Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68879.t1 | XP_003610495.1 | 98 | 542 | 11 | 0 | 1 | 542 | 1 | 542 | 0.00E+00 | 1079.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68879.t1 | Q94CF0 | 75.1 | 538 | 127 | 2 | 10 | 542 | 10 | 545 | 2.8e-243 | 842.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68879.t1 | G7JKG5 | 98.0 | 542 | 11 | 0 | 1 | 542 | 1 | 542 | 0.0e+00 | 1079.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene93693 | MS.gene68879 | PPI |
| MS.gene63806 | MS.gene68879 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68879.t1 | MTR_4g132840 | 97.970 | 542 | 11 | 0 | 1 | 542 | 1 | 542 | 0.0 | 1103 |
| MS.gene68879.t1 | MTR_2g025180 | 80.899 | 534 | 99 | 1 | 12 | 542 | 7 | 540 | 0.0 | 914 |
| MS.gene68879.t1 | MTR_5g093720 | 76.022 | 538 | 124 | 2 | 8 | 542 | 8 | 543 | 0.0 | 848 |
| MS.gene68879.t1 | MTR_3g054130 | 72.897 | 535 | 137 | 3 | 10 | 541 | 13 | 542 | 0.0 | 802 |
| MS.gene68879.t1 | MTR_3g054210 | 80.519 | 385 | 73 | 1 | 155 | 539 | 54 | 436 | 0.0 | 662 |
| MS.gene68879.t1 | MTR_5g093720 | 75.452 | 387 | 90 | 2 | 8 | 391 | 8 | 392 | 0.0 | 597 |
| MS.gene68879.t1 | MTR_3g115640 | 42.857 | 84 | 48 | 0 | 15 | 98 | 6 | 89 | 3.63e-14 | 76.3 |
| MS.gene68879.t1 | MTR_5g099170 | 39.326 | 89 | 54 | 0 | 10 | 98 | 5 | 93 | 5.10e-13 | 72.4 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68879.t1 | AT4G05520 | 74.349 | 538 | 134 | 2 | 8 | 542 | 9 | 545 | 0.0 | 850 |
| MS.gene68879.t1 | AT4G05520 | 74.115 | 537 | 136 | 2 | 8 | 542 | 9 | 544 | 0.0 | 848 |
| MS.gene68879.t1 | AT3G20290 | 73.849 | 543 | 125 | 2 | 10 | 542 | 10 | 545 | 0.0 | 841 |
| MS.gene68879.t1 | AT3G20290 | 73.849 | 543 | 125 | 2 | 10 | 542 | 10 | 545 | 0.0 | 841 |
| MS.gene68879.t1 | AT3G20290 | 73.849 | 543 | 125 | 2 | 10 | 542 | 10 | 545 | 0.0 | 841 |
| MS.gene68879.t1 | AT1G21630 | 45.000 | 80 | 44 | 0 | 19 | 98 | 13 | 92 | 1.63e-14 | 77.4 |
| MS.gene68879.t1 | AT1G21630 | 45.000 | 80 | 44 | 0 | 19 | 98 | 13 | 92 | 1.64e-14 | 77.4 |
| MS.gene68879.t1 | AT1G21630 | 45.000 | 80 | 44 | 0 | 19 | 98 | 13 | 92 | 1.67e-14 | 77.4 |
| MS.gene68879.t1 | AT1G21630 | 45.000 | 80 | 44 | 0 | 19 | 98 | 13 | 92 | 1.67e-14 | 77.4 |
| MS.gene68879.t1 | AT1G20760 | 30.573 | 157 | 97 | 4 | 13 | 157 | 5 | 161 | 3.30e-14 | 76.3 |
Find 106 sgRNAs with CRISPR-Local
Find 255 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CTGCAGCTCATGAGAGTTTA+TGG | 0.160965 | 8.2:+1421311 | MS.gene68879:intron |
| CCAACAAAGCCTTCATTTAT+AGG | 0.188899 | 8.2:-1421747 | None:intergenic |
| CGACCGTCACACGCCTTTCT+TGG | 0.227930 | 8.2:-1421834 | None:intergenic |
| TGGTTCATCTTAGCCGATTC+AGG | 0.263979 | 8.2:+1417977 | MS.gene68879:CDS |
| AATGCCCAACCTGATGTATT+TGG | 0.273045 | 8.2:+1419507 | MS.gene68879:CDS |
| ATATATACACGTACAACTTC+TGG | 0.293769 | 8.2:-1421371 | None:intergenic |
| TCTTGAAGATGAATTTAAAA+AGG | 0.293969 | 8.2:+1422130 | MS.gene68879:CDS |
| GAAGTTGTACGTGTATATAT+TGG | 0.299728 | 8.2:+1421374 | MS.gene68879:CDS |
| CAAACATCACTTACCAATAA+TGG | 0.301165 | 8.2:-1420164 | None:intergenic |
| TGGAGCACTGATGTGGTCTT+TGG | 0.305099 | 8.2:+1421331 | MS.gene68879:CDS |
| TTTAGTGGCCTGACAACTTT+TGG | 0.307719 | 8.2:+1420809 | MS.gene68879:CDS |
| ACTGATGAGAGGAGCATTCC+TGG | 0.309209 | 8.2:+1420755 | MS.gene68879:CDS |
| TTACTTGTTGAGTATCAATT+TGG | 0.313457 | 8.2:-1421195 | None:intergenic |
| TCTCTGAAGTGATCAATATT+AGG | 0.314915 | 8.2:-1422268 | None:intergenic |
| ATTTAGAAATCCTTATGATT+AGG | 0.327594 | 8.2:+1422396 | MS.gene68879:CDS |
| AAATGATCTCCTTTCAGATT+TGG | 0.327851 | 8.2:+1421803 | MS.gene68879:CDS |
| GAAGGCTTTGTTGGCCCATT+AGG | 0.330059 | 8.2:+1421756 | MS.gene68879:CDS |
| CCTATAAATGAAGGCTTTGT+TGG | 0.345953 | 8.2:+1421747 | MS.gene68879:CDS |
| TTAGCTTTGCCCATCATTGC+AGG | 0.348004 | 8.2:-1422083 | None:intergenic |
| CTAAATTTCTTTAAGAGCTC+TGG | 0.348355 | 8.2:-1422379 | None:intergenic |
| AAACCAATGGTCATGCTTCT+TGG | 0.353013 | 8.2:+1420336 | MS.gene68879:CDS |
| CTTGACACAGGGGCACATAT+TGG | 0.369302 | 8.2:+1420528 | MS.gene68879:intron |
| TGTTTGTTTAATTAGAATAC+AGG | 0.374061 | 8.2:+1419471 | MS.gene68879:intron |
| AATACGCGTTGTGTTGAATA+AGG | 0.381834 | 8.2:+1421168 | MS.gene68879:CDS |
| AAAGTTGTCAGGCCACTAAA+AGG | 0.381997 | 8.2:-1420806 | None:intergenic |
| GACACCCCTGGTGTCCTCTC+TGG | 0.384423 | 8.2:+1420986 | MS.gene68879:CDS |
| CTCATTTCTGTGGGACAGGC+GGG | 0.402719 | 8.2:+1418497 | MS.gene68879:CDS |
| CGGCTAAGATGAACCATTGC+TGG | 0.403204 | 8.2:-1417970 | None:intergenic |
| TTGTATAAACCTGCTTGAGC+TGG | 0.410116 | 8.2:-1418165 | None:intergenic |
