Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68398.t1 | XP_003590173.2 | 99.1 | 798 | 7 | 0 | 1 | 798 | 1 | 798 | 0.00E+00 | 1318.1 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68398.t1 | O23052 | 77.4 | 806 | 172 | 5 | 1 | 798 | 1 | 804 | 1.5e-293 | 1010.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68398.t1 | G7I6P0 | 99.1 | 798 | 7 | 0 | 1 | 798 | 1 | 798 | 0.0e+00 | 1318.1 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene68398 | MS.gene067862 | PPI |
| MS.gene68398 | MS.gene05802 | PPI |
| MS.gene68398 | MS.gene072035 | PPI |
| MS.gene68398 | MS.gene00644 | PPI |
| MS.gene68398 | MS.gene002070 | PPI |
| MS.gene68398 | MS.gene41781 | PPI |
| MS.gene68398 | MS.gene08159 | PPI |
| MS.gene68398 | MS.gene042471 | PPI |
| MS.gene68398 | MS.gene43594 | PPI |
| MS.gene68398 | MS.gene002687 | PPI |
| MS.gene68398 | MS.gene047176 | PPI |
| MS.gene68398 | MS.gene004367 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68398.t1 | MTR_1g045490 | 99.123 | 798 | 7 | 0 | 1 | 798 | 1 | 798 | 0.0 | 1641 |
| MS.gene68398.t1 | MTR_1g079510 | 23.411 | 299 | 196 | 2 | 201 | 473 | 140 | 431 | 2.60e-12 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68398.t1 | AT1G05150 | 76.837 | 803 | 176 | 5 | 1 | 795 | 1 | 801 | 0.0 | 1308 |
| MS.gene68398.t1 | AT2G32450 | 76.750 | 800 | 176 | 6 | 1 | 795 | 1 | 795 | 0.0 | 1293 |
| MS.gene68398.t1 | AT3G04240 | 26.506 | 249 | 168 | 3 | 201 | 449 | 131 | 364 | 2.44e-13 | 74.7 |
| MS.gene68398.t1 | AT3G04240 | 22.846 | 267 | 180 | 2 | 233 | 473 | 88 | 354 | 6.00e-12 | 70.1 |
| MS.gene68398.t1 | AT3G04240 | 23.715 | 253 | 161 | 4 | 233 | 473 | 190 | 422 | 4.82e-11 | 67.0 |
Find 201 sgRNAs with CRISPR-Local
Find 231 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTATCGGTTCGCGCTTTA+AGG | 0.091534 | 1.3:+27077779 | MS.gene68398:CDS |
| AGAAAGAATCCTCTCATTTA+TGG | 0.127070 | 1.3:-27077364 | None:intergenic |
| ATTGATGCTCTTTATAATTT+AGG | 0.139271 | 1.3:+27076793 | MS.gene68398:CDS |
| GATGATCCAGATTGGGGTTT+TGG | 0.192976 | 1.3:+27077675 | MS.gene68398:CDS |
| TAATTTAGGTGGATTGTATA+TGG | 0.219261 | 1.3:+27076807 | MS.gene68398:CDS |
| TTAAAGCGCGAACCGATAAT+AGG | 0.224124 | 1.3:-27077777 | None:intergenic |
| GCAGGAAGAGTACAGATTTA+AGG | 0.228301 | 1.3:+27077869 | MS.gene68398:CDS |
| GTATGAACATCAATTGTTTA+AGG | 0.249934 | 1.3:+27076291 | MS.gene68398:CDS |
| AAGCATTGAAAATGACAAAT+AGG | 0.254087 | 1.3:+27076971 | MS.gene68398:CDS |
| TGAGAGGATTCTTTCTGTTT+TGG | 0.256631 | 1.3:+27077371 | MS.gene68398:CDS |
| TTTCTTCCAAGTTCGGTTTC+CGG | 0.269538 | 1.3:-27077284 | None:intergenic |
| TTCGGATAAGAGAGTGGTTT+GGG | 0.272199 | 1.3:+27076147 | MS.gene68398:CDS |
| GAGTACAGATTTAAGGAGTA+TGG | 0.280282 | 1.3:+27077876 | MS.gene68398:CDS |
| TGAGTGCTTGTGAGTATTAT+AGG | 0.285254 | 1.3:+27076539 | MS.gene68398:CDS |
| GCTAAAGATGGGAAAATTAA+AGG | 0.286177 | 1.3:+27076061 | MS.gene68398:CDS |
| TGCTGGTTGGTCTCGCGAAT+TGG | 0.301878 | 1.3:+27076108 | MS.gene68398:CDS |
| GCTGGTTGGTCTCGCGAATT+GGG | 0.304388 | 1.3:+27076109 | MS.gene68398:CDS |
| CATCATGATTCGCGTCGAAT+TGG | 0.309699 | 1.3:-27075613 | None:intergenic |
| GCAAGTACACTTATCTTTCA+TGG | 0.311003 | 1.3:-27077913 | None:intergenic |
| GGTAATTGTTATTATGTTCT+TGG | 0.314765 | 1.3:+27076382 | MS.gene68398:CDS |
| TGAGATGTATACGAGAGTTT+TGG | 0.329243 | 1.3:+27076855 | MS.gene68398:CDS |
| GAGTGCTTGTGAGTATTATA+GGG | 0.332729 | 1.3:+27076540 | MS.gene68398:CDS |
| GGGGCCTTCGACTGAGATTT+CGG | 0.342250 | 1.3:+27076129 | MS.gene68398:CDS |
| CGTTAACCTTGGTATTTCAT+TGG | 0.351194 | 1.3:+27076498 | MS.gene68398:CDS |
| CCAGATACATCCAGTTGTTA+AGG | 0.351923 | 1.3:+27077553 | MS.gene68398:CDS |
| CTCTGGAGGACCACCACAAA+TGG | 0.355655 | 1.3:-27077448 | None:intergenic |
| GATGTGCCGGTGTCGTATTC+TGG | 0.361458 | 1.3:+27077237 | MS.gene68398:CDS |
| TTATGTTCTTGGAAGGTATA+AGG | 0.364044 | 1.3:+27076393 | MS.gene68398:CDS |
| TTTCGGATAAGAGAGTGGTT+TGG | 0.368094 | 1.3:+27076146 | MS.gene68398:CDS |
| TAAGGCTCCGGCGCCGGATT+CGG | 0.368801 | 1.3:+27075874 | MS.gene68398:CDS |
| ATTAGCACCGTCTTCGTTCA+TGG | 0.368955 | 1.3:-27077511 | None:intergenic |
| CCAAGGTGTTAGCGAATTGA+TGG | 0.371774 | 1.3:+27077593 | MS.gene68398:CDS |
| ACCTATGCTGAATTTATTGA+TGG | 0.375679 | 1.3:+27075740 | MS.gene68398:CDS |
| TGGCTGTGTGGCCGAATCAT+TGG | 0.382968 | 1.3:+27076875 | MS.gene68398:CDS |
| CCTTAACAACTGGATGTATC+TGG | 0.383500 | 1.3:-27077553 | None:intergenic |
| CGAAGAATTTCTTCCAAGTT+CGG | 0.385586 | 1.3:-27077291 | None:intergenic |
| TTTCGGCGTAGGGGAATATA+AGG | 0.387188 | 1.3:+27076621 | MS.gene68398:CDS |
| GCTATTCTTGCTCCCATTTG+TGG | 0.391363 | 1.3:+27077435 | MS.gene68398:CDS |
| ATGACAAATGGCGATTCTTC+CGG | 0.395230 | 1.3:-27077066 | None:intergenic |
| TATGTTTGATGATCCAGATT+GGG | 0.395444 | 1.3:+27077668 | MS.gene68398:CDS |
