AlfalfaGEDB | MS.gene00644

M. sativa cultivar XinJiangDaYe / MS.gene00644

KEGG: K21867
GO: GO:0003674 GO:0005215 GO:0005216 GO:0005244 GO:0005249 GO:0005261 GO:0005267 GO:0005488 GO:0005515 GO:0005575 GO:0006810 GO:0006811 GO:0006812 GO:0006813 GO:0008150 GO:0008324 GO:0015075 GO:0015077 GO:0015079 GO:0015267 GO:0015318 GO:0015672 GO:0016020 GO:0022803 GO:0022832 GO:0022836 GO:0022843 GO:0022857 GO:0022890 GO:0030001 GO:0046873 GO:0051179 GO:0051234 GO:0055085 GO:0110165
PFAM: PF00027.32 PF00520.34 PF11834.11 PF12796.10

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene00644.t1	XP_003593018.1	96.3	830	28	1	1	827	1	830	0.00E+00	1592

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene00644.t1	Q38898	68.1	825	218	8	12	825	11	801	8.2e-313	1074.3

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene00644.t1	G7IPF9	96.3	830	28	1	1	827	1	830	0.0e+00	1592.0

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR

PPI:

Gene1	Gene2	Type
MS.gene00644	MS.gene88755	PPI
MS.gene067862	MS.gene00644	PPI
MS.gene042471	MS.gene00644	PPI
MS.gene53552	MS.gene00644	PPI
MS.gene00644	MS.gene44868	PPI
MS.gene00644	MS.gene004367	PPI
MS.gene68398	MS.gene00644	PPI
MS.gene41781	MS.gene00644	PPI
MS.gene43594	MS.gene00644	PPI
MS.gene00644	MS.gene05802	PPI
MS.gene00644	MS.gene073921	PPI
MS.gene08159	MS.gene00644	PPI
MS.gene71028	MS.gene00644	PPI
MS.gene43767	MS.gene00644	PPI
MS.gene00644	MS.gene002687	PPI
MS.gene00644	MS.gene009913	PPI

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene00644.t1	MTR_2g006870	96.506	830	26	2	1	827	1	830	0.0	1668
MS.gene00644.t1	MTR_4g113530	48.006	652	329	5	44	689	28	675	0.0	633
MS.gene00644.t1	MTR_3g107720	40.428	747	408	11	45	779	47	768	0.0	560
MS.gene00644.t1	MTR_1g011755	37.967	856	452	17	16	818	6	835	0.0	552
MS.gene00644.t1	MTR_2g019530	52.743	474	221	3	40	512	29	500	5.16e-178	531
MS.gene00644.t1	MTR_8g446430	49.084	491	239	3	44	525	22	510	1.10e-167	502
MS.gene00644.t1	MTR_3g108320	45.545	505	266	5	36	532	17	520	1.67e-146	442
MS.gene00644.t1	MTR_3g108320	45.545	505	266	5	36	532	17	520	2.79e-146	442
MS.gene00644.t1	MTR_3g108320	45.635	504	265	5	36	531	17	519	7.76e-146	443
MS.gene00644.t1	MTR_5g077770	31.202	782	492	15	61	824	81	834	1.22e-117	376
MS.gene00644.t1	MTR_8g046440	50.735	272	134	0	236	507	11	282	2.19e-92	293
MS.gene00644.t1	MTR_1g040590	33.684	285	170	5	194	474	9	278	5.91e-42	155
MS.gene00644.t1	MTR_0279s0030	31.600	250	155	6	70	318	11	245	8.26e-28	116
MS.gene00644.t1	MTR_4g113370	32.195	205	137	1	286	488	5	209	7.95e-27	110
MS.gene00644.t1	MTR_0279s0030	32.215	149	93	3	170	318	40	180	2.48e-17	84.3
MS.gene00644.t1	MTR_4g113390	28.899	218	139	7	55	264	12	221	1.84e-16	79.7
MS.gene00644.t1	MTR_5g022220	69.811	53	13	1	256	305	14	66	6.73e-16	77.4
MS.gene00644.t1	MTR_8g027755	24.444	315	200	8	166	459	267	564	9.63e-16	82.0
MS.gene00644.t1	MTR_1g064240	20.000	485	308	12	103	514	122	599	2.34e-15	80.9
MS.gene00644.t1	MTR_1g028370	19.963	541	341	15	58	514	79	611	2.44e-15	80.9
MS.gene00644.t1	MTR_3g091080	20.497	483	303	14	105	514	135	609	3.02e-15	80.5
MS.gene00644.t1	MTR_0279s0030	36.082	97	61	1	222	318	1	96	1.15e-14	74.7
MS.gene00644.t1	MTR_6g027840	27.907	215	108	6	509	689	255	456	7.08e-13	72.4
MS.gene00644.t1	MTR_1g089180	29.605	152	97	1	541	692	261	402	8.58e-13	72.0
MS.gene00644.t1	MTR_7g115280	32.075	159	101	3	530	682	114	271	3.84e-12	69.7
MS.gene00644.t1	MTR_4g130820	23.497	183	139	1	259	440	374	556	4.20e-12	70.5
MS.gene00644.t1	MTR_4g020720	41.975	81	46	1	445	525	14	93	1.02e-11	66.6
MS.gene00644.t1	MTR_5g043640	31.677	161	108	2	509	667	66	226	2.98e-11	65.1

