Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69107.t1 | RHN70961.1 | 95.7 | 489 | 20 | 1 | 1 | 489 | 1 | 488 | 9.40E-266 | 925.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69107.t1 | Q5SWX8 | 25.7 | 482 | 277 | 18 | 30 | 486 | 28 | 453 | 1.4e-20 | 102.4 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69107.t1 | A0A396J263 | 95.7 | 489 | 20 | 1 | 1 | 489 | 1 | 488 | 6.8e-266 | 925.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049419 | MS.gene69107 | 0.845038 | 5.21E-59 | -1.69E-46 |
| MS.gene052965 | MS.gene69107 | 0.829114 | 6.17E-55 | -1.69E-46 |
| MS.gene054479 | MS.gene69107 | -0.805015 | 1.64E-49 | -1.69E-46 |
| MS.gene055701 | MS.gene69107 | -0.81124 | 7.73E-51 | -1.69E-46 |
| MS.gene057156 | MS.gene69107 | 0.827203 | 1.78E-54 | -1.69E-46 |
| MS.gene058223 | MS.gene69107 | 0.805522 | 1.28E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69107.t1 | MTR_3g111330 | 93.214 | 501 | 21 | 2 | 1 | 489 | 1 | 500 | 0.0 | 922 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69107.t1 | AT3G28670 | 51.324 | 491 | 230 | 7 | 1 | 485 | 1 | 488 | 4.45e-166 | 478 |
| MS.gene69107.t1 | AT3G28670 | 51.324 | 491 | 230 | 7 | 1 | 485 | 1 | 488 | 4.45e-166 | 478 |
| MS.gene69107.t1 | AT3G28670 | 51.324 | 491 | 230 | 7 | 1 | 485 | 52 | 539 | 2.76e-165 | 478 |
Find 116 sgRNAs with CRISPR-Local
Find 350 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| AACTGATATCTCTACAATTT+TGG | 0.135918 | 3.4:-96281147 | MS.gene69107:CDS |
| CGCCGGCTTCGGAGGTTAAC+TGG | 0.184746 | 3.4:-96285960 | MS.gene69107:CDS |
| CTCTCTTCATCGACAATGAT+TGG | 0.265093 | 3.4:-96286410 | MS.gene69107:CDS |
| GGATGAACCATCATGCAATA+TGG | 0.270961 | 3.4:+96285559 | None:intergenic |
| AGCCCTGATCGACGGTAAAT+TGG | 0.287820 | 3.4:-96285465 | MS.gene69107:intron |
| GTATGCACAACTTTAATCTT+AGG | 0.297210 | 3.4:-96285682 | MS.gene69107:intron |
| TCAGTGACAACTTGTGAAAT+TGG | 0.314503 | 3.4:+96282820 | None:intergenic |
| ACAAGTTGTCACTGATATAA+AGG | 0.321637 | 3.4:-96282812 | MS.gene69107:intron |
| CTACTTCTGCAAATTTGTTA+TGG | 0.324976 | 3.4:-96285928 | MS.gene69107:CDS |
| GATATCAGTTGGAGCTTTCA+TGG | 0.325150 | 3.4:+96281160 | None:intergenic |
| ATCGGGTTGAGTTTGAGATT+TGG | 0.327844 | 3.4:+96286440 | None:intergenic |
| GTTTCATCTTGTCTTCTTTG+AGG | 0.329321 | 3.4:+96281048 | None:intergenic |
| TGCTGAAGCAGCGCCGGCTT+CGG | 0.338988 | 3.4:-96285971 | MS.gene69107:CDS |
| GATAAACCCCTCAACCTTTA+CGG | 0.340743 | 3.4:+96280910 | None:intergenic |
| GTTTCTGGTATTCTTTCCTT+TGG | 0.350143 | 3.4:-96282883 | MS.gene69107:CDS |
| AGGTTGTTGGTGTCTATGTT+TGG | 0.356733 | 3.4:-96286338 | MS.gene69107:CDS |
| TTATATCCAGTCGACTTTGC+AGG | 0.359236 | 3.4:+96282545 | None:intergenic |
| TACTACCTGGCAAAGCATTA+AGG | 0.359896 | 3.4:+96286287 | None:intergenic |
| AGCTGGAGGAGGAGAAGATT+TGG | 0.360328 | 3.4:+96286602 | None:intergenic |
| CACTAATGTGACCTGGCTTC+AGG | 0.363655 | 3.4:+96280991 | None:intergenic |
| TGCAGCACAAGTTGGGAAAC+AGG | 0.373016 | 3.4:+96282439 | None:intergenic |
| GTCGGTGGCATTAAGGTTGT+TGG | 0.377228 | 3.4:-96286351 | MS.gene69107:CDS |
| TACAGCCAAAGAGATGTTTC+TGG | 0.381078 | 3.4:-96282898 | MS.gene69107:CDS |
| TTTGAGGTGAATTTCTGAAT+AGG | 0.384772 | 3.4:+96281064 | None:intergenic |
| TTGAATGATAGTTCTATTGA+AGG | 0.388367 | 3.4:-96283071 | MS.gene69107:intron |
| GATGAGACAGATGTTGATTC+AGG | 0.394619 | 3.4:-96282517 | MS.gene69107:CDS |
| TTACCAATTTACCGTCGATC+AGG | 0.395145 | 3.4:+96285462 | None:intergenic |
| GAAGACAAGATGAAACTTGA+TGG | 0.400681 | 3.4:-96281041 | MS.gene69107:CDS |
| CTTCTACTATCCGTCTTAGT+TGG | 0.400882 | 3.4:-96280948 | MS.gene69107:CDS |
| TCTCTTCATCGACAATGATT+GGG | 0.403324 | 3.4:-96286409 | MS.gene69107:CDS |
| AGCGGGTTCAGCGGAATCAT+TGG | 0.410520 | 3.4:+96286503 | None:intergenic |
| TTGAGTTTGAGATTTGGATT+TGG | 0.410944 | 3.4:+96286446 | None:intergenic |
| GGTTGTTGGTGTCTATGTTT+GGG | 0.419018 | 3.4:-96286337 | MS.gene69107:CDS |
| AATGAGCCATGCTCGTTAGA+AGG | 0.422050 | 3.4:-96283125 | MS.gene69107:CDS |
| TTTCTTATCGGGCTGGATGA+TGG | 0.424455 | 3.4:+96286476 | None:intergenic |
| TTATTTGCCCGTAAAGGTTG+AGG | 0.425283 | 3.4:-96280918 | None:intergenic |
| AGGATTTGAGTTACCTTCTC+GGG | 0.429096 | 3.4:+96285905 | None:intergenic |
| GCGGGTTCAGCGGAATCATT+GGG | 0.429226 | 3.4:+96286504 | None:intergenic |
| GAATACCAGAAACATCTCTT+TGG | 0.430105 | 3.4:+96282893 | None:intergenic |
| GGTTTCTGAACACGCTCGTC+AGG | 0.431299 | 3.4:-96286388 | MS.gene69107:CDS |
| TTCTCCTCCTCCAGCTGAGG+TGG | 0.434824 | 3.4:-96286595 | MS.gene69107:CDS |
| GCTGAGGTGGGTCTACTGAT+AGG | 0.436377 | 3.4:-96286582 | MS.gene69107:CDS |
| ATCAGTAGACCCACCTCAGC+TGG | 0.440463 | 3.4:+96286585 | None:intergenic |