| CATAAACAGCCCTTAACAAC+TGG | 0.401595 | 1.3:-27077563 | None:intergenic |
| ATGGTGCTGGTGATGTTGAT+AGG | 0.403408 | 1.3:+27075807 | MS.gene68398:CDS |
| GAACAAGGCTGTGTCGTTGC+TGG | 0.409634 | 1.3:+27076909 | MS.gene68398:CDS |
| ACAGCTCCTTGAAAAGTGTC+TGG | 0.414755 | 1.3:-27077336 | None:intergenic |
| AAGAACATAATAACAATTAC+CGG | 0.417448 | 1.3:-27076380 | None:intergenic |
| GTCCTCCAGAGAGACGTAAA+AGG | 0.418171 | 1.3:+27077460 | MS.gene68398:CDS |
| AACTGCGCCCGCCAATGATT+CGG | 0.418538 | 1.3:-27076886 | None:intergenic |
| AATTGCAACCTGTTGATGTT+AGG | 0.419007 | 1.3:+27076344 | MS.gene68398:CDS |
| GACGACGAAGCCTCCGAATC+CGG | 0.424113 | 1.3:-27075887 | None:intergenic |
| TTTGATGCTTATTCTGATGC+TGG | 0.425129 | 1.3:+27076091 | MS.gene68398:CDS |
| GAAGGCTATTGATTTGAAAC+CGG | 0.425202 | 1.3:+27076765 | MS.gene68398:CDS |
| ACCTTAGTGAAGCTTGAAAC+AGG | 0.426443 | 1.3:+27077708 | MS.gene68398:CDS |
| TGCACATTGTGATCTGGCTT+CGG | 0.426766 | 1.3:+27076696 | MS.gene68398:CDS |
| TGCTGATGCACATTGTGATC+TGG | 0.428424 | 1.3:+27076690 | MS.gene68398:CDS |
| AGGTGGATTGTATATGGACT+TGG | 0.432754 | 1.3:+27076813 | MS.gene68398:CDS |
| GCACTTGAAGCTGCTGAGGC+TGG | 0.432831 | 1.3:+27076439 | MS.gene68398:CDS |
| TCGTCGCACCTTCTCCGATC+TGG | 0.433820 | 1.3:-27075582 | None:intergenic |
| AAATGAGGCCTAACATCAAC+AGG | 0.435494 | 1.3:-27076352 | None:intergenic |
| CTGAGGCTGGTGGAAATCAA+TGG | 0.435659 | 1.3:+27076452 | MS.gene68398:CDS |
| ATCCATCCGGAAACCGAACT+TGG | 0.438061 | 1.3:+27077278 | MS.gene68398:CDS |
| CAGATACATCCAGTTGTTAA+GGG | 0.440498 | 1.3:+27077554 | MS.gene68398:CDS |
| GCTGTGTCGTTGCTGGGAGC+TGG | 0.440564 | 1.3:+27076916 | MS.gene68398:CDS |
| TCTTCCTGCTTAAATGTAGA+AGG | 0.441960 | 1.3:-27077855 | None:intergenic |
| TAAAGCGCGAACCGATAATA+GGG | 0.442618 | 1.3:-27077776 | None:intergenic |
| ATCATGATTCGCGTCGAATT+GGG | 0.445997 | 1.3:-27075612 | None:intergenic |
| GTGTGCCGCTACCCTATTAT+CGG | 0.446048 | 1.3:+27077765 | MS.gene68398:CDS |
| TTTGATGGACATATGGCAAT+TGG | 0.447629 | 1.3:+27076259 | MS.gene68398:CDS |
| GAAGAAATGGCGTCGCTTGT+TGG | 0.450116 | 1.3:+27075650 | MS.gene68398:CDS |
| AGAGTGGTTTGGGATGAATC+AGG | 0.453698 | 1.3:+27076157 | MS.gene68398:CDS |
| AGCATTGAAAATGACAAATA+GGG | 0.458819 | 1.3:+27076972 | MS.gene68398:CDS |
| TTCATTGGAAGGTGAAGGTA+TGG | 0.460120 | 1.3:+27076513 | MS.gene68398:CDS |
| GGTTCAGGCAGATTAGATCT+TGG | 0.460339 | 1.3:+27077402 | MS.gene68398:CDS |
| AGTTCTCAAAAGACCCTCAT+AGG | 0.463697 | 1.3:-27075777 | None:intergenic |
| CATCAATTCGCTAACACCTT+GGG | 0.469273 | 1.3:-27077592 | None:intergenic |
| GGCTGGTAAGGCTCCGGCGC+CGG | 0.469988 | 1.3:+27075868 | MS.gene68398:CDS |
| ATCACCAACTGTCTTAAACT+TGG | 0.470600 | 1.3:-27077100 | None:intergenic |
| TAATGTTGATGAGGCTGGTA+AGG | 0.476974 | 1.3:+27075856 | MS.gene68398:CDS |
| AAAAGAAGAACAAACCCAAT+GGG | 0.477510 | 1.3:+27077037 | MS.gene68398:CDS |
| TTAGCACCGTCTTCGTTCAT+GGG | 0.478305 | 1.3:-27077510 | None:intergenic |
| TGCTCTGATTTGCAGAGCAC+TGG | 0.481480 | 1.3:-27077148 | None:intergenic |
| GATTGTATATGGACTTGGGT+AGG | 0.484500 | 1.3:+27076818 | MS.gene68398:CDS |
| GAAGCAGCGGACAGCTGCGT+GGG | 0.488728 | 1.3:+27075946 | MS.gene68398:CDS |
| TCTTCCGGAGTATCCCCATT+GGG | 0.488844 | 1.3:-27077051 | None:intergenic |
| CTTGCTTTAACTTGCAATCA+CGG | 0.490282 | 1.3:+27077931 | MS.gene68398:CDS |
| GCTGTTTATGTTCCTTCCCA+AGG | 0.490782 | 1.3:+27077576 | MS.gene68398:CDS |
| TGAGAGGGGTTTGACCTATG+AGG | 0.492063 | 1.3:+27075763 | MS.gene68398:CDS |
| TCCTGTTTCAAGCTTCACTA+AGG | 0.493440 | 1.3:-27077709 | None:intergenic |
| AACCTTGGTATTTCATTGGA+AGG | 0.494888 | 1.3:+27076502 | MS.gene68398:CDS |
| CCATCAATTCGCTAACACCT+TGG | 0.498413 | 1.3:-27077593 | None:intergenic |
| CTGAATTTATTGATGGTGAG+AGG | 0.498743 | 1.3:+27075747 | MS.gene68398:CDS |
| ATGCTTATTCTGATGCTGGT+TGG | 0.499363 | 1.3:+27076095 | MS.gene68398:CDS |
| ATAATACCAAAACCCCAATC+TGG | 0.499632 | 1.3:-27077681 | None:intergenic |
| GGCTCCGGCGCCGGATTCGG+AGG | 0.500795 | 1.3:+27075877 | MS.gene68398:CDS |
| TTGTTGGTGCTGTAAACCCT+AGG | 0.505292 | 1.3:+27075666 | MS.gene68398:CDS |
| GGGTTTGAATAGGGAAGAAA+TGG | 0.505358 | 1.3:+27075637 | MS.gene68398:CDS |
| TCATCGCTGAATTTCACCCT+AGG | 0.505804 | 1.3:-27075683 | None:intergenic |
| TATACATCTCAGAAGCCCTC+TGG | 0.506094 | 1.3:-27076843 | None:intergenic |
| AGTGCCTTCTACATTTAAGC+AGG | 0.506565 | 1.3:+27077851 | MS.gene68398:CDS |
| ATTTAAGGAGTATGGAAATG+AGG | 0.508497 | 1.3:+27077884 | MS.gene68398:CDS |
| ATTGTTATTATGTTCTTGGA+AGG | 0.509069 | 1.3:+27076386 | MS.gene68398:CDS |
| CATCGCTGAATTTCACCCTA+GGG | 0.509482 | 1.3:-27075682 | None:intergenic |
| GTTGGCACTTGAAGCTGCTG+AGG | 0.511145 | 1.3:+27076435 | MS.gene68398:CDS |
| CAATTCGACGCGAATCATGA+TGG | 0.511494 | 1.3:+27075614 | MS.gene68398:CDS |
| TTCCAAGTTCGGTTTCCGGA+TGG | 0.512298 | 1.3:-27077280 | None:intergenic |