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene00644.t1	AT4G22200	68.364	825	216	8	12	825	11	801	0.0	1129
MS.gene00644.t1	AT4G22200	73.730	571	135	6	12	570	11	578	0.0	858
MS.gene00644.t1	AT2G26650	41.444	859	434	12	22	824	12	857	0.0	662
MS.gene00644.t1	AT4G32500	39.863	873	457	12	10	822	14	878	0.0	626
MS.gene00644.t1	AT2G25600	45.549	674	348	7	27	689	35	700	0.0	605
MS.gene00644.t1	AT2G26650	40.999	761	384	10	120	824	1	752	0.0	579
MS.gene00644.t1	AT5G46240	47.810	548	274	4	40	587	29	564	2.38e-178	529
MS.gene00644.t1	AT4G18290	52.599	481	226	2	40	520	29	507	2.56e-174	519
MS.gene00644.t1	AT4G18290	52.599	481	226	2	40	520	40	518	4.99e-174	519
MS.gene00644.t1	AT4G32650	46.791	483	253	4	36	515	51	532	1.24e-136	421
MS.gene00644.t1	AT4G32650	46.791	483	253	4	36	515	51	532	1.35e-136	421
MS.gene00644.t1	AT4G32650	46.791	483	253	4	36	515	51	532	2.01e-136	418
MS.gene00644.t1	AT5G37500	32.866	785	486	17	61	826	56	818	2.22e-127	402
MS.gene00644.t1	AT5G37500	31.970	807	486	18	61	826	56	840	3.93e-122	388
MS.gene00644.t1	AT3G02850	31.626	781	496	16	58	823	70	827	1.37e-120	384
MS.gene00644.t1	AT5G37500	31.955	798	480	18	70	826	11	786	1.52e-120	383
MS.gene00644.t1	AT3G02850	33.851	644	405	10	58	689	70	704	4.80e-116	370
MS.gene00644.t1	AT5G37500	33.934	666	391	14	61	689	56	709	1.16e-112	360
MS.gene00644.t1	AT3G02850	34.667	525	322	10	58	570	70	585	2.31e-95	310
MS.gene00644.t1	AT2G23980	23.497	183	139	1	259	440	382	564	8.10e-13	72.8
MS.gene00644.t1	AT2G23980	23.497	183	139	1	259	440	382	564	8.10e-13	72.8
MS.gene00644.t1	AT2G23980	23.497	183	139	1	259	440	382	564	8.10e-13	72.8
MS.gene00644.t1	AT2G23980	23.497	183	139	1	259	440	382	564	8.10e-13	72.8
MS.gene00644.t1	AT2G23980	23.497	183	139	1	259	440	382	564	8.10e-13	72.8
MS.gene00644.t1	AT5G57940	23.913	184	139	1	258	440	358	541	8.52e-13	72.8
MS.gene00644.t1	AT5G57940	23.913	184	139	1	258	440	365	548	8.58e-13	72.8
MS.gene00644.t1	AT5G57940	23.913	184	139	1	258	440	365	548	8.58e-13	72.8
MS.gene00644.t1	AT2G23980	23.497	183	139	1	259	440	355	537	9.14e-13	72.4
MS.gene00644.t1	AT2G23980	23.497	183	139	1	259	440	405	587	1.01e-12	72.4
MS.gene00644.t1	AT2G23980	23.497	183	139	1	259	440	405	587	1.01e-12	72.4
MS.gene00644.t1	AT2G23980	23.497	183	139	1	259	440	405	587	1.01e-12	72.4
MS.gene00644.t1	AT2G23980	23.497	183	139	1	259	440	405	587	1.01e-12	72.4
MS.gene00644.t1	AT4G30560	23.039	204	154	2	259	459	381	584	2.44e-12	71.2
MS.gene00644.t1	AT4G30560	23.039	204	154	2	259	459	381	584	2.44e-12	71.2
MS.gene00644.t1	AT4G30560	23.039	204	154	2	259	459	355	558	2.44e-12	71.2
MS.gene00644.t1	AT4G30560	23.039	204	154	2	259	459	355	558	2.44e-12	71.2
MS.gene00644.t1	AT4G30560	23.039	204	154	2	259	459	355	558	2.44e-12	71.2
MS.gene00644.t1	AT5G53130	21.212	264	194	6	259	514	354	611	8.27e-12	69.3
MS.gene00644.t1	AT2G46430	21.970	264	194	5	259	516	345	602	1.26e-11	68.9
MS.gene00644.t1	AT2G46430	21.970	264	194	5	259	516	345	602	1.26e-11	68.9
MS.gene00644.t1	AT1G19780	21.569	204	157	2	259	459	165	368	1.99e-11	67.8
MS.gene00644.t1	AT1G15990	21.569	204	157	2	259	459	370	573	3.35e-11	67.4
MS.gene00644.t1	AT1G19780	21.569	204	157	2	259	459	376	579	4.17e-11	67.4
MS.gene00644.t1	AT2G28260	21.970	264	192	6	259	514	339	596	7.44e-11	66.2
MS.gene00644.t1	AT2G28260	21.970	264	192	6	259	514	299	556	9.98e-11	65.9