| GCAGTGACATCAATAATAGA+TGG | 0.412207 | 8.2:+1420071 | MS.gene68879:CDS |
| TTTGAAGCAACTGGTGGAAA+AGG | 0.416156 | 8.2:-1419634 | None:intergenic |
| CGAGTTTGTGAGGATCAAAT+AGG | 0.427269 | 8.2:-1421090 | None:intergenic |
| GGAGCACTGATGTGGTCTTT+GGG | 0.444899 | 8.2:+1421332 | MS.gene68879:CDS |
| TATAATTAGTCATCTTAAGA+TGG | 0.447879 | 8.2:+1422055 | MS.gene68879:CDS |
| CTTTGTTGGCCCATTAGGAC+AGG | 0.454491 | 8.2:+1421761 | MS.gene68879:CDS |
| AAGTTGTACGTGTATATATT+GGG | 0.465764 | 8.2:+1421375 | MS.gene68879:CDS |
| AAGAAAGGCGTGTGACGGTC+GGG | 0.466010 | 8.2:+1421836 | MS.gene68879:CDS |
| TTTGGTAGATATTCCAAGAA+AGG | 0.467486 | 8.2:+1421821 | MS.gene68879:CDS |
| TCGACAGCTACAGTATTTCC+AGG | 0.474626 | 8.2:-1420773 | None:intergenic |
| TGTATAAACCTGCTTGAGCT+GGG | 0.475887 | 8.2:-1418164 | None:intergenic |
| AATCTGTCAGTCGTGGGCTC+TGG | 0.480066 | 8.2:-1420552 | None:intergenic |
| GATGGAGATGCCTGCAATGA+TGG | 0.484172 | 8.2:+1422073 | MS.gene68879:CDS |
| AGATGAAAACAGTTTCGGAT+TGG | 0.485016 | 8.2:+1417912 | None:intergenic |
| GCTAGATGAAATAACATTTG+TGG | 0.485142 | 8.2:+1420964 | MS.gene68879:CDS |
| GCGTCGATTCCTTCCATGAC+TGG | 0.495974 | 8.2:-1419348 | None:intergenic |
| TGTGCTCATTCGAAGAAGAA+TGG | 0.500241 | 8.2:-1417937 | None:intergenic |
| CACGTCTTACCAAATACATC+AGG | 0.506192 | 8.2:-1419516 | None:intergenic |
| TGCTTCAAAATCTGTAAAGA+AGG | 0.508344 | 8.2:+1419648 | MS.gene68879:CDS |
| AGAGTTTGTTACTGCAATGC+AGG | 0.509107 | 8.2:+1418370 | MS.gene68879:CDS |
| TGTGGAGCGGTTAAAACCAT+TGG | 0.509696 | 8.2:+1420109 | MS.gene68879:CDS |
| AACGATAGGCCTATAAATGA+AGG | 0.512787 | 8.2:+1421738 | MS.gene68879:CDS |
| ATCTTGCAAAACAGGTTCAA+AGG | 0.513723 | 8.2:+1422218 | MS.gene68879:intron |
| TTGCTAAGATGTGAATATCC+AGG | 0.514496 | 8.2:+1420396 | MS.gene68879:CDS |
| TCTTGCAAAACAGGTTCAAA+GGG | 0.520886 | 8.2:+1422219 | MS.gene68879:intron |
| ACAGCTCATTTCTGTGGGAC+AGG | 0.521260 | 8.2:+1418493 | MS.gene68879:intron |
| CAACGAAGTTATGATTTCAC+TGG | 0.522621 | 8.2:+1421025 | MS.gene68879:CDS |
| ATCATAGGTTTGGGCTATTG+CGG | 0.524238 | 8.2:+1418316 | MS.gene68879:intron |
| TAGCATCATTTCCACTGATA+CGG | 0.530170 | 8.2:-1418108 | None:intergenic |
| CAAGAAAGGCGTGTGACGGT+CGG | 0.530982 | 8.2:+1421835 | MS.gene68879:CDS |
| ACGAACTACCAAAAGTTGTC+AGG | 0.533920 | 8.2:-1420817 | None:intergenic |
| CTTACCAAATACATCAGGTT+GGG | 0.534815 | 8.2:-1419511 | None:intergenic |
| AATCGATAAGTGACCTCCAA+TGG | 0.536634 | 8.2:-1420125 | None:intergenic |
| AACATACAGCTCATTTCTGT+GGG | 0.538922 | 8.2:+1418488 | MS.gene68879:intron |
| TAACATACAGCTCATTTCTG+TGG | 0.543650 | 8.2:+1418487 | MS.gene68879:intron |
| AGGGAGTTTCATCTGCCAGC+TGG | 0.548527 | 8.2:+1422238 | MS.gene68879:CDS |
| TGACCAAGAAGCATGACCAT+TGG | 0.549477 | 8.2:-1420339 | None:intergenic |
| CTTCTTGGTCAATATTCCAC+AGG | 0.551134 | 8.2:+1420351 | MS.gene68879:CDS |
| AAAGATCAAACTTCCAGTCA+TGG | 0.553680 | 8.2:+1419335 | MS.gene68879:CDS |
| CAAGCTGTAGATGACATGCT+TGG | 0.556132 | 8.2:+1422346 | MS.gene68879:CDS |
| TGACAGATTTGTTGCTGTCA+TGG | 0.556604 | 8.2:+1420566 | MS.gene68879:CDS |
| TGCAATGATGGGCAAAGCTA+AGG | 0.558316 | 8.2:+1422085 | MS.gene68879:CDS |
| GATGGAGATGGCCGTATCAG+TGG | 0.562870 | 8.2:+1418097 | MS.gene68879:intron |
| AGCAACAAATCTGTCAGTCG+TGG | 0.568117 | 8.2:-1420559 | None:intergenic |
| GCTCATTTCTGTGGGACAGG+CGG | 0.569244 | 8.2:+1418496 | MS.gene68879:intron |
| ATTTCACTGGTGTTATATCG+TGG | 0.572590 | 8.2:+1421038 | MS.gene68879:CDS |
| ATGGAGATGCCTGCAATGAT+GGG | 0.573266 | 8.2:+1422074 | MS.gene68879:CDS |
| ATCAAACTTCCAGTCATGGA+AGG | 0.574841 | 8.2:+1419339 | MS.gene68879:CDS |
| GGAGCGGTTAAAACCATTGG+AGG | 0.579905 | 8.2:+1420112 | MS.gene68879:CDS |
| CAGTGACATCAATAATAGAT+GGG | 0.583352 | 8.2:+1420072 | MS.gene68879:CDS |
| GTTTGTTTAATTAGAATACA+GGG | 0.584681 | 8.2:+1419472 | MS.gene68879:intron |
| GCAACTGGTGGAAAAGGCCG+AGG | 0.585876 | 8.2:-1419628 | None:intergenic |
| TATAAACCTGCTTGAGCTGG+GGG | 0.587511 | 8.2:-1418162 | None:intergenic |
| ACTTAGGTACTGGTCAGCCT+CGG | 0.589702 | 8.2:+1419611 | MS.gene68879:intron |
| ATTCCAAGAAAGGCGTGTGA+CGG | 0.590078 | 8.2:+1421831 | MS.gene68879:CDS |
| GTATAAACCTGCTTGAGCTG+GGG | 0.592484 | 8.2:-1418163 | None:intergenic |
| TCTTACCAAATACATCAGGT+TGG | 0.596965 | 8.2:-1419512 | None:intergenic |
| ATATTAGGAAAATCACCAGC+TGG | 0.597150 | 8.2:-1422253 | None:intergenic |
| ACATTGAAACGTACCAGCAA+TGG | 0.600140 | 8.2:+1417957 | MS.gene68879:CDS |
| ATAACATTTGTGGACACCCC+TGG | 0.602613 | 8.2:+1420974 | MS.gene68879:CDS |
| TCATTTCTGTGGGACAGGCG+GGG | 0.609400 | 8.2:+1418498 | MS.gene68879:CDS |
