 40.0% | |
| CAAGTATGAAGGTGAAAGCA+GGG | - | chr5.2:25530049-25530068 | None:intergenic | 40.0% | |
| CAGAGGGAAATTCAAATGCT+TGG | + | chr5.2:25533898-25533917 | MS.gene68340:CDS | 40.0% | |
| CCATTCCACCAAATTCTTTG+GGG | - | chr5.2:25532477-25532496 | None:intergenic | 40.0% | |
| CCCATTCCACCAAATTCTTT+GGG | - | chr5.2:25532478-25532497 | None:intergenic | 40.0% | |
| CTATGACTCTGATTGTGATC+CGG | + | chr5.2:25533068-25533087 | MS.gene68340:intron | 40.0% | |
| CTCTAGGTACAAGTAAGTTG+CGG | + | chr5.2:25531954-25531973 | MS.gene68340:intron | 40.0% | |
| GAAACGAATAAATGCGTGGA+GGG | + | chr5.2:25532280-25532299 | MS.gene68340:intron | 40.0% | |
| GAGGATTTGTCACGCATTAT+TGG | + | chr5.2:25532158-25532177 | MS.gene68340:intron | 40.0% | |
| GATATTCATGGGGTACAAGT+AGG | + | chr5.2:25531198-25531217 | MS.gene68340:intron | 40.0% | |
| GCGGATTTAATTATGGTCGT+AGG | + | chr5.2:25533531-25533550 | MS.gene68340:intron | 40.0% | |
| GTGTTTGATACTAGAGACCA+AGG | + | chr5.2:25532940-25532959 | MS.gene68340:intron | 40.0% | |
| TAAATTCAGTTCTCCCACGT+TGG | + | chr5.2:25530001-25530020 | MS.gene68340:CDS | 40.0% | |
| TAACACACATCATCATCCAC+TGG | - | chr5.2:25531023-25531042 | None:intergenic | 40.0% | |
| TAATCGACTGAAACGGTGTT+TGG | + | chr5.2:25530777-25530796 | MS.gene68340:intron | 40.0% | |
| TATTCATGGGGTACAAGTAG+GGG | + | chr5.2:25531200-25531219 | MS.gene68340:intron | 40.0% | |
| TCATAGATAGGATACGTTCC+CGG | + | chr5.2:25530432-25530451 | MS.gene68340:intron | 40.0% | |
| TCTGGAAACGAATAAATGCG+TGG | + | chr5.2:25532276-25532295 | MS.gene68340:intron | 40.0% | |
| TGGCCTACTTCAAAAATGCT+AGG | - | chr5.2:25531890-25531909 | None:intergenic | 40.0% | |
| TGTTGCGAACCATTGTATTG+TGG | - | chr5.2:25533694-25533713 | None:intergenic | 40.0% | |
| TTGTACCTAGAGGTGGAAAT+GGG | - | chr5.2:25531946-25531965 | None:intergenic | 40.0% | |
| ! | ATCAGGCCTTTAAAAAGGTC+AGG | + | chr5.2:25531655-25531674 | MS.gene68340:intron | 40.0% |
| ! | ATTGGTGTCCAACATGTGAT+GGG | + | chr5.2:25532176-25532195 | MS.gene68340:intron | 40.0% |
| ! | CCCAAAGAATTTGGTGGAAT+GGG | + | chr5.2:25532475-25532494 | MS.gene68340:intron | 40.0% |
| ! | GCCTATTTTATGCTAAGGTC+TGG | - | chr5.2:25531612-25531631 | None:intergenic | 40.0% |
| ! | GCTTCATCAGGCCTTTAAAA+AGG | + | chr5.2:25531650-25531669 | MS.gene68340:intron | 40.0% |
| ! | GTGTTTATCACTAGCTCTTC+TGG | - | chr5.2:25533828-25533847 | None:intergenic | 40.0% |
| ! | TATGAAAAAGCATAGCAGCC+AGG | + | chr5.2:25533211-25533230 | MS.gene68340:CDS | 40.0% |
| ! | TATTGGTGTCCAACATGTGA+TGG | + | chr5.2:25532175-25532194 | MS.gene68340:intron | 40.0% |