| AAGTTGAAGCAAGCTAAAGA+TGG | 0.512508 | 1.3:+27076049 | MS.gene68398:CDS |
| GATGGTTCAACTATGACAAA+TGG | 0.513195 | 1.3:-27077078 | None:intergenic |
| CAATGTGCATCAGCATAATC+CGG | 0.513831 | 1.3:-27076682 | None:intergenic |
| CCAACTGTCTTAAACTTGGA+TGG | 0.518220 | 1.3:-27077096 | None:intergenic |
| TCTGGAGGACCACCACAAAT+GGG | 0.519206 | 1.3:-27077447 | None:intergenic |
| CCATCCAAGTTTAAGACAGT+TGG | 0.521392 | 1.3:+27077096 | MS.gene68398:CDS |
| GATGCTCTTTATAATTTAGG+TGG | 0.522580 | 1.3:+27076796 | MS.gene68398:CDS |
| TTCTTCCGGAGTATCCCCAT+TGG | 0.523550 | 1.3:-27077052 | None:intergenic |
| AATTCGACGCGAATCATGAT+GGG | 0.523961 | 1.3:+27075615 | MS.gene68398:CDS |
| TCTTGATCTTAATGTTGATG+AGG | 0.525215 | 1.3:+27075847 | MS.gene68398:CDS |
| AACAAGGCTGTGTCGTTGCT+GGG | 0.526390 | 1.3:+27076910 | MS.gene68398:CDS |
| CCGGTGTCGTATTCTGGTAC+CGG | 0.527238 | 1.3:+27077243 | MS.gene68398:CDS |
| TGATGAGGCTGGTAAGGCTC+CGG | 0.528240 | 1.3:+27075862 | MS.gene68398:CDS |
| TGGGCAGTGTCGCCGAATCA+CGG | 0.531689 | 1.3:+27075965 | MS.gene68398:CDS |
| TTATGTTTGATGATCCAGAT+TGG | 0.532134 | 1.3:+27077667 | MS.gene68398:CDS |
| GGTGGATTGTATATGGACTT+GGG | 0.533769 | 1.3:+27076814 | MS.gene68398:CDS |
| CCACAGATTTACGTTAACCT+TGG | 0.534817 | 1.3:+27076487 | MS.gene68398:CDS |
| GTATTCTGGTACCGGAGTGC+CGG | 0.535859 | 1.3:+27077251 | MS.gene68398:CDS |
| TGAGGCTGGTGGAAATCAAT+GGG | 0.536232 | 1.3:+27076453 | MS.gene68398:CDS |
| ACGCCACAACAGTGCATCAA+AGG | 0.539130 | 1.3:-27077487 | None:intergenic |
| GGTATTTCATTGGAAGGTGA+AGG | 0.539408 | 1.3:+27076508 | MS.gene68398:CDS |
| TTTAAGGAGTATGGAAATGA+GGG | 0.541065 | 1.3:+27077885 | MS.gene68398:CDS |
| TCGAACACAATACCGTGATT+CGG | 0.541163 | 1.3:-27075977 | None:intergenic |
| GATCTTAATGTTGATGAGGC+TGG | 0.541445 | 1.3:+27075851 | MS.gene68398:CDS |
| GAGAGGGGTTTGACCTATGA+GGG | 0.544066 | 1.3:+27075764 | MS.gene68398:CDS |
| AGCGAATTGATGGAGGTTCG+TGG | 0.549361 | 1.3:+27077603 | MS.gene68398:CDS |
| GAGCACTTCAGAAGGTTGCT+AGG | 0.552630 | 1.3:+27077166 | MS.gene68398:CDS |
| TGGTGCTGGTGATGTTGATA+GGG | 0.553001 | 1.3:+27075808 | MS.gene68398:CDS |
| TGAGGATGAGAGGGCGATTG+AGG | 0.555091 | 1.3:+27076735 | MS.gene68398:CDS |
| TGAACATCAATTGTTTAAGG+AGG | 0.556104 | 1.3:+27076294 | MS.gene68398:CDS |
| GAAGCCTCCGAATCCGGCGC+CGG | 0.560444 | 1.3:-27075881 | None:intergenic |
| AAGGCTATTGATTTGAAACC+GGG | 0.563307 | 1.3:+27076766 | MS.gene68398:CDS |
| CTGTGTGGCCGAATCATTGG+CGG | 0.563491 | 1.3:+27076878 | MS.gene68398:CDS |
| ATGTTTGATGATCCAGATTG+GGG | 0.563924 | 1.3:+27077669 | MS.gene68398:CDS |
| GTAGCGGCACACTGCGCACA+TGG | 0.564516 | 1.3:-27077754 | None:intergenic |
| GGCGATTGAGGTGTTTCAGA+AGG | 0.565595 | 1.3:+27076747 | MS.gene68398:CDS |
| CTTGAAGCTGCTGAGGCTGG+TGG | 0.566338 | 1.3:+27076442 | MS.gene68398:CDS |
| TGATAAGACTACTATGAGGC+AGG | 0.567277 | 1.3:+27077119 | MS.gene68398:CDS |
| AGAACTTATGATGATGGTGC+TGG | 0.568989 | 1.3:+27075794 | MS.gene68398:CDS |
| AGTTGAAGCAAGCTAAAGAT+GGG | 0.572882 | 1.3:+27076050 | MS.gene68398:CDS |
| CAATTACCGGCTCTAAAATG+AGG | 0.573747 | 1.3:-27076367 | None:intergenic |
| ATTCTTGCTCCCATTTGTGG+TGG | 0.574006 | 1.3:+27077438 | MS.gene68398:CDS |
| AAGAGGCACCAGATCGGAGA+AGG | 0.575767 | 1.3:+27075574 | MS.gene68398:CDS |
| TGTGTGGCCGAATCATTGGC+GGG | 0.581219 | 1.3:+27076879 | MS.gene68398:CDS |
| GCAAATCAGAGCACTTCAGA+AGG | 0.581238 | 1.3:+27077158 | MS.gene68398:CDS |
| TTTAGAGCTTTGAAACTGCT+AGG | 0.581584 | 1.3:+27076589 | MS.gene68398:CDS |
| TTGGCGGGCGCAGTTGAACA+AGG | 0.581691 | 1.3:+27076894 | MS.gene68398:CDS |
| CGTCGTCGATTGTTGATGAG+AGG | 0.586246 | 1.3:+27075903 | MS.gene68398:CDS |
| GGCTTTGATTAGTTTCAAGA+GGG | 0.586536 | 1.3:+27076315 | MS.gene68398:CDS |
| CAAACCCAATGGGGATACTC+CGG | 0.586605 | 1.3:+27077047 | MS.gene68398:CDS |
| TGGAGACGTAGACACTTCAA+TGG | 0.586995 | 1.3:+27077623 | MS.gene68398:CDS |
| AGGCTTTGATTAGTTTCAAG+AGG | 0.587245 | 1.3:+27076314 | MS.gene68398:CDS |
| AAGTTGAAAATGGCGACAAG+AGG | 0.588366 | 1.3:+27075557 | None:intergenic |
| GTCGATTGTTGATGAGAGGA+TGG | 0.588641 | 1.3:+27075907 | MS.gene68398:CDS |
| GAGTGGTTTGGGATGAATCA+GGG | 0.590750 | 1.3:+27076158 | MS.gene68398:CDS |
| TGCTGTTAAAGCGCTTGAAG+AGG | 0.590830 | 1.3:+27076645 | MS.gene68398:CDS |
| CTGGTTGGTCTCGCGAATTG+GGG | 0.593676 | 1.3:+27076110 | MS.gene68398:CDS |
| GGCTTTGCATGCTATGCGTG+AGG | 0.593677 | 1.3:+27076717 | MS.gene68398:CDS |
| TGAGATTTCGGATAAGAGAG+TGG | 0.596774 | 1.3:+27076141 | MS.gene68398:CDS |
| AGAAGCAGCGGACAGCTGCG+TGG | 0.598942 | 1.3:+27075945 | MS.gene68398:CDS |
| TGAATTTATTGATGGTGAGA+GGG | 0.600926 | 1.3:+27075748 | MS.gene68398:CDS |
| GAATTTATTGATGGTGAGAG+GGG | 0.601386 | 1.3:+27075749 | MS.gene68398:CDS |
| TCGCCTTTGATGCACTGTTG+TGG | 0.602680 | 1.3:+27077484 | MS.gene68398:CDS |