| TCACTGATGTCGAGTTTGTG+AGG | 0.613213 | 8.2:-1421100 | None:intergenic |
| TGGGTTGAAGAAATTGTATG+TGG | 0.618187 | 8.2:+1420091 | MS.gene68879:CDS |
| GAATATCTACCAAATCTGAA+AGG | 0.620381 | 8.2:-1421812 | None:intergenic |
| TTTAGCATCAAAATCACTGT+CGG | 0.628300 | 8.2:-1420316 | None:intergenic |
| GCAACAAATCTGTCAGTCGT+GGG | 0.631768 | 8.2:-1420558 | None:intergenic |
| TGAAGAAATTGTATGTGGAG+CGG | 0.633851 | 8.2:+1420096 | MS.gene68879:CDS |
| GCAAAGCTAAGGTGCAACAA+AGG | 0.634595 | 8.2:+1422096 | MS.gene68879:CDS |
| TTCTCCAGAGAGGACACCAG+GGG | 0.637406 | 8.2:-1420990 | None:intergenic |
| TGTAGTCTGGAACTGATGAG+AGG | 0.669559 | 8.2:+1420744 | MS.gene68879:intron |
| TGATTGATGGTAGATGGAGA+TGG | 0.672828 | 8.2:+1418085 | MS.gene68879:intron |
| TTTCTCCAGAGAGGACACCA+GGG | 0.678570 | 8.2:-1420991 | None:intergenic |
| ATTGATGTCACTGCACTGAG+AGG | 0.682164 | 8.2:-1420062 | None:intergenic |
| ATTGCGGATACTAAGAGACA+AGG | 0.684993 | 8.2:+1418332 | MS.gene68879:CDS |
| TAATATTGATCACTTCAGAG+AGG | 0.691370 | 8.2:+1422270 | MS.gene68879:CDS |
| GAGTTTATGGAGCACTGATG+TGG | 0.700795 | 8.2:+1421324 | MS.gene68879:CDS |
| CGAGTGATTTACTCTCTACG+CGG | 0.771106 | 8.2:+1421133 | MS.gene68879:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATTTAATTGATATTACTT+AGG | + | chr8.2:1419595-1419614 | MS.gene68879:intron | 10.0% |
| !! | ATGAAAATACAAACAAATAA+AGG | - | chr8.2:1421949-1421968 | None:intergenic | 15.0% |
| !! | TCTTAAATAATTGTTGAAAT+GGG | + | chr8.2:1419095-1419114 | MS.gene68879:intron | 15.0% |
| !!! | TTATTTCTTTATTAATGACA+TGG | + | chr8.2:1419546-1419565 | MS.gene68879:intron | 15.0% |
| !! | AAAATTGAAGTTAAACTGAA+GGG | - | chr8.2:1419234-1419253 | None:intergenic | 20.0% |
| !! | AAATTAGAAAAACAAGTTGT+CGG | - | chr8.2:1421261-1421280 | None:intergenic | 20.0% |
| !! | AAGATATAAAAAAAACTCAC+TGG | - | chr8.2:1420878-1420897 | None:intergenic | 20.0% |
| !! | AGGTAATACAAGATTAATAA+AGG | - | chr8.2:1420504-1420523 | None:intergenic | 20.0% |
| !! | CAACTGAAATTAATAGAAAT+GGG | - | chr8.2:1419308-1419327 | None:intergenic | 20.0% |
| !! | GAAAAAGAAAAAGTGATAAT+TGG | - | chr8.2:1418057-1418076 | None:intergenic | 20.0% |
| !! | GTATATAATGTATTATCTGT+TGG | + | chr8.2:1419189-1419208 | MS.gene68879:intron | 20.0% |
| !! | GTCTTAAATAATTGTTGAAA+TGG | + | chr8.2:1419094-1419113 | MS.gene68879:intron | 20.0% |
| !! | GTTATAAAATATGATGTCAT+TGG | + | chr8.2:1421975-1421994 | MS.gene68879:intron | 20.0% |
| !! | GTTTGTTTAATTAGAATACA+GGG | + | chr8.2:1419472-1419491 | MS.gene68879:intron | 20.0% |
| !! | TAGATTTGATTAACATCTAA+AGG | - | chr8.2:1420625-1420644 | None:intergenic | 20.0% |
| !! | TATAATTAGTCATCTTAAGA+TGG | + | chr8.2:1422055-1422074 | MS.gene68879:CDS | 20.0% |
| !! | TCAACTGAAATTAATAGAAA+TGG | - | chr8.2:1419309-1419328 | None:intergenic | 20.0% |
| !! | TCTTGAAGATGAATTTAAAA+AGG | + | chr8.2:1422130-1422149 | MS.gene68879:CDS | 20.0% |
| !! | TGTTTGTTTAATTAGAATAC+AGG | + | chr8.2:1419471-1419490 | MS.gene68879:intron | 20.0% |
| !!! | AAAACTTCATTTTGTCAAAA+TGG | - | chr8.2:1419694-1419713 | None:intergenic | 20.0% |
| !!! | AAACTTCATTTTGTCAAAAT+GGG | - | chr8.2:1419693-1419712 | None:intergenic | 20.0% |
| !!! | ACAACTTGTTTTTCTAATTT+TGG | + | chr8.2:1421261-1421280 | MS.gene68879:intron | 20.0% |
| !!! | ATCTTTTTTTATTTGTAGTC+TGG | + | chr8.2:1420731-1420750 | MS.gene68879:intron | 20.0% |
| !!! | ATGACATCATATTTTATAAC+CGG | - | chr8.2:1421975-1421994 | None:intergenic | 20.0% |
| !!! | ATTACTATGCATAAACATTT+TGG | + | chr8.2:1419929-1419948 | MS.gene68879:intron | 20.0% |
| !!! | CAAACATTCAATTTTAAAGT+CGG | - | chr8.2:1418464-1418483 | None:intergenic | 20.0% |
| !!! | CATTTTTTATTTGCTTTCAT+AGG | - | chr8.2:1419718-1419737 | None:intergenic | 20.0% |
| !!! | TCTTTATGCTTTCATAATTT+TGG | + | chr8.2:1421498-1421517 | MS.gene68879:intron | 20.0% |
| !!! | TTGTTTGTATTTTCATTTTC+CGG | + | chr8.2:1421953-1421972 | MS.gene68879:intron | 20.0% |
| !!! | TTTTATATTATTTTCAGACC+TGG | + | chr8.2:1421869-1421888 | MS.gene68879:intron | 20.0% |
| ! | AAGTTGTACGTGTATATATT+GGG | + | chr8.2:1421375-1421394 | MS.gene68879:CDS | 25.0% |
| ! | AATATGTAACGAAGAAACTA+AGG | - | chr8.2:1422188-1422207 | None:intergenic | 25.0% |
| ! | AATTGATATTACTTAGGTAC+TGG | + | chr8.2:1419601-1419620 | MS.gene68879:intron | 25.0% |
| ! | ACTTAATTGTAACTGAAATG+AGG | - | chr8.2:1418217-1418236 | None:intergenic | 25.0% |
| ! | ATTTATGAACTTTCTCTTGT+TGG | - | chr8.2:1418964-1418983 | None:intergenic | 25.0% |
| ! | CGTTATACATCTATATTTCA+AGG | + | chr8.2:1419005-1419024 | MS.gene68879:intron | 25.0% |
| ! | CTGCTGAATGTAAATAATTT+GGG | + | chr8.2:1418890-1418909 | MS.gene68879:intron | 25.0% |