| !! | GATGGGTACTGGAAAGTATT+TGG | + | chr5.2:25532193-25532212 | MS.gene68340:intron | 40.0% |
| !! | GGTCTTGTTAATAAACGAGC+TGG | - | chr5.2:25531289-25531308 | None:intergenic | 40.0% |
| !! | GTTTTGGCCTATTTAGGAGT+AGG | + | chr5.2:25531573-25531592 | MS.gene68340:intron | 40.0% |
| !! | TGTGATGTGCATTTTCAGGA+TGG | + | chr5.2:25533178-25533197 | MS.gene68340:intron | 40.0% |
| !!! | AAAACTTTTGAGGCAGCATC+TGG | + | chr5.2:25532071-25532090 | MS.gene68340:intron | 40.0% |
| !!! | AGGCCTAGCATTTTTGAAGT+AGG | + | chr5.2:25531884-25531903 | MS.gene68340:intron | 40.0% |
| !!! | CACCATTTGTTGCTGTTTTG+TGG | + | chr5.2:25533845-25533864 | MS.gene68340:CDS | 40.0% |
| !!! | CTTTTTTGAAAGCCTTAGCC+TGG | - | chr5.2:25531351-25531370 | None:intergenic | 40.0% |
| !!! | TAGCATTTTTGAAGTAGGCC+AGG | + | chr5.2:25531889-25531908 | MS.gene68340:intron | 40.0% |
| AACAATAGCTGAAGCCAACG+TGG | - | chr5.2:25530018-25530037 | None:intergenic | 45.0% | |
| ACAAGTAAATGTGGCCGATG+CGG | + | chr5.2:25533512-25533531 | MS.gene68340:intron | 45.0% | |
| ACAATAGCTGAAGCCAACGT+GGG | - | chr5.2:25530017-25530036 | None:intergenic | 45.0% | |
| ACGTGTTGTCCAGTATAGAG+TGG | - | chr5.2:25530843-25530862 | None:intergenic | 45.0% | |
| AGACAATCCACTCAACGAAG+AGG | + | chr5.2:25530875-25530894 | MS.gene68340:intron | 45.0% | |
| AGCAGCCAGGCAAAAGTTAT+TGG | + | chr5.2:25533224-25533243 | MS.gene68340:CDS | 45.0% | |
| AGTGGTCATTGCACTTAGCA+TGG | + | chr5.2:25534288-25534307 | MS.gene68340:CDS | 45.0% | |
| ATAGGCTTTCAGGCTTCATC+AGG | + | chr5.2:25531638-25531657 | MS.gene68340:intron | 45.0% | |
| CATGGTGTGCTTATGCGAAT+TGG | + | chr5.2:25530979-25530998 | MS.gene68340:intron | 45.0% | |
| CATTGTAGCTCTCATTGCAG+AGG | + | chr5.2:25533881-25533900 | MS.gene68340:CDS | 45.0% | |
| CCTCGAAAATGAGCCTATGA+CGG | + | chr5.2:25531845-25531864 | MS.gene68340:intron | 45.0% | |
| CCTCTCGACTCTAATACACA+AGG | + | chr5.2:25531161-25531180 | MS.gene68340:intron | 45.0% | |
| CCTTGTGTATTAGAGTCGAG+AGG | - | chr5.2:25531164-25531183 | None:intergenic | 45.0% | |
| CGCAACTTACTTGTACCTAG+AGG | - | chr5.2:25531956-25531975 | None:intergenic | 45.0% | |
| CTCGAAAATGAGCCTATGAC+GGG | + | chr5.2:25531846-25531865 | MS.gene68340:intron | 45.0% | |
| CTCGACTCTAATACACAAGG+CGG | + | chr5.2:25531164-25531183 | MS.gene68340:intron | 45.0% | |
| CTCTGCAATGAGAGCTACAA+TGG | - | chr5.2:25533883-25533902 | None:intergenic | 45.0% | |
| CTTGTACCTAGAGGTGGAAA+TGG | - | chr5.2:25531947-25531966 | None:intergenic | 45.0% | |
