Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68991.t1 | XP_013441908.1 | 71.8 | 464 | 17 | 1 | 1 | 350 | 1 | 464 | 7.90E-174 | 619.8 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68991.t1 | Q9AR73 | 43.0 | 302 | 166 | 5 | 1 | 300 | 1 | 298 | 2.1e-66 | 254.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68991.t1 | G8A0P3 | 71.8 | 464 | 17 | 1 | 1 | 350 | 1 | 464 | 5.7e-174 | 619.8 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059604 | MS.gene68991 | 0.904425 | 1.24E-79 | -1.69E-46 |
| MS.gene059634 | MS.gene68991 | 0.805895 | 1.07E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68991.t1 | MTR_6g488280 | 95.333 | 300 | 14 | 0 | 1 | 300 | 1 | 300 | 0.0 | 595 |
| MS.gene68991.t1 | MTR_6g488280 | 94.000 | 50 | 3 | 0 | 301 | 350 | 415 | 464 | 7.00e-21 | 93.6 |
| MS.gene68991.t1 | MTR_0428s0010 | 95.333 | 300 | 14 | 0 | 1 | 300 | 1 | 300 | 0.0 | 595 |
| MS.gene68991.t1 | MTR_0428s0010 | 94.000 | 50 | 3 | 0 | 301 | 350 | 415 | 464 | 7.00e-21 | 93.6 |
| MS.gene68991.t1 | MTR_6g023665 | 88.667 | 300 | 34 | 0 | 1 | 300 | 8 | 307 | 0.0 | 552 |
| MS.gene68991.t1 | MTR_6g023665 | 92.000 | 50 | 4 | 0 | 301 | 350 | 422 | 471 | 6.22e-21 | 94.0 |
| MS.gene68991.t1 | MTR_8g006730 | 69.408 | 304 | 87 | 4 | 1 | 300 | 1 | 302 | 7.96e-148 | 426 |
| MS.gene68991.t1 | MTR_8g006730 | 77.551 | 49 | 11 | 0 | 301 | 349 | 417 | 465 | 8.92e-15 | 75.5 |
| MS.gene68991.t1 | MTR_8g006710 | 68.647 | 303 | 90 | 3 | 1 | 300 | 1 | 301 | 2.61e-147 | 424 |
| MS.gene68991.t1 | MTR_8g006710 | 72.340 | 47 | 13 | 0 | 301 | 347 | 416 | 462 | 1.54e-12 | 68.6 |
| MS.gene68991.t1 | MTR_8g465670 | 56.146 | 301 | 127 | 3 | 2 | 300 | 3 | 300 | 7.44e-115 | 342 |
| MS.gene68991.t1 | MTR_8g006220 | 56.291 | 302 | 127 | 3 | 1 | 300 | 1 | 299 | 1.26e-114 | 341 |
| MS.gene68991.t1 | MTR_0184s0040 | 43.934 | 305 | 163 | 6 | 1 | 300 | 16 | 317 | 1.46e-78 | 249 |
| MS.gene68991.t1 | MTR_0078s0190 | 43.934 | 305 | 163 | 6 | 1 | 300 | 16 | 317 | 1.46e-78 | 249 |
| MS.gene68991.t1 | MTR_0078s0200 | 42.997 | 307 | 164 | 6 | 1 | 300 | 1 | 303 | 7.92e-78 | 241 |
| MS.gene68991.t1 | MTR_0078s0010 | 42.951 | 305 | 166 | 6 | 1 | 300 | 1 | 302 | 1.98e-76 | 243 |
| MS.gene68991.t1 | MTR_0184s0030 | 42.997 | 307 | 164 | 6 | 1 | 300 | 1 | 303 | 1.05e-75 | 241 |
| MS.gene68991.t1 | MTR_8g008990 | 42.763 | 304 | 167 | 5 | 1 | 300 | 1 | 301 | 2.61e-74 | 237 |
| MS.gene68991.t1 | MTR_7g047030 | 42.295 | 305 | 168 | 6 | 1 | 300 | 1 | 302 | 2.87e-74 | 237 |
| MS.gene68991.t1 | MTR_7g047270 | 42.295 | 305 | 168 | 6 | 1 | 300 | 1 | 302 | 2.87e-74 | 237 |
| MS.gene68991.t1 | MTR_8g009050 | 42.763 | 304 | 167 | 6 | 1 | 300 | 1 | 301 | 4.28e-74 | 237 |
| MS.gene68991.t1 | MTR_8g009055 | 42.434 | 304 | 168 | 5 | 1 | 300 | 1 | 301 | 1.40e-73 | 235 |
| MS.gene68991.t1 | MTR_8g009073 | 42.763 | 304 | 167 | 6 | 1 | 300 | 1 | 301 | 1.52e-73 | 235 |
| MS.gene68991.t1 | MTR_0078s0060 | 43.750 | 304 | 164 | 6 | 1 | 300 | 1 | 301 | 2.12e-73 | 235 |
| MS.gene68991.t1 | MTR_8g009063 | 43.092 | 304 | 166 | 5 | 1 | 300 | 8 | 308 | 6.28e-73 | 234 |
| MS.gene68991.t1 | MTR_8g009067 | 43.750 | 304 | 164 | 5 | 1 | 300 | 1 | 301 | 1.57e-72 | 233 |
| MS.gene68991.t1 | MTR_7g046490 | 44.518 | 301 | 163 | 4 | 1 | 300 | 1 | 298 | 7.78e-72 | 231 |
| MS.gene68991.t1 | MTR_1g019510 | 40.728 | 302 | 174 | 4 | 1 | 300 | 1 | 299 | 2.13e-71 | 230 |
| MS.gene68991.t1 | MTR_8g008970 | 43.092 | 304 | 166 | 5 | 1 | 300 | 1 | 301 | 3.80e-68 | 228 |
| MS.gene68991.t1 | MTR_8g008970 | 42.718 | 103 | 55 | 2 | 191 | 289 | 527 | 629 | 3.04e-16 | 80.5 |
| MS.gene68991.t1 | MTR_7g117170 | 42.617 | 298 | 164 | 5 | 7 | 300 | 16 | 310 | 4.74e-68 | 221 |
| MS.gene68991.t1 | MTR_8g027885 | 39.744 | 312 | 177 | 8 | 7 | 316 | 19 | 321 | 7.42e-68 | 221 |
| MS.gene68991.t1 | MTR_8g077590 | 42.000 | 300 | 163 | 6 | 7 | 300 | 10 | 304 | 6.51e-67 | 218 |
| MS.gene68991.t1 | MTR_8g027870 | 36.261 | 353 | 206 | 8 | 7 | 348 | 19 | 363 | 1.39e-65 | 215 |
| MS.gene68991.t1 | MTR_8g006270 | 39.869 | 306 | 170 | 8 | 1 | 300 | 1 | 298 | 2.62e-61 | 203 |
| MS.gene68991.t1 | MTR_6g005600 | 38.487 | 304 | 180 | 5 | 1 | 300 | 1 | 301 | 1.00e-60 | 202 |
| MS.gene68991.t1 | MTR_8g006260 | 38.339 | 313 | 176 | 9 | 1 | 302 | 1 | 307 | 2.29e-58 | 196 |
| MS.gene68991.t1 | MTR_8g012745 | 39.935 | 308 | 173 | 6 | 1 | 300 | 1 | 304 | 2.77e-56 | 191 |
| MS.gene68991.t1 | MTR_8g012650 | 38.961 | 308 | 176 | 6 | 1 | 300 | 1 | 304 | 2.25e-54 | 185 |
| MS.gene68991.t1 | MTR_8g012635 | 38.636 | 308 | 177 | 6 | 1 | 300 | 1 | 304 | 3.50e-54 | 185 |
| MS.gene68991.t1 | MTR_3g009510 | 30.645 | 310 | 199 | 6 | 4 | 300 | 3 | 309 | 8.12e-46 | 163 |
| MS.gene68991.t1 | MTR_8g012630 | 34.653 | 303 | 140 | 4 | 1 | 300 | 1 | 248 | 2.31e-44 | 157 |
| MS.gene68991.t1 | MTR_8g006230 | 43.077 | 195 | 105 | 5 | 109 | 300 | 52 | 243 | 4.40e-44 | 153 |
| MS.gene68991.t1 | MTR_6g033625 | 33.439 | 314 | 186 | 7 | 4 | 300 | 2 | 309 | 3.03e-43 | 155 |
| MS.gene68991.t1 | MTR_8g009067 | 44.865 | 185 | 95 | 5 | 120 | 300 | 2 | 183 | 1.24e-41 | 149 |
| MS.gene68991.t1 | MTR_8g074550 | 34.603 | 315 | 182 | 12 | 5 | 305 | 7 | 311 | 9.79e-40 | 147 |