| ! | GAAAACAAACCAATAAGAAA+AGG | - | chr8.2:1419451-1419470 | None:intergenic | 25.0% |
| ! | GAAAATTGAAGTTAAACTGA+AGG | - | chr8.2:1419235-1419254 | None:intergenic | 25.0% |
| ! | GCAAAATAAGGAAACAAAAA+TGG | - | chr8.2:1422166-1422185 | None:intergenic | 25.0% |
| ! | TAACATCTAAAGGAAATACA+AGG | - | chr8.2:1420615-1420634 | None:intergenic | 25.0% |
| ! | TAGCTATTAGGCTTAATTAA+TGG | + | chr8.2:1418935-1418954 | MS.gene68879:intron | 25.0% |
| ! | TATTTCTTCATCATAGGTTT+GGG | + | chr8.2:1418307-1418326 | MS.gene68879:intron | 25.0% |
| ! | TCTGCTGAATGTAAATAATT+TGG | + | chr8.2:1418889-1418908 | MS.gene68879:intron | 25.0% |
| ! | TGAATGTAAATAATTTGGGA+TGG | + | chr8.2:1418894-1418913 | MS.gene68879:intron | 25.0% |
| !! | ATTTCCTATTTCTTCATCAT+AGG | + | chr8.2:1418301-1418320 | MS.gene68879:intron | 25.0% |
| !! | TAAACAAAACTGTTCCTTTT+GGG | + | chr8.2:1420643-1420662 | MS.gene68879:intron | 25.0% |
| !! | TGAACTTACTTTCTGTTTTA+AGG | - | chr8.2:1418544-1418563 | None:intergenic | 25.0% |
| !! | TGATTTTGTATCTCCATTAT+TGG | + | chr8.2:1420151-1420170 | MS.gene68879:CDS | 25.0% |
| !! | TTACTTGTTGAGTATCAATT+TGG | - | chr8.2:1421198-1421217 | None:intergenic | 25.0% |
| !! | TTGTACTAGATAATTTTTCG+TGG | - | chr8.2:1418697-1418716 | None:intergenic | 25.0% |
| !!! | ATGTATGTTGAGTTTTAACA+TGG | + | chr8.2:1418416-1418435 | MS.gene68879:intron | 25.0% |
| !!! | CTTTCATAATTTTGGTGAAA+AGG | + | chr8.2:1421506-1421525 | MS.gene68879:intron | 25.0% |
| !!! | TTGTTGATTCCTTTTCTTAT+TGG | + | chr8.2:1419439-1419458 | MS.gene68879:intron | 25.0% |
| !!! | TTTTCGTTTTCATTGATTGA+TGG | + | chr8.2:1418072-1418091 | MS.gene68879:intron | 25.0% |
| AAATGATCTCCTTTCAGATT+TGG | + | chr8.2:1421803-1421822 | MS.gene68879:CDS | 30.0% | |
| AAGGAAACAAAAATGGAAGT+AGG | - | chr8.2:1422159-1422178 | None:intergenic | 30.0% | |
| AATATGATGTCATTGGAATG+AGG | + | chr8.2:1421982-1422001 | MS.gene68879:intron | 30.0% | |
| ACAAGTTGTCGGAAATATTT+AGG | - | chr8.2:1421250-1421269 | None:intergenic | 30.0% | |
| AGTCCATTAGAAATACAAAC+TGG | - | chr8.2:1419801-1419820 | None:intergenic | 30.0% | |
| ATATATACACGTACAACTTC+TGG | - | chr8.2:1421374-1421393 | None:intergenic | 30.0% | |
| CAAACATCACTTACCAATAA+TGG | - | chr8.2:1420167-1420186 | None:intergenic | 30.0% | |
| CAAACCTATGATGAAGAAAT+AGG | - | chr8.2:1418308-1418327 | None:intergenic | 30.0% | |
| CAGTGACATCAATAATAGAT+GGG | + | chr8.2:1420072-1420091 | MS.gene68879:CDS | 30.0% | |
| CTGAAGAATGTCAAATTAAC+TGG | - | chr8.2:1421677-1421696 | None:intergenic | 30.0% | |
| GAAGAAACTAAGGCAAAATA+AGG | - | chr8.2:1422178-1422197 | None:intergenic | 30.0% | |
| GAAGTAGAAAAAACCTGAAT+CGG | - | chr8.2:1417993-1418012 | None:intergenic | 30.0% | |
| GAAGTTGTACGTGTATATAT+TGG | + | chr8.2:1421374-1421393 | MS.gene68879:CDS | 30.0% | |
| GAATATCTACCAAATCTGAA+AGG | - | chr8.2:1421815-1421834 | None:intergenic | 30.0% | |
| GCTAGATGAAATAACATTTG+TGG | + | chr8.2:1420964-1420983 | MS.gene68879:CDS | 30.0% | |
| GTCATTATGACTAACAAGTT+AGG | + | chr8.2:1420268-1420287 | MS.gene68879:intron | 30.0% | |
| TAAAAAAAACTCACTGGATG+TGG | - | chr8.2:1420872-1420891 | None:intergenic | 30.0% | |
| TAATATTGATCACTTCAGAG+AGG | + | chr8.2:1422270-1422289 | MS.gene68879:CDS | 30.0% | |
| TATATACTGCTTTGACATAG+TGG | + | chr8.2:1418648-1418667 | MS.gene68879:intron | 30.0% | |
| TGCTTCAAAATCTGTAAAGA+AGG | + | chr8.2:1419648-1419667 | MS.gene68879:CDS | 30.0% | |
| TTACTATCATCTTGCAAAAC+AGG | + | chr8.2:1422210-1422229 | MS.gene68879:intron | 30.0% | |
| TTATGATGTTCAATTGCAAC+AGG | - | chr8.2:1421476-1421495 | None:intergenic | 30.0% | |
| TTTACATTCAGCAGATAAAG+AGG | - | chr8.2:1418884-1418903 | None:intergenic | 30.0% | |
| TTTAGCATCAAAATCACTGT+CGG | - | chr8.2:1420319-1420338 | None:intergenic | 30.0% | |
| TTTGGTAGATATTCCAAGAA+AGG | + | chr8.2:1421821-1421840 | MS.gene68879:CDS | 30.0% | |
| ! | AAACAAAACTGTTCCTTTTG+GGG | + | chr8.2:1420644-1420663 | MS.gene68879:intron | 30.0% |
| ! | AATTTTTCGTGGAACAATAG+TGG | - | chr8.2:1418686-1418705 | None:intergenic | 30.0% |
| ! | CTAAACAAAACTGTTCCTTT+TGG | + | chr8.2:1420642-1420661 | MS.gene68879:intron | 30.0% |
| ! | CTAAATTTCTTTAAGAGCTC+TGG | - | chr8.2:1422382-1422401 | None:intergenic | 30.0% |
| ! | CTATTTCTTCATCATAGGTT+TGG | + | chr8.2:1418306-1418325 | MS.gene68879:intron | 30.0% |
| ! | GTACCAGTTTGTATTTCTAA+TGG | + | chr8.2:1419795-1419814 | MS.gene68879:intron | 30.0% |
| ! | TAAGACCAGATGATTTTCTT+AGG | - | chr8.2:1419080-1419099 | None:intergenic | 30.0% |
| ! | TCTACAGCTTGAATCATTTT+AGG | - | chr8.2:1422337-1422356 | None:intergenic | 30.0% |