| ATAAACCCCTCAACCTTTAC+GGG | 0.443239 | 3.4:+96280911 | None:intergenic |
| CAATAAATGCAGCACAAGTT+GGG | 0.453843 | 3.4:+96282432 | None:intergenic |
| CATTAAGGTTGAATTCTTGA+AGG | 0.456374 | 3.4:+96286302 | None:intergenic |
| CAGATACGCAAAAGAACATA+TGG | 0.457188 | 3.4:+96282855 | None:intergenic |
| TCTGGTATTCTTTCCTTTGG+TGG | 0.459621 | 3.4:-96282880 | MS.gene69107:CDS |
| CAACTAAGACGGATAGTAGA+AGG | 0.459722 | 3.4:+96280949 | None:intergenic |
| TCAATAAATGCAGCACAAGT+TGG | 0.461420 | 3.4:+96282431 | None:intergenic |
| GATCCTCAACCAATTGGAAT+CGG | 0.461577 | 3.4:+96286631 | None:intergenic |
| GCGGAATCATTGGGAGGAGT+TGG | 0.465633 | 3.4:+96286513 | None:intergenic |
| AGAAGAAACCCGATTCCAAT+TGG | 0.472267 | 3.4:-96286640 | MS.gene69107:CDS |
| GTCACTCAATGTCTGAAACT+TGG | 0.472574 | 3.4:+96285538 | None:intergenic |
| TTCAACCTTAATGCTTTGCC+AGG | 0.474584 | 3.4:-96286292 | MS.gene69107:intron |
| TTGAGATTTGGATTTGGAAG+AGG | 0.476820 | 3.4:+96286452 | None:intergenic |
| GATGAAGAGAGAAGAAGAAT+CGG | 0.476860 | 3.4:+96286422 | None:intergenic |
| ATCCTCAACCAATTGGAATC+GGG | 0.477881 | 3.4:+96286632 | None:intergenic |
| GATGAACCATCATGCAATAT+GGG | 0.478901 | 3.4:+96285560 | None:intergenic |
| TGAGGCGATCCTCAACCAAT+TGG | 0.481848 | 3.4:+96286625 | None:intergenic |
| AACTTGTGCTGCATTTATTG+AGG | 0.482705 | 3.4:-96282429 | MS.gene69107:intron |
| AAGGATTTGAGTTACCTTCT+CGG | 0.489926 | 3.4:+96285904 | None:intergenic |
| AATGTTAGTCGGTGGCATTA+AGG | 0.491892 | 3.4:-96286358 | MS.gene69107:CDS |
| AGGAAAATTCAGCTCCGCAT+TGG | 0.494706 | 3.4:-96286562 | MS.gene69107:CDS |
| GGCATGGTGAAAGGCGTTGT+CGG | 0.494989 | 3.4:-96286663 | MS.gene69107:CDS |
| GGGAGTTGCTGAAGCAGCGC+CGG | 0.496925 | 3.4:-96285977 | MS.gene69107:CDS |
| TACAAGCCTGCAAAGTCGAC+TGG | 0.497312 | 3.4:-96282551 | MS.gene69107:CDS |
| TATTTGCCCGTAAAGGTTGA+GGG | 0.499574 | 3.4:-96280917 | None:intergenic |
| CACATTAGTGTTGTAGCTGC+CGG | 0.499950 | 3.4:-96280978 | MS.gene69107:CDS |
| CTTGCCTTCCAACATCATGA+TGG | 0.500147 | 3.4:+96282491 | None:intergenic |
| TGAAGCAGCGCCGGCTTCGG+AGG | 0.505191 | 3.4:-96285968 | MS.gene69107:CDS |
| TGTACCCTTGCAGACTGTGA+AGG | 0.507316 | 3.4:-96285998 | MS.gene69107:intron |
| AACCCGATTCCAATTGGTTG+AGG | 0.512410 | 3.4:-96286634 | MS.gene69107:CDS |
| GGGCTGGATGATGGAGGAAG+CGG | 0.520494 | 3.4:+96286485 | None:intergenic |
| GGCTGGATGATGGAGGAAGC+GGG | 0.524033 | 3.4:+96286486 | None:intergenic |
| GAGGTGAATTTCTGAATAGG+AGG | 0.525367 | 3.4:+96281067 | None:intergenic |
| GCAGCCTTCTGAGACTGTTG+AGG | 0.527649 | 3.4:-96281293 | MS.gene69107:intron |
| ATCTGTTCATGCCAAAGAGC+TGG | 0.529357 | 3.4:-96285498 | MS.gene69107:CDS |
| TCTCCTCCTCCAGCTGAGGT+GGG | 0.530633 | 3.4:-96286594 | MS.gene69107:CDS |
| TCCCAGTTAACCTCCGAAGC+CGG | 0.531096 | 3.4:+96285958 | None:intergenic |
| ATCTTCTCCTCCTCCAGCTG+AGG | 0.536726 | 3.4:-96286598 | MS.gene69107:CDS |
| AAGAAACGCGGCATGGTGAA+AGG | 0.538367 | 3.4:-96286672 | None:intergenic |
| TCAGGTAACCATCATGATGT+TGG | 0.538554 | 3.4:-96282499 | MS.gene69107:CDS |
| GCCGGCTTCGGAGGTTAACT+GGG | 0.541698 | 3.4:-96285959 | MS.gene69107:CDS |
| AGACCCACCTCAGCTGGAGG+AGG | 0.549560 | 3.4:+96286591 | None:intergenic |
| TACCAATTTACCGTCGATCA+GGG | 0.549914 | 3.4:+96285463 | None:intergenic |
| ATGAAGAGAGAAGAAGAATC+GGG | 0.554824 | 3.4:+96286423 | None:intergenic |
| ATAGAACTATCATTCAAGAA+TGG | 0.559917 | 3.4:+96283077 | None:intergenic |
| AAAATTGTAGAGATATCAGT+TGG | 0.560424 | 3.4:+96281149 | None:intergenic |
| TTTGTGTTATTTGCCCGTAA+AGG | 0.562982 | 3.4:-96280924 | MS.gene69107:CDS |
| GTACCCTTGCAGACTGTGAA+GGG | 0.563055 | 3.4:-96285997 | MS.gene69107:intron |
| AGGTTACCCATATTGCATGA+TGG | 0.567249 | 3.4:-96285566 | MS.gene69107:CDS |
| AGTGATAAACTCCTGAAGCC+AGG | 0.570317 | 3.4:-96281002 | MS.gene69107:CDS |
| GATGGAGGAAGCGGGTTCAG+CGG | 0.582275 | 3.4:+96286494 | None:intergenic |
| AGGTGAATTTCTGAATAGGA+GGG | 0.591017 | 3.4:+96281068 | None:intergenic |
| AGAACATATGGCGCCACCAA+AGG | 0.592128 | 3.4:+96282867 | None:intergenic |
| CAGGTTTCTAGAATGTTAGT+CGG | 0.593964 | 3.4:-96286369 | MS.gene69107:CDS |
| GGATAGTAGAAGGATGAGAC+CGG | 0.594606 | 3.4:+96280959 | None:intergenic |
| AAATTTGTTATGGCCCGAGA+AGG | 0.596928 | 3.4:-96285918 | MS.gene69107:intron |
| GATGCAAAAGCCCTGATCGA+CGG | 0.605969 | 3.4:-96285473 | MS.gene69107:CDS |
| AAACTCTTCTAGGAAAAGGA+AGG | 0.609411 | 3.4:+96281356 | None:intergenic |
| TAACACAAAACCAACTAAGA+CGG | 0.610323 | 3.4:+96280938 | None:intergenic |
| CAAACCTCAACAGTCTCAGA+AGG | 0.613004 | 3.4:+96281289 | None:intergenic |
| CTTATCGGGCTGGATGATGG+AGG | 0.616857 | 3.4:+96286479 | None:intergenic |
| GTAACCATCATGATGTTGGA+AGG | 0.622279 | 3.4:-96282495 | MS.gene69107:CDS |