| MS.gene68991.t1 | MTR_6g033615 | 30.519 | 308 | 189 | 6 | 4 | 300 | 2 | 295 | 8.99e-39 | 143 |
| MS.gene68991.t1 | MTR_6g005660 | 34.800 | 250 | 156 | 5 | 1 | 246 | 1 | 247 | 3.24e-38 | 137 |
| MS.gene68991.t1 | MTR_5g090630 | 32.573 | 307 | 184 | 11 | 3 | 299 | 2 | 295 | 1.07e-37 | 140 |
| MS.gene68991.t1 | MTR_5g019580 | 29.712 | 313 | 186 | 8 | 9 | 300 | 10 | 309 | 1.74e-37 | 140 |
| MS.gene68991.t1 | MTR_5g070040 | 33.544 | 316 | 183 | 13 | 1 | 299 | 6 | 311 | 4.72e-37 | 139 |
| MS.gene68991.t1 | MTR_6g033660 | 30.323 | 310 | 194 | 7 | 7 | 300 | 5 | 308 | 7.66e-37 | 139 |
| MS.gene68991.t1 | MTR_5g090670 | 31.111 | 315 | 187 | 11 | 4 | 299 | 3 | 306 | 1.57e-36 | 137 |
| MS.gene68991.t1 | MTR_8g009073 | 42.857 | 175 | 93 | 6 | 130 | 300 | 1 | 172 | 7.59e-36 | 133 |
| MS.gene68991.t1 | MTR_6g033725 | 29.819 | 332 | 194 | 9 | 4 | 314 | 2 | 315 | 1.06e-35 | 135 |
| MS.gene68991.t1 | MTR_5g090700 | 29.721 | 323 | 203 | 10 | 4 | 310 | 3 | 317 | 2.03e-35 | 135 |
| MS.gene68991.t1 | MTR_5g070090 | 30.892 | 314 | 186 | 10 | 10 | 304 | 15 | 316 | 5.82e-35 | 133 |
| MS.gene68991.t1 | MTR_6g033675 | 29.394 | 330 | 210 | 9 | 4 | 316 | 2 | 325 | 5.72e-34 | 130 |
| MS.gene68991.t1 | MTR_5g090600 | 29.794 | 339 | 214 | 10 | 3 | 330 | 2 | 327 | 1.82e-33 | 129 |
| MS.gene68991.t1 | MTR_5g098930 | 30.719 | 306 | 191 | 11 | 4 | 299 | 3 | 297 | 3.21e-33 | 128 |
| MS.gene68991.t1 | MTR_5g090580 | 30.351 | 313 | 190 | 10 | 4 | 299 | 3 | 304 | 1.95e-32 | 126 |
| MS.gene68991.t1 | MTR_5g090660 | 30.000 | 310 | 195 | 10 | 3 | 299 | 2 | 302 | 1.59e-31 | 125 |
| MS.gene68991.t1 | MTR_5g090620 | 29.582 | 311 | 195 | 9 | 4 | 299 | 3 | 304 | 3.08e-31 | 123 |
| MS.gene68991.t1 | MTR_2g040530 | 28.803 | 309 | 200 | 8 | 3 | 299 | 2 | 302 | 2.54e-29 | 117 |
| MS.gene68991.t1 | MTR_2g046750 | 29.126 | 309 | 192 | 8 | 7 | 299 | 6 | 303 | 2.89e-29 | 117 |
| MS.gene68991.t1 | MTR_5g090610 | 28.758 | 306 | 190 | 9 | 4 | 299 | 3 | 290 | 5.23e-29 | 117 |
| MS.gene68991.t1 | MTR_5g019580 | 30.065 | 306 | 166 | 11 | 9 | 300 | 62 | 333 | 1.60e-28 | 116 |
| MS.gene68991.t1 | MTR_2g046820 | 28.383 | 303 | 199 | 7 | 7 | 299 | 6 | 300 | 6.98e-28 | 114 |
| MS.gene68991.t1 | MTR_5g464760 | 27.434 | 339 | 192 | 13 | 2 | 300 | 8 | 332 | 1.59e-23 | 101 |
| MS.gene68991.t1 | MTR_3g009500 | 27.451 | 255 | 168 | 6 | 4 | 244 | 3 | 254 | 1.57e-22 | 95.9 |
| MS.gene68991.t1 | MTR_8g012730 | 39.490 | 157 | 76 | 4 | 144 | 300 | 4 | 141 | 2.53e-22 | 95.9 |
| MS.gene68991.t1 | MTR_5g464810 | 27.811 | 338 | 190 | 14 | 2 | 300 | 8 | 330 | 2.73e-22 | 97.8 |
| MS.gene68991.t1 | MTR_5g064240 | 27.811 | 338 | 190 | 14 | 2 | 300 | 8 | 330 | 2.73e-22 | 97.8 |
| MS.gene68991.t1 | MTR_4g082810 | 27.778 | 324 | 198 | 12 | 7 | 308 | 8 | 317 | 9.58e-22 | 95.9 |
| MS.gene68991.t1 | MTR_6g078320 | 26.829 | 328 | 206 | 10 | 7 | 308 | 12 | 331 | 1.82e-21 | 95.5 |
| MS.gene68991.t1 | MTR_5g090650 | 25.081 | 307 | 181 | 12 | 4 | 299 | 3 | 271 | 1.46e-20 | 91.3 |
| MS.gene68991.t1 | MTR_3g009520 | 27.132 | 258 | 171 | 6 | 1 | 244 | 1 | 255 | 1.47e-20 | 90.1 |
| MS.gene68991.t1 | MTR_3g069690 | 28.173 | 323 | 182 | 11 | 2 | 300 | 3 | 299 | 1.62e-20 | 92.8 |
| MS.gene68991.t1 | MTR_2g008210 | 27.134 | 328 | 188 | 14 | 9 | 300 | 14 | 326 | 6.60e-20 | 90.9 |
| MS.gene68991.t1 | MTR_0036s0220 | 27.353 | 340 | 179 | 15 | 7 | 300 | 13 | 330 | 7.54e-20 | 90.9 |
| MS.gene68991.t1 | MTR_6g014290 | 27.246 | 334 | 189 | 13 | 7 | 300 | 11 | 330 | 1.39e-19 | 90.1 |
| MS.gene68991.t1 | MTR_8g068330 | 26.064 | 376 | 225 | 13 | 2 | 348 | 4 | 355 | 2.06e-18 | 86.3 |
| MS.gene68991.t1 | MTR_7g013180 | 25.723 | 311 | 194 | 8 | 10 | 300 | 9 | 302 | 2.32e-18 | 86.3 |
| MS.gene68991.t1 | MTR_2g098430 | 24.620 | 329 | 201 | 12 | 1 | 300 | 1 | 311 | 9.23e-18 | 84.7 |
| MS.gene68991.t1 | MTR_2g008220 | 28.190 | 337 | 204 | 12 | 7 | 321 | 15 | 335 | 1.40e-17 | 84.0 |
| MS.gene68991.t1 | MTR_3g479490 | 27.887 | 355 | 171 | 18 | 1 | 300 | 1 | 325 | 1.40e-17 | 84.0 |
| MS.gene68991.t1 | MTR_6g014220 | 25.758 | 330 | 197 | 12 | 8 | 300 | 12 | 330 | 1.50e-17 | 84.0 |
| MS.gene68991.t1 | MTR_4g094220 | 25.797 | 345 | 183 | 15 | 7 | 300 | 8 | 330 | 3.71e-17 | 82.8 |
| MS.gene68991.t1 | MTR_4g082820 | 27.052 | 329 | 191 | 12 | 7 | 308 | 8 | 314 | 4.42e-17 | 82.4 |
| MS.gene68991.t1 | MTR_5g035560 | 25.140 | 358 | 193 | 13 | 3 | 323 | 8 | 327 | 8.90e-17 | 81.6 |
| MS.gene68991.t1 | MTR_5g090690 | 27.966 | 236 | 127 | 6 | 75 | 299 | 31 | 234 | 1.04e-16 | 80.9 |
| MS.gene68991.t1 | MTR_5g058320 | 26.984 | 315 | 199 | 10 | 8 | 300 | 12 | 317 | 1.55e-16 | 80.9 |
| MS.gene68991.t1 | MTR_6g038240 | 24.852 | 338 | 189 | 13 | 9 | 312 | 14 | 320 | 1.84e-16 | 80.5 |
| MS.gene68991.t1 | MTR_6g038300 | 27.714 | 350 | 187 | 16 | 1 | 311 | 1 | 323 | 2.04e-16 | 80.5 |
| MS.gene68991.t1 | MTR_3g069710 | 27.508 | 309 | 190 | 11 | 7 | 300 | 13 | 302 | 2.32e-16 | 80.1 |
| MS.gene68991.t1 | MTR_4g064987 | 27.389 | 314 | 195 | 14 | 1 | 300 | 1 | 295 | 2.55e-16 | 80.1 |
| MS.gene68991.t1 | MTR_4g064987 | 27.796 | 313 | 201 | 14 | 1 | 300 | 1 | 301 | 2.70e-16 | 80.1 |
| MS.gene68991.t1 | MTR_8g068340 | 24.731 | 372 | 235 | 11 | 2 | 348 | 8 | 359 | 4.90e-16 | 79.3 |