| ! | TTGTTTTCGCATTACGTTAA+TGG | + | chr8.2:1421642-1421661 | MS.gene68879:intron | 30.0% |
| ! | TTTCATTGATTGATGGTAGA+TGG | + | chr8.2:1418079-1418098 | MS.gene68879:intron | 30.0% |
| !! | ATAATTTTGGTGAAAAGGCT+TGG | + | chr8.2:1421511-1421530 | MS.gene68879:intron | 30.0% |
| !! | ATGTTGAGTTTTAACATGGA+TGG | + | chr8.2:1418420-1418439 | MS.gene68879:intron | 30.0% |
| !! | TCTCTGAAGTGATCAATATT+AGG | - | chr8.2:1422271-1422290 | None:intergenic | 30.0% |
| !! | TGATTTTGATGCTAAACCAA+TGG | + | chr8.2:1420323-1420342 | MS.gene68879:CDS | 30.0% |
| !!! | ACTAAGAGACAAGGTTTTTT+AGG | + | chr8.2:1418341-1418360 | MS.gene68879:CDS | 30.0% |
| !!! | TATAAATGTTGTTTTGCCTG+TGG | - | chr8.2:1420370-1420389 | None:intergenic | 30.0% |
| !!! | TTTACAGATTTTGAAGCAAC+TGG | - | chr8.2:1419646-1419665 | None:intergenic | 30.0% |
| AAAGATCAAACTTCCAGTCA+TGG | + | chr8.2:1419335-1419354 | MS.gene68879:CDS | 35.0% | |
| AACATACAGCTCATTTCTGT+GGG | + | chr8.2:1418488-1418507 | MS.gene68879:intron | 35.0% | |
| AACGATAGGCCTATAAATGA+AGG | + | chr8.2:1421738-1421757 | MS.gene68879:CDS | 35.0% | |
| AATACGCGTTGTGTTGAATA+AGG | + | chr8.2:1421168-1421187 | MS.gene68879:CDS | 35.0% | |
| ACAGACCTAAGAAAATCATC+TGG | + | chr8.2:1419072-1419091 | MS.gene68879:intron | 35.0% | |
| ATATTAGGAAAATCACCAGC+TGG | - | chr8.2:1422256-1422275 | None:intergenic | 35.0% | |
| ATCTTGCAAAACAGGTTCAA+AGG | + | chr8.2:1422218-1422237 | MS.gene68879:intron | 35.0% | |
| ATGATAAGGATGATGAAGTG+AGG | + | chr8.2:1418841-1418860 | MS.gene68879:intron | 35.0% | |
| ATTACCTTACTCTTGACACA+GGG | + | chr8.2:1420517-1420536 | MS.gene68879:intron | 35.0% | |
| CAAAAAGTTCCTGTCCTAAT+GGG | - | chr8.2:1421773-1421792 | None:intergenic | 35.0% | |
| CAAAACAATGTTGTCAATCG+TGG | - | chr8.2:1418799-1418818 | None:intergenic | 35.0% | |
| CAACGAAGTTATGATTTCAC+TGG | + | chr8.2:1421025-1421044 | MS.gene68879:CDS | 35.0% | |
| CAAGGTAGTATCATGATTCA+TGG | + | chr8.2:1420238-1420257 | MS.gene68879:intron | 35.0% | |
| CCAACAAAGCCTTCATTTAT+AGG | - | chr8.2:1421750-1421769 | None:intergenic | 35.0% | |
| CTTACCAAATACATCAGGTT+GGG | - | chr8.2:1419514-1419533 | None:intergenic | 35.0% | |
| GCAGTGACATCAATAATAGA+TGG | + | chr8.2:1420071-1420090 | MS.gene68879:CDS | 35.0% | |
| GTACACTTCATATGTGAACA+AGG | + | chr8.2:1420220-1420239 | MS.gene68879:intron | 35.0% | |
| GTACTCATTGTGTAGCTATT+AGG | + | chr8.2:1418923-1418942 | MS.gene68879:intron | 35.0% | |
| GTTGTCGGAAATATTTAGGT+CGG | - | chr8.2:1421246-1421265 | None:intergenic | 35.0% | |
| TAACATACAGCTCATTTCTG+TGG | + | chr8.2:1418487-1418506 | MS.gene68879:intron | 35.0% | |
| TAGCATCATTTCCACTGATA+CGG | - | chr8.2:1418111-1418130 | None:intergenic | 35.0% | |
| TATTACCTTACTCTTGACAC+AGG | + | chr8.2:1420516-1420535 | MS.gene68879:intron | 35.0% | |
| TATTACTCATTCGTATGACC+AGG | - | chr8.2:1421890-1421909 | None:intergenic | 35.0% | |
| TCAAAAAGTTCCTGTCCTAA+TGG | - | chr8.2:1421774-1421793 | None:intergenic | 35.0% | |
| TCATCAAGATATGCACATGA+AGG | - | chr8.2:1420465-1420484 | None:intergenic | 35.0% | |
| TCTTACCAAATACATCAGGT+TGG | - | chr8.2:1419515-1419534 | None:intergenic | 35.0% | |
| TCTTGCAAAACAGGTTCAAA+GGG | + | chr8.2:1422219-1422238 | MS.gene68879:intron | 35.0% | |
| TGAAGAAATTGTATGTGGAG+CGG | + | chr8.2:1420096-1420115 | MS.gene68879:CDS | 35.0% | |
| TGTCAAAATGGGCACAAATT+TGG | - | chr8.2:1419682-1419701 | None:intergenic | 35.0% | |
| TTGAATGAGCTGAAAAGTCA+AGG | - | chr8.2:1421720-1421739 | None:intergenic | 35.0% | |
| TTGCTAAGATGTGAATATCC+AGG | + | chr8.2:1420396-1420415 | MS.gene68879:CDS | 35.0% | |
| TTTATAGTATGCTCTTGTGG+CGG | + | chr8.2:1418577-1418596 | MS.gene68879:intron | 35.0% | |
| ! | CACGATTGACAACATTGTTT+TGG | + | chr8.2:1418797-1418816 | MS.gene68879:intron | 35.0% |
| ! | CCTATAAATGAAGGCTTTGT+TGG | + | chr8.2:1421747-1421766 | MS.gene68879:CDS | 35.0% |
| ! | CGTTTTATAGTATGCTCTTG+TGG | + | chr8.2:1418574-1418593 | MS.gene68879:intron | 35.0% |
| ! | CTCTTTCTTAGCATTTTTGC+AGG | + | chr8.2:1421577-1421596 | MS.gene68879:intron | 35.0% |
| ! | GTGCATATCTTGATGATAGA+GGG | + | chr8.2:1420469-1420488 | MS.gene68879:intron | 35.0% |
| ! | TATCCAGGTTAGTTATGTTG+TGG | + | chr8.2:1420411-1420430 | MS.gene68879:intron | 35.0% |
| ! | TGCATATCTTGATGATAGAG+GGG | + | chr8.2:1420470-1420489 | MS.gene68879:intron | 35.0% |
| ! | TGGGTTGAAGAAATTGTATG+TGG | + | chr8.2:1420091-1420110 | MS.gene68879:CDS | 35.0% |
| ! | TGGTACGCATTTTTACAGAT+TGG | - | chr8.2:1419781-1419800 | None:intergenic | 35.0% |