| CACCTTCCAATGAAATACCA+AGG | 0.606948 | 1.3:-27076504 | None:intergenic |
| TGCTATGCGTGAGGATGAGA+GGG | 0.607406 | 1.3:+27076726 | MS.gene68398:CDS |
| GTTTCAAGCTTCACTAAGGT+AGG | 0.614099 | 1.3:-27077705 | None:intergenic |
| ATGCTATGCGTGAGGATGAG+AGG | 0.621923 | 1.3:+27076725 | MS.gene68398:CDS |
| TGTTGATGAGAGGATGGCGG+TGG | 0.624786 | 1.3:+27075913 | MS.gene68398:CDS |
| AATGAGCGAACATGATGTGC+CGG | 0.625733 | 1.3:+27077224 | MS.gene68398:CDS |
| ACCATCAATAAATTCAGCAT+AGG | 0.627070 | 1.3:-27075741 | None:intergenic |
| GGCGACAAGAGGCACCAGAT+CGG | 0.627503 | 1.3:+27075568 | MS.gene68398:CDS |
| TTATCCGAAATCTCAGTCGA+AGG | 0.627881 | 1.3:-27076133 | None:intergenic |
| TGGCGTCCCATGAACGAAGA+CGG | 0.628298 | 1.3:+27077504 | MS.gene68398:CDS |
| TGGACTTGGGTAGGTTCCAG+AGG | 0.630541 | 1.3:+27076827 | MS.gene68398:CDS |
| TTCAAAGCTCTAAAATGCGT+AGG | 0.630809 | 1.3:-27076580 | None:intergenic |
| GGACTTGGGTAGGTTCCAGA+GGG | 0.631626 | 1.3:+27076828 | MS.gene68398:CDS |
| AATCAACGCAATTCTCGATG+AGG | 0.631687 | 1.3:+27075709 | MS.gene68398:CDS |
| TGTAACCAATGCTACAGCGA+AGG | 0.633386 | 1.3:+27077825 | MS.gene68398:CDS |
| TGGAAGGTATAAGGAAGCGA+AGG | 0.636944 | 1.3:+27076402 | MS.gene68398:CDS |
| AGGTGTTAGCGAATTGATGG+AGG | 0.638521 | 1.3:+27077596 | MS.gene68398:CDS |
| TGTTGGTGCTGTAAACCCTA+GGG | 0.640534 | 1.3:+27075667 | MS.gene68398:CDS |
| CTGTGAAAGCCATAAATGAG+AGG | 0.642882 | 1.3:+27077355 | MS.gene68398:CDS |
| TAAAGAGCATCAATATGACC+CGG | 0.642930 | 1.3:-27076784 | None:intergenic |
| CCAAGGTTAACGTAAATCTG+TGG | 0.646831 | 1.3:-27076487 | None:intergenic |
| TAGGTTGAGTCGTTGTAATG+TGG | 0.652395 | 1.3:+27077185 | MS.gene68398:CDS |
| ATTCGACGCGAATCATGATG+GGG | 0.660251 | 1.3:+27075616 | MS.gene68398:CDS |
| GCGAACCGATAATAGGGTAG+CGG | 0.667482 | 1.3:-27077770 | None:intergenic |
| GTATTGTGTTCGATGAGACG+TGG | 0.668042 | 1.3:+27075987 | MS.gene68398:CDS |
| TGGAGTCGCAGAAGAAGCAG+CGG | 0.676108 | 1.3:+27075933 | MS.gene68398:CDS |
| TTCGACGCGAATCATGATGG+GGG | 0.686689 | 1.3:+27075617 | MS.gene68398:CDS |
| AATTCGCTAACACCTTGGGA+AGG | 0.689041 | 1.3:-27077588 | None:intergenic |
| AAAGAAGAACAAACCCAATG+GGG | 0.692654 | 1.3:+27077038 | MS.gene68398:CDS |
| CCGGTACCAGAATACGACAC+CGG | 0.720876 | 1.3:-27077243 | None:intergenic |
| ACAGGAGATAGAAACCGACA+TGG | 0.728698 | 1.3:+27077726 | MS.gene68398:CDS |
| TGCTTGTGAGTATTATAGGG+AGG | 0.742573 | 1.3:+27076543 | MS.gene68398:CDS |
| TTGGTGATAAGACTACTATG+AGG | 0.757906 | 1.3:+27077115 | MS.gene68398:CDS |
| GATTGTTGATGAGAGGATGG+CGG | 0.780366 | 1.3:+27075910 | MS.gene68398:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAACATAATAACAATTAC+CGG | - | chr1.3:27076383-27076402 | None:intergenic | 20.0% |
| !! | ATTGATGCTCTTTATAATTT+AGG | + | chr1.3:27076793-27076812 | MS.gene68398:CDS | 20.0% |
| !!! | ATTTAGAGATTTTGATAAAG+AGG | + | chr1.3:27076023-27076042 | MS.gene68398:CDS | 20.0% |
| ! | GTATGAACATCAATTGTTTA+AGG | + | chr1.3:27076291-27076310 | MS.gene68398:CDS | 25.0% |
| !! | AGCATTGAAAATGACAAATA+GGG | + | chr1.3:27076972-27076991 | MS.gene68398:CDS | 25.0% |
| !! | ATTGTTATTATGTTCTTGGA+AGG | + | chr1.3:27076386-27076405 | MS.gene68398:CDS | 25.0% |
| !! | GGTAATTGTTATTATGTTCT+TGG | + | chr1.3:27076382-27076401 | MS.gene68398:CDS | 25.0% |
| !!! | AAGCATTGAAAATGACAAAT+AGG | + | chr1.3:27076971-27076990 | MS.gene68398:CDS | 25.0% |
| !!! | TAATTTAGGTGGATTGTATA+TGG | + | chr1.3:27076807-27076826 | MS.gene68398:CDS | 25.0% |
| AAAAAGAAGAACAAACCCAA+TGG | + | chr1.3:27077036-27077055 | MS.gene68398:CDS | 30.0% | |
| AAAAGAAGAACAAACCCAAT+GGG | + | chr1.3:27077037-27077056 | MS.gene68398:CDS | 30.0% | |
| ACCATCAATAAATTCAGCAT+AGG | - | chr1.3:27075744-27075763 | None:intergenic | 30.0% | |
| ACCTATGCTGAATTTATTGA+TGG | + | chr1.3:27075740-27075759 | MS.gene68398:CDS | 30.0% | |
| AGAAAGAATCCTCTCATTTA+TGG | - | chr1.3:27077367-27077386 | None:intergenic | 30.0% | |
| GATGCTCTTTATAATTTAGG+TGG | + | chr1.3:27076796-27076815 | MS.gene68398:CDS | 30.0% | |
| GCTAAAGATGGGAAAATTAA+AGG | + | chr1.3:27076061-27076080 | MS.gene68398:CDS | 30.0% | |
| TCTTGATCTTAATGTTGATG+AGG | + | chr1.3:27075847-27075866 | MS.gene68398:CDS | 30.0% | |
| TGAACATCAATTGTTTAAGG+AGG | + | chr1.3:27076294-27076313 | MS.gene68398:CDS | 30.0% | |
| ! | ATTTAAGGAGTATGGAAATG+AGG | + | chr1.3:27077884-27077903 | MS.gene68398:CDS | 30.0% |
| ! | TATGTTTGATGATCCAGATT+GGG | + | chr1.3:27077668-27077687 | MS.gene68398:CDS | 30.0% |
| ! | TTATGTTCTTGGAAGGTATA+AGG | + | chr1.3:27076393-27076412 | MS.gene68398:CDS | 30.0% |
| ! | TTATGTTTGATGATCCAGAT+TGG | + | chr1.3:27077667-27077686 | MS.gene68398:CDS | 30.0% |
| ! | TTTAAGGAGTATGGAAATGA+GGG | + | chr1.3:27077885-27077904 | MS.gene68398:CDS | 30.0% |
| !! | CTTTCTGTTTTGGATGAAAA+TGG | + | chr1.3:27077381-27077400 | MS.gene68398:CDS | 30.0% |