| MS.gene68991.t1 | MTR_3g008010 | 24.924 | 329 | 199 | 12 | 9 | 300 | 13 | 330 | 5.61e-16 | 79.3 |
| MS.gene68991.t1 | MTR_6g038200 | 26.786 | 336 | 178 | 15 | 2 | 300 | 4 | 308 | 1.06e-15 | 78.2 |
| MS.gene68991.t1 | MTR_6g014040 | 28.144 | 334 | 185 | 14 | 9 | 300 | 13 | 333 | 1.52e-15 | 77.8 |
| MS.gene68991.t1 | MTR_2g008225 | 26.531 | 343 | 202 | 13 | 7 | 321 | 16 | 336 | 2.02e-15 | 77.4 |
| MS.gene68991.t1 | MTR_8g059425 | 26.727 | 333 | 202 | 13 | 2 | 300 | 6 | 330 | 2.06e-15 | 77.4 |
| MS.gene68991.t1 | MTR_7g055710 | 25.429 | 350 | 214 | 12 | 3 | 321 | 8 | 341 | 2.13e-15 | 77.4 |
| MS.gene68991.t1 | MTR_4g008630 | 23.171 | 328 | 217 | 8 | 2 | 315 | 10 | 316 | 2.31e-15 | 77.4 |
| MS.gene68991.t1 | MTR_3g479470 | 25.526 | 333 | 195 | 11 | 7 | 300 | 14 | 332 | 2.64e-15 | 77.0 |
| MS.gene68991.t1 | MTR_4g123553 | 28.739 | 341 | 192 | 16 | 7 | 321 | 16 | 331 | 2.77e-15 | 77.0 |
| MS.gene68991.t1 | MTR_7g013200 | 25.159 | 314 | 186 | 11 | 9 | 300 | 8 | 294 | 3.17e-15 | 76.6 |
| MS.gene68991.t1 | MTR_1g019520 | 69.565 | 46 | 14 | 0 | 255 | 300 | 3 | 48 | 4.51e-15 | 73.9 |
| MS.gene68991.t1 | MTR_5g031860 | 26.994 | 326 | 192 | 14 | 7 | 300 | 13 | 324 | 5.40e-15 | 76.3 |
| MS.gene68991.t1 | MTR_6g042310 | 26.849 | 365 | 201 | 16 | 2 | 337 | 10 | 337 | 5.44e-15 | 76.3 |
| MS.gene68991.t1 | MTR_7g080935 | 25.291 | 344 | 166 | 14 | 3 | 300 | 8 | 306 | 5.80e-15 | 76.3 |
| MS.gene68991.t1 | MTR_5g040030 | 26.377 | 345 | 223 | 12 | 7 | 328 | 15 | 351 | 7.46e-15 | 75.9 |
| MS.gene68991.t1 | MTR_8g083290 | 25.610 | 328 | 189 | 10 | 7 | 300 | 5 | 311 | 7.91e-15 | 75.9 |
| MS.gene68991.t1 | MTR_7g013220 | 24.116 | 311 | 204 | 11 | 9 | 300 | 8 | 305 | 9.51e-15 | 75.5 |
| MS.gene68991.t1 | MTR_6g014250 | 24.925 | 333 | 196 | 13 | 8 | 300 | 12 | 330 | 1.01e-14 | 75.5 |
| MS.gene68991.t1 | MTR_5g035580 | 24.012 | 329 | 187 | 12 | 3 | 300 | 10 | 306 | 1.52e-14 | 74.7 |
| MS.gene68991.t1 | MTR_6g014020 | 26.807 | 332 | 193 | 12 | 8 | 300 | 12 | 332 | 1.78e-14 | 74.7 |
| MS.gene68991.t1 | MTR_2g008226 | 25.737 | 373 | 241 | 13 | 1 | 344 | 1 | 366 | 2.66e-14 | 73.9 |
| MS.gene68991.t1 | MTR_3g479520 | 25.439 | 342 | 196 | 13 | 1 | 300 | 10 | 334 | 2.78e-14 | 73.9 |
| MS.gene68991.t1 | MTR_4g095008 | 26.471 | 272 | 170 | 9 | 80 | 333 | 82 | 341 | 4.50e-14 | 73.6 |
| MS.gene68991.t1 | MTR_6g011340 | 25.723 | 311 | 179 | 11 | 31 | 300 | 33 | 332 | 6.61e-14 | 72.8 |
| MS.gene68991.t1 | MTR_6g014170 | 27.108 | 332 | 172 | 15 | 9 | 300 | 13 | 314 | 6.89e-14 | 72.8 |
| MS.gene68991.t1 | MTR_7g070660 | 24.332 | 337 | 210 | 10 | 3 | 315 | 8 | 323 | 7.24e-14 | 72.8 |
| MS.gene68991.t1 | MTR_3g079480 | 24.405 | 336 | 195 | 12 | 7 | 300 | 22 | 340 | 1.01e-13 | 72.4 |
| MS.gene68991.t1 | MTR_6g013960 | 27.035 | 344 | 189 | 19 | 2 | 300 | 6 | 332 | 1.06e-13 | 72.4 |
| MS.gene68991.t1 | MTR_0009s0240 | 26.970 | 330 | 205 | 15 | 3 | 312 | 4 | 317 | 1.33e-13 | 72.0 |
| MS.gene68991.t1 | MTR_5g087620 | 24.629 | 337 | 203 | 13 | 2 | 300 | 6 | 329 | 1.74e-13 | 71.6 |
| MS.gene68991.t1 | MTR_6g014187 | 26.608 | 342 | 193 | 17 | 2 | 300 | 6 | 332 | 1.98e-13 | 71.6 |
| MS.gene68991.t1 | MTR_7g070940 | 38.261 | 115 | 67 | 2 | 190 | 300 | 194 | 308 | 2.09e-13 | 71.2 |
| MS.gene68991.t1 | MTR_7g067120 | 25.237 | 317 | 181 | 11 | 3 | 300 | 6 | 285 | 2.70e-13 | 70.9 |
| MS.gene68991.t1 | MTR_7g067330 | 26.349 | 315 | 180 | 10 | 3 | 300 | 6 | 285 | 3.35e-13 | 70.5 |
| MS.gene68991.t1 | MTR_0288s0020 | 25.697 | 323 | 191 | 13 | 7 | 300 | 11 | 313 | 3.58e-13 | 70.5 |
| MS.gene68991.t1 | MTR_6g014186 | 25.225 | 333 | 195 | 15 | 9 | 300 | 10 | 329 | 3.78e-13 | 70.5 |
| MS.gene68991.t1 | MTR_7g013240 | 22.549 | 306 | 201 | 7 | 10 | 300 | 10 | 294 | 5.44e-13 | 70.1 |
| MS.gene68991.t1 | MTR_6g036650 | 25.588 | 340 | 211 | 12 | 7 | 321 | 19 | 341 | 6.25e-13 | 70.1 |
| MS.gene68991.t1 | MTR_4g485640 | 25.733 | 307 | 197 | 10 | 14 | 306 | 217 | 506 | 6.45e-13 | 70.1 |
| MS.gene68991.t1 | MTR_6g013450 | 26.946 | 334 | 191 | 15 | 8 | 300 | 12 | 333 | 6.78e-13 | 69.7 |
| MS.gene68991.t1 | MTR_4g485630 | 27.761 | 335 | 191 | 15 | 16 | 319 | 19 | 333 | 7.46e-13 | 69.7 |
| MS.gene68991.t1 | MTR_7g080940 | 24.405 | 336 | 183 | 14 | 1 | 300 | 6 | 306 | 7.90e-13 | 69.7 |
| MS.gene68991.t1 | MTR_6g052375 | 33.571 | 140 | 77 | 6 | 169 | 296 | 27 | 162 | 8.00e-13 | 68.9 |
| MS.gene68991.t1 | MTR_2g046620 | 26.113 | 337 | 206 | 12 | 7 | 321 | 17 | 332 | 1.17e-12 | 68.9 |
| MS.gene68991.t1 | MTR_4g031800 | 29.787 | 141 | 85 | 3 | 174 | 300 | 168 | 308 | 1.21e-12 | 68.9 |
| MS.gene68991.t1 | MTR_7g070870 | 35.938 | 128 | 71 | 4 | 192 | 315 | 207 | 327 | 1.22e-12 | 68.9 |
| MS.gene68991.t1 | MTR_6g038230 | 33.028 | 218 | 109 | 10 | 105 | 300 | 106 | 308 | 1.31e-12 | 68.9 |
| MS.gene68991.t1 | MTR_4g485620 | 26.506 | 249 | 149 | 5 | 95 | 321 | 83 | 319 | 1.46e-12 | 68.9 |
| MS.gene68991.t1 | MTR_4g485590 | 31.515 | 165 | 87 | 6 | 173 | 316 | 143 | 302 | 1.54e-12 | 68.6 |
| MS.gene68991.t1 | MTR_0536s0020 | 36.170 | 141 | 72 | 6 | 192 | 321 | 193 | 326 | 1.69e-12 | 68.6 |