| CTTTAAATAGGCTAGGCCGT+AGG | - | chr5.2:25531255-25531274 | None:intergenic | 45.0% | |
| GAAAAGACAAGCTTCCTACC+GGG | - | chr5.2:25530453-25530472 | None:intergenic | 45.0% | |
| GAATTGGAGTCGGTGAGAAA+TGG | + | chr5.2:25530995-25531014 | MS.gene68340:intron | 45.0% | |
| GCAAGTATGAAGGTGAAAGC+AGG | - | chr5.2:25530050-25530069 | None:intergenic | 45.0% | |
| GCAATTGCGGCCGAATATAA+AGG | + | chr5.2:25533604-25533623 | MS.gene68340:intron | 45.0% | |
| GGAAACGAATAAATGCGTGG+AGG | + | chr5.2:25532279-25532298 | MS.gene68340:intron | 45.0% | |
| GGCAAAAGTTATTGGCACAG+TGG | + | chr5.2:25533232-25533251 | MS.gene68340:CDS | 45.0% | |
| GGCCGATGCGGATTTAATTA+TGG | + | chr5.2:25533524-25533543 | MS.gene68340:intron | 45.0% | |
| GTGCTTATGCGAATTGGAGT+CGG | + | chr5.2:25530985-25531004 | MS.gene68340:intron | 45.0% | |
| GTGGTCATTGCACTTAGCAT+GGG | + | chr5.2:25534289-25534308 | MS.gene68340:CDS | 45.0% | |
| TCAACGAAGAGGAAGTCGAA+GGG | + | chr5.2:25530886-25530905 | MS.gene68340:intron | 45.0% | |
| TGCTCGCTAATCGACTGAAA+CGG | + | chr5.2:25530770-25530789 | MS.gene68340:intron | 45.0% | |
| TGGTCATTGCACTTAGCATG+GGG | + | chr5.2:25534290-25534309 | MS.gene68340:CDS | 45.0% | |
| TGTTGAGGTCCACTCTATAC+TGG | + | chr5.2:25530831-25530850 | MS.gene68340:intron | 45.0% | |
| TTCCAGTACCCATCACATGT+TGG | - | chr5.2:25532187-25532206 | None:intergenic | 45.0% | |
| ! | AGCCTATTTAAAGCCCAGCT+CGG | + | chr5.2:25531262-25531281 | MS.gene68340:intron | 45.0% |
| ! | AGCGATTTTCGTATGAGCTG+AGG | + | chr5.2:25532541-25532560 | MS.gene68340:intron | 45.0% |
| ! | CCCCAAAGAATTTGGTGGAA+TGG | + | chr5.2:25532474-25532493 | MS.gene68340:intron | 45.0% |
| ! | CTGTGCCAATAACTTTTGCC+TGG | - | chr5.2:25533232-25533251 | None:intergenic | 45.0% |
| ! | GCCTGACCTGACCTTTTTAA+AGG | - | chr5.2:25531826-25531845 | None:intergenic | 45.0% |
| ! | GCCTTTAAAAAGGTCAGGTC+AGG | + | chr5.2:25531660-25531679 | MS.gene68340:intron | 45.0% |
| ! | GTGGATTTGGGGTTTCTTCA+TGG | + | chr5.2:25530961-25530980 | MS.gene68340:intron | 45.0% |
| ! | TGATTTGGATATGTGGGGCT+GGG | - | chr5.2:25532575-25532594 | None:intergenic | 45.0% |
| !! | AGCTGGGCTTTAAATAGGCT+AGG | - | chr5.2:25531262-25531281 | None:intergenic | 45.0% |
| !! | ATACACAAGGCGGTTGATAG+AGG | + | chr5.2:25531174-25531193 | MS.gene68340:intron | 45.0% |
| !! | ATGAGCCTATGACGGGTAAT+AGG | + | chr5.2:25531853-25531872 | MS.gene68340:intron | 45.0% |
| !! | CTTCGTTGAGTGGATTGTCT+TGG | - | chr5.2:25530875-25530894 | None:intergenic | 45.0% |
| !!! | ATCAATGTGTTTTGGTGGGG+AGG | + | chr5.2:25532424-25532443 | MS.gene68340:intron | 45.0% |