| !! | CTTTTGAGAACTTATGATGA+TGG | + | chr1.3:27075788-27075807 | MS.gene68398:CDS | 30.0% |
| !! | TAATGTGGAGCTTTTGAAAA+AGG | + | chr1.3:27077200-27077219 | MS.gene68398:CDS | 30.0% |
| !! | TGAATTTATTGATGGTGAGA+GGG | + | chr1.3:27075748-27075767 | MS.gene68398:CDS | 30.0% |
| !!! | TGATTATGCTGTTTTTGTGA+AGG | + | chr1.3:27076183-27076202 | MS.gene68398:CDS | 30.0% |
| AAAGAAGAACAAACCCAATG+GGG | + | chr1.3:27077038-27077057 | MS.gene68398:CDS | 35.0% | |
| AACCTTGGTATTTCATTGGA+AGG | + | chr1.3:27076502-27076521 | MS.gene68398:CDS | 35.0% | |
| AAGTTGAAGCAAGCTAAAGA+TGG | + | chr1.3:27076049-27076068 | MS.gene68398:CDS | 35.0% | |
| AATTGCAACCTGTTGATGTT+AGG | + | chr1.3:27076344-27076363 | MS.gene68398:CDS | 35.0% | |
| AGTTGAAGCAAGCTAAAGAT+GGG | + | chr1.3:27076050-27076069 | MS.gene68398:CDS | 35.0% | |
| ATAATACCAAAACCCCAATC+TGG | - | chr1.3:27077684-27077703 | None:intergenic | 35.0% | |
| ATCACCAACTGTCTTAAACT+TGG | - | chr1.3:27077103-27077122 | None:intergenic | 35.0% | |
| CAGATACATCCAGTTGTTAA+GGG | + | chr1.3:27077554-27077573 | MS.gene68398:CDS | 35.0% | |
| CGAAGAATTTCTTCCAAGTT+CGG | - | chr1.3:27077294-27077313 | None:intergenic | 35.0% | |
| CGTTAACCTTGGTATTTCAT+TGG | + | chr1.3:27076498-27076517 | MS.gene68398:CDS | 35.0% | |
| GAGTACAGATTTAAGGAGTA+TGG | + | chr1.3:27077876-27077895 | MS.gene68398:CDS | 35.0% | |
| GAGTGCTTGTGAGTATTATA+GGG | + | chr1.3:27076540-27076559 | MS.gene68398:CDS | 35.0% | |
| GATGGTTCAACTATGACAAA+TGG | - | chr1.3:27077081-27077100 | None:intergenic | 35.0% | |
| GCAAGTACACTTATCTTTCA+TGG | - | chr1.3:27077916-27077935 | None:intergenic | 35.0% | |
| TCTTCCTGCTTAAATGTAGA+AGG | - | chr1.3:27077858-27077877 | None:intergenic | 35.0% | |
| TGAGTGCTTGTGAGTATTAT+AGG | + | chr1.3:27076539-27076558 | MS.gene68398:CDS | 35.0% | |
| TTTGATGCTTATTCTGATGC+TGG | + | chr1.3:27076091-27076110 | MS.gene68398:CDS | 35.0% | |
| ! | AGAAGCCAAAAAAGCTTTGA+AGG | + | chr1.3:27076948-27076967 | MS.gene68398:CDS | 35.0% |
| ! | ATGTTTGATGATCCAGATTG+GGG | + | chr1.3:27077669-27077688 | MS.gene68398:CDS | 35.0% |
| ! | TCAAGAGAAGAAGCTTTTGA+TGG | + | chr1.3:27076244-27076263 | MS.gene68398:CDS | 35.0% |
| ! | TGAGAGGATTCTTTCTGTTT+TGG | + | chr1.3:27077371-27077390 | MS.gene68398:CDS | 35.0% |
| ! | TGAGATGTATACGAGAGTTT+TGG | + | chr1.3:27076855-27076874 | MS.gene68398:CDS | 35.0% |
| ! | TTGGTGATAAGACTACTATG+AGG | + | chr1.3:27077115-27077134 | MS.gene68398:CDS | 35.0% |
| ! | TTTGATGGACATATGGCAAT+TGG | + | chr1.3:27076259-27076278 | MS.gene68398:CDS | 35.0% |
| !! | AAGGCTATTGATTTGAAACC+GGG | + | chr1.3:27076766-27076785 | MS.gene68398:CDS | 35.0% |
| !! | AGAAGCTTTTGATGGACATA+TGG | + | chr1.3:27076252-27076271 | MS.gene68398:CDS | 35.0% |
| !! | AGAGGCTATTTTCATGAAAC+CGG | + | chr1.3:27076663-27076682 | MS.gene68398:CDS | 35.0% |
| !! | AGGCTTTGATTAGTTTCAAG+AGG | + | chr1.3:27076314-27076333 | MS.gene68398:CDS | 35.0% |
| !! | CTGAATTTATTGATGGTGAG+AGG | + | chr1.3:27075747-27075766 | MS.gene68398:CDS | 35.0% |
| !! | CTTGCTTTAACTTGCAATCA+CGG | + | chr1.3:27077931-27077950 | MS.gene68398:CDS | 35.0% |
| !! | GAAGGCTATTGATTTGAAAC+CGG | + | chr1.3:27076765-27076784 | MS.gene68398:CDS | 35.0% |
| !! | GAATTTATTGATGGTGAGAG+GGG | + | chr1.3:27075749-27075768 | MS.gene68398:CDS | 35.0% |
| !! | GGCTTTGATTAGTTTCAAGA+GGG | + | chr1.3:27076315-27076334 | MS.gene68398:CDS | 35.0% |
| !! | GTTTTGGATGAAAATGGTTC+AGG | + | chr1.3:27077387-27077406 | MS.gene68398:CDS | 35.0% |
| !! | TAAAGAGCATCAATATGACC+CGG | - | chr1.3:27076787-27076806 | None:intergenic | 35.0% |
| !! | TTCAAAGCTCTAAAATGCGT+AGG | - | chr1.3:27076583-27076602 | None:intergenic | 35.0% |
| !! | TTTAGAGCTTTGAAACTGCT+AGG | + | chr1.3:27076589-27076608 | MS.gene68398:CDS | 35.0% |
| !!! | TGCTTCCTTCAAAGCTTTTT+TGG | - | chr1.3:27076956-27076975 | None:intergenic | 35.0% |
| AAATGAGGCCTAACATCAAC+AGG | - | chr1.3:27076355-27076374 | None:intergenic | 40.0% | |
| AATCAACGCAATTCTCGATG+AGG | + | chr1.3:27075709-27075728 | MS.gene68398:CDS | 40.0% | |
| AATTCGACGCGAATCATGAT+GGG | + | chr1.3:27075615-27075634 | MS.gene68398:CDS | 40.0% | |
| ACCTTAGTGAAGCTTGAAAC+AGG | + | chr1.3:27077708-27077727 | MS.gene68398:CDS | 40.0% | |
| AGTGCCTTCTACATTTAAGC+AGG | + | chr1.3:27077851-27077870 | MS.gene68398:CDS | 40.0% | |
| AGTTCTCAAAAGACCCTCAT+AGG | - | chr1.3:27075780-27075799 | None:intergenic | 40.0% | |
| ATCATGATTCGCGTCGAATT+GGG | - | chr1.3:27075615-27075634 | None:intergenic | 40.0% | |
| ATGACAAATGGCGATTCTTC+CGG | - | chr1.3:27077069-27077088 | None:intergenic | 40.0% | |
| ATGCTTATTCTGATGCTGGT+TGG | + | chr1.3:27076095-27076114 | MS.gene68398:CDS | 40.0% | |
| CAATGTGCATCAGCATAATC+CGG | - | chr1.3:27076685-27076704 | None:intergenic | 40.0% | |
| CACCTTCCAATGAAATACCA+AGG | - | chr1.3:27076507-27076526 | None:intergenic | 40.0% | |