| MS.gene68991.t1 | MTR_4g077960 | 28.613 | 346 | 207 | 17 | 15 | 338 | 1 | 328 | 2.34e-12 | 68.2 |
| MS.gene68991.t1 | MTR_6g014200 | 28.613 | 346 | 181 | 17 | 2 | 300 | 3 | 329 | 2.61e-12 | 68.2 |
| MS.gene68991.t1 | MTR_5g031840 | 25.148 | 338 | 212 | 14 | 7 | 312 | 6 | 334 | 3.05e-12 | 67.8 |
| MS.gene68991.t1 | MTR_7g102550 | 25.620 | 363 | 201 | 15 | 3 | 321 | 6 | 343 | 3.83e-12 | 67.4 |
| MS.gene68991.t1 | MTR_6g014050 | 31.325 | 166 | 96 | 7 | 149 | 300 | 172 | 333 | 4.33e-12 | 67.4 |
| MS.gene68991.t1 | MTR_8g071070 | 26.250 | 320 | 205 | 12 | 3 | 300 | 4 | 314 | 4.64e-12 | 67.4 |
| MS.gene68991.t1 | MTR_6g013440 | 26.061 | 330 | 196 | 12 | 9 | 300 | 14 | 333 | 4.87e-12 | 67.4 |
| MS.gene68991.t1 | MTR_4g117960 | 25.904 | 332 | 207 | 15 | 10 | 321 | 15 | 327 | 4.96e-12 | 67.4 |
| MS.gene68991.t1 | MTR_7g013260 | 38.043 | 92 | 49 | 2 | 212 | 300 | 209 | 295 | 5.04e-12 | 67.0 |
| MS.gene68991.t1 | MTR_6g013990 | 38.938 | 113 | 53 | 4 | 200 | 300 | 222 | 330 | 5.36e-12 | 67.0 |
| MS.gene68991.t1 | MTR_7g070610 | 26.331 | 338 | 189 | 16 | 11 | 315 | 20 | 330 | 5.47e-12 | 67.0 |
| MS.gene68991.t1 | MTR_7g102460 | 25.072 | 347 | 207 | 15 | 9 | 324 | 12 | 336 | 9.10e-12 | 66.6 |
| MS.gene68991.t1 | MTR_7g011470 | 32.639 | 144 | 82 | 6 | 170 | 300 | 177 | 318 | 1.10e-11 | 66.2 |
| MS.gene68991.t1 | MTR_8g066610 | 24.189 | 339 | 209 | 9 | 7 | 314 | 10 | 331 | 1.14e-11 | 66.2 |
| MS.gene68991.t1 | MTR_5g016480 | 28.421 | 190 | 103 | 8 | 171 | 334 | 166 | 348 | 1.14e-11 | 66.2 |
| MS.gene68991.t1 | MTR_8g064870 | 36.538 | 104 | 55 | 3 | 211 | 304 | 216 | 318 | 1.36e-11 | 65.9 |
| MS.gene68991.t1 | MTR_8g083280 | 33.051 | 118 | 73 | 2 | 211 | 324 | 221 | 336 | 1.60e-11 | 65.5 |
| MS.gene68991.t1 | MTR_7g011470 | 32.847 | 137 | 78 | 5 | 177 | 300 | 179 | 314 | 1.79e-11 | 65.5 |
| MS.gene68991.t1 | MTR_7g071040 | 25.070 | 359 | 217 | 15 | 3 | 328 | 14 | 353 | 2.23e-11 | 65.1 |
| MS.gene68991.t1 | MTR_6g014150 | 28.283 | 198 | 119 | 6 | 124 | 300 | 134 | 329 | 2.98e-11 | 64.7 |
| MS.gene68991.t1 | MTR_7g070930 | 24.159 | 327 | 205 | 11 | 3 | 300 | 11 | 323 | 4.55e-11 | 64.3 |
| MS.gene68991.t1 | MTR_4g094920 | 30.882 | 136 | 81 | 4 | 209 | 333 | 223 | 356 | 4.81e-11 | 64.3 |
| MS.gene68991.t1 | MTR_1g029540 | 22.254 | 346 | 216 | 12 | 2 | 328 | 10 | 321 | 5.20e-11 | 63.9 |
| MS.gene68991.t1 | MTR_6g014270 | 24.854 | 342 | 201 | 16 | 2 | 300 | 3 | 331 | 6.37e-11 | 63.9 |
| MS.gene68991.t1 | MTR_7g070780 | 25.157 | 318 | 194 | 12 | 11 | 300 | 18 | 319 | 7.22e-11 | 63.5 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene68991.t1 | AT4G01070 | 40.328 | 305 | 172 | 8 | 2 | 300 | 3 | 303 | 3.45e-64 | 207 |
| MS.gene68991.t1 | AT4G01070 | 40.328 | 305 | 172 | 8 | 2 | 300 | 3 | 303 | 3.11e-63 | 209 |
| MS.gene68991.t1 | AT1G01420 | 38.158 | 304 | 177 | 8 | 3 | 300 | 8 | 306 | 2.79e-61 | 204 |
| MS.gene68991.t1 | AT1G01420 | 38.158 | 304 | 177 | 8 | 3 | 300 | 5 | 303 | 2.99e-61 | 204 |
| MS.gene68991.t1 | AT1G01390 | 38.487 | 304 | 176 | 8 | 3 | 300 | 5 | 303 | 4.43e-60 | 201 |
| MS.gene68991.t1 | AT1G01390 | 38.487 | 304 | 176 | 8 | 3 | 300 | 22 | 320 | 5.65e-60 | 201 |
| MS.gene68991.t1 | AT5G26310 | 29.900 | 301 | 192 | 11 | 8 | 300 | 9 | 298 | 5.20e-35 | 134 |
| MS.gene68991.t1 | AT3G16520 | 32.013 | 303 | 194 | 8 | 7 | 300 | 6 | 305 | 5.86e-35 | 133 |
| MS.gene68991.t1 | AT3G16520 | 32.013 | 303 | 194 | 8 | 7 | 300 | 6 | 305 | 7.70e-35 | 132 |
| MS.gene68991.t1 | AT3G16520 | 32.013 | 303 | 194 | 8 | 7 | 300 | 6 | 305 | 8.42e-35 | 133 |
| MS.gene68991.t1 | AT3G21790 | 28.889 | 315 | 192 | 8 | 7 | 299 | 5 | 309 | 1.22e-33 | 130 |
| MS.gene68991.t1 | AT3G21780 | 29.487 | 312 | 191 | 8 | 4 | 299 | 2 | 300 | 1.83e-33 | 129 |
| MS.gene68991.t1 | AT2G18570 | 30.820 | 305 | 188 | 12 | 9 | 300 | 8 | 302 | 3.71e-33 | 128 |
| MS.gene68991.t1 | AT5G66690 | 30.915 | 317 | 168 | 14 | 8 | 300 | 9 | 298 | 4.71e-33 | 128 |
| MS.gene68991.t1 | AT3G50740 | 30.124 | 322 | 179 | 13 | 3 | 300 | 4 | 303 | 7.15e-33 | 128 |
| MS.gene68991.t1 | AT3G21800 | 29.167 | 312 | 199 | 7 | 3 | 299 | 2 | 306 | 2.13e-32 | 126 |
| MS.gene68991.t1 | AT4G36770 | 30.225 | 311 | 181 | 11 | 8 | 300 | 6 | 298 | 4.05e-32 | 125 |
| MS.gene68991.t1 | AT1G07250 | 27.692 | 325 | 200 | 10 | 1 | 299 | 1 | 316 | 5.54e-32 | 125 |
| MS.gene68991.t1 | AT1G07260 | 28.972 | 321 | 196 | 10 | 2 | 299 | 4 | 315 | 1.11e-31 | 124 |
| MS.gene68991.t1 | AT3G21750 | 27.213 | 305 | 205 | 8 | 4 | 299 | 2 | 298 | 9.31e-29 | 116 |
| MS.gene68991.t1 | AT2G29730 | 27.419 | 310 | 196 | 8 | 10 | 299 | 9 | 309 | 2.36e-28 | 115 |
| MS.gene68991.t1 | AT2G29710 | 27.358 | 318 | 202 | 9 | 1 | 299 | 1 | 308 | 7.81e-28 | 113 |
| MS.gene68991.t1 | AT2G29740 | 29.073 | 313 | 193 | 10 | 10 | 299 | 12 | 318 | 2.19e-27 | 112 |
| MS.gene68991.t1 | AT2G29750 | 29.412 | 323 | 185 | 13 | 7 | 299 | 9 | 318 | 3.17e-27 | 112 |
| MS.gene68991.t1 | AT4G15280 | 27.157 | 313 | 202 | 8 | 4 | 299 | 2 | 305 | 3.70e-26 | 108 |
| MS.gene68991.t1 | AT1G07240 | 26.154 | 325 | 210 | 9 | 10 | 313 | 9 | 324 | 4.56e-26 | 108 |
| MS.gene68991.t1 | AT4G15280 | 27.157 | 313 | 202 | 8 | 4 | 299 | 34 | 337 | 5.34e-26 | 108 |