Find 125 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TCTTAGGAATGCTCAGATTT+TGG	0.159603	2.1:+75541812	MS.gene00644:CDS
ACATCAGGTTCAGCTATTTC+TGG	0.198095	2.1:+75541961	MS.gene00644:CDS
ACAATATATAGTTTCCTATT+TGG	0.215703	2.1:-75538654	None:intergenic
TTACATGTGTTTGAGATTTA+AGG	0.223816	2.1:+75542617	MS.gene00644:CDS
GATATATTTCGGCTATTTAT+TGG	0.227129	2.1:+75542234	MS.gene00644:CDS
TTTGAGTATCAAAGATTTAA+TGG	0.236263	2.1:+75543465	MS.gene00644:CDS
CATCTTCATCTTTCAATCTA+AGG	0.250699	2.1:+75537693	MS.gene00644:CDS
AAGAAGAACAGAAGCAGATT+TGG	0.263100	2.1:+75544525	MS.gene00644:CDS
GCCTAGTGAGTATGTATTAA+AGG	0.268009	2.1:+75544493	MS.gene00644:CDS
TTGAAGCTGGAAAGTTAATA+AGG	0.269326	2.1:+75544627	MS.gene00644:CDS
TCATGCACTCTTCTCCAAAT+AGG	0.277810	2.1:+75538640	MS.gene00644:CDS
CCTCTTTCTCTTCTCACTAC+TGG	0.287529	2.1:-75544599	None:intergenic
ACCTTGGAGGCAACCGATTT+CGG	0.300414	2.1:-75542575	None:intergenic
CAGAATTCAGTTTGCTCAAA+AGG	0.301833	2.1:+75537758	MS.gene00644:CDS
ACATGCAACATACATATAAA+AGG	0.309366	2.1:+75544015	MS.gene00644:CDS
CCCTCGGATTAGATATATTT+CGG	0.310670	2.1:+75542223	MS.gene00644:CDS
AGTCTACCTTACTACCTCTT+AGG	0.314962	2.1:+75541796	MS.gene00644:CDS
TTGAGCTTCTCTAATGAATC+AGG	0.315266	2.1:-75544653	None:intergenic
AGAAGAACAGAAGCAGATTT+GGG	0.323990	2.1:+75544526	MS.gene00644:CDS
CAAAACATCACTCAATATTC+AGG	0.328587	2.1:+75544156	MS.gene00644:CDS
TGCATGATTACATCCTCTTT+AGG	0.345609	2.1:-75543067	None:intergenic
GGGCTTGTCTCTCTGAAGTT+TGG	0.349117	2.1:-75542203	None:intergenic
GGCCTAACTGCTTACTTGAT+TGG	0.352928	2.1:+75542353	MS.gene00644:CDS
GCAGCATTTCAAGCAGCTTA+AGG	0.358860	2.1:+75543441	MS.gene00644:intron
CAGATTTGGGGAAGATATAA+TGG	0.360704	2.1:+75544539	MS.gene00644:CDS
TTCTTCGTCGCATACGTAGA+TGG	0.370898	2.1:+75538723	MS.gene00644:CDS
AAGTTGGTGCACTTTGTTGT+AGG	0.381347	2.1:+75543206	MS.gene00644:CDS
TTCTACATGCTCTTCAACCT+TGG	0.382767	2.1:+75542332	MS.gene00644:CDS
AACAAATTCACAGCCATGTT+AGG	0.383420	2.1:-75543511	None:intergenic
CAGAAGCTGTGTTAGAGTCT+TGG	0.386691	2.1:-75543251	None:intergenic
GAGAAGCTCAAAATTATTGC+AGG	0.389605	2.1:+75544665	MS.gene00644:CDS
ATTCTGCAGAAACGCGAAAT+CGG	0.389644	2.1:+75544443	MS.gene00644:CDS
CTAACAACTGGAGACATGTT+TGG	0.390676	2.1:+75543181	MS.gene00644:CDS
CTGCAGAATTTCATTTAAGA+TGG	0.391532	2.1:-75544429	None:intergenic
CATCAGGTTCAGCTATTTCT+GGG	0.410742	2.1:+75541962	MS.gene00644:CDS
GGAGCTTCTAAGAGCTGGTT+TGG	0.417673	2.1:+75543570	MS.gene00644:CDS
CAGCACATAGCTGCATCAAA+TGG	0.427788	2.1:+75543958	MS.gene00644:intron
ATGACAAATCTTGTTGTTGA+AGG	0.429751	2.1:+75542380	MS.gene00644:CDS
ACTATACCATATGAAGCAAT+AGG	0.431353	2.1:+75541745	MS.gene00644:CDS
GAAAGAGGTTTCATTGAAGC+TGG	0.432526	2.1:+75544614	MS.gene00644:CDS
CTCGAGGAGCTTCTAAGAGC+TGG	0.442942	2.1:+75543565	MS.gene00644:CDS
AAGTAGCCTATTGCTTCATA+TGG	0.443165	2.1:-75541751	None:intergenic
CATTGCTTCTATAAGATCAC+TGG	0.444377	2.1:-75543284	None:intergenic
AGCATTCCTAAGAGGTAGTA+AGG	0.447195	2.1:-75541802	None:intergenic
CTCTTTCTCTTCTCACTACT+GGG	0.447423	2.1:-75544598	None:intergenic
AATAATCTTCTTTAACATCA+TGG	0.450043	2.1:-75537664	None:intergenic
AATCTCTTACTAGGGACAAA+AGG	0.450352	2.1:-75542767	None:intergenic
CTTGTCAACATGGTTCCTAA+TGG	0.452648	2.1:+75541711	MS.gene00644:CDS
TAGTTGATGCCACATCCATT+AGG	0.456566	2.1:-75541726	None:intergenic
ACTAAAATATAAACATCATC+TGG	0.457707	2.1:-75543100	None:intergenic
TTTGGTAGCTTATTCTGCAT+GGG	0.460459	2.1:+75538596	MS.gene00644:CDS
CCTCTATATATGCTTACTCT+TGG	0.468020	2.1:-75544572	None:intergenic