| CATAAACAGCCCTTAACAAC+TGG | - | chr1.3:27077566-27077585 | None:intergenic | 40.0% | |
| CATCAATTCGCTAACACCTT+GGG | - | chr1.3:27077595-27077614 | None:intergenic | 40.0% | |
| CCAACTGTCTTAAACTTGGA+TGG | - | chr1.3:27077099-27077118 | None:intergenic | 40.0% | |
| CCAAGGTTAACGTAAATCTG+TGG | - | chr1.3:27076490-27076509 | None:intergenic | 40.0% | |
| CCACAGATTTACGTTAACCT+TGG | + | chr1.3:27076487-27076506 | MS.gene68398:CDS | 40.0% | |
| CCAGATACATCCAGTTGTTA+AGG | + | chr1.3:27077553-27077572 | MS.gene68398:CDS | 40.0% | |
| CCTTAACAACTGGATGTATC+TGG | - | chr1.3:27077556-27077575 | None:intergenic | 40.0% | |
| CTGTGAAAGCCATAAATGAG+AGG | + | chr1.3:27077355-27077374 | MS.gene68398:CDS | 40.0% | |
| GATTGTATATGGACTTGGGT+AGG | + | chr1.3:27076818-27076837 | MS.gene68398:CDS | 40.0% | |
| GGGTTTGAATAGGGAAGAAA+TGG | + | chr1.3:27075637-27075656 | MS.gene68398:CDS | 40.0% | |
| GGTATTTCATTGGAAGGTGA+AGG | + | chr1.3:27076508-27076527 | MS.gene68398:CDS | 40.0% | |
| GTTTCAAGCTTCACTAAGGT+AGG | - | chr1.3:27077708-27077727 | None:intergenic | 40.0% | |
| TAAAGCGCGAACCGATAATA+GGG | - | chr1.3:27077779-27077798 | None:intergenic | 40.0% | |
| TCCTGTTTCAAGCTTCACTA+AGG | - | chr1.3:27077712-27077731 | None:intergenic | 40.0% | |
| TCGAACACAATACCGTGATT+CGG | - | chr1.3:27075980-27075999 | None:intergenic | 40.0% | |
| TGAGATTTCGGATAAGAGAG+TGG | + | chr1.3:27076141-27076160 | MS.gene68398:CDS | 40.0% | |
| TGATAAGACTACTATGAGGC+AGG | + | chr1.3:27077119-27077138 | MS.gene68398:CDS | 40.0% | |
| TGCTTGTGAGTATTATAGGG+AGG | + | chr1.3:27076543-27076562 | MS.gene68398:CDS | 40.0% | |
| TTAAAGCGCGAACCGATAAT+AGG | - | chr1.3:27077780-27077799 | None:intergenic | 40.0% | |
| TTATCCGAAATCTCAGTCGA+AGG | - | chr1.3:27076136-27076155 | None:intergenic | 40.0% | |
| TTCATTGGAAGGTGAAGGTA+TGG | + | chr1.3:27076513-27076532 | MS.gene68398:CDS | 40.0% | |
| TTCGGATAAGAGAGTGGTTT+GGG | + | chr1.3:27076147-27076166 | MS.gene68398:CDS | 40.0% | |
| TTTCGGATAAGAGAGTGGTT+TGG | + | chr1.3:27076146-27076165 | MS.gene68398:CDS | 40.0% | |
| TTTCTTCCAAGTTCGGTTTC+CGG | - | chr1.3:27077287-27077306 | None:intergenic | 40.0% | |
| ! | AGCGAAGGAAGAGTTTTTGT+TGG | + | chr1.3:27076417-27076436 | MS.gene68398:CDS | 40.0% |
| ! | ATCATGATGGGGGTTTGAAT+AGG | + | chr1.3:27075627-27075646 | MS.gene68398:CDS | 40.0% |
| ! | CCATCCAAGTTTAAGACAGT+TGG | + | chr1.3:27077096-27077115 | MS.gene68398:CDS | 40.0% |
| ! | GATCTTAATGTTGATGAGGC+TGG | + | chr1.3:27075851-27075870 | MS.gene68398:CDS | 40.0% |
| ! | GCAGGAAGAGTACAGATTTA+AGG | + | chr1.3:27077869-27077888 | MS.gene68398:CDS | 40.0% |
| ! | GTTTTTGTGAAGGAAGTAGG+TGG | + | chr1.3:27076193-27076212 | MS.gene68398:CDS | 40.0% |
| ! | TAATGTTGATGAGGCTGGTA+AGG | + | chr1.3:27075856-27075875 | MS.gene68398:CDS | 40.0% |
| ! | TAGGTTGAGTCGTTGTAATG+TGG | + | chr1.3:27077185-27077204 | MS.gene68398:CDS | 40.0% |
| ! | TCATGATGGGGGTTTGAATA+GGG | + | chr1.3:27075628-27075647 | MS.gene68398:CDS | 40.0% |
| !! | AGAACTTATGATGATGGTGC+TGG | + | chr1.3:27075794-27075813 | MS.gene68398:CDS | 40.0% |
| !! | AGGTGGATTGTATATGGACT+TGG | + | chr1.3:27076813-27076832 | MS.gene68398:CDS | 40.0% |
| !! | CAATTACCGGCTCTAAAATG+AGG | - | chr1.3:27076370-27076389 | None:intergenic | 40.0% |
| !! | GGTGGATTGTATATGGACTT+GGG | + | chr1.3:27076814-27076833 | MS.gene68398:CDS | 40.0% |
| !! | TATTATCGGTTCGCGCTTTA+AGG | + | chr1.3:27077779-27077798 | MS.gene68398:CDS | 40.0% |
| !!! | GCTGTTTTTGTGAAGGAAGT+AGG | + | chr1.3:27076190-27076209 | MS.gene68398:CDS | 40.0% |
| AATGAGCGAACATGATGTGC+CGG | + | chr1.3:27077224-27077243 | MS.gene68398:CDS | 45.0% | |
| AATTCGCTAACACCTTGGGA+AGG | - | chr1.3:27077591-27077610 | None:intergenic | 45.0% | |
| ACAGGAGATAGAAACCGACA+TGG | + | chr1.3:27077726-27077745 | MS.gene68398:CDS | 45.0% | |
| AGGTGTTAGCGAATTGATGG+AGG | + | chr1.3:27077596-27077615 | MS.gene68398:CDS | 45.0% | |
| ATTAGCACCGTCTTCGTTCA+TGG | - | chr1.3:27077514-27077533 | None:intergenic | 45.0% | |
| ATTCGACGCGAATCATGATG+GGG | + | chr1.3:27075616-27075635 | MS.gene68398:CDS | 45.0% | |
| ATTCTTGCTCCCATTTGTGG+TGG | + | chr1.3:27077438-27077457 | MS.gene68398:CDS | 45.0% | |
| CAATTCGACGCGAATCATGA+TGG | + | chr1.3:27075614-27075633 | MS.gene68398:CDS | 45.0% | |
| CATCATGATTCGCGTCGAAT+TGG | - | chr1.3:27075616-27075635 | None:intergenic | 45.0% | |
| CATCGCTGAATTTCACCCTA+GGG | - | chr1.3:27075685-27075704 | None:intergenic | 45.0% | |
| CCATCAATTCGCTAACACCT+TGG | - | chr1.3:27077596-27077615 | None:intergenic | 45.0% | |
| GCTATTCTTGCTCCCATTTG+TGG | + | chr1.3:27077435-27077454 | MS.gene68398:CDS | 45.0% | |
| GCTGTTTATGTTCCTTCCCA+AGG | + | chr1.3:27077576-27077595 | MS.gene68398:CDS | 45.0% | |
| GGTTCAGGCAGATTAGATCT+TGG | + | chr1.3:27077402-27077421 | MS.gene68398:CDS | 45.0% | |