| ! | TGTGCATATCTTGATGATAG+AGG | + | chr8.2:1420468-1420487 | MS.gene68879:intron | 35.0% |
| ! | TTTTCAGCTCATTCAACGAT+AGG | + | chr8.2:1421724-1421743 | MS.gene68879:intron | 35.0% |
| !! | AGGACAGGAACTTTTTGAAA+AGG | + | chr8.2:1421776-1421795 | MS.gene68879:CDS | 35.0% |
| !! | ATTTCACTGGTGTTATATCG+TGG | + | chr8.2:1421038-1421057 | MS.gene68879:CDS | 35.0% |
| !! | CTTGGTTGTTGTTGTAGTTT+TGG | + | chr8.2:1421529-1421548 | MS.gene68879:intron | 35.0% |
| !! | TTGCTGTTTCAGTATTCCTT+AGG | - | chr8.2:1419052-1419071 | None:intergenic | 35.0% |
| AAAATCACTGTCGGTCTGAA+AGG | - | chr8.2:1420310-1420329 | None:intergenic | 40.0% | |
| AAACCAATGGTCATGCTTCT+TGG | + | chr8.2:1420336-1420355 | MS.gene68879:CDS | 40.0% | |
| AAAGTTGTCAGGCCACTAAA+AGG | - | chr8.2:1420809-1420828 | None:intergenic | 40.0% | |
| AAATCACTGTCGGTCTGAAA+GGG | - | chr8.2:1420309-1420328 | None:intergenic | 40.0% | |
| AATCGATAAGTGACCTCCAA+TGG | - | chr8.2:1420128-1420147 | None:intergenic | 40.0% | |
| AATGCCCAACCTGATGTATT+TGG | + | chr8.2:1419507-1419526 | MS.gene68879:CDS | 40.0% | |
| ACACCAAACACGTCATGATA+AGG | + | chr8.2:1418827-1418846 | MS.gene68879:intron | 40.0% | |
| ACATTGAAACGTACCAGCAA+TGG | + | chr8.2:1417957-1417976 | MS.gene68879:CDS | 40.0% | |
| ACGAACTACCAAAAGTTGTC+AGG | - | chr8.2:1420820-1420839 | None:intergenic | 40.0% | |
| ACTTCATGAACCACCTAAAG+AGG | + | chr8.2:1419129-1419148 | MS.gene68879:intron | 40.0% | |
| AGCTGCAGTATTACAGTACA+GGG | - | chr8.2:1421299-1421318 | None:intergenic | 40.0% | |
| ATCAAACTTCCAGTCATGGA+AGG | + | chr8.2:1419339-1419358 | MS.gene68879:CDS | 40.0% | |
| ATCATAGGTTTGGGCTATTG+CGG | + | chr8.2:1418316-1418335 | MS.gene68879:intron | 40.0% | |
| ATGATCTCTAATGCCCCAAA+AGG | - | chr8.2:1420660-1420679 | None:intergenic | 40.0% | |
| ATTGCGGATACTAAGAGACA+AGG | + | chr8.2:1418332-1418351 | MS.gene68879:CDS | 40.0% | |
| CAACCACAACATAACTAACC+TGG | - | chr8.2:1420417-1420436 | None:intergenic | 40.0% | |
| CACGTCTTACCAAATACATC+AGG | - | chr8.2:1419519-1419538 | None:intergenic | 40.0% | |
| CATCCTTATCATGACGTGTT+TGG | - | chr8.2:1418833-1418852 | None:intergenic | 40.0% | |
| CGAGTTTGTGAGGATCAAAT+AGG | - | chr8.2:1421093-1421112 | None:intergenic | 40.0% | |
| CTTCATGAACCACCTAAAGA+GGG | + | chr8.2:1419130-1419149 | MS.gene68879:intron | 40.0% | |
| CTTCTTGGTCAATATTCCAC+AGG | + | chr8.2:1420351-1420370 | MS.gene68879:CDS | 40.0% | |
| CTTGCAAATCGCAATTAAGC+TGG | + | chr8.2:1418254-1418273 | MS.gene68879:intron | 40.0% | |
| GAATGTTAGCAAGAAAGCCA+AGG | - | chr8.2:1419859-1419878 | None:intergenic | 40.0% | |
| GGTGGTTCATGAAGTTTACT+AGG | - | chr8.2:1419124-1419143 | None:intergenic | 40.0% | |
| GTTGCTCGACTATAAAAGCA+AGG | - | chr8.2:1419759-1419778 | None:intergenic | 40.0% | |
| TCAGTATTCCTTAGGTCTGT+TGG | - | chr8.2:1419044-1419063 | None:intergenic | 40.0% | |
| TGAATCAGATGATGTACGCA+AGG | + | chr8.2:1419888-1419907 | MS.gene68879:intron | 40.0% | |
| TGTATAAACCTGCTTGAGCT+GGG | - | chr8.2:1418167-1418186 | None:intergenic | 40.0% | |
| TGTGCTCATTCGAAGAAGAA+TGG | - | chr8.2:1417940-1417959 | None:intergenic | 40.0% | |
| TTACCTTACTCTTGACACAG+GGG | + | chr8.2:1420518-1420537 | MS.gene68879:intron | 40.0% | |
| TTGAACCTTAGTGAACACTG+TGG | - | chr8.2:1420703-1420722 | None:intergenic | 40.0% | |
| TTGTATAAACCTGCTTGAGC+TGG | - | chr8.2:1418168-1418187 | None:intergenic | 40.0% | |
| TTGTTCCACAGTGTTCACTA+AGG | + | chr8.2:1420695-1420714 | MS.gene68879:intron | 40.0% | |
| ! | GATATCTAATTTTCCGACGC+TGG | + | chr8.2:1419824-1419843 | MS.gene68879:intron | 40.0% |
| ! | TCCTCTCTGGAGAAAAACAA+AGG | + | chr8.2:1420999-1421018 | MS.gene68879:CDS | 40.0% |
| ! | TGATTGATGGTAGATGGAGA+TGG | + | chr8.2:1418085-1418104 | MS.gene68879:intron | 40.0% |
| ! | TTTAGTGGCCTGACAACTTT+TGG | + | chr8.2:1420809-1420828 | MS.gene68879:CDS | 40.0% |
| ! | TTTGAAGCAACTGGTGGAAA+AGG | - | chr8.2:1419637-1419656 | None:intergenic | 40.0% |
| !! | AGAGTTTGTTACTGCAATGC+AGG | + | chr8.2:1418370-1418389 | MS.gene68879:CDS | 40.0% |
| !! | TGACAGATTTGTTGCTGTCA+TGG | + | chr8.2:1420566-1420585 | MS.gene68879:CDS | 40.0% |
| !!! | ACAGATTTTGAAGCAACTGG+TGG | - | chr8.2:1419643-1419662 | None:intergenic | 40.0% |
| !!! | TCCTTTGTTTTTCTCCAGAG+AGG | - | chr8.2:1421003-1421022 | None:intergenic | 40.0% |
| AATTGCCAACAGAGCAGAAG+TGG | - | chr8.2:1420908-1420927 | None:intergenic | 45.0% | |
| AGCAACAAATCTGTCAGTCG+TGG | - | chr8.2:1420562-1420581 | None:intergenic | 45.0% | |
| ATAACATTTGTGGACACCCC+TGG | + | chr8.2:1420974-1420993 | MS.gene68879:CDS | 45.0% | |
| ATGGAGATGCCTGCAATGAT+GGG | + | chr8.2:1422074-1422093 | MS.gene68879:CDS | 45.0% | |