AGGAGATTGCCTGCTGTGTA+TGG	0.474283	2.1:-75544209	None:intergenic
ATTCAGTTTGCTCAAAAGGC+TGG	0.475995	2.1:+75537762	MS.gene00644:CDS
AAAAGCAGCATTGCCCGTGC+TGG	0.477728	2.1:-75543542	None:intergenic
ATGCCTTTGCAAATTGACTT+TGG	0.487312	2.1:-75542678	None:intergenic
CACCAATGGATTCTAGATAC+AGG	0.487320	2.1:+75537792	MS.gene00644:CDS
CATGAAGGAAAGACATGGAT+TGG	0.492441	2.1:+75542170	MS.gene00644:CDS
TTGTTAACTGTGGCCAGCAC+GGG	0.493877	2.1:+75543529	MS.gene00644:CDS
AGATAGACTTTCTCTACAGT+TGG	0.494483	2.1:-75542720	None:intergenic
AAGCTCATTCTTCCACCACT+TGG	0.499728	2.1:+75537725	MS.gene00644:CDS
AGATTTAATGGTGGAAAATG+TGG	0.502148	2.1:+75543477	MS.gene00644:CDS
ATCTCAAACACATGTAAGCC+AGG	0.506236	2.1:-75542611	None:intergenic
ATCCATGTCTTTCCTTCATG+AGG	0.507560	2.1:-75542167	None:intergenic
TGCATGAAAGCAACTTCAAA+GGG	0.510447	2.1:-75538624	None:intergenic
GTTCAGTTGCTTGTCATGAA+CGG	0.510748	2.1:+75544365	MS.gene00644:CDS
AAAATCTGAGCATTCCTAAG+AGG	0.515366	2.1:-75541810	None:intergenic
GCCGAAATCGGTTGCCTCCA+AGG	0.520226	2.1:+75542574	MS.gene00644:CDS
CAATAATTGGCAGATATGAA+TGG	0.520868	2.1:+75544104	MS.gene00644:intron
TGAATGGTGACACTGCACTA+TGG	0.520997	2.1:+75544120	MS.gene00644:CDS
AATAATGAAAATCATTTCCA+TGG	0.522992	2.1:-75542309	None:intergenic
AGCACATAGCTGCATCAAAT+GGG	0.523495	2.1:+75543959	MS.gene00644:intron
ACCATGACAACTGTTGGTTA+TGG	0.524484	2.1:+75542266	MS.gene00644:CDS
GTGACATACAGAAAGAAGTC+TGG	0.527667	2.1:-75541994	None:intergenic
CCAGTAGTGAGAAGAGAAAG+AGG	0.530706	2.1:+75544599	MS.gene00644:CDS
GCTGGTTTGGATCCTGACAT+TGG	0.531546	2.1:+75543583	MS.gene00644:CDS
GGAGACATGTTTGGAGAAGT+TGG	0.533278	2.1:+75543190	MS.gene00644:CDS
TATCAGCTAGCATGTAATAG+AGG	0.535299	2.1:-75542139	None:intergenic
AGTAATTCTTACAAATTCCA+TGG	0.539012	2.1:-75542414	None:intergenic
AGAGTACATACCACCTAAAG+AGG	0.540424	2.1:+75543054	MS.gene00644:CDS
GAGAAAGTCTATCTCTTCAA+AGG	0.541403	2.1:+75542729	MS.gene00644:CDS
GTGCATGAAAGCAACTTCAA+AGG	0.548004	2.1:-75538625	None:intergenic
AAAGAGCAGATAGCTGATAG+AGG	0.548443	2.1:-75544181	None:intergenic
AAGGTTAAAAGAGCAGATCC+TGG	0.552115	2.1:+75542593	MS.gene00644:CDS
GCAGGCTTGAGAAAGACATC+AGG	0.553572	2.1:+75541946	MS.gene00644:intron
TTTGTTAACTGTGGCCAGCA+CGG	0.553820	2.1:+75543528	MS.gene00644:CDS
CTTTCTGATCCATACACAGC+AGG	0.558919	2.1:+75544200	MS.gene00644:CDS
AACAGTTGTCATGGTAGTGA+TGG	0.561364	2.1:-75542258	None:intergenic
AGGCTGGATCATATCACCAA+TGG	0.568421	2.1:+75537778	MS.gene00644:CDS
GACAGCTATCCAAATTGCTA+TGG	0.571064	2.1:+75544322	MS.gene00644:CDS
AAATAGGAAACTATATATTG+TGG	0.571721	2.1:+75538656	MS.gene00644:CDS
ATCACTACCATGACAACTGT+TGG	0.583381	2.1:+75542260	MS.gene00644:CDS
ACCATAACCAACAGTTGTCA+TGG	0.583525	2.1:-75542267	None:intergenic
GCCGAAATATATCTAATCCG+AGG	0.586677	2.1:-75542224	None:intergenic
ATGATTACATCCTCTTTAGG+TGG	0.587618	2.1:-75543064	None:intergenic
GCTGATATGTACCCTCATGA+AGG	0.587871	2.1:+75542155	MS.gene00644:CDS
ACAATGGTGACAAATGAAGA+AGG	0.595250	2.1:+75545012	MS.gene00644:CDS
TACCTGTATCTAGAATCCAT+TGG	0.598520	2.1:-75537794	None:intergenic
TCAAGTAAGCAGTTAGGCCA+AGG	0.601963	2.1:-75542349	None:intergenic
CCGAAATATATCTAATCCGA+GGG	0.602786	2.1:-75542223	None:intergenic
CCAAGAGTAAGCATATATAG+AGG	0.605074	2.1:+75544572	MS.gene00644:CDS
GAGTATCAAAGATTTAATGG+TGG	0.606579	2.1:+75543468	MS.gene00644:CDS
GGCAGAAAATCATGTGGACA+TGG	0.607182	2.1:+75544343	MS.gene00644:CDS
TCCATGTCTTTCCTTCATGA+GGG	0.608602	2.1:-75542166	None:intergenic