| GTATTGTGTTCGATGAGACG+TGG | + | chr1.3:27075987-27076006 | MS.gene68398:CDS | 45.0% | |
| TATACATCTCAGAAGCCCTC+TGG | - | chr1.3:27076846-27076865 | None:intergenic | 45.0% | |
| TCATCGCTGAATTTCACCCT+AGG | - | chr1.3:27075686-27075705 | None:intergenic | 45.0% | |
| TGAGGCTGGTGGAAATCAAT+GGG | + | chr1.3:27076453-27076472 | MS.gene68398:CDS | 45.0% | |
| TGCTGATGCACATTGTGATC+TGG | + | chr1.3:27076690-27076709 | MS.gene68398:CDS | 45.0% | |
| TGGAGACGTAGACACTTCAA+TGG | + | chr1.3:27077623-27077642 | MS.gene68398:CDS | 45.0% | |
| TGTAACCAATGCTACAGCGA+AGG | + | chr1.3:27077825-27077844 | MS.gene68398:CDS | 45.0% | |
| TTAGCACCGTCTTCGTTCAT+GGG | - | chr1.3:27077513-27077532 | None:intergenic | 45.0% | |
| TTTCGGCGTAGGGGAATATA+AGG | + | chr1.3:27076621-27076640 | MS.gene68398:CDS | 45.0% | |
| ! | AGAGTGGTTTGGGATGAATC+AGG | + | chr1.3:27076157-27076176 | MS.gene68398:CDS | 45.0% |
| ! | ATCCTTTTACGTCTCTCTGG+AGG | - | chr1.3:27077465-27077484 | None:intergenic | 45.0% |
| ! | CCAAGGTGTTAGCGAATTGA+TGG | + | chr1.3:27077593-27077612 | MS.gene68398:CDS | 45.0% |
| ! | CTGAAGCCAGACACTTTTCA+AGG | + | chr1.3:27077330-27077349 | MS.gene68398:CDS | 45.0% |
| ! | CTGCTAGGTAGTGCTCTTTT+CGG | + | chr1.3:27076604-27076623 | MS.gene68398:CDS | 45.0% |
| ! | CTTTTCCTTCGCTGTAGCAT+TGG | - | chr1.3:27077833-27077852 | None:intergenic | 45.0% |
| ! | GAGTGGTTTGGGATGAATCA+GGG | + | chr1.3:27076158-27076177 | MS.gene68398:CDS | 45.0% |
| ! | GATGATCCAGATTGGGGTTT+TGG | + | chr1.3:27077675-27077694 | MS.gene68398:CDS | 45.0% |
| ! | GATTGTTGATGAGAGGATGG+CGG | + | chr1.3:27075910-27075929 | MS.gene68398:CDS | 45.0% |
| ! | GCAAATCAGAGCACTTCAGA+AGG | + | chr1.3:27077158-27077177 | MS.gene68398:CDS | 45.0% |
| ! | GTCGATTGTTGATGAGAGGA+TGG | + | chr1.3:27075907-27075926 | MS.gene68398:CDS | 45.0% |
| ! | TGCACATTGTGATCTGGCTT+CGG | + | chr1.3:27076696-27076715 | MS.gene68398:CDS | 45.0% |
| ! | TGCTGTTAAAGCGCTTGAAG+AGG | + | chr1.3:27076645-27076664 | MS.gene68398:CDS | 45.0% |
| ! | TGGAAGGTATAAGGAAGCGA+AGG | + | chr1.3:27076402-27076421 | MS.gene68398:CDS | 45.0% |
| !! | ACAGCTCCTTGAAAAGTGTC+TGG | - | chr1.3:27077339-27077358 | None:intergenic | 45.0% |
| !! | ATGGTGCTGGTGATGTTGAT+AGG | + | chr1.3:27075807-27075826 | MS.gene68398:CDS | 45.0% |
| !! | GGTTTCCGGATGGATTTTTC+CGG | - | chr1.3:27077273-27077292 | None:intergenic | 45.0% |
| !! | TGGTGCTGGTGATGTTGATA+GGG | + | chr1.3:27075808-27075827 | MS.gene68398:CDS | 45.0% |
| !! | TGTTGGTGCTGTAAACCCTA+GGG | + | chr1.3:27075667-27075686 | MS.gene68398:CDS | 45.0% |
| !! | TTGTTGGTGCTGTAAACCCT+AGG | + | chr1.3:27075666-27075685 | MS.gene68398:CDS | 45.0% |
| !!! | ATACGAGAGTTTTGGCTGTG+TGG | + | chr1.3:27076863-27076882 | MS.gene68398:CDS | 45.0% |
| !!! | GTTAGGCCTCATTTTAGAGC+CGG | + | chr1.3:27076361-27076380 | MS.gene68398:CDS | 45.0% |
| ACGCCACAACAGTGCATCAA+AGG | - | chr1.3:27077490-27077509 | None:intergenic | 50.0% | |
| AGCGAATTGATGGAGGTTCG+TGG | + | chr1.3:27077603-27077622 | MS.gene68398:CDS | 50.0% | |
| ATCCATCCGGAAACCGAACT+TGG | + | chr1.3:27077278-27077297 | MS.gene68398:CDS | 50.0% | |
| ATGCTATGCGTGAGGATGAG+AGG | + | chr1.3:27076725-27076744 | MS.gene68398:CDS | 50.0% | |
| CAAACCCAATGGGGATACTC+CGG | + | chr1.3:27077047-27077066 | MS.gene68398:CDS | 50.0% | |
| CTGAGGCTGGTGGAAATCAA+TGG | + | chr1.3:27076452-27076471 | MS.gene68398:CDS | 50.0% | |
| GAAGAAATGGCGTCGCTTGT+TGG | + | chr1.3:27075650-27075669 | MS.gene68398:CDS | 50.0% | |
| GAGAGGGGTTTGACCTATGA+GGG | + | chr1.3:27075764-27075783 | MS.gene68398:CDS | 50.0% | |
| GAGCACTTCAGAAGGTTGCT+AGG | + | chr1.3:27077166-27077185 | MS.gene68398:CDS | 50.0% | |
| GCGAACCGATAATAGGGTAG+CGG | - | chr1.3:27077773-27077792 | None:intergenic | 50.0% | |
| GTCCTCCAGAGAGACGTAAA+AGG | + | chr1.3:27077460-27077479 | MS.gene68398:CDS | 50.0% | |
| TCGCCTTTGATGCACTGTTG+TGG | + | chr1.3:27077484-27077503 | MS.gene68398:CDS | 50.0% | |
| TCTGGAGGACCACCACAAAT+GGG | - | chr1.3:27077450-27077469 | None:intergenic | 50.0% | |
| TGAGAGGGGTTTGACCTATG+AGG | + | chr1.3:27075763-27075782 | MS.gene68398:CDS | 50.0% | |
| TGCTATGCGTGAGGATGAGA+GGG | + | chr1.3:27076726-27076745 | MS.gene68398:CDS | 50.0% | |
| TTCCAAGTTCGGTTTCCGGA+TGG | - | chr1.3:27077283-27077302 | None:intergenic | 50.0% | |
| TTCGACGCGAATCATGATGG+GGG | + | chr1.3:27075617-27075636 | MS.gene68398:CDS | 50.0% | |
| ! | AACAAGGCTGTGTCGTTGCT+GGG | + | chr1.3:27076910-27076929 | MS.gene68398:CDS | 50.0% |
| ! | CGTCGTCGATTGTTGATGAG+AGG | + | chr1.3:27075903-27075922 | MS.gene68398:CDS | 50.0% |
| ! | GCGATCCTTTTACGTCTCTC+TGG | - | chr1.3:27077468-27077487 | None:intergenic | 50.0% |
| ! | GGCGATTGAGGTGTTTCAGA+AGG | + | chr1.3:27076747-27076766 | MS.gene68398:CDS | 50.0% |
| ! | GTAGTGCTCTTTTCGGCGTA+GGG | + | chr1.3:27076611-27076630 | MS.gene68398:CDS | 50.0% |