| ATGTTGTCAATCGTGGCTAG+CGG | - | chr8.2:1418792-1418811 | None:intergenic | 45.0% | |
| ATTGATGTCACTGCACTGAG+AGG | - | chr8.2:1420065-1420084 | None:intergenic | 45.0% | |
| CAACAGAGCAGAAGTGGAAT+TGG | - | chr8.2:1420902-1420921 | None:intergenic | 45.0% | |
| CAAGCTGTAGATGACATGCT+TGG | + | chr8.2:1422346-1422365 | MS.gene68879:CDS | 45.0% | |
| CAATACTCTCCCTCTTTAGG+TGG | - | chr8.2:1419142-1419161 | None:intergenic | 45.0% | |
| CAATTCCACTTCTGCTCTGT+TGG | + | chr8.2:1420900-1420919 | MS.gene68879:intron | 45.0% | |
| CGAGTGATTTACTCTCTACG+CGG | + | chr8.2:1421133-1421152 | MS.gene68879:CDS | 45.0% | |
| CTGCAGCTCATGAGAGTTTA+TGG | + | chr8.2:1421311-1421330 | MS.gene68879:intron | 45.0% | |
| GACCAATACTCTCCCTCTTT+AGG | - | chr8.2:1419145-1419164 | None:intergenic | 45.0% | |
| GACGCATTAGTAGCTGTAAG+TGG | + | chr8.2:1419366-1419385 | MS.gene68879:intron | 45.0% | |
| GAGCTGCAGTATTACAGTAC+AGG | - | chr8.2:1421300-1421319 | None:intergenic | 45.0% | |
| GCAAAGCTAAGGTGCAACAA+AGG | + | chr8.2:1422096-1422115 | MS.gene68879:CDS | 45.0% | |
| GCAACAAATCTGTCAGTCGT+GGG | - | chr8.2:1420561-1420580 | None:intergenic | 45.0% | |
| GCGAAAACAATGTGAAGCAC+AGG | - | chr8.2:1421632-1421651 | None:intergenic | 45.0% | |
| GCTCGACTATAAAAGCAAGG+CGG | - | chr8.2:1419756-1419775 | None:intergenic | 45.0% | |
| GTATAAACCTGCTTGAGCTG+GGG | - | chr8.2:1418166-1418185 | None:intergenic | 45.0% | |
| GTCTGAAAGGGACAAATCAG+AGG | - | chr8.2:1420297-1420316 | None:intergenic | 45.0% | |
| GTTGTCAAGTAGCGCTATAG+TGG | + | chr8.2:1418720-1418739 | MS.gene68879:intron | 45.0% | |
| TATAAACCTGCTTGAGCTGG+GGG | - | chr8.2:1418165-1418184 | None:intergenic | 45.0% | |
| TCACTGATGTCGAGTTTGTG+AGG | - | chr8.2:1421103-1421122 | None:intergenic | 45.0% | |
| TCGACAGCTACAGTATTTCC+AGG | - | chr8.2:1420776-1420795 | None:intergenic | 45.0% | |
| TGAAACAGCCAACAGACCTA+AGG | + | chr8.2:1419033-1419052 | MS.gene68879:intron | 45.0% | |
| TGTGGAGCGGTTAAAACCAT+TGG | + | chr8.2:1420109-1420128 | MS.gene68879:CDS | 45.0% | |
| ! | ATTCCAAGAAAGGCGTGTGA+CGG | + | chr8.2:1421831-1421850 | MS.gene68879:CDS | 45.0% |
| ! | CACCTAAAGAGGGAGAGTAT+TGG | + | chr8.2:1419140-1419159 | MS.gene68879:intron | 45.0% |
| ! | GATGCTAGCATGCCTTTTAG+TGG | + | chr8.2:1420794-1420813 | MS.gene68879:CDS | 45.0% |
| ! | TGACCAAGAAGCATGACCAT+TGG | - | chr8.2:1420342-1420361 | None:intergenic | 45.0% |
| ! | TGGTTCATCTTAGCCGATTC+AGG | + | chr8.2:1417977-1417996 | MS.gene68879:CDS | 45.0% |
| ! | TGTAGTCTGGAACTGATGAG+AGG | + | chr8.2:1420744-1420763 | MS.gene68879:intron | 45.0% |
| ! | TTTTCCGACGCTGGAATGAA+AGG | + | chr8.2:1419833-1419852 | MS.gene68879:intron | 45.0% |
| !! | GAGTTTATGGAGCACTGATG+TGG | + | chr8.2:1421324-1421343 | MS.gene68879:CDS | 45.0% |
| !! | TGCAATGATGGGCAAAGCTA+AGG | + | chr8.2:1422085-1422104 | MS.gene68879:CDS | 45.0% |
| !! | TTAGCTTTGCCCATCATTGC+AGG | - | chr8.2:1422086-1422105 | None:intergenic | 45.0% |
| AAGGCCTTTCATTCCAGCGT+CGG | - | chr8.2:1419840-1419859 | None:intergenic | 50.0% | |
| ACAGCTCATTTCTGTGGGAC+AGG | + | chr8.2:1418493-1418512 | MS.gene68879:intron | 50.0% | |
| CGGCTAAGATGAACCATTGC+TGG | - | chr8.2:1417973-1417992 | None:intergenic | 50.0% | |
| CTTTGTTGGCCCATTAGGAC+AGG | + | chr8.2:1421761-1421780 | MS.gene68879:CDS | 50.0% | |
| GATGGAGATGCCTGCAATGA+TGG | + | chr8.2:1422073-1422092 | MS.gene68879:CDS | 50.0% | |
| GGAGCGGTTAAAACCATTGG+AGG | + | chr8.2:1420112-1420131 | MS.gene68879:CDS | 50.0% | |
| TCGTGGCTAGCGGAAAATAG+CGG | - | chr8.2:1418782-1418801 | None:intergenic | 50.0% | |
| TTTCTCCAGAGAGGACACCA+GGG | - | chr8.2:1420994-1421013 | None:intergenic | 50.0% | |
| ! | CTTGACACAGGGGCACATAT+TGG | + | chr8.2:1420528-1420547 | MS.gene68879:intron | 50.0% |
| ! | TTTTCTCCAGAGAGGACACC+AGG | - | chr8.2:1420995-1421014 | None:intergenic | 50.0% |
| !! | ACTGATGAGAGGAGCATTCC+TGG | + | chr8.2:1420755-1420774 | MS.gene68879:CDS | 50.0% |
| !! | ACTTAGGTACTGGTCAGCCT+CGG | + | chr8.2:1419611-1419630 | MS.gene68879:intron | 50.0% |
| !! | GAAGGCTTTGTTGGCCCATT+AGG | + | chr8.2:1421756-1421775 | MS.gene68879:CDS | 50.0% |
| !! | GGAGCACTGATGTGGTCTTT+GGG | + | chr8.2:1421332-1421351 | MS.gene68879:CDS | 50.0% |
| !! | TGGAGCACTGATGTGGTCTT+TGG | + | chr8.2:1421331-1421350 | MS.gene68879:CDS | 50.0% |
| AATCTGTCAGTCGTGGGCTC+TGG | - | chr8.2:1420555-1420574 | None:intergenic | 55.0% | |
| AGGGAGTTTCATCTGCCAGC+TGG | + | chr8.2:1422238-1422257 | MS.gene68879:CDS | 55.0% | |
| CTCATTTCTGTGGGACAGGC+GGG | + | chr8.2:1418497-1418516 | MS.gene68879:CDS | 55.0% | |