TGCTATGGCAGAAAATCATG+TGG	0.613651	2.1:+75544337	MS.gene00644:CDS
GGAGGAAGACGATCCTAACA+TGG	0.626905	2.1:+75543498	MS.gene00644:CDS
TAATACATACTCACTAGGCA+TGG	0.628449	2.1:-75544489	None:intergenic
AACATGGTTCCTAATGGATG+TGG	0.629876	2.1:+75541717	MS.gene00644:CDS
TACCAATCAAGTAAGCAGTT+AGG	0.631238	2.1:-75542355	None:intergenic
ACCTTTAATACATACTCACT+AGG	0.632039	2.1:-75544494	None:intergenic
ATGCTAGAGTCTAAGTCATG+AGG	0.634864	2.1:-75537629	None:intergenic
CTACCAAAGTCAATTTGCAA+AGG	0.635237	2.1:+75542675	MS.gene00644:CDS
GTGTCAAGCAATTCTTCACA+AGG	0.635692	2.1:+75541845	MS.gene00644:CDS
GAGACAGGTACTTGTCAACA+TGG	0.642538	2.1:+75541701	MS.gene00644:intron
TTTAATGGTGGAAAATGTGG+AGG	0.648940	2.1:+75543480	MS.gene00644:CDS
GTTCTGTATGTAAAACTCTG+AGG	0.652805	2.1:-75543229	None:intergenic
TGAAGGAACTCGTCGCACCA+TGG	0.655001	2.1:+75542397	MS.gene00644:CDS
ACATCTAATTAATGTGAGTG+AGG	0.655673	2.1:+75544466	MS.gene00644:CDS
GAAGAACAGAAGCAGATTTG+GGG	0.656031	2.1:+75544527	MS.gene00644:CDS
GTTTGATGCAAAAGATACAA+TGG	0.657320	2.1:+75544996	MS.gene00644:CDS
TCTTCATGCTGTCAACACCA+TGG	0.661096	2.1:+75542292	MS.gene00644:CDS
GGCTGTGAATTTGTTAACTG+TGG	0.662660	2.1:+75543519	MS.gene00644:CDS
ACTTCAGAGAGACAAGCCCT+CGG	0.672053	2.1:+75542207	MS.gene00644:CDS
ACCCTCATGAAGGAAAGACA+TGG	0.681708	2.1:+75542165	MS.gene00644:CDS
ATTGACTCAAAAGATCGACA+TGG	0.721906	2.1:+75544296	MS.gene00644:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr2.1	gene	75537602	75545110	75537602	ID=MS.gene00644
chr2.1	mRNA	75537602	75545110	75537602	ID=MS.gene00644.t1;Parent=MS.gene00644
chr2.1	exon	75537602	75537813	75537602	ID=MS.gene00644.t1.exon1;Parent=MS.gene00644.t1
chr2.1	CDS	75537602	75537813	75537602	ID=cds.MS.gene00644.t1;Parent=MS.gene00644.t1
chr2.1	exon	75538572	75538790	75538572	ID=MS.gene00644.t1.exon2;Parent=MS.gene00644.t1
chr2.1	CDS	75538572	75538790	75538572	ID=cds.MS.gene00644.t1;Parent=MS.gene00644.t1
chr2.1	exon	75541708	75541866	75541708	ID=MS.gene00644.t1.exon3;Parent=MS.gene00644.t1
chr2.1	CDS	75541708	75541866	75541708	ID=cds.MS.gene00644.t1;Parent=MS.gene00644.t1
chr2.1	exon	75541950	75542007	75541950	ID=MS.gene00644.t1.exon4;Parent=MS.gene00644.t1
chr2.1	CDS	75541950	75542007	75541950	ID=cds.MS.gene00644.t1;Parent=MS.gene00644.t1
chr2.1	exon	75542107	75542424	75542107	ID=MS.gene00644.t1.exon5;Parent=MS.gene00644.t1
chr2.1	CDS	75542107	75542424	75542107	ID=cds.MS.gene00644.t1;Parent=MS.gene00644.t1
chr2.1	exon	75542540	75542779	75542540	ID=MS.gene00644.t1.exon6;Parent=MS.gene00644.t1
chr2.1	CDS	75542540	75542779	75542540	ID=cds.MS.gene00644.t1;Parent=MS.gene00644.t1
chr2.1	exon	75543037	75543354	75543037	ID=MS.gene00644.t1.exon7;Parent=MS.gene00644.t1
chr2.1	CDS	75543037	75543354	75543037	ID=cds.MS.gene00644.t1;Parent=MS.gene00644.t1
chr2.1	exon	75543445	75543630	75543445	ID=MS.gene00644.t1.exon8;Parent=MS.gene00644.t1
chr2.1	CDS	75543445	75543630	75543445	ID=cds.MS.gene00644.t1;Parent=MS.gene00644.t1
chr2.1	exon	75543961	75544036	75543961	ID=MS.gene00644.t1.exon9;Parent=MS.gene00644.t1
chr2.1	CDS	75543961	75544036	75543961	ID=cds.MS.gene00644.t1;Parent=MS.gene00644.t1
chr2.1	exon	75544117	75544686	75544117	ID=MS.gene00644.t1.exon10;Parent=MS.gene00644.t1
chr2.1	CDS	75544117	75544686	75544117	ID=cds.MS.gene00644.t1;Parent=MS.gene00644.t1
chr2.1	exon	75544983	75545110	75544983	ID=MS.gene00644.t1.exon11;Parent=MS.gene00644.t1
chr2.1	CDS	75544983	75545110	75544983	ID=cds.MS.gene00644.t1;Parent=MS.gene00644.t1