| !!! | CTTGTTTTGCATGGCCAATG+TGG | + | chr5.2:25532019-25532038 | MS.gene68340:intron | 45.0% |
| !!! | CTTTGGGGCATTTTATCTCG+CGG | - | chr5.2:25532462-25532481 | None:intergenic | 45.0% |
| !!! | TTTTGAAGTAGGCCAGGCTT+AGG | + | chr5.2:25531895-25531914 | MS.gene68340:intron | 45.0% |
| !! | TTATTATCATTATTATTATT+AGG | + | chr5.2:25533976-25533995 | MS.gene68340:intron | 5.0% |
| AAAAATGCTAGGCCTGAGCC+TGG | - | chr5.2:25531879-25531898 | None:intergenic | 50.0% | |
| AACAACAGATGGGACACCAC+TGG | - | chr5.2:25531984-25532003 | None:intergenic | 50.0% | |
| AACCCTTGGCTGGGTACAAT+AGG | - | chr5.2:25531090-25531109 | None:intergenic | 50.0% | |
| ACGTTGTGCTTCCACCACAT+TGG | - | chr5.2:25532036-25532055 | None:intergenic | 50.0% | |
| AGATAGGATACGTTCCCGGT+AGG | + | chr5.2:25530436-25530455 | MS.gene68340:intron | 50.0% | |
| AGCATTGTCGAAGGAAGGGA+AGG | + | chr5.2:25532307-25532326 | MS.gene68340:intron | 50.0% | |
| AGCCTATTGTACCCAGCCAA+GGG | + | chr5.2:25531085-25531104 | MS.gene68340:intron | 50.0% | |
| CACAGTGGTCTCTATTGCAG+GGG | + | chr5.2:25533247-25533266 | MS.gene68340:CDS | 50.0% | |
| CAGTCGTAATATGAGTGGGG+CGG | + | chr5.2:25532130-25532149 | MS.gene68340:intron | 50.0% | |
| CTCAACGAAGAGGAAGTCGA+AGG | + | chr5.2:25530885-25530904 | MS.gene68340:intron | 50.0% | |
| GAAGGGATGGAGAGAGGAAT+TGG | + | chr5.2:25530903-25530922 | MS.gene68340:intron | 50.0% | |
| GACTTTGTAAGGCCTAAGCC+TGG | - | chr5.2:25531910-25531929 | None:intergenic | 50.0% | |
| GCACAGTGGTCTCTATTGCA+GGG | + | chr5.2:25533246-25533265 | MS.gene68340:CDS | 50.0% | |
| GGCTTAGGCCTTACAAAGTC+CGG | + | chr5.2:25531910-25531929 | MS.gene68340:intron | 50.0% | |
| GGTCATTGCACTTAGCATGG+GGG | + | chr5.2:25534291-25534310 | MS.gene68340:CDS | 50.0% | |
| GTACAAGTAGGGGTGGGAAT+AGG | + | chr5.2:25531210-25531229 | MS.gene68340:intron | 50.0% | |
| TCGACTTCCTCTTCGTTGAG+TGG | - | chr5.2:25530885-25530904 | None:intergenic | 50.0% | |
| TCGGTGAGAAATGGATCCAG+TGG | + | chr5.2:25531004-25531023 | MS.gene68340:intron | 50.0% | |
| ! | CCGTCATAGGCTCATTTTCG+AGG | - | chr5.2:25531848-25531867 | None:intergenic | 50.0% |
| ! | GACGAGCATTGTCGAAGGAA+GGG | + | chr5.2:25532303-25532322 | MS.gene68340:intron | 50.0% |
| ! | GCATCGGCCACATTTACTTG+TGG | - | chr5.2:25533513-25533532 | None:intergenic | 50.0% |
| ! | GGAGCAGTCTGTGTTTGTTG+AGG | + | chr5.2:25530816-25530835 | MS.gene68340:intron | 50.0% |
| ! | GGTGCTTTTCTTCTTGCAGC+TGG | + | chr5.2:25533380-25533399 | MS.gene68340:CDS | 50.0% |
| ! | GTTTTGCATGGCCAATGTGG+TGG | + | chr5.2:25532022-25532041 | MS.gene68340:intron | 50.0% |