| MS.gene68991.t1 | AT3G21760 | 27.160 | 324 | 195 | 9 | 4 | 299 | 2 | 312 | 1.04e-25 | 107 |
| MS.gene68991.t1 | AT4G15260 | 29.630 | 189 | 124 | 4 | 116 | 299 | 1 | 185 | 3.74e-23 | 99.4 |
| MS.gene68991.t1 | AT2G18560 | 30.806 | 211 | 134 | 6 | 96 | 300 | 8 | 212 | 2.27e-21 | 94.4 |
| MS.gene68991.t1 | AT4G34135 | 25.833 | 360 | 204 | 10 | 3 | 321 | 8 | 345 | 3.29e-19 | 89.0 |
| MS.gene68991.t1 | AT1G05675 | 27.457 | 346 | 215 | 13 | 1 | 326 | 1 | 330 | 4.34e-19 | 88.6 |
| MS.gene68991.t1 | AT1G22360 | 27.219 | 338 | 191 | 13 | 3 | 300 | 7 | 329 | 4.45e-19 | 88.6 |
| MS.gene68991.t1 | AT4G34135 | 25.740 | 338 | 188 | 10 | 4 | 300 | 9 | 324 | 4.96e-19 | 87.0 |
| MS.gene68991.t1 | AT1G22360 | 27.219 | 338 | 191 | 13 | 3 | 300 | 7 | 329 | 6.31e-19 | 88.2 |
| MS.gene68991.t1 | AT2G30140 | 25.962 | 312 | 206 | 9 | 7 | 307 | 14 | 311 | 3.39e-18 | 85.9 |
| MS.gene68991.t1 | AT2G30140 | 25.962 | 312 | 205 | 10 | 7 | 307 | 14 | 310 | 9.17e-18 | 84.3 |
| MS.gene68991.t1 | AT4G34131 | 24.189 | 339 | 194 | 9 | 3 | 300 | 7 | 323 | 3.16e-17 | 83.2 |
| MS.gene68991.t1 | AT3G55700 | 24.759 | 311 | 199 | 10 | 7 | 300 | 9 | 301 | 3.67e-17 | 82.8 |
| MS.gene68991.t1 | AT3G55710 | 24.924 | 329 | 211 | 10 | 7 | 316 | 9 | 320 | 9.64e-17 | 81.6 |
| MS.gene68991.t1 | AT2G36800 | 24.839 | 310 | 199 | 10 | 16 | 300 | 22 | 322 | 1.28e-16 | 81.3 |
| MS.gene68991.t1 | AT2G36780 | 25.472 | 318 | 200 | 12 | 9 | 300 | 17 | 323 | 5.19e-16 | 79.3 |
| MS.gene68991.t1 | AT2G15480 | 27.193 | 228 | 136 | 6 | 91 | 300 | 108 | 323 | 5.61e-16 | 79.3 |
| MS.gene68991.t1 | AT2G15480 | 27.193 | 228 | 136 | 6 | 91 | 300 | 108 | 323 | 6.18e-16 | 79.3 |
| MS.gene68991.t1 | AT1G05680 | 25.938 | 320 | 202 | 12 | 1 | 300 | 1 | 305 | 9.19e-16 | 78.6 |
| MS.gene68991.t1 | AT2G36770 | 25.407 | 307 | 200 | 11 | 16 | 300 | 24 | 323 | 1.03e-15 | 78.6 |
| MS.gene68991.t1 | AT2G15490 | 25.887 | 282 | 172 | 8 | 74 | 333 | 86 | 352 | 1.84e-15 | 77.8 |
| MS.gene68991.t1 | AT1G22380 | 24.926 | 337 | 202 | 15 | 2 | 300 | 9 | 332 | 2.19e-15 | 77.4 |
| MS.gene68991.t1 | AT1G22340 | 24.925 | 333 | 197 | 13 | 7 | 300 | 14 | 332 | 2.58e-15 | 77.4 |
| MS.gene68991.t1 | AT3G46650 | 23.175 | 315 | 203 | 9 | 1 | 306 | 5 | 289 | 3.52e-15 | 76.6 |
| MS.gene68991.t1 | AT1G22370 | 24.925 | 333 | 200 | 14 | 3 | 300 | 10 | 327 | 3.52e-15 | 77.0 |
| MS.gene68991.t1 | AT3G02100 | 22.324 | 327 | 202 | 11 | 7 | 300 | 14 | 321 | 4.24e-15 | 76.6 |
| MS.gene68991.t1 | AT3G46670 | 28.803 | 309 | 186 | 13 | 7 | 300 | 10 | 299 | 4.44e-15 | 76.6 |
| MS.gene68991.t1 | AT2G15490 | 26.908 | 249 | 146 | 7 | 74 | 300 | 86 | 320 | 6.24e-15 | 76.3 |
| MS.gene68991.t1 | AT1G10400 | 25.000 | 372 | 229 | 15 | 4 | 344 | 5 | 357 | 9.04e-15 | 75.5 |
| MS.gene68991.t1 | AT2G16890 | 26.829 | 328 | 208 | 13 | 7 | 312 | 10 | 327 | 1.40e-14 | 74.7 |
| MS.gene68991.t1 | AT2G16890 | 26.829 | 328 | 208 | 13 | 7 | 312 | 10 | 327 | 1.60e-14 | 74.7 |
| MS.gene68991.t1 | AT2G36760 | 24.765 | 319 | 201 | 12 | 9 | 300 | 17 | 323 | 1.89e-14 | 74.7 |
| MS.gene68991.t1 | AT5G38010 | 26.480 | 321 | 193 | 12 | 2 | 300 | 6 | 305 | 2.14e-14 | 74.3 |
| MS.gene68991.t1 | AT1G22400 | 25.904 | 332 | 196 | 16 | 7 | 300 | 14 | 333 | 2.54e-14 | 74.3 |
| MS.gene68991.t1 | AT5G59590 | 24.839 | 310 | 205 | 10 | 3 | 300 | 7 | 300 | 5.00e-14 | 73.2 |
| MS.gene68991.t1 | AT3G46690 | 24.204 | 314 | 203 | 10 | 3 | 300 | 6 | 300 | 7.60e-14 | 72.8 |
| MS.gene68991.t1 | AT5G14860 | 25.843 | 356 | 229 | 13 | 17 | 344 | 19 | 367 | 8.90e-14 | 72.8 |
| MS.gene68991.t1 | AT2G36750 | 25.000 | 308 | 199 | 11 | 16 | 300 | 20 | 318 | 2.00e-13 | 71.6 |
| MS.gene68991.t1 | AT1G78270 | 25.872 | 344 | 201 | 16 | 10 | 316 | 17 | 343 | 2.22e-13 | 71.2 |
| MS.gene68991.t1 | AT2G31750 | 33.913 | 115 | 60 | 3 | 209 | 309 | 202 | 314 | 5.59e-13 | 70.1 |
| MS.gene68991.t1 | AT2G31750 | 33.913 | 115 | 60 | 3 | 209 | 309 | 202 | 314 | 6.03e-13 | 70.1 |
| MS.gene68991.t1 | AT4G15550 | 29.612 | 206 | 130 | 6 | 109 | 307 | 123 | 320 | 9.13e-13 | 69.3 |
| MS.gene68991.t1 | AT5G03490 | 24.611 | 321 | 192 | 12 | 7 | 300 | 20 | 317 | 9.13e-13 | 69.3 |
| MS.gene68991.t1 | AT5G37950 | 29.327 | 208 | 124 | 8 | 103 | 300 | 77 | 271 | 9.89e-13 | 68.9 |
| MS.gene68991.t1 | AT5G38040 | 25.338 | 296 | 196 | 12 | 16 | 300 | 20 | 301 | 1.61e-12 | 68.6 |
| MS.gene68991.t1 | AT5G12890 | 26.814 | 317 | 200 | 13 | 7 | 300 | 11 | 318 | 1.81e-12 | 68.6 |
| MS.gene68991.t1 | AT3G46680 | 25.000 | 316 | 202 | 10 | 1 | 300 | 4 | 300 | 5.41e-12 | 67.0 |
| MS.gene68991.t1 | AT5G59580 | 23.779 | 307 | 209 | 9 | 4 | 300 | 7 | 298 | 5.71e-12 | 67.0 |
| MS.gene68991.t1 | AT2G23250 | 27.411 | 197 | 122 | 7 | 161 | 348 | 141 | 325 | 7.31e-12 | 66.6 |
| MS.gene68991.t1 | AT2G36970 | 23.270 | 318 | 212 | 11 | 7 | 300 | 11 | 320 | 8.01e-12 | 66.6 |
| MS.gene68991.t1 | AT5G37950 | 27.907 | 215 | 124 | 8 | 103 | 300 | 77 | 277 | 8.10e-12 | 66.2 |
| MS.gene68991.t1 | AT1G22370 | 34.286 | 105 | 54 | 3 | 210 | 300 | 54 | 157 | 8.22e-12 | 65.9 |
| MS.gene68991.t1 | AT2G22590 | 24.923 | 325 | 197 | 16 | 3 | 300 | 12 | 316 | 9.27e-12 | 66.2 |
| MS.gene68991.t1 | AT2G31790 | 28.182 | 220 | 108 | 9 | 111 | 299 | 106 | 306 | 9.81e-12 | 66.2 |