Gene Sequence

>MS.gene00644

ATGGAGAGCAATTTCAGTTCATATAATCCTCATGACTTAGACTCTAGCATGAAGAGAAAGCACCATGATGTTAAAGAAGATTATTATACATCATCTTCATCTTTCAATCTAAGGAATGTTTCAAAGCTCATTCTTCCACCACTTGGTGTTTCAAAACAGAATTCAGTTTGCTCAAAAGGCTGGATCATATCACCAATGGATTCTAGATACAGGTAGAGCTTGAGACCAACTTAATCTTTCCAACTCCTTTGTCTCTTAATATTATACTTAAGCTTTATTAATTTTATATTGATTCCTTTTAGGTAAATACTTAACTTAATTAGTGTATGTTTGAATTTACGGTGAATTTGACTCGATCTCAACGATAATTTAACAAAAAATTAGGTTTCAAAGTTATTTTTTTATTTAACTACTAGCATTAATTTTAGGGTCATGTTAACTTGTACACTTAAGGCATAAGTTAAGAAACTAAAAATGGAATTAAAAGATAACTTTTGCATTGAAAATATAAAATTTTAAACTTTTAATACAATGAATGTACAATTTCCAAGAAAAAAAATTTTATGTTTAGTTTTTAAACTTGTGCCCCAAAGGCACAAGTTAACATATTTTATTACTATTACTTTTTATATCCCTCATAGTATATAAAGTTAACTCACTAATGTTGCTAGTAGTCAATTGAGTAAAAAAAATAATCAATTATGTGAATGCATTTAATATTTTATTCTAGTTTTGTTTAATATTGTAAAAACTATTTAGCTTCAAAAAAACTCTAATGTTACTGTTATAATTTTTAAATAGTCATTTCAACGTTGTTTTTGGTCTCTAAATTTGTTACACCGGTCATGGCAAAAAGTACACTTTTAAATTTCAACAAAAAATTAACGTGTTATTGTGATTTCGTTAAATTCAACATGATTTGCAGCAAATAAATTCATTGAGAGTAAATTAAAGCAATCTTTTTGTGCAGGTGTTGGGAGAGTTTTATGGTTATTTTGGTAGCTTATTCTGCATGGGTTTATCCCTTTGAAGTTGCTTTCATGCACTCTTCTCCAAATAGGAAACTATATATTGTGGACAATATTGTTGATCTTTTCTTCGCTGTTGATATTGTTTTGACATTCTTCGTCGCATACGTAGATGGAACAACTCATCTACTTGTCAGAGATTCCAAAAAAATTGCTGTCAGGTAATTTCTAAACCACATATTCCATTCAAACCTTATACTAATTAATTTTTTACTTTTGTCTTTTTTTTTTTTTTTGGTCTAGTTTTCTACTTTTGTCTTTATAATGAGAAAATAAGAAAGAAATCAATTTATTTAGCAGTCTAGAAATATTTATGTAAACGTCTAAATTAATGGATACTTTCTTAATTCTGAATTAATTATTGTATAGTGGAGGCAAATTAGAAGACTTTTAAAAAATGATGAGAACGATATAATATTTTTTGTAAACTAAAAACAAACAATTTAATATTTTCCTTCAAAAAACAATTTAATATTTTACTATTTTTTTTGTAGAATGTTTTATTATTCTAAGCCACTTATTTATTTTGTTTAGCAATCTAGAAATATTTATGTAACACCTAAAATAATGGGTACTTTGCAAACTATTGTATAGTATACGCCAATTAGAAAAAGTGATGAGAACAATTTAATATTTTATTATTTAAAAAAACTGAATCTAAGTAGCTTGTAAAGTGTGAAAGTGGTAATATTGAAATGAAAAAGGATCAAAAGCTCCATTCCCGAATATAATAATATCTCACATTCTCTTATCAGAAAGAACTTGATTTGTTATTATCATTTTTTTCTCTAACTCATGCGTGAGGGATTGATTATACTTATTCATTTTTCCAAATTCCAAATTCTTATTCTTGGATAGGCTAAACATTAGGGCCTAATTTGAACCTAAGTTTGATAACTTTGATATGTGTTAGACCAACTATTCAGGTGTTGATTTTGAATAATCTAATCCAACCTGAAAAATGTCTTAAATTTTTGCCTTAATAATGATTAACGATAGTAGTTGTAGGAGTATTAAATTTTAGCCTAATTATAATTATAAATAGATAAGATAATGAACACCTGGTCTATGTTTAACCACGAGACTAGATATGGGCCAGGATCAAAATTTCTGAACACAAATCAGGCGTTTCTCTTTAGACCCTCCAATATTTTTTAGGCCCCCTAAATATATATATCTGATGGTTATCTACTAGATGTATGTTTATTTTGTCAAATATACATTCAATAGATAACTATGATGTGTATTTATGGAACCTTAAATATATTGGAGGGTCTAAAGACAAATATTGAAACAAATCAGTGGGTACTAGAAAGTAAAATCGGGCCAGCCCATTTCAATGATAGGGTCCAGCAATTTAAAGCAATCAGGATTTGAAATTGTGTCCACCAGTTTTGGAAGTTATACCCCACACCCCTACATTTATACCTTCACCCCAACATTTGATACAATCTACCAAATTTACCCTTTGTATAAAACAAAACACAATCACCCATTCACTTTTCATCCCCACCCTTTTGTAGAGAAAACACAATTAACCCTTTTTCTGGAAAAAACACTTCTTCTGCTTATGCTTTCAACAAACATCACGCCTTTTTCCTGTGTTCTCTCCACCAGTTAAGATTAATTTTAATCAAGATATGCATGAGTTAAGAATAAAATAATTGTTTTTATAAGCTAGGGGAAATATGTGTACAAGTTGTTCAACGAAATTTGAATTGTGAGTGAGGATTTGTTGCACATGAAGTATTGAAAAAAGACAAGCTATGATTTTATCGATTACGGAAGTTGGATTTTTTTAATTGAAATTATTGAGAAAAAATAATACACTGGAACAAGCACATCACGTTTCCGGTTTGTTAATTTTAGAATTATAATTATTATTCTTTTTCTGGACACCCACATGGACCGGAAAGGATTTGTTGAGATTTTCGGTGAATATTCCGTAAAGATAAGAGTATTCGGAAACGTGAATATGAGTGTTCCGAATTATTTTCGGAAATGTTATATAGTGAGAAAAAAAATCAGAAATATATACTTTGAAGAATATTATGTAGGGGTGAACTCATATTGATTTGGTAAGTGTTGAAAGTGAGGGTGAAAAATAATGTATAAAAAGTTAAATAGAAAAAGGGTAAAATTGGAATATTTGAAAATTTGTATGGGTGAAAGTACATATGTCGGGGTATAGGGTAAAATTTCCACCAGTTTTGCTTACTCTTCTAATTTATCGGAACGTAATTTATGATGGCACAAATCGTATTGAAAGATACAATTCGATCAAATAAAAAAATTTCATAAAAAAAATCTTTTGATTCACTAGTTAAGAAGTCAAAAATAGAAATAAATTATAAATTTGATATAGAAATAGTTAATTTTTAAAAGGTATTGAATACATTATTCTCAAAAAAAACTTTCTCTTTTGATTTACTTATCAAGTGCCCTTAGAGCACTTGTTAGTATTTCCCTTTAAAGAATAGGCAATCCAAAAGATTCATAGAGCAACTAACATGAGGATGATCCATAAATGTCATAGCTTCCATCCAAAAATAGTTGTTGCACCCATGTGAGAAATGAAAATGATAGACTTAAATTAAAGAATTATACAAATAAAGAAAATTAAGAATGATTTTGTATATTTTAGGGAAAGAATGGTTTTGCATAACATAGAAGAAGCCTTACATGGTCACAAATATTTGGACACATCATTTGAATGCACACCAAAAATACATATTATTTAATTATTTTAAAAATATACATTATTTAATATTTTTCTCTATACTTTTGTCATTGTTGTGAATGTGCCCAATAAAATGTTCAAATACTTGTGAGCAACCAAGTATTTTCCAATAACACCAATGTCAAGTCAAGTCATTGAGTGACATCATTCTTACTTTCATTCATCGTGTACAATTTGGATAAATGGTTAAAACTTCGAGTTGTGAAAGATCCCGACACTTTAACTGTGCGTTGAAAACAAACATATAATATAATAAGGATTAAATCACGTTGTTAACAAATTCTTGACAAGACATTTTTACTAAAATGATGATGATGTTGTTAGTAATGTTGAGACAGGTACTTGTCAACATGGTTCCTAATGGATGTGGCATCAACTATACCATATGAAGCAATAGGCTACTTTTTAACTGGCAAGCACAAATTGAGTCTACCTTACTACCTCTTAGGAATGCTCAGATTTTGGAGAATTAGACGTGTCAAGCAATTCTTCACAAGGTTCTTAATCATAATCTTTTTCTAATTAATGATTTACTTTACCATATGAATGTGTGTGAAAATTGATTTAATTTCCTTGGCAGGCTTGAGAAAGACATCAGGTTCAGCTATTTCTGGGTCAGATGTGCCAGACTTCTTTCTGTATGTCACATTTCATTTCATTTCATTCTAAATGCTTAGCTTTGACTAGGGAGAATATTGAAACAATTATAAGTGATTATGTTGAAAATTATGGTGCAGGTAACACTATTTTCAGTTCATTGTGCTGGGTGCCTCTATTACATGCTAGCTGATATGTACCCTCATGAAGGAAAGACATGGATTGGAGCTGTGATTCCAAACTTCAGAGAGACAAGCCCTCGGATTAGATATATTTCGGCTATTTATTGGTCCATCACTACCATGACAACTGTTGGTTATGGTGATCTTCATGCTGTCAACACCATGGAAATGATTTTCATTATTTTCTACATGCTCTTCAACCTTGGCCTAACTGCTTACTTGATTGGTAACATGACAAATCTTGTTGTTGAAGGAACTCGTCGCACCATGGAATTTGTAAGAATTACTACTTTACCACTACTTCACATTATCATTTATGATTTTCATTTTGTTTCCTGTCACAAGAAATTCATGACAAAATTGTGTACTAATGCATAAAATTTTGGTGCAGAGAAACAGCATTGAAGCAGCATCAAATTTTGTGTGCCGAAATCGGTTGCCTCCAAGGTTAAAAGAGCAGATCCTGGCTTACATGTGTTTGAGATTTAAGGCAGAGAGCTTGAATCAGCATCAGCTAATTGAACAGCTACCAAAGTCAATTTGCAAAGGCATTTGCCAGCATTTGTTTTTTCCAACTGTAGAGAAAGTCTATCTCTTCAAAGGCGTCTCAAAAGAAATCCTTTTGTCCCTAGTAAGAGATTAAATTTTGATTTTTACACTTCTATATGGACCAATAACGCTTGCGTATAAGCTATTTCTATTACAAAAGATAAAATAAAGTCAAACTGTTTTTCGTATAAGCTGAGATTATTTCATAAGCAATCTATAGACATGTCATAAGTTATTTTGTTTCCATATTCTGTCGTAAATAGACGTATGTATTTATGCCAATGGATATGATCAAATAAGCCAATTCAAACGTTCACTAAATTGTGAATGTGGTTGTAGGTTGCAAAAATGAAGGCAGAGTACATACCACCTAAAGAGGATGTAATCATGCAAAATGAATCACCAGATGATGTTTATATTTTAGTGTCAGGAGAAGTGGAGATTATTGATAGTGTTATAGAGAAAGAGAGAATTTTAGGCACTCTAACAACTGGAGACATGTTTGGAGAAGTTGGTGCACTTTGTTGTAGGCCTCAGAGTTTTACATACAGAACCAAGACTCTAACACAGCTTCTGAAGCTGAAAACCAGTGATCTTATAGAAGCAATGCAGATTAAAAAAGAAGACAATATACTAATACTCAAAAATTTCCTTCAGGTTGGTTACTGTCTTGACTTGTGTGTAATTATTTATTATGATTTCCATTCTAAAGCTTATACATCATATCATAATGTGATACAATTGCAGCATTTCAAGCAGCTTAAGGATTTGAGTATCAAAGATTTAATGGTGGAAAATGTGGAGGAAGACGATCCTAACATGGCTGTGAATTTGTTAACTGTGGCCAGCACGGGCAATGCTGCTTTTCTCGAGGAGCTTCTAAGAGCTGGTTTGGATCCTGACATTGGAGACTCAAAAGAAAAAACTCCATTGGTATGCTCATGTCTAATAAAACATCTAACCTTTTAAAGATGTTCCTTCATGTATATCACTGCTGACATATCAGATCGACGGTGTGTTCGGTGTCCTACACATGTGACGGTGTGTGAGTGTCCAACACCGACTTGACATTGATATATGTGGTTGCATTCAATTACTTTCATTCTCTTAAATTATTAGGAATGTCTACGCTTAGTCTTGTGTCCGGTGTTTGTGTCGGTGGCAGTGCTTCTTAGATTATTGCCTTTAATATAGTTTTGACTTTTGATCATAGCTAGCAACTATTTGTCAAAACTATAAACTTAACTGTTGGTCTTTTTGCAGCACATAGCTGCATCAAATGGGCATGAAGAGTGTGTTAAAGTCTTGCTTAAGCATACATGCAACATACATATAAAAGGTAACCTTTAACTTAAGACATATATTTTTCTATGATTTCGTTTTTAGGTGGTTTATATTTAACTTAACAATAATTGGCAGATATGAATGGTGACACTGCACTATGGTATGCTATAGCATCAAAACATCACTCAATATTCAGGATCCTCTATCAGCTATCTGCTCTTTCTGATCCATACACAGCAGGCAATCTCCTATGTACAGCAGCAAAAAGAAATGATATAACAGTGATGCATGAACTTTTAAAGCAAGGATTAAACATTGACTCAAAAGATCGACATGGCATGACAGCTATCCAAATTGCTATGGCAGAAAATCATGTGGACATGGTTCAGTTGCTTGTCATGAACGGCGCAGATGTTACTGATGTACATGTTCATGAATTTTCTGCATCCATCTTAAATGAAATTCTGCAGAAACGCGAAATCGGACATCTAATTAATGTGAGTGAGGCCATGCCTAGTGAGTATGTATTAAAGGTGCAAAGTCAAGAAGAACAGAAGCAGATTTGGGGAAGATATAATGGACTAGATTGTCCAAGAGTAAGCATATATAGAGGTCACCCAGTAGTGAGAAGAGAAAGAGGTTTCATTGAAGCTGGAAAGTTAATAAGGTTGCCTGATTCATTAGAGAAGCTCAAAATTATTGCAGGTAAAATTTCAAATTATTCATAAGTTAGTAATGATATTGTTATTATAATAATGTAATTACTAGCGTGTAGATGGACACAAATGTCTTATGTCTACTTTTCTCGGTCTCTCATTTTTTTTTATGAGAAATGATATTTGAACAACCAATTTGAGTGATGAAATCTAGTTGTTGTTAAATGGTTGTCTATACAATTCATGAAGAAAAAAAAATATCTATATGATATTGTGTACATTGTTTAAGAGAAAAAAAATGCAAGTCTTAGTATCCTGATTTATGATTTTATTTGTGTACAATAGGTGAAAAATTTGGGTTTGATGCAAAAGATACAATGGTGACAAATGAAGAAGGAGCAGAAATAGATTGTATTGATGTGATCAGAGATAATGACAAACTTTTTTTTGTTGAAGAGGCTATTGATGCATAA