| !! | CTGATTTGGATATGTGGGGC+TGG | - | chr5.2:25532576-25532595 | None:intergenic | 50.0% |
| !! | GTCCAACATGTGATGGGTAC+TGG | + | chr5.2:25532182-25532201 | MS.gene68340:intron | 50.0% |
| !!! | ATGTGTTTTGGTGGGGAGGA+AGG | + | chr5.2:25532428-25532447 | MS.gene68340:intron | 50.0% |
| CATGGGGTACAAGTAGGGGT+GGG | + | chr5.2:25531204-25531223 | MS.gene68340:intron | 55.0% | |
| CCTAGCCCATTTCCACCTCT+AGG | + | chr5.2:25531938-25531957 | MS.gene68340:intron | 55.0% | |
| CCTGGCCTATTACCCGTCAT+AGG | - | chr5.2:25531861-25531880 | None:intergenic | 55.0% | |
| CGAAGAGGAAGTCGAAGGGA+TGG | + | chr5.2:25530890-25530909 | MS.gene68340:intron | 55.0% | |
| GAAGTCGAAGGGATGGAGAG+AGG | + | chr5.2:25530897-25530916 | MS.gene68340:intron | 55.0% | |
| GAGCCTATTGTACCCAGCCA+AGG | + | chr5.2:25531084-25531103 | MS.gene68340:intron | 55.0% | |
| GGCACAGTGGTCTCTATTGC+AGG | + | chr5.2:25533245-25533264 | MS.gene68340:CDS | 55.0% | |
| TCATGGGGTACAAGTAGGGG+TGG | + | chr5.2:25531203-25531222 | MS.gene68340:intron | 55.0% | |
| ! | CCTAGAGGTGGAAATGGGCT+AGG | - | chr5.2:25531941-25531960 | None:intergenic | 55.0% |
| ! | GGACGAGCATTGTCGAAGGA+AGG | + | chr5.2:25532302-25532321 | MS.gene68340:intron | 55.0% |
| !! | CCTATGACGGGTAATAGGCC+AGG | + | chr5.2:25531858-25531877 | MS.gene68340:intron | 55.0% |
| !! | GGCCGAGCTGGGCTTTAAAT+AGG | - | chr5.2:25531267-25531286 | None:intergenic | 55.0% |
| ACGGGTAATAGGCCAGGCTC+AGG | + | chr5.2:25531864-25531883 | MS.gene68340:intron | 60.0% | |
| AGCTTAATAGGCCGGCCCGA+TGG | - | chr5.2:25531384-25531403 | None:intergenic | 60.0% | |
| AGGCCTTACAAAGTCCGGCC+CGG | + | chr5.2:25531915-25531934 | MS.gene68340:intron | 60.0% | |
| AGTAAGTTGCGGCGCACCAG+TGG | + | chr5.2:25531965-25531984 | MS.gene68340:intron | 60.0% | |
| AGTAGGGGTGGGAATAGGCC+AGG | + | chr5.2:25531215-25531234 | MS.gene68340:intron | 60.0% | |
| ATAAACGAGCTGGGCCGAGC+TGG | - | chr5.2:25531279-25531298 | None:intergenic | 60.0% | |
| GCCTATTAAGCCCATCGGGC+CGG | + | chr5.2:25531370-25531389 | MS.gene68340:intron | 60.0% | |
| GCTTAATAGGCCGGCCCGAT+GGG | - | chr5.2:25531383-25531402 | None:intergenic | 60.0% | |
| TAAACGAGCTGGGCCGAGCT+GGG | - | chr5.2:25531278-25531297 | None:intergenic | 60.0% | |
| ! | GAGGGGACGAGCATTGTCGA+AGG | + | chr5.2:25532298-25532317 | MS.gene68340:intron | 60.0% |
| !! | AGGTGGAAATGGGCTAGGCC+GGG | - | chr5.2:25531936-25531955 | None:intergenic | 60.0% |
| !! | ATGGGGATAACGGGTCACCC+TGG | - | chr5.2:25531116-25531135 | None:intergenic | 60.0% |