| TGCACACCTTCTAACGAGCA+TGG | 0.625139 | 3.4:+96283119 | None:intergenic |
| AATCAACATCTGTCTCATCA+CGG | 0.639174 | 3.4:+96282521 | None:intergenic |
| AGTAGACCCACCTCAGCTGG+AGG | 0.640870 | 3.4:+96286588 | None:intergenic |
| AAGATGAAACTTGATGGCAG+AGG | 0.642265 | 3.4:-96281035 | MS.gene69107:CDS |
| GTTTCTAGAATGTTAGTCGG+TGG | 0.644878 | 3.4:-96286366 | MS.gene69107:CDS |
| TGTTGGAAGGCAAGTAAGCG+AGG | 0.658912 | 3.4:-96282482 | MS.gene69107:CDS |
| GAGGAGGAGAAGATTTGGTG+AGG | 0.660746 | 3.4:+96286607 | None:intergenic |
| GCTACAACACTAATGTGACC+TGG | 0.663414 | 3.4:+96280984 | None:intergenic |
| GGTTCAGCGGAATCATTGGG+AGG | 0.702919 | 3.4:+96286507 | None:intergenic |
| GAGAAAGACGCGATCCAATG+CGG | 0.713214 | 3.4:+96286548 | None:intergenic |
| ACATACGTCCCAGCTAACCA+CGG | 0.723439 | 3.4:+96281328 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAAAATATCATATTATATC+TGG | - | chr3.4:96283640-96283659 | MS.gene69107:intron | 10.0% |
| !! | TTCTTAAATTACATTATTAT+CGG | + | chr3.4:96281426-96281445 | None:intergenic | 10.0% |
| !!! | ATAAAATATCATATTTTATC+TGG | - | chr3.4:96282434-96282453 | MS.gene69107:CDS | 10.0% |
| !! | AATGTATCAATTATCATTTA+TGG | + | chr3.4:96286118-96286137 | None:intergenic | 15.0% |
| !! | GTTAAATTTCTATTTATACT+TGG | + | chr3.4:96284245-96284264 | None:intergenic | 15.0% |
| !! | TTTATAATGTTTACAACAAA+TGG | - | chr3.4:96285812-96285831 | MS.gene69107:intron | 15.0% |
| !!! | ATATTTAGTATTTTAAGACT+CGG | - | chr3.4:96282618-96282637 | MS.gene69107:intron | 15.0% |
| !!! | ATTGATACATTTTGTTATTT+TGG | - | chr3.4:96286127-96286146 | MS.gene69107:intron | 15.0% |
| !!! | GATTTATTTTGTACAATTTT+AGG | - | chr3.4:96283389-96283408 | MS.gene69107:intron | 15.0% |
| !!! | GTTAAATTTCTTTTTATACT+TGG | + | chr3.4:96283210-96283229 | None:intergenic | 15.0% |
| !!! | TGTAAATTGATTTTTGTATA+TGG | - | chr3.4:96281977-96281996 | MS.gene69107:intron | 15.0% |
| !! | ATGAATTATGAACATCAATA+TGG | + | chr3.4:96283122-96283141 | None:intergenic | 20.0% |
| !! | ATGAATTATGAACATCATTA+TGG | + | chr3.4:96284157-96284176 | None:intergenic | 20.0% |
| !! | TATTATTCATAAGATTGTCA+AGG | + | chr3.4:96284081-96284100 | None:intergenic | 20.0% |
| !! | TCTTAAGTTTGATATTTGTT+TGG | - | chr3.4:96284859-96284878 | MS.gene69107:intron | 20.0% |
| !! | TGAATTATGAACATCAATAT+GGG | + | chr3.4:96283121-96283140 | None:intergenic | 20.0% |
| !! | TGAATTATGAACATCATTAT+GGG | + | chr3.4:96284156-96284175 | None:intergenic | 20.0% |
| !!! | TAAGTTCTTTTCAAACTTTT+AGG | - | chr3.4:96281874-96281893 | MS.gene69107:intron | 20.0% |
| !!! | TATTTTAGTATTTTAAGACC+CGG | - | chr3.4:96283825-96283844 | MS.gene69107:intron | 20.0% |
| !!! | TTTCAGAACTAAATCTTTTT+GGG | - | chr3.4:96286478-96286497 | MS.gene69107:CDS | 20.0% |
| ! | AAAATTGTAGAGATATCAGT+TGG | + | chr3.4:96286434-96286453 | None:intergenic | 25.0% |
| ! | AACTTCTGTTCGTTTATTTA+AGG | - | chr3.4:96284832-96284851 | MS.gene69107:intron | 25.0% |
| ! | AAGAATATCCAAAATTTGTG+AGG | + | chr3.4:96281930-96281949 | None:intergenic | 25.0% |
| ! | AATTGATTATCACTTCTAGA+TGG | + | chr3.4:96286091-96286110 | None:intergenic | 25.0% |
| ! | ACTTCTGTTCGTTTATTTAA+GGG | - | chr3.4:96284833-96284852 | MS.gene69107:intron | 25.0% |
| ! | AGAGAGAAAAACAAATATCT+GGG | + | chr3.4:96283292-96283311 | None:intergenic | 25.0% |
| ! | ATAGAACTATCATTCAAGAA+TGG | + | chr3.4:96284506-96284525 | None:intergenic | 25.0% |
| ! | ATCAAATAACCATATTTCAG+GGG | + | chr3.4:96284893-96284912 | None:intergenic | 25.0% |
| ! | ATCCCACATGATATAATATT+AGG | - | chr3.4:96283142-96283161 | MS.gene69107:intron | 25.0% |
| ! | ATCCCACATGATATAATATT+TGG | - | chr3.4:96283142-96283161 | MS.gene69107:intron | 25.0% |
| ! | CATCAAATAACCATATTTCA+GGG | + | chr3.4:96284894-96284913 | None:intergenic | 25.0% |
| ! | CATCTAATAGATGGTTTATT+CGG | - | chr3.4:96285363-96285382 | MS.gene69107:intron | 25.0% |
| ! | CATTTATAGTATATACTACC+TGG | + | chr3.4:96281309-96281328 | None:intergenic | 25.0% |
| ! | CTCCAAATATTATATCATGT+GGG | + | chr3.4:96283147-96283166 | None:intergenic | 25.0% |
| ! | CTCCTAATATTATATCATGT+GGG | + | chr3.4:96284182-96284201 | None:intergenic | 25.0% |
| ! | GATGATGACAAAAACTTAAA+AGG | + | chr3.4:96285347-96285366 | None:intergenic | 25.0% |
| ! | GTATACCATATGAATATTCT+TGG | - | chr3.4:96284548-96284567 | MS.gene69107:intron | 25.0% |
| ! | TAGAGAGAAAAACAAATATC+TGG | + | chr3.4:96283293-96283312 | None:intergenic | 25.0% |
| ! | TATTATTCACAAGATTGTCA+AGG | + | chr3.4:96283032-96283051 | None:intergenic | 25.0% |
| ! | TCTCCAAATATTATATCATG+TGG | + | chr3.4:96283148-96283167 | None:intergenic | 25.0% |
| ! | TCTCCTAATATTATATCATG+TGG | + | chr3.4:96284183-96284202 | None:intergenic | 25.0% |