| MS.gene68991.t1 | AT1G51210 | 27.619 | 315 | 191 | 13 | 4 | 300 | 18 | 313 | 5.19e-11 | 63.9 |
| MS.gene68991.t1 | AT2G28080 | 27.568 | 185 | 123 | 6 | 124 | 300 | 142 | 323 | 6.76e-11 | 63.9 |
| MS.gene68991.t1 | AT4G34138 | 24.506 | 253 | 144 | 8 | 68 | 300 | 98 | 323 | 6.76e-11 | 63.9 |
| MS.gene68991.t1 | AT3G53160 | 23.659 | 317 | 207 | 13 | 9 | 300 | 11 | 317 | 7.42e-11 | 63.5 |
Find 60 sgRNAs with CRISPR-Local
Find 107 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| CAAACATGTCAGTGTGTTTA+AGG | 0.207390 | 6.2:-87108199 | MS.gene68991:CDS |
| ATGAGTTTCATTTGTGTTGC+AGG | 0.264646 | 6.2:+87108707 | None:intergenic |
| CAACTCAATGAGTTAGCTTT+TGG | 0.267584 | 6.2:-87108104 | MS.gene68991:CDS |
| CATTATTCTCTTTAAAGCTT+TGG | 0.330448 | 6.2:+87107698 | None:intergenic |
| TATGAAACGGTAAATGTTCC+TGG | 0.334694 | 6.2:-87108455 | MS.gene68991:CDS |
| TTTACTTCATCATGAAGAAA+TGG | 0.375355 | 6.2:+87108668 | None:intergenic |
| CACATCAAGAATTGATTTGT+AGG | 0.382627 | 6.2:+87108367 | None:intergenic |
| TTTGACTCATTTCTAATGAT+AGG | 0.384201 | 6.2:+87108230 | None:intergenic |
| AATCAATACTTTCAGTAACT+TGG | 0.394076 | 6.2:-87108312 | MS.gene68991:CDS |
| CTTGATCTTTCACAGTTAAA+CGG | 0.397927 | 6.2:+87108395 | None:intergenic |
| TTCCATGTCAAAGAGCTTCC+CGG | 0.406355 | 6.2:-87108419 | MS.gene68991:CDS |
| TCTGTCTTGAAGTACCCTTA+TGG | 0.408342 | 6.2:+87108280 | None:intergenic |
| CAAAGCTTTAAAGAGAATAA+TGG | 0.417887 | 6.2:-87107697 | MS.gene68991:CDS |
| TTGATCTTTCACAGTTAAAC+GGG | 0.428058 | 6.2:+87108396 | None:intergenic |
| CAAGCAGCTTCATCAAGGTT+TGG | 0.430065 | 6.2:+87108500 | None:intergenic |
| TAAGTGAGCATGGTTCTTCT+AGG | 0.434640 | 6.2:-87107608 | MS.gene68991:CDS |
| TGGGAATGAGGAATGTGATA+TGG | 0.445807 | 6.2:+87108843 | None:intergenic |
| AAAAGAAAAGGTAAGACAAA+AGG | 0.448905 | 6.2:+87108561 | None:intergenic |
| ACTTGGAAACGGAAGCCATA+AGG | 0.463415 | 6.2:-87108295 | MS.gene68991:CDS |
| AGAACAGTGAAGTTCATGTT+TGG | 0.465285 | 6.2:+87108770 | None:intergenic |
| GTCAGTGTGTTTAAGGTGGT+TGG | 0.475652 | 6.2:-87108192 | MS.gene68991:CDS |
| GATTGCATGGAAGGAGTTAG+TGG | 0.480920 | 6.2:+87108812 | None:intergenic |
| TTCAAGATGGATTGCATGGA+AGG | 0.487127 | 6.2:+87108803 | None:intergenic |
| TACTTTCAGTAACTTGGAAA+CGG | 0.497232 | 6.2:-87108306 | MS.gene68991:CDS |
| CTTTCACAGTTAAACGGGCC+GGG | 0.497981 | 6.2:+87108401 | None:intergenic |
| CTTAGAGTCAAGTTATGAAA+CGG | 0.499600 | 6.2:-87108468 | MS.gene68991:CDS |
| ACAGTGAAGTTCATGTTTGG+TGG | 0.503055 | 6.2:+87108773 | None:intergenic |
| ACTCAACTTGTGGAATCAAA+TGG | 0.508563 | 6.2:+87108900 | None:intergenic |
| AAGGTCTTCAATGTTGACTT+GGG | 0.511276 | 6.2:+87108745 | None:intergenic |
| CAGCTCCTGAAGAAAAGAAA+AGG | 0.514556 | 6.2:+87108549 | None:intergenic |
| TTTCTAATGATAGGTCCAAC+CGG | 0.515572 | 6.2:+87108239 | None:intergenic |
| ATTGCTATGGTTCCTTCACC+TGG | 0.517578 | 6.2:-87108929 | MS.gene68991:CDS |
| TATGGTACTCGTTGTGATGT+TGG | 0.520534 | 6.2:+87108861 | None:intergenic |
| ACATTCCTCATTCCCACACT+TGG | 0.525207 | 6.2:-87108836 | MS.gene68991:CDS |
| GTGGACCAAGTGTGGGAATG+AGG | 0.530898 | 6.2:+87108831 | None:intergenic |
| GAGTGGTCACAAATTCTTGT+GGG | 0.531702 | 6.2:-87108072 | MS.gene68991:CDS |
| CTTGGAAACGGAAGCCATAA+GGG | 0.537236 | 6.2:-87108294 | MS.gene68991:CDS |
| AGGAGTTAGTGGACCAAGTG+TGG | 0.541159 | 6.2:+87108823 | None:intergenic |
| GAGTACAAGCAGCTTCATCA+AGG | 0.541797 | 6.2:+87108495 | None:intergenic |
| GAAGGTCTTCAATGTTGACT+TGG | 0.545743 | 6.2:+87108744 | None:intergenic |
| GGAAGCTCTTTGACATGGAA+AGG | 0.546640 | 6.2:+87108422 | None:intergenic |
| AGTGTTCAAGATGGATTGCA+TGG | 0.550670 | 6.2:+87108799 | None:intergenic |
| GGAATCAAATGGCTCAGTCC+AGG | 0.554575 | 6.2:+87108911 | None:intergenic |
| CAGGTTCAAGATTATGTGGA+AGG | 0.557674 | 6.2:+87108726 | None:intergenic |
| GTTGCAGGTTCAAGATTATG+TGG | 0.558142 | 6.2:+87108722 | None:intergenic |
| TCTTTCACAGTTAAACGGGC+CGG | 0.558439 | 6.2:+87108400 | None:intergenic |
| TTTAGCAACATCGTGTGCAT+CGG | 0.569814 | 6.2:+87108592 | None:intergenic |
| GAACAAGACATGCATTGCTA+TGG | 0.581310 | 6.2:-87108942 | MS.gene68991:CDS |
| TGGTGGAAGAGTGTTCAAGA+TGG | 0.583956 | 6.2:+87108790 | None:intergenic |
| AAAATCATAGAATTGAGTGT+TGG | 0.591070 | 6.2:-87107645 | MS.gene68991:CDS |
| AAATGGCTCAGTCCAGGTGA+AGG | 0.593894 | 6.2:+87108917 | None:intergenic |
| TGAGTGGTCACAAATTCTTG+TGG | 0.600819 | 6.2:-87108073 | MS.gene68991:CDS |
| TCTCTACTCTAGCATTGAAG+TGG | 0.606601 | 6.2:-87107578 | MS.gene68991:CDS |
| GGCCGGGAAGCTCTTTGACA+TGG | 0.608641 | 6.2:+87108417 | None:intergenic |
| GGAGTTAGTGGACCAAGTGT+GGG | 0.621400 | 6.2:+87108824 | None:intergenic |
| GCTACTGTACTAAGTGAGCA+TGG | 0.632519 | 6.2:-87107618 | MS.gene68991:CDS |
| AGGTCTTCAATGTTGACTTG+GGG | 0.654290 | 6.2:+87108746 | None:intergenic |
| GCTTTAAAGAGAATAATGGA+AGG | 0.680069 | 6.2:-87107693 | MS.gene68991:CDS |
| ACATGTCAGTGTGTTTAAGG+TGG | 0.684159 | 6.2:-87108196 | MS.gene68991:CDS |
| TGCTGCAGACTAAAGCAACA+AGG | 0.709727 | 6.2:+87108624 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTAGAAAGAACAAAAGATAA+GGG | - | chr6.2:87108556-87108575 | MS.gene68991:CDS | 20.0% |