Protein sequence

>MS.gene00644.t1

MESNFSSYNPHDLDSSMKRKHHDVKEDYYTSSSSFNLRNVSKLILPPLGVSKQNSVCSKGWIISPMDSRYRCWESFMVILVAYSAWVYPFEVAFMHSSPNRKLYIVDNIVDLFFAVDIVLTFFVAYVDGTTHLLVRDSKKIAVRYLSTWFLMDVASTIPYEAIGYFLTGKHKLSLPYYLLGMLRFWRIRRVKQFFTRLEKDIRFSYFWVRCARLLSVTLFSVHCAGCLYYMLADMYPHEGKTWIGAVIPNFRETSPRIRYISAIYWSITTMTTVGYGDLHAVNTMEMIFIIFYMLFNLGLTAYLIGNMTNLVVEGTRRTMEFRNSIEAASNFVCRNRLPPRLKEQILAYMCLRFKAESLNQHQLIEQLPKSICKGICQHLFFPTVEKVYLFKGVSKEILLSLVAKMKAEYIPPKEDVIMQNESPDDVYILVSGEVEIIDSVIEKERILGTLTTGDMFGEVGALCCRPQSFTYRTKTLTQLLKLKTSDLIEAMQIKKEDNILILKNFLQHFKQLKDLSIKDLMVENVEEDDPNMAVNLLTVASTGNAAFLEELLRAGLDPDIGDSKEKTPLHIAASNGHEECVKVLLKHTCNIHIKDMNGDTALWYAIASKHHSIFRILYQLSALSDPYTAGNLLCTAAKRNDITVMHELLKQGLNIDSKDRHGMTAIQIAMAENHVDMVQLLVMNGADVTDVHVHEFSASILNEILQKREIGHLINVSEAMPSEYVLKVQSQEEQKQIWGRYNGLDCPRVSIYRGHPVVRRERGFIEAGKLIRLPDSLEKLKIIAGEKFGFDAKDTMVTNEEGAEIDCIDVIRDNDKLFFVEEAIDA