| ! | TGAACAAGTTAACTGAAATT+TGG | + | chr3.4:96281335-96281354 | None:intergenic | 25.0% |
| ! | TGATGTGCTTAAACTTAATA+GGG | - | chr3.4:96285985-96286004 | MS.gene69107:CDS | 25.0% |
| ! | TTGATGTGCTTAAACTTAAT+AGG | - | chr3.4:96285984-96286003 | MS.gene69107:CDS | 25.0% |
| !! | AAAGATATGACTTCTTTTTC+TGG | + | chr3.4:96286461-96286480 | None:intergenic | 25.0% |
| !! | AACTGATATCTCTACAATTT+TGG | - | chr3.4:96286433-96286452 | MS.gene69107:CDS | 25.0% |
| !! | CATACAAAAATGTGTTACTA+GGG | + | chr3.4:96285695-96285714 | None:intergenic | 25.0% |
| !! | CTTTCAGAACTAAATCTTTT+TGG | - | chr3.4:96286477-96286496 | MS.gene69107:CDS | 25.0% |
| !! | GTTAGAAGTTGTTAATTTTC+TGG | - | chr3.4:96283434-96283453 | MS.gene69107:intron | 25.0% |
| !! | TTGAATGATAGTTCTATTGA+AGG | - | chr3.4:96284509-96284528 | MS.gene69107:intron | 25.0% |
| !! | TTTTGTCATCATCTAATAGA+TGG | - | chr3.4:96285354-96285373 | MS.gene69107:intron | 25.0% |
| !!! | ATTACTTGTGATTTGTTCTT+AGG | - | chr3.4:96286367-96286386 | MS.gene69107:CDS | 25.0% |
| !!! | ATTCTATTTCTATTTTGTGC+AGG | - | chr3.4:96281769-96281788 | MS.gene69107:intron | 25.0% |
| !!! | GTTGCTATTATTTGTGATTT+TGG | - | chr3.4:96284204-96284223 | MS.gene69107:intron | 25.0% |
| !!! | TTTTGTTTGCATATCTGATT+TGG | - | chr3.4:96286333-96286352 | MS.gene69107:CDS | 25.0% |
| !!! | TTTTTGTTTCTGGTATGATA+TGG | - | chr3.4:96281741-96281760 | MS.gene69107:intron | 25.0% |
| AAAAATGAGCCAATACAAAC+AGG | - | chr3.4:96283095-96283114 | MS.gene69107:CDS | 30.0% | |
| AAACTGTATCCTATAGATTG+TGG | - | chr3.4:96282358-96282377 | MS.gene69107:intron | 30.0% | |
| AAATGAAGTTTCAAACCAAC+TGG | + | chr3.4:96284597-96284616 | None:intergenic | 30.0% | |
| AAGACAATATTGGAAAGATC+AGG | + | chr3.4:96284977-96284996 | None:intergenic | 30.0% | |
| AAGTTACCACTTATAGACAT+AGG | - | chr3.4:96282716-96282735 | MS.gene69107:intron | 30.0% | |
| ACAAGTTGTCACTGATATAA+AGG | - | chr3.4:96284768-96284787 | MS.gene69107:intron | 30.0% | |
| ACATAAAACCAACAACACTT+CGG | + | chr3.4:96281521-96281540 | None:intergenic | 30.0% | |
| ACTCTCAAAAAACACTTTAC+AGG | + | chr3.4:96286055-96286074 | None:intergenic | 30.0% | |
| AGATTGTGGATAGTGATATT+GGG | - | chr3.4:96282372-96282391 | MS.gene69107:intron | 30.0% | |
| ATTAACTCGAACTATCTCAT+AGG | - | chr3.4:96282458-96282477 | MS.gene69107:CDS | 30.0% | |
| ATTGTGATCCAAGACAATAT+TGG | + | chr3.4:96284987-96285006 | None:intergenic | 30.0% | |
| ATTTGTTTCCCTGTTCTATT+AGG | - | chr3.4:96283721-96283740 | MS.gene69107:intron | 30.0% | |
| CATTAAGGTTGAATTCTTGA+AGG | + | chr3.4:96281281-96281300 | None:intergenic | 30.0% | |
| CCATCAAATAACCATATTTC+AGG | + | chr3.4:96284895-96284914 | None:intergenic | 30.0% | |
| CCTGAAATATGGTTATTTGA+TGG | - | chr3.4:96284892-96284911 | MS.gene69107:intron | 30.0% | |
| GACACTGAAGAAAATTAATG+AGG | - | chr3.4:96282776-96282795 | MS.gene69107:intron | 30.0% | |
| GAGAGAAAAACAAATATCTG+GGG | + | chr3.4:96283291-96283310 | None:intergenic | 30.0% | |
| GCTGATGATAAAATCTTAGA+AGG | + | chr3.4:96285294-96285313 | None:intergenic | 30.0% | |
| GCTTTGACCTGAATTTAAAA+GGG | + | chr3.4:96282832-96282851 | None:intergenic | 30.0% | |
| GTATGCACAACTTTAATCTT+AGG | - | chr3.4:96281898-96281917 | MS.gene69107:intron | 30.0% | |
| TAACACAAAACCAACTAAGA+CGG | + | chr3.4:96286645-96286664 | None:intergenic | 30.0% | |
| TAGATTGTGGATAGTGATAT+TGG | - | chr3.4:96282371-96282390 | MS.gene69107:intron | 30.0% | |
| TAGCAAAGTTGTTAATTCTC+TGG | - | chr3.4:96282236-96282255 | MS.gene69107:intron | 30.0% | |
| TATCACTATCCACAATCTAT+AGG | + | chr3.4:96282370-96282389 | None:intergenic | 30.0% | |
| TGACAAAAACTTAAAAGGCA+AGG | + | chr3.4:96285342-96285361 | None:intergenic | 30.0% | |
| TGATCAAACTAAATCACAAG+AGG | + | chr3.4:96283486-96283505 | None:intergenic | 30.0% | |
| TGATCTTTCCAATATTGTCT+TGG | - | chr3.4:96284976-96284995 | MS.gene69107:intron | 30.0% | |
| TGCAACCAAGAATATTCATA+TGG | + | chr3.4:96284556-96284575 | None:intergenic | 30.0% | |
| TGTTCAAACTAAATCACAAG+AGG | + | chr3.4:96282280-96282299 | None:intergenic | 30.0% | |
| TTAAACTTAATAGGGTGCAA+TGG | - | chr3.4:96285993-96286012 | MS.gene69107:intron | 30.0% | |
| TTAATCTCTTCTTTGTTCCT+TGG | - | chr3.4:96283532-96283551 | MS.gene69107:intron | 30.0% | |
| TTCACTCAATAAACACATGA+GGG | + | chr3.4:96284922-96284941 | None:intergenic | 30.0% | |
| ! | ACATCAAGATTTTTGTAGCA+GGG | + | chr3.4:96285537-96285556 | None:intergenic | 30.0% |
| ! | ACGATTAATGATTTTCGTGT+TGG | - | chr3.4:96281365-96281384 | MS.gene69107:CDS | 30.0% |
| ! | ATCTTGTCACTTCTAATTTG+TGG | - | chr3.4:96282154-96282173 | MS.gene69107:intron | 30.0% |
| ! | GCATACAAAAATGTGTTACT+AGG | + | chr3.4:96285696-96285715 | None:intergenic | 30.0% |