| !! | TTTAGAAAGAACAAAAGATA+AGG | - | chr6.2:87108555-87108574 | MS.gene68991:CDS | 20.0% |
| ! | AAAAGAAAAGGTAAGACAAA+AGG | + | chr6.2:87107961-87107980 | None:intergenic | 25.0% |
| ! | AAAATCATAGAATTGAGTGT+TGG | - | chr6.2:87108874-87108893 | MS.gene68991:CDS | 25.0% |
| ! | AATCAATACTTTCAGTAACT+TGG | - | chr6.2:87108207-87108226 | MS.gene68991:CDS | 25.0% |
| ! | CAAAAATCATCATTGTTTGA+TGG | - | chr6.2:87108178-87108197 | MS.gene68991:CDS | 25.0% |
| ! | TTTACTTCATCATGAAGAAA+TGG | + | chr6.2:87107854-87107873 | None:intergenic | 25.0% |
| ! | TTTGACTCATTTCTAATGAT+AGG | + | chr6.2:87108292-87108311 | None:intergenic | 25.0% |
| !! | GTTCTTTCTAAAAAACCATT+TGG | + | chr6.2:87108547-87108566 | None:intergenic | 25.0% |
| !!! | CAAAGCTTTAAAGAGAATAA+TGG | - | chr6.2:87108822-87108841 | MS.gene68991:CDS | 25.0% |
| !!! | CATTATTCTCTTTAAAGCTT+TGG | + | chr6.2:87108824-87108843 | None:intergenic | 25.0% |
| !!! | TCTGTTGTTTTTGTATCTTT+TGG | - | chr6.2:87108367-87108386 | MS.gene68991:CDS | 25.0% |
| AACAAAAGATAAGGGATTAG+TGG | - | chr6.2:87108564-87108583 | MS.gene68991:CDS | 30.0% | |
| CTTAGAGTCAAGTTATGAAA+CGG | - | chr6.2:87108051-87108070 | MS.gene68991:intron | 30.0% | |
| CTTGATCTTTCACAGTTAAA+CGG | + | chr6.2:87108127-87108146 | None:intergenic | 30.0% | |
| GATACAAAAACAACAGAACT+TGG | + | chr6.2:87108364-87108383 | None:intergenic | 30.0% | |
| TACTTTCAGTAACTTGGAAA+CGG | - | chr6.2:87108213-87108232 | MS.gene68991:CDS | 30.0% | |
| TTGATCTTTCACAGTTAAAC+GGG | + | chr6.2:87108126-87108145 | None:intergenic | 30.0% | |
| ! | AGAGAAACCTAGTATTTTTC+CGG | - | chr6.2:87108261-87108280 | MS.gene68991:CDS | 30.0% |
| ! | TCTTACCTTTTCTTTTCTTC+AGG | - | chr6.2:87107965-87107984 | MS.gene68991:intron | 30.0% |
| !! | CACATCAAGAATTGATTTGT+AGG | + | chr6.2:87108155-87108174 | None:intergenic | 30.0% |
| !! | GCTTTAAAGAGAATAATGGA+AGG | - | chr6.2:87108826-87108845 | MS.gene68991:CDS | 30.0% |
| !! | GTTTTTGTATCTTTTGGAAG+TGG | - | chr6.2:87108373-87108392 | MS.gene68991:CDS | 30.0% |
| !!! | CAACAAGGTTAGTTTTTGAA+AGG | + | chr6.2:87107883-87107902 | None:intergenic | 30.0% |
| !!! | GTTTTTTAAGTCATTGTGGT+TGG | - | chr6.2:87108638-87108657 | MS.gene68991:CDS | 30.0% |
| AACAATGGCCATGTAATCAA+CGG | + | chr6.2:87108697-87108716 | None:intergenic | 35.0% | |
| ACAAAAACAACAGAACTTGG+TGG | + | chr6.2:87108361-87108380 | None:intergenic | 35.0% | |
| ACTCAACTTGTGGAATCAAA+TGG | + | chr6.2:87107622-87107641 | None:intergenic | 35.0% | |
| AGAACAGTGAAGTTCATGTT+TGG | + | chr6.2:87107752-87107771 | None:intergenic | 35.0% | |
| ATGAGTTTCATTTGTGTTGC+AGG | + | chr6.2:87107815-87107834 | None:intergenic | 35.0% | |
| ATTCTTGGTCATGGATCAAT+TGG | - | chr6.2:87108613-87108632 | MS.gene68991:CDS | 35.0% | |
| CAAACATGTCAGTGTGTTTA+AGG | - | chr6.2:87108320-87108339 | MS.gene68991:CDS | 35.0% | |
| CCATTTGGTAAATACTCCAA+TGG | + | chr6.2:87108532-87108551 | None:intergenic | 35.0% | |
| GCAGAACTAGAATGTTTACT+TGG | + | chr6.2:87108484-87108503 | None:intergenic | 35.0% | |
| TATGAAACGGTAAATGTTCC+TGG | - | chr6.2:87108064-87108083 | MS.gene68991:intron | 35.0% | |
| TGGAAAGGAATAGAAAAACC+AGG | + | chr6.2:87108085-87108104 | None:intergenic | 35.0% | |
| TGGACAAAACGATAATCCAT+TGG | - | chr6.2:87108513-87108532 | MS.gene68991:CDS | 35.0% | |
| TTTCTAATGATAGGTCCAAC+CGG | + | chr6.2:87108283-87108302 | None:intergenic | 35.0% | |
| ! | AAACCTAGTATTTTTCCGGT+TGG | - | chr6.2:87108265-87108284 | MS.gene68991:CDS | 35.0% |
| ! | AGTTTTGCAAACTCAACTTG+TGG | + | chr6.2:87107632-87107651 | None:intergenic | 35.0% |
| ! | CCATTGGAGTATTTACCAAA+TGG | - | chr6.2:87108529-87108548 | MS.gene68991:CDS | 35.0% |
| !! | AAGGTCTTCAATGTTGACTT+GGG | + | chr6.2:87107777-87107796 | None:intergenic | 35.0% |
| !! | TCTAGTTCTGCTTACTTTAG+TGG | - | chr6.2:87108493-87108512 | MS.gene68991:CDS | 35.0% |
| !! | TTCCTCTCGTTTTATTATCC+CGG | + | chr6.2:87108797-87108816 | None:intergenic | 35.0% |
| !! | TTTGTATCTTTTGGAAGTGG+TGG | - | chr6.2:87108376-87108395 | MS.gene68991:CDS | 35.0% |
| !!! | CAACTCAATGAGTTAGCTTT+TGG | - | chr6.2:87108415-87108434 | MS.gene68991:CDS | 35.0% |
| !!! | GCTTTTGGTTTAGAATTGAG+TGG | - | chr6.2:87108430-87108449 | MS.gene68991:CDS | 35.0% |
| !!! | GGTGGTTTTTTAAGTCATTG+TGG | - | chr6.2:87108634-87108653 | MS.gene68991:CDS | 35.0% |
| AACCGGGATAATAAAACGAG+AGG | - | chr6.2:87108792-87108811 | MS.gene68991:CDS | 40.0% | |
| ACAGTGAAGTTCATGTTTGG+TGG | + | chr6.2:87107749-87107768 | None:intergenic | 40.0% | |
| ACATGTCAGTGTGTTTAAGG+TGG | - | chr6.2:87108323-87108342 | MS.gene68991:CDS | 40.0% | |
| ATCCTTTGCTCTGCAAACAA+TGG | + | chr6.2:87108712-87108731 | None:intergenic | 40.0% | |
| CAGCTCCTGAAGAAAAGAAA+AGG | + | chr6.2:87107973-87107992 | None:intergenic | 40.0% | |
| CAGGTTCAAGATTATGTGGA+AGG | + | chr6.2:87107796-87107815 | None:intergenic | 40.0% | |
| GAACAAGACATGCATTGCTA+TGG | - | chr6.2:87107577-87107596 | MS.gene68991:CDS | 40.0% | |
| GAGTGGTCACAAATTCTTGT+GGG | - | chr6.2:87108447-87108466 | MS.gene68991:CDS | 40.0% | |
| GTTGCAGGTTCAAGATTATG+TGG | + | chr6.2:87107800-87107819 | None:intergenic | 40.0% | |