| GACGCTGGAATGAAAGGCCT+TGG | + | chr8.2:1419839-1419858 | MS.gene68879:intron | 55.0% | |
| GATGGAGATGGCCGTATCAG+TGG | + | chr8.2:1418097-1418116 | MS.gene68879:intron | 55.0% | |
| GCTCATTTCTGTGGGACAGG+CGG | + | chr8.2:1418496-1418515 | MS.gene68879:intron | 55.0% | |
| GTGCCCCTGTGTCAAGAGTA+AGG | - | chr8.2:1420524-1420543 | None:intergenic | 55.0% | |
| TCATTTCTGTGGGACAGGCG+GGG | + | chr8.2:1418498-1418517 | MS.gene68879:CDS | 55.0% | |
| TTCTCCAGAGAGGACACCAG+GGG | - | chr8.2:1420993-1421012 | None:intergenic | 55.0% | |
| ! | AAGAAAGGCGTGTGACGGTC+GGG | + | chr8.2:1421836-1421855 | MS.gene68879:CDS | 55.0% |
| ! | CAAGAAAGGCGTGTGACGGT+CGG | + | chr8.2:1421835-1421854 | MS.gene68879:CDS | 55.0% |
| !! | GCGTCGATTCCTTCCATGAC+TGG | - | chr8.2:1419351-1419370 | None:intergenic | 55.0% |
| CGACCGTCACACGCCTTTCT+TGG | - | chr8.2:1421837-1421856 | None:intergenic | 60.0% | |
| GCAACTGGTGGAAAAGGCCG+AGG | - | chr8.2:1419631-1419650 | None:intergenic | 60.0% | |
| GACACCCCTGGTGTCCTCTC+TGG | + | chr8.2:1420986-1421005 | MS.gene68879:CDS | 65.0% | |
| GAGCTGGGGGCGAGACAAGT+TGG | - | chr8.2:1418152-1418171 | None:intergenic | 65.0% | |
| GTCTCGCCCCCAGCTCAAGC+AGG | + | chr8.2:1418156-1418175 | MS.gene68879:CDS | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr8.2 | gene | 1417914 | 1422417 | 1417914 | ID=MS.gene68879 |
| chr8.2 | mRNA | 1417914 | 1422417 | 1417914 | ID=MS.gene68879.t1;Parent=MS.gene68879 |
| chr8.2 | exon | 1417914 | 1417998 | 1417914 | ID=MS.gene68879.t1.exon1;Parent=MS.gene68879.t1 |
| chr8.2 | CDS | 1417914 | 1417998 | 1417914 | ID=cds.MS.gene68879.t1;Parent=MS.gene68879.t1 |
| chr8.2 | exon | 1418098 | 1418177 | 1418098 | ID=MS.gene68879.t1.exon2;Parent=MS.gene68879.t1 |
| chr8.2 | CDS | 1418098 | 1418177 | 1418098 | ID=cds.MS.gene68879.t1;Parent=MS.gene68879.t1 |
| chr8.2 | exon | 1418323 | 1418391 | 1418323 | ID=MS.gene68879.t1.exon3;Parent=MS.gene68879.t1 |
| chr8.2 | CDS | 1418323 | 1418391 | 1418323 | ID=cds.MS.gene68879.t1;Parent=MS.gene68879.t1 |
| chr8.2 | exon | 1418497 | 1418554 | 1418497 | ID=MS.gene68879.t1.exon4;Parent=MS.gene68879.t1 |
| chr8.2 | CDS | 1418497 | 1418554 | 1418497 | ID=cds.MS.gene68879.t1;Parent=MS.gene68879.t1 |
| chr8.2 | exon | 1419325 | 1419380 | 1419325 | ID=MS.gene68879.t1.exon5;Parent=MS.gene68879.t1 |
| chr8.2 | CDS | 1419325 | 1419380 | 1419325 | ID=cds.MS.gene68879.t1;Parent=MS.gene68879.t1 |
| chr8.2 | exon | 1419486 | 1419528 | 1419486 | ID=MS.gene68879.t1.exon6;Parent=MS.gene68879.t1 |
| chr8.2 | CDS | 1419486 | 1419528 | 1419486 | ID=cds.MS.gene68879.t1;Parent=MS.gene68879.t1 |
| chr8.2 | exon | 1419617 | 1419669 | 1419617 | ID=MS.gene68879.t1.exon7;Parent=MS.gene68879.t1 |
| chr8.2 | CDS | 1419617 | 1419669 | 1419617 | ID=cds.MS.gene68879.t1;Parent=MS.gene68879.t1 |
| chr8.2 | exon | 1420059 | 1420172 | 1420059 | ID=MS.gene68879.t1.exon8;Parent=MS.gene68879.t1 |
| chr8.2 | CDS | 1420059 | 1420172 | 1420059 | ID=cds.MS.gene68879.t1;Parent=MS.gene68879.t1 |
| chr8.2 | exon | 1420315 | 1420417 | 1420315 | ID=MS.gene68879.t1.exon9;Parent=MS.gene68879.t1 |
| chr8.2 | CDS | 1420315 | 1420417 | 1420315 | ID=cds.MS.gene68879.t1;Parent=MS.gene68879.t1 |
| chr8.2 | exon | 1420538 | 1420587 | 1420538 | ID=MS.gene68879.t1.exon10;Parent=MS.gene68879.t1 |
| chr8.2 | CDS | 1420538 | 1420587 | 1420538 | ID=cds.MS.gene68879.t1;Parent=MS.gene68879.t1 |
| chr8.2 | exon | 1420749 | 1420877 | 1420749 | ID=MS.gene68879.t1.exon11;Parent=MS.gene68879.t1 |
| chr8.2 | CDS | 1420749 | 1420877 | 1420749 | ID=cds.MS.gene68879.t1;Parent=MS.gene68879.t1 |
| chr8.2 | exon | 1420962 | 1421213 | 1420962 | ID=MS.gene68879.t1.exon12;Parent=MS.gene68879.t1 |
| chr8.2 | CDS | 1420962 | 1421213 | 1420962 | ID=cds.MS.gene68879.t1;Parent=MS.gene68879.t1 |
| chr8.2 | exon | 1421317 | 1421396 | 1421317 | ID=MS.gene68879.t1.exon13;Parent=MS.gene68879.t1 |
| chr8.2 | CDS | 1421317 | 1421396 | 1421317 | ID=cds.MS.gene68879.t1;Parent=MS.gene68879.t1 |
| chr8.2 | exon | 1421731 | 1421857 | 1421731 | ID=MS.gene68879.t1.exon14;Parent=MS.gene68879.t1 |
| chr8.2 | CDS | 1421731 | 1421857 | 1421731 | ID=cds.MS.gene68879.t1;Parent=MS.gene68879.t1 |
| chr8.2 | exon | 1422008 | 1422151 | 1422008 | ID=MS.gene68879.t1.exon15;Parent=MS.gene68879.t1 |
| chr8.2 | CDS | 1422008 | 1422151 | 1422008 | ID=cds.MS.gene68879.t1;Parent=MS.gene68879.t1 |
| chr8.2 | exon | 1422232 | 1422417 | 1422232 | ID=MS.gene68879.t1.exon16;Parent=MS.gene68879.t1 |
| chr8.2 | CDS | 1422232 | 1422417 | 1422232 | ID=cds.MS.gene68879.t1;Parent=MS.gene68879.t1 |
| Gene Sequence |
| Protein sequence |