| ! | TAATTTTCTTCAGTGTCAGA+GGG | + | chr3.4:96282773-96282792 | None:intergenic | 30.0% |
| ! | TACATCAAGATTTTTGTAGC+AGG | + | chr3.4:96285538-96285557 | None:intergenic | 30.0% |
| ! | TCTTGTTTCATAAGCAAATG+TGG | + | chr3.4:96282742-96282761 | None:intergenic | 30.0% |
| ! | TTAATTTTCTTCAGTGTCAG+AGG | + | chr3.4:96282774-96282793 | None:intergenic | 30.0% |
| ! | TTGAGTTTGAGATTTGGATT+TGG | + | chr3.4:96281137-96281156 | None:intergenic | 30.0% |
| ! | TTTATTGACTAGAGTAGACT+TGG | - | chr3.4:96281953-96281972 | MS.gene69107:intron | 30.0% |
| ! | TTTGAGGTGAATTTCTGAAT+AGG | + | chr3.4:96286519-96286538 | None:intergenic | 30.0% |
| ! | TTTGGAAGAGGTTTTCTTAT+CGG | + | chr3.4:96281119-96281138 | None:intergenic | 30.0% |
| ! | TTTTATCATCAGCTACTAGA+TGG | - | chr3.4:96285301-96285320 | MS.gene69107:intron | 30.0% |
| !! | CTACTTCTGCAAATTTGTTA+TGG | - | chr3.4:96281652-96281671 | MS.gene69107:intron | 30.0% |
| !! | CTATTATTTGTGATTTTGGC+TGG | - | chr3.4:96284208-96284227 | MS.gene69107:intron | 30.0% |
| !! | GTTGCTGTTATTTGTGATTT+TGG | - | chr3.4:96283169-96283188 | MS.gene69107:intron | 30.0% |
| !!! | ACTTTTGTTATTTCTCCAGT+TGG | - | chr3.4:96284579-96284598 | MS.gene69107:intron | 30.0% |
| !!! | AGTTGATGAGTTTTTGTTTC+TGG | - | chr3.4:96281731-96281750 | MS.gene69107:intron | 30.0% |
| !!! | GGTTTTAAAAGATCACTGTA+TGG | - | chr3.4:96286388-96286407 | MS.gene69107:CDS | 30.0% |
| !!! | TCCCCATTTTAAAATCACAA+GGG | + | chr3.4:96281848-96281867 | None:intergenic | 30.0% |
| !!! | TTCCCCATTTTAAAATCACA+AGG | + | chr3.4:96281849-96281868 | None:intergenic | 30.0% |
| !!! | TTGTGATTTTAAAATGGGGA+AGG | - | chr3.4:96281848-96281867 | MS.gene69107:intron | 30.0% |
| AAAAATGAGCCAATCCAAAC+AGG | - | chr3.4:96284130-96284149 | MS.gene69107:intron | 35.0% | |
| AAAGATCAGGAAGTGAATGA+GGG | + | chr3.4:96284964-96284983 | None:intergenic | 35.0% | |
| AAATGTTCCAAACCAGAGTA+TGG | + | chr3.4:96286157-96286176 | None:intergenic | 35.0% | |
| AACTTGTGCTGCATTTATTG+AGG | - | chr3.4:96285151-96285170 | MS.gene69107:intron | 35.0% | |
| AAGCTACCACTTATAGACAT+AGG | - | chr3.4:96283927-96283946 | MS.gene69107:intron | 35.0% | |
| AATCAACATCTGTCTCATCA+CGG | + | chr3.4:96285062-96285081 | None:intergenic | 35.0% | |
| AATGTTCCAAACCAGAGTAT+GGG | + | chr3.4:96286156-96286175 | None:intergenic | 35.0% | |
| ACTCCTAATCCTAATAGAAC+AGG | + | chr3.4:96282527-96282546 | None:intergenic | 35.0% | |
| AGCTACCACTTATAGACATA+GGG | - | chr3.4:96283928-96283947 | MS.gene69107:intron | 35.0% | |
| AGGTGAATTTCTGAATAGGA+GGG | + | chr3.4:96286515-96286534 | None:intergenic | 35.0% | |
| ATAAAACGTGCATGTGTAAG+TGG | - | chr3.4:96282680-96282699 | MS.gene69107:intron | 35.0% | |
| ATATGGTATCGTGTCTTACA+AGG | - | chr3.4:96281994-96282013 | MS.gene69107:intron | 35.0% | |
| ATCAACTAAATCACCACCTT+TGG | + | chr3.4:96281718-96281737 | None:intergenic | 35.0% | |
| ATCTGTTTCCCTGTTCTATT+AGG | - | chr3.4:96282515-96282534 | MS.gene69107:CDS | 35.0% | |
| ATGAAGAGAGAAGAAGAATC+GGG | + | chr3.4:96281160-96281179 | None:intergenic | 35.0% | |
| CAATAAATGCAGCACAAGTT+GGG | + | chr3.4:96285151-96285170 | None:intergenic | 35.0% | |
| CAGATACGCAAAAGAACATA+TGG | + | chr3.4:96284728-96284747 | None:intergenic | 35.0% | |
| CCTGGTGTAAAATAGAATCT+CGG | - | chr3.4:96285624-96285643 | MS.gene69107:intron | 35.0% | |
| CTCCTAATCCTAATAGAACA+GGG | + | chr3.4:96282526-96282545 | None:intergenic | 35.0% | |
| CTTCACTCAATAAACACATG+AGG | + | chr3.4:96284923-96284942 | None:intergenic | 35.0% | |
| GAAATATCTCCCCTGAAATA+TGG | - | chr3.4:96284881-96284900 | MS.gene69107:intron | 35.0% | |
| GAAGACAAGATGAAACTTGA+TGG | - | chr3.4:96286539-96286558 | MS.gene69107:CDS | 35.0% | |
| GAATACCAGAAACATCTCTT+TGG | + | chr3.4:96284690-96284709 | None:intergenic | 35.0% | |
| GATGAACCATCATGCAATAT+GGG | + | chr3.4:96282023-96282042 | None:intergenic | 35.0% | |
| GATGAAGAGAGAAGAAGAAT+CGG | + | chr3.4:96281161-96281180 | None:intergenic | 35.0% | |
| GGATCACAATTATGTGCATA+GGG | - | chr3.4:96284997-96285016 | MS.gene69107:intron | 35.0% | |
| GTGTTTAAGCTAGTGCAATA+TGG | - | chr3.4:96285466-96285485 | MS.gene69107:CDS | 35.0% | |
| GTTTCATCTTGTCTTCTTTG+AGG | + | chr3.4:96286535-96286554 | None:intergenic | 35.0% | |
| TAAAACGTGCATGTGTAAGT+GGG | - | chr3.4:96282681-96282700 | MS.gene69107:intron | 35.0% | |
| TCAAACTACATTGTTGCAAC+CGG | + | chr3.4:96283847-96283866 | None:intergenic | 35.0% | |
| TCAACTAAATCACCACCTTT+GGG | + | chr3.4:96281717-96281736 | None:intergenic | 35.0% | |
| TCAATAAATGCAGCACAAGT+TGG | + | chr3.4:96285152-96285171 | None:intergenic | 35.0% | |
| TCAGTGACAACTTGTGAAAT+TGG | + | chr3.4:96284763-96284782 | None:intergenic | 35.0% | |