| TAAGTGAGCATGGTTCTTCT+AGG | - | chr6.2:87108911-87108930 | MS.gene68991:CDS | 40.0% | |
| TATGGTACTCGTTGTGATGT+TGG | + | chr6.2:87107661-87107680 | None:intergenic | 40.0% | |
| TGACCAAGAATCTCAACTTG+CGG | + | chr6.2:87108604-87108623 | None:intergenic | 40.0% | |
| TGAGTGGTCACAAATTCTTG+TGG | - | chr6.2:87108446-87108465 | MS.gene68991:CDS | 40.0% | |
| TGGGAATGAGGAATGTGATA+TGG | + | chr6.2:87107679-87107698 | None:intergenic | 40.0% | |
| TTGTGGTTGGAGTTCAACTT+TGG | - | chr6.2:87108651-87108670 | MS.gene68991:CDS | 40.0% | |
| TTTAGCAACATCGTGTGCAT+CGG | + | chr6.2:87107930-87107949 | None:intergenic | 40.0% | |
| ! | ACTTTGGAGAGTGTGGTTAA+CGG | - | chr6.2:87108667-87108686 | MS.gene68991:CDS | 40.0% |
| ! | AGGGATTAGTGGTTACATCA+TGG | - | chr6.2:87108575-87108594 | MS.gene68991:CDS | 40.0% |
| ! | CAAGTTGAGATTCTTGGTCA+TGG | - | chr6.2:87108604-87108623 | MS.gene68991:CDS | 40.0% |
| ! | GAAGGTCTTCAATGTTGACT+TGG | + | chr6.2:87107778-87107797 | None:intergenic | 40.0% |
| ! | GGGATTAGTGGTTACATCAT+GGG | - | chr6.2:87108576-87108595 | MS.gene68991:CDS | 40.0% |
| ! | TCTCTACTCTAGCATTGAAG+TGG | - | chr6.2:87108941-87108960 | MS.gene68991:CDS | 40.0% |
| ! | TCTGTCTTGAAGTACCCTTA+TGG | + | chr6.2:87108242-87108261 | None:intergenic | 40.0% |
| !! | AGGTCTTCAATGTTGACTTG+GGG | + | chr6.2:87107776-87107795 | None:intergenic | 40.0% |
| !! | AGTGTTCAAGATGGATTGCA+TGG | + | chr6.2:87107723-87107742 | None:intergenic | 40.0% |
| !! | CAAAGGTTGATGATGAAACC+GGG | - | chr6.2:87108776-87108795 | MS.gene68991:CDS | 40.0% |
| !! | CCAAAGGTTGATGATGAAAC+CGG | - | chr6.2:87108775-87108794 | MS.gene68991:CDS | 40.0% |
| !! | TTCAAGATGGATTGCATGGA+AGG | + | chr6.2:87107719-87107738 | None:intergenic | 40.0% |
| ACATTCCTCATTCCCACACT+TGG | - | chr6.2:87107683-87107702 | MS.gene68991:CDS | 45.0% | |
| ACTCACTGATGTGCTCAAAG+TGG | - | chr6.2:87108744-87108763 | MS.gene68991:CDS | 45.0% | |
| ACTTGGAAACGGAAGCCATA+AGG | - | chr6.2:87108224-87108243 | MS.gene68991:CDS | 45.0% | |
| ATGTGCTCAAAGTGGCAGTA+AGG | - | chr6.2:87108752-87108771 | MS.gene68991:CDS | 45.0% | |
| ATTGCTATGGTTCCTTCACC+TGG | - | chr6.2:87107590-87107609 | MS.gene68991:CDS | 45.0% | |
| CAAGCAGCTTCATCAAGGTT+TGG | + | chr6.2:87108022-87108041 | None:intergenic | 45.0% | |
| CCGGTTTCATCATCAACCTT+TGG | + | chr6.2:87108778-87108797 | None:intergenic | 45.0% | |
| CTTGGAAACGGAAGCCATAA+GGG | - | chr6.2:87108225-87108244 | MS.gene68991:CDS | 45.0% | |
| CTTGGTCATGGATCAATTGG+TGG | - | chr6.2:87108616-87108635 | MS.gene68991:CDS | 45.0% | |
| GAGTACAAGCAGCTTCATCA+AGG | + | chr6.2:87108027-87108046 | None:intergenic | 45.0% | |
| GATTGCATGGAAGGAGTTAG+TGG | + | chr6.2:87107710-87107729 | None:intergenic | 45.0% | |
| GCTACTGTACTAAGTGAGCA+TGG | - | chr6.2:87108901-87108920 | MS.gene68991:CDS | 45.0% | |
| GGAAGCTCTTTGACATGGAA+AGG | + | chr6.2:87108100-87108119 | None:intergenic | 45.0% | |
| GGTCCAACCGGAAAAATACT+AGG | + | chr6.2:87108271-87108290 | None:intergenic | 45.0% | |
| TCTTTCACAGTTAAACGGGC+CGG | + | chr6.2:87108122-87108141 | None:intergenic | 45.0% | |
| TGCTGCAGACTAAAGCAACA+AGG | + | chr6.2:87107898-87107917 | None:intergenic | 45.0% | |
| TTCCATGTCAAAGAGCTTCC+CGG | - | chr6.2:87108100-87108119 | MS.gene68991:CDS | 45.0% | |
| ! | GAGTTCAACTTTGGAGAGTG+TGG | - | chr6.2:87108660-87108679 | MS.gene68991:CDS | 45.0% |
| ! | GTCAGTGTGTTTAAGGTGGT+TGG | - | chr6.2:87108327-87108346 | MS.gene68991:CDS | 45.0% |
| !! | TGGTGGAAGAGTGTTCAAGA+TGG | + | chr6.2:87107732-87107751 | None:intergenic | 45.0% |
| AAATGGCTCAGTCCAGGTGA+AGG | + | chr6.2:87107605-87107624 | None:intergenic | 50.0% | |
| CAAAGTGGCAGTAAGGCCAA+AGG | - | chr6.2:87108759-87108778 | MS.gene68991:CDS | 50.0% | |
| CTTTCACAGTTAAACGGGCC+GGG | + | chr6.2:87108121-87108140 | None:intergenic | 50.0% | |
| GGAATCAAATGGCTCAGTCC+AGG | + | chr6.2:87107611-87107630 | None:intergenic | 50.0% | |
| GGCCATTGTTTGCAGAGCAA+AGG | - | chr6.2:87108707-87108726 | MS.gene68991:CDS | 50.0% | |
| ! | AGGAGTTAGTGGACCAAGTG+TGG | + | chr6.2:87107699-87107718 | None:intergenic | 50.0% |
| ! | GCACCGCAAGTTGAGATTCT+TGG | - | chr6.2:87108598-87108617 | MS.gene68991:CDS | 50.0% |
| ! | GGAGTTAGTGGACCAAGTGT+GGG | + | chr6.2:87107698-87107717 | None:intergenic | 50.0% |
| GTGGACCAAGTGTGGGAATG+AGG | + | chr6.2:87107691-87107710 | None:intergenic | 55.0% | |
| ! | ACGGCGTGCCGTTGATTACA+TGG | - | chr6.2:87108686-87108705 | MS.gene68991:CDS | 55.0% |
| GGCCGGGAAGCTCTTTGACA+TGG | + | chr6.2:87108105-87108124 | None:intergenic | 60.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr6.2 | gene | 87107572 | 87108969 | 87107572 | ID=MS.gene68991 |
| chr6.2 | mRNA | 87107572 | 87108969 | 87107572 | ID=MS.gene68991.t1;Parent=MS.gene68991 |
| chr6.2 | exon | 87108070 | 87108969 | 87108070 | ID=MS.gene68991.t1.exon1;Parent=MS.gene68991.t1 |
| chr6.2 | CDS | 87108070 | 87108969 | 87108070 | ID=cds.MS.gene68991.t1;Parent=MS.gene68991.t1 |
| chr6.2 | exon | 87107572 | 87107727 | 87107572 | ID=MS.gene68991.t1.exon2;Parent=MS.gene68991.t1 |
| chr6.2 | CDS | 87107572 | 87107727 | 87107572 | ID=cds.MS.gene68991.t1;Parent=MS.gene68991.t1 |
| Gene Sequence |
| Protein sequence |