| !! | GAGGTGGAAATGGGCTAGGC+CGG | - | chr5.2:25531937-25531956 | None:intergenic | 60.0% |
| AATAGGCCAGGCCGTCCGAC+AGG | + | chr5.2:25531227-25531246 | MS.gene68340:intron | 65.0% | |
| AGGCCGGGCCGGACTTTGTA+AGG | - | chr5.2:25531921-25531940 | None:intergenic | 65.0% | |
| ATAGGCCAGGCCGTCCGACA+GGG | + | chr5.2:25531228-25531247 | MS.gene68340:intron | 65.0% | |
| TATGAGTGGGGCGGCGCAAG+AGG | + | chr5.2:25532139-25532158 | MS.gene68340:intron | 65.0% | |
| ! | GCCGGCCCGATGGGCTTAAT+AGG | - | chr5.2:25531374-25531393 | None:intergenic | 65.0% |
| ACCCAGCCAAGGGTTGCGCC+AGG | + | chr5.2:25531095-25531114 | MS.gene68340:intron | 70.0% | |
| ACCCTGGCGCAACCCTTGGC+TGG | - | chr5.2:25531100-25531119 | None:intergenic | 70.0% | |
| CCCAGCCAAGGGTTGCGCCA+GGG | + | chr5.2:25531096-25531115 | MS.gene68340:intron | 70.0% | |
| CCCTGGCGCAACCCTTGGCT+GGG | - | chr5.2:25531099-25531118 | None:intergenic | 70.0% | |
| GCTAGGCCGTAGGCCCCTGT+CGG | - | chr5.2:25531245-25531264 | None:intergenic | 70.0% | |
| GGTCACCCTGGCGCAACCCT+TGG | - | chr5.2:25531104-25531123 | None:intergenic | 70.0% | |
| TAGGCCAGGCCGTCCGACAG+GGG | + | chr5.2:25531229-25531248 | MS.gene68340:intron | 70.0% | |
| !! | GGAAATGGGCTAGGCCGGGC+CGG | - | chr5.2:25531932-25531951 | None:intergenic | 70.0% |
| GGCCGTAGGCCCCTGTCGGA+CGG | - | chr5.2:25531241-25531260 | None:intergenic | 75.0% | |
| GGCCGTCCGACAGGGGCCTA+CGG | + | chr5.2:25531236-25531255 | MS.gene68340:intron | 75.0% | |
| TAGGCCCCTGTCGGACGGCC+TGG | - | chr5.2:25531236-25531255 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.2 | gene | 25529968 | 25534347 | 25529968 | ID=MS.gene68340 |
| chr5.2 | mRNA | 25529968 | 25534347 | 25529968 | ID=MS.gene68340.t1;Parent=MS.gene68340 |
| chr5.2 | exon | 25529968 | 25530081 | 25529968 | ID=MS.gene68340.t1.exon1;Parent=MS.gene68340.t1 |
| chr5.2 | CDS | 25529968 | 25530081 | 25529968 | ID=cds.MS.gene68340.t1;Parent=MS.gene68340.t1 |
| chr5.2 | exon | 25533196 | 25533436 | 25533196 | ID=MS.gene68340.t1.exon2;Parent=MS.gene68340.t1 |
| chr5.2 | CDS | 25533196 | 25533436 | 25533196 | ID=cds.MS.gene68340.t1;Parent=MS.gene68340.t1 |
| chr5.2 | exon | 25533804 | 25533962 | 25533804 | ID=MS.gene68340.t1.exon3;Parent=MS.gene68340.t1 |
| chr5.2 | CDS | 25533804 | 25533962 | 25533804 | ID=cds.MS.gene68340.t1;Parent=MS.gene68340.t1 |
| chr5.2 | exon | 25534196 | 25534347 | 25534196 | ID=MS.gene68340.t1.exon4;Parent=MS.gene68340.t1 |
| chr5.2 | CDS | 25534196 | 25534347 | 25534196 | ID=cds.MS.gene68340.t1;Parent=MS.gene68340.t1 |
| Gene Sequence |
| Protein sequence |