| TCTCTTCATCGACAATGATT+GGG | - | chr3.4:96281171-96281190 | MS.gene69107:CDS | 35.0% | |
| TGATAAAATCTTAGAAGGCG+AGG | + | chr3.4:96285289-96285308 | None:intergenic | 35.0% | |
| TGATCATGTTAAGCTTAAGC+AGG | + | chr3.4:96285561-96285580 | None:intergenic | 35.0% | |
| TGGATCACAATTATGTGCAT+AGG | - | chr3.4:96284996-96285015 | MS.gene69107:intron | 35.0% | |
| TTAACAACTTCTAACGAGCA+CGG | + | chr3.4:96283429-96283448 | None:intergenic | 35.0% | |
| TTAGAAGTGACAAGATAGAG+TGG | + | chr3.4:96282150-96282169 | None:intergenic | 35.0% | |
| TTCCCTGTTCTATTAGGATT+AGG | - | chr3.4:96282521-96282540 | MS.gene69107:CDS | 35.0% | |
| TTCTATTAGGATTAGGAGTC+TGG | - | chr3.4:96282528-96282547 | MS.gene69107:CDS | 35.0% | |
| TTGAGATTTGGATTTGGAAG+AGG | + | chr3.4:96281131-96281150 | None:intergenic | 35.0% | |
| TTTATGTAGCTCTCTTGGTT+AGG | - | chr3.4:96281534-96281553 | MS.gene69107:intron | 35.0% | |
| ! | AAACTCTTCTAGGAAAAGGA+AGG | + | chr3.4:96286227-96286246 | None:intergenic | 35.0% |
| ! | AAGGATTTGAGTTACCTTCT+CGG | + | chr3.4:96281679-96281698 | None:intergenic | 35.0% |
| ! | AATTTTCTTCAGTGTCAGAG+GGG | + | chr3.4:96282772-96282791 | None:intergenic | 35.0% |
| ! | CATCAAGATTTTTGTAGCAG+GGG | + | chr3.4:96285536-96285555 | None:intergenic | 35.0% |
| ! | CGAGATTCTATTTTACACCA+GGG | + | chr3.4:96285626-96285645 | None:intergenic | 35.0% |
| ! | GCAAAAACTCTTCTAGGAAA+AGG | + | chr3.4:96286231-96286250 | None:intergenic | 35.0% |
| ! | GGCTTTGACCTGAATTTAAA+AGG | + | chr3.4:96282833-96282852 | None:intergenic | 35.0% |
| ! | GGTAACAACCTCACAAATTT+TGG | - | chr3.4:96281919-96281938 | MS.gene69107:intron | 35.0% |
| ! | TACAGTTTTCTATTGCAGCA+AGG | + | chr3.4:96282346-96282365 | None:intergenic | 35.0% |
| ! | TGGGATTCCCTTTTAAATTC+AGG | - | chr3.4:96282822-96282841 | MS.gene69107:CDS | 35.0% |
| ! | TTATAGACATAGGGCTTGTT+TGG | - | chr3.4:96283937-96283956 | MS.gene69107:intron | 35.0% |
| ! | TTGGAAGAGGTTTTCTTATC+GGG | + | chr3.4:96281118-96281137 | None:intergenic | 35.0% |
| !! | ACGCCCTTGTGATTTTAAAA+TGG | - | chr3.4:96281842-96281861 | MS.gene69107:intron | 35.0% |
| !! | CAGGTTTCTAGAATGTTAGT+CGG | - | chr3.4:96281211-96281230 | MS.gene69107:intron | 35.0% |
| !! | GTTTCTGGTATTCTTTCCTT+TGG | - | chr3.4:96284697-96284716 | MS.gene69107:intron | 35.0% |
| !! | TATTTTGGATTCCCATACTC+TGG | - | chr3.4:96286142-96286161 | MS.gene69107:intron | 35.0% |
| !! | TTTGTGTTATTTGCCCGTAA+AGG | - | chr3.4:96286656-96286675 | MS.gene69107:CDS | 35.0% |
| !!! | CGCCCTTGTGATTTTAAAAT+GGG | - | chr3.4:96281843-96281862 | MS.gene69107:intron | 35.0% |
| !!! | CTATTTCTATTTTGTGCAGG+TGG | - | chr3.4:96281772-96281791 | MS.gene69107:intron | 35.0% |
| !!! | GCATATCTGATTTGGTTTTG+AGG | - | chr3.4:96286341-96286360 | MS.gene69107:CDS | 35.0% |
| !!! | GCCCTTGTGATTTTAAAATG+GGG | - | chr3.4:96281844-96281863 | MS.gene69107:intron | 35.0% |
| !!! | TTGGTTTTATGTAGCTCTCT+TGG | - | chr3.4:96281529-96281548 | MS.gene69107:intron | 35.0% |
| AACAAAACGAGCGGAAATCT+AGG | + | chr3.4:96285754-96285773 | None:intergenic | 40.0% | |
| AACATCATTATGGGCCTGTT+TGG | + | chr3.4:96284147-96284166 | None:intergenic | 40.0% | |
| AAGATTAACAACACCTAGGG+TGG | + | chr3.4:96284303-96284322 | None:intergenic | 40.0% | |
| AATGGTTTCTCCTTTCTCAG+TGG | - | chr3.4:96286011-96286030 | MS.gene69107:intron | 40.0% | |
| AATGTTAGTCGGTGGCATTA+AGG | - | chr3.4:96281222-96281241 | MS.gene69107:intron | 40.0% | |
| ACAAGCCCTATGTCTATAAG+TGG | + | chr3.4:96283936-96283955 | None:intergenic | 40.0% | |
| AGAAGAAACCCGATTCCAAT+TGG | - | chr3.4:96280940-96280959 | MS.gene69107:CDS | 40.0% | |
| AGATTAACAACACCTAGGGT+GGG | + | chr3.4:96284302-96284321 | None:intergenic | 40.0% | |
| AGGTTACCCATATTGCATGA+TGG | - | chr3.4:96282014-96282033 | MS.gene69107:intron | 40.0% | |
| ATCCTCAACCAATTGGAATC+GGG | + | chr3.4:96280951-96280970 | None:intergenic | 40.0% | |
| ATGGTTTCTCCTTTCTCAGT+GGG | - | chr3.4:96286012-96286031 | MS.gene69107:intron | 40.0% | |
| ATGTGGCCTATGTCTATAAG+TGG | + | chr3.4:96282725-96282744 | None:intergenic | 40.0% | |
| CAAACTACATTGTTGCAACC+GGG | + | chr3.4:96283846-96283865 | None:intergenic | 40.0% | |
| CAACTAAGACGGATAGTAGA+AGG | + | chr3.4:96286634-96286653 | None:intergenic | 40.0% | |
| CAATATGGGCCTGTTTGTAT+TGG | + | chr3.4:96283107-96283126 | None:intergenic | 40.0% | |
| CAATTACGCTGAGAACAACT+GGG | - | chr3.4:96282803-96282822 | MS.gene69107:intron | 40.0% | |
| CAGTTGTTCTCAGCGTAATT+GGG | + | chr3.4:96282804-96282823 | None:intergenic | 40.0% | |
| CTATTGTGTTACACTCCCAA+AGG | - | chr3.4:96281699-96281718 | MS.gene69107:intron | 40.0% | |
| CTCTCTTCATCGACAATGAT+TGG | - | chr3.4:96281170-96281189 | MS.gene69107:CDS | 40.0% | |