| ! | GTGTGCCGCTACCCTATTAT+CGG | + | chr1.3:27077765-27077784 | MS.gene68398:CDS | 50.0% |
| ! | TAGTGCTCTTTTCGGCGTAG+GGG | + | chr1.3:27076612-27076631 | MS.gene68398:CDS | 50.0% |
| ! | TCTTCCGGAGTATCCCCATT+GGG | - | chr1.3:27077054-27077073 | None:intergenic | 50.0% |
| ! | TGCTCTGATTTGCAGAGCAC+TGG | - | chr1.3:27077151-27077170 | None:intergenic | 50.0% |
| ! | TTCTTCCGGAGTATCCCCAT+TGG | - | chr1.3:27077055-27077074 | None:intergenic | 50.0% |
| !! | CGCACATGGTTTTGCCATGT+CGG | - | chr1.3:27077743-27077762 | None:intergenic | 50.0% |
| !! | GAGTGCCGGAAAAATCCATC+CGG | + | chr1.3:27077265-27077284 | MS.gene68398:CDS | 50.0% |
| !! | GATGGATTTTTCCGGCACTC+CGG | - | chr1.3:27077265-27077284 | None:intergenic | 50.0% |
| AACTGCGCCCGCCAATGATT+CGG | - | chr1.3:27076889-27076908 | None:intergenic | 55.0% | |
| CCGGTACCAGAATACGACAC+CGG | - | chr1.3:27077246-27077265 | None:intergenic | 55.0% | |
| CTGTGTGGCCGAATCATTGG+CGG | + | chr1.3:27076878-27076897 | MS.gene68398:CDS | 55.0% | |
| GGACTTGGGTAGGTTCCAGA+GGG | + | chr1.3:27076828-27076847 | MS.gene68398:CDS | 55.0% | |
| GGCTTTGCATGCTATGCGTG+AGG | + | chr1.3:27076717-27076736 | MS.gene68398:CDS | 55.0% | |
| GGGGCCTTCGACTGAGATTT+CGG | + | chr1.3:27076129-27076148 | MS.gene68398:CDS | 55.0% | |
| GTTGGCACTTGAAGCTGCTG+AGG | + | chr1.3:27076435-27076454 | MS.gene68398:CDS | 55.0% | |
| TGAGGATGAGAGGGCGATTG+AGG | + | chr1.3:27076735-27076754 | MS.gene68398:CDS | 55.0% | |
| TGATGAGGCTGGTAAGGCTC+CGG | + | chr1.3:27075862-27075881 | MS.gene68398:CDS | 55.0% | |
| TGGACTTGGGTAGGTTCCAG+AGG | + | chr1.3:27076827-27076846 | MS.gene68398:CDS | 55.0% | |
| TGGAGTCGCAGAAGAAGCAG+CGG | + | chr1.3:27075933-27075952 | MS.gene68398:CDS | 55.0% | |
| TGGCGTCCCATGAACGAAGA+CGG | + | chr1.3:27077504-27077523 | MS.gene68398:CDS | 55.0% | |
| TGGCTGTGTGGCCGAATCAT+TGG | + | chr1.3:27076875-27076894 | MS.gene68398:CDS | 55.0% | |
| TGTGTGGCCGAATCATTGGC+GGG | + | chr1.3:27076879-27076898 | MS.gene68398:CDS | 55.0% | |
| ! | CTCTGGAGGACCACCACAAA+TGG | - | chr1.3:27077451-27077470 | None:intergenic | 55.0% |
| ! | GAACAAGGCTGTGTCGTTGC+TGG | + | chr1.3:27076909-27076928 | MS.gene68398:CDS | 55.0% |
| ! | GGTAGTGCTCTTTTCGGCGT+AGG | + | chr1.3:27076610-27076629 | MS.gene68398:CDS | 55.0% |
| ! | GTATTCTGGTACCGGAGTGC+CGG | + | chr1.3:27077251-27077270 | MS.gene68398:CDS | 55.0% |
| ! | TGTTGATGAGAGGATGGCGG+TGG | + | chr1.3:27075913-27075932 | MS.gene68398:CDS | 55.0% |
| !! | AAGAGGCACCAGATCGGAGA+AGG | + | chr1.3:27075574-27075593 | MS.gene68398:CDS | 55.0% |
| !! | CCGGTGTCGTATTCTGGTAC+CGG | + | chr1.3:27077243-27077262 | MS.gene68398:CDS | 55.0% |
| !! | CTGGTTGGTCTCGCGAATTG+GGG | + | chr1.3:27076110-27076129 | MS.gene68398:CDS | 55.0% |
| !! | GATGTGCCGGTGTCGTATTC+TGG | + | chr1.3:27077237-27077256 | MS.gene68398:CDS | 55.0% |
| !! | GCTGGTTGGTCTCGCGAATT+GGG | + | chr1.3:27076109-27076128 | MS.gene68398:CDS | 55.0% |
| !! | TGCTGGTTGGTCTCGCGAAT+TGG | + | chr1.3:27076108-27076127 | MS.gene68398:CDS | 55.0% |
| CTTGAAGCTGCTGAGGCTGG+TGG | + | chr1.3:27076442-27076461 | MS.gene68398:CDS | 60.0% | |
| GACGACGAAGCCTCCGAATC+CGG | - | chr1.3:27075890-27075909 | None:intergenic | 60.0% | |
| GCACTTGAAGCTGCTGAGGC+TGG | + | chr1.3:27076439-27076458 | MS.gene68398:CDS | 60.0% | |
| TCGTCGCACCTTCTCCGATC+TGG | - | chr1.3:27075585-27075604 | None:intergenic | 60.0% | |
| TGGGCAGTGTCGCCGAATCA+CGG | + | chr1.3:27075965-27075984 | MS.gene68398:CDS | 60.0% | |
| ! | TTGGCGGGCGCAGTTGAACA+AGG | + | chr1.3:27076894-27076913 | MS.gene68398:CDS | 60.0% |
| !! | GGCGACAAGAGGCACCAGAT+CGG | + | chr1.3:27075568-27075587 | MS.gene68398:CDS | 60.0% |
| AGAAGCAGCGGACAGCTGCG+TGG | + | chr1.3:27075945-27075964 | MS.gene68398:CDS | 65.0% | |
| GAAGCAGCGGACAGCTGCGT+GGG | + | chr1.3:27075946-27075965 | MS.gene68398:CDS | 65.0% | |
| GTAGCGGCACACTGCGCACA+TGG | - | chr1.3:27077757-27077776 | None:intergenic | 65.0% | |
| ! | GCTGTGTCGTTGCTGGGAGC+TGG | + | chr1.3:27076916-27076935 | MS.gene68398:CDS | 65.0% |
| ! | TAAGGCTCCGGCGCCGGATT+CGG | + | chr1.3:27075874-27075893 | MS.gene68398:CDS | 65.0% |
| GAAGCCTCCGAATCCGGCGC+CGG | - | chr1.3:27075884-27075903 | None:intergenic | 70.0% | |
| GGCTGGTAAGGCTCCGGCGC+CGG | + | chr1.3:27075868-27075887 | MS.gene68398:CDS | 75.0% | |
| !! | GGCTCCGGCGCCGGATTCGG+AGG | + | chr1.3:27075877-27075896 | MS.gene68398:CDS | 80.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 27075566 | 27077965 | 27075566 | ID=MS.gene68398 |
| chr1.3 | mRNA | 27075566 | 27077965 | 27075566 | ID=MS.gene68398.t1;Parent=MS.gene68398 |
| chr1.3 | exon | 27075566 | 27077965 | 27075566 | ID=MS.gene68398.t1.exon1;Parent=MS.gene68398.t1 |
| chr1.3 | CDS | 27075566 | 27077965 | 27075566 | ID=cds.MS.gene68398.t1;Parent=MS.gene68398.t1 |
| Gene Sequence |
| Protein sequence |