| CTTCTACTATCCGTCTTAGT+TGG | - | chr3.4:96286632-96286651 | MS.gene69107:CDS | 40.0% | |
| GAAAGATCAGGAAGTGAATG+AGG | + | chr3.4:96284965-96284984 | None:intergenic | 40.0% | |
| GAAGATGCTATGAAGCTGAT+TGG | + | chr3.4:96285732-96285751 | None:intergenic | 40.0% | |
| GAGGTGAATTTCTGAATAGG+AGG | + | chr3.4:96286516-96286535 | None:intergenic | 40.0% | |
| GATATCAGTTGGAGCTTTCA+TGG | + | chr3.4:96286423-96286442 | None:intergenic | 40.0% | |
| GATCCTCAACCAATTGGAAT+CGG | + | chr3.4:96280952-96280971 | None:intergenic | 40.0% | |
| GGATGAACCATCATGCAATA+TGG | + | chr3.4:96282024-96282043 | None:intergenic | 40.0% | |
| GGGAAGATTAACAACACCTA+GGG | + | chr3.4:96284306-96284325 | None:intergenic | 40.0% | |
| GTAACCATCATGATGTTGGA+AGG | - | chr3.4:96285085-96285104 | MS.gene69107:intron | 40.0% | |
| GTATTGTGTCCCTATGACAA+GGG | - | chr3.4:96282550-96282569 | MS.gene69107:CDS | 40.0% | |
| GTATTGTGTCCCTATGAGAA+GGG | - | chr3.4:96283756-96283775 | MS.gene69107:intron | 40.0% | |
| GTGGATAGTGATATTGGGTT+GGG | - | chr3.4:96282377-96282396 | MS.gene69107:intron | 40.0% | |
| TACAGCCAAAGAGATGTTTC+TGG | - | chr3.4:96284682-96284701 | MS.gene69107:intron | 40.0% | |
| TACCAATTTACCGTCGATCA+GGG | + | chr3.4:96282120-96282139 | None:intergenic | 40.0% | |
| TATATGCTTGTTCCTGAGTC+CGG | - | chr3.4:96285252-96285271 | MS.gene69107:intron | 40.0% | |
| TATTGTGTCCCTATGACAAG+GGG | - | chr3.4:96282551-96282570 | MS.gene69107:CDS | 40.0% | |
| TATTGTGTCCCTATGAGAAG+GGG | - | chr3.4:96283757-96283776 | MS.gene69107:intron | 40.0% | |
| TCAGGTAACCATCATGATGT+TGG | - | chr3.4:96285081-96285100 | MS.gene69107:intron | 40.0% | |
| TCTGGTATTCTTTCCTTTGG+TGG | - | chr3.4:96284700-96284719 | MS.gene69107:intron | 40.0% | |
| TGTATTGTGTCCCTATGAGA+AGG | - | chr3.4:96283755-96283774 | MS.gene69107:intron | 40.0% | |
| TGTGGATAGTGATATTGGGT+TGG | - | chr3.4:96282376-96282395 | MS.gene69107:intron | 40.0% | |
| TTACCAATTTACCGTCGATC+AGG | + | chr3.4:96282121-96282140 | None:intergenic | 40.0% | |
| TTCAACCTTAATGCTTTGCC+AGG | - | chr3.4:96281288-96281307 | MS.gene69107:intron | 40.0% | |
| ! | AAGATGAAACTTGATGGCAG+AGG | - | chr3.4:96286545-96286564 | MS.gene69107:CDS | 40.0% |
| ! | AAGATTTTTGTAGCAGGGGT+AGG | + | chr3.4:96285532-96285551 | None:intergenic | 40.0% |
| ! | AGGATTTGAGTTACCTTCTC+GGG | + | chr3.4:96281678-96281697 | None:intergenic | 40.0% |
| ! | AGGTTGTTGGTGTCTATGTT+TGG | - | chr3.4:96281242-96281261 | MS.gene69107:intron | 40.0% |
| ! | CCGAGATTCTATTTTACACC+AGG | + | chr3.4:96285627-96285646 | None:intergenic | 40.0% |
| ! | GGTTGTTGGTGTCTATGTTT+GGG | - | chr3.4:96281243-96281262 | MS.gene69107:intron | 40.0% |
| ! | GTCACTCAATGTCTGAAACT+TGG | + | chr3.4:96282045-96282064 | None:intergenic | 40.0% |
| ! | TACAGTTTTCTCTTGCACCA+AGG | + | chr3.4:96283552-96283571 | None:intergenic | 40.0% |
| ! | TACTACCTGGCAAAGCATTA+AGG | + | chr3.4:96281296-96281315 | None:intergenic | 40.0% |
| ! | TGGATAGTGATATTGGGTTG+GGG | - | chr3.4:96282378-96282397 | MS.gene69107:intron | 40.0% |
| ! | TGGGAGTGTAACACAATAGA+AGG | + | chr3.4:96281698-96281717 | None:intergenic | 40.0% |
| ! | TTATATCCAGTCGACTTTGC+AGG | + | chr3.4:96285038-96285057 | None:intergenic | 40.0% |
| !! | AAATTTGTTATGGCCCGAGA+AGG | - | chr3.4:96281662-96281681 | MS.gene69107:intron | 40.0% |
| !! | ATCGGGTTGAGTTTGAGATT+TGG | + | chr3.4:96281143-96281162 | None:intergenic | 40.0% |
| !! | GATGAGACAGATGTTGATTC+AGG | - | chr3.4:96285063-96285082 | MS.gene69107:intron | 40.0% |
| !! | GTTTCTAGAATGTTAGTCGG+TGG | - | chr3.4:96281214-96281233 | MS.gene69107:intron | 40.0% |
| AACCCGATTCCAATTGGTTG+AGG | - | chr3.4:96280946-96280965 | MS.gene69107:CDS | 45.0% | |
| AAGATTAACAACACCTCGGG+TGG | + | chr3.4:96283268-96283287 | None:intergenic | 45.0% | |
| AATGAGCCATGCTCGTTAGA+AGG | - | chr3.4:96284455-96284474 | MS.gene69107:intron | 45.0% | |
| AGAGGAAGGATAGTCTACAG+AGG | - | chr3.4:96285949-96285968 | MS.gene69107:CDS | 45.0% | |
| AGATTAACAACACCTCGGGT+GGG | + | chr3.4:96283267-96283286 | None:intergenic | 45.0% | |
| AGGAAAATTCAGCTCCGCAT+TGG | - | chr3.4:96281018-96281037 | MS.gene69107:CDS | 45.0% | |
| AGGAAGTGAATGAGGGAAGT+CGG | + | chr3.4:96284957-96284976 | None:intergenic | 45.0% | |
| AGGCGAGGAAACATGTAATC+CGG | + | chr3.4:96285274-96285293 | None:intergenic | 45.0% | |
| AGTAGTTCCACCTCCTAGTA+TGG | - | chr3.4:96285924-96285943 | MS.gene69107:CDS | 45.0% | |
| AGTGATAAACTCCTGAAGCC+AGG | - | chr3.4:96286578-96286597 | MS.gene69107:CDS | 45.0% | |
| ATCCTTCCTCTCTCCATACT+AGG | + | chr3.4:96285940-96285959 | None:intergenic | 45.0% | |
| ATCTGTTCATGCCAAAGAGC+TGG | - | chr3.4:96282082-96282101 | MS.gene69107:intron | 45.0% | |
| CAAACCTCAACAGTCTCAGA+AGG | + | chr3.4:96286294-96286313 | None:intergenic | 45.0% | |
| CACATTAGTGTTGTAGCTGC+CGG | - | chr3.4:96286602-96286621 | MS.gene69107:CDS | 45.0% | |
| CACCATGCTAACAAAACGAG+CGG | + | chr3.4:96285763-96285782 | None:intergenic | 45.0% | |
| CACGGTGCAAAAACTCTTCT+AGG | + | chr3.4:96286237-96286256 | None:intergenic | 45.0% | |
| CACTGTCAAGGTCAACGATT+GGG | - | chr3.4:96282866-96282885 | MS.gene69107:CDS | 45.0% | |
| CATTATGGGCCTGTTTGGAT+TGG | + | chr3.4:96284142-96284161 | None:intergenic | 45.0% | |
| CCAACAACACTTCGGATCAA+AGG | + | chr3.4:96281513-96281532 | None:intergenic | 45.0% | |
| CCAATTACGCTGAGAACAAC+TGG | - | chr3.4:96282802-96282821 | MS.gene69107:intron | 45.0% | |
| CCAGTTGTTCTCAGCGTAAT+TGG | + | chr3.4:96282805-96282824 | None:intergenic | 45.0% | |
| CTATGCATCAATCACCGAGT+TGG | - | chr3.4:96285498-96285517 | MS.gene69107:CDS | 45.0% | |
| CTTGCCTTCCAACATCATGA+TGG | + | chr3.4:96285092-96285111 | None:intergenic | 45.0% | |
| GAAACATGTAATCCGGACTC+AGG | + | chr3.4:96285267-96285286 | None:intergenic | 45.0% | |
| GCTACAACACTAATGTGACC+TGG | + | chr3.4:96286599-96286618 | None:intergenic | 45.0% | |
| GGATAGTAGAAGGATGAGAC+CGG | + | chr3.4:96286624-96286643 | None:intergenic | 45.0% | |
| GGGAAGATTAACAACACCTC+GGG | + | chr3.4:96283271-96283290 | None:intergenic | 45.0% | |
| GGGGAAGATTAACAACACCT+AGG | + | chr3.4:96283272-96283291 | None:intergenic | 45.0% | |
| GGGGAAGATTAACAACACCT+CGG | + | chr3.4:96283272-96283291 | None:intergenic | 45.0% | |
| GGTAGGTCTTTGAACCAACT+CGG | + | chr3.4:96285515-96285534 | None:intergenic | 45.0% | |
| GGTATTGTGTCCCTATGACA+AGG | - | chr3.4:96282549-96282568 | MS.gene69107:CDS | 45.0% | |
| TCACTGTCAAGGTCAACGAT+TGG | - | chr3.4:96282865-96282884 | MS.gene69107:CDS | 45.0% | |
| TGGATTCCCATACTCTGGTT+TGG | - | chr3.4:96286147-96286166 | MS.gene69107:intron | 45.0% | |
| TTGTGTTACACTCCCAAAGG+TGG | - | chr3.4:96281702-96281721 | MS.gene69107:intron | 45.0% | |
| ! | AAGAGGTTTTCTTATCGGGC+TGG | + | chr3.4:96281114-96281133 | None:intergenic | 45.0% |
| ! | ACAGTCTGCAAGGGTACAAA+AGG | + | chr3.4:96281580-96281599 | None:intergenic | 45.0% |
| ! | AGTCTGCAAGGGTACAAAAG+GGG | + | chr3.4:96281578-96281597 | None:intergenic | 45.0% |
| ! | ATTTTTCTTCCACCCACCCT+AGG | - | chr3.4:96284287-96284306 | MS.gene69107:intron | 45.0% |
| ! | CAGTCTGCAAGGGTACAAAA+GGG | + | chr3.4:96281579-96281598 | None:intergenic | 45.0% |
| ! | CTAGAAGAGTTTTTGCACCG+TGG | - | chr3.4:96286235-96286254 | MS.gene69107:intron | 45.0% |
| ! | GTGAGTGTGAGTGTCATTGT+CGG | - | chr3.4:96281475-96281494 | MS.gene69107:intron | 45.0% |
| ! | TGGTTTATTCGGTGATGACG+TGG | - | chr3.4:96285374-96285393 | MS.gene69107:intron | 45.0% |
| ! | TTTCTTATCGGGCTGGATGA+TGG | + | chr3.4:96281107-96281126 | None:intergenic | 45.0% |
| ! | TTTTGCATCTGCCAGCTCTT+TGG | + | chr3.4:96282096-96282115 | None:intergenic | 45.0% |
| !! | CCTTTGATCCGAAGTGTTGT+TGG | - | chr3.4:96281510-96281529 | MS.gene69107:intron | 45.0% |
| !! | CTTCTGAGACTGTTGAGGTT+TGG | - | chr3.4:96286292-96286311 | MS.gene69107:intron | 45.0% |
| !! | GTTGATGATCCCACTGAGAA+AGG | + | chr3.4:96286024-96286043 | None:intergenic | 45.0% |
| !! | GTTTTGTTAGCATGGTGGCA+AGG | - | chr3.4:96285766-96285785 | MS.gene69107:CDS | 45.0% |
| !! | TTCCGCTCGTTTTGTTAGCA+TGG | - | chr3.4:96285758-96285777 | MS.gene69107:CDS | 45.0% |
| !! | TTTTTGCACCGTGGTTAGCT+GGG | - | chr3.4:96286244-96286263 | MS.gene69107:intron | 45.0% |
| AACTCCCTTCACAGTCTGCA+AGG | + | chr3.4:96281590-96281609 | None:intergenic | 50.0% | |
| ACATACGTCCCAGCTAACCA+CGG | + | chr3.4:96286255-96286274 | None:intergenic | 50.0% | |
| ACTCCCTTCACAGTCTGCAA+GGG | + | chr3.4:96281589-96281608 | None:intergenic | 50.0% | |
| AGAACATATGGCGCCACCAA+AGG | + | chr3.4:96284716-96284735 | None:intergenic | 50.0% | |
| AGCCCTGATCGACGGTAAAT+TGG | - | chr3.4:96282115-96282134 | MS.gene69107:intron | 50.0% | |
| AGCTGGAGGAGGAGAAGATT+TGG | + | chr3.4:96280981-96281000 | None:intergenic | 50.0% | |
| AGCTGTAGCCCCTTCTCATA+GGG | + | chr3.4:96283768-96283787 | None:intergenic | 50.0% | |
| CAAGGTCAACGATTGGGAGA+GGG | - | chr3.4:96282872-96282891 | MS.gene69107:CDS | 50.0% | |
| CACTAATGTGACCTGGCTTC+AGG | + | chr3.4:96286592-96286611 | None:intergenic | 50.0% | |
| CTCCTAGTATGGAGAGAGGA+AGG | - | chr3.4:96285935-96285954 | MS.gene69107:CDS | 50.0% | |
| CTCTCTCTCTCTCTCTCTCT+CGG | - | chr3.4:96285839-96285858 | MS.gene69107:intron | 50.0% | |
| CTTCCTCTCTCCATACTAGG+AGG | + | chr3.4:96285937-96285956 | None:intergenic | 50.0% | |
| GAGAAAGACGCGATCCAATG+CGG | + | chr3.4:96281035-96281054 | None:intergenic | 50.0% | |
| GATGCAAAAGCCCTGATCGA+CGG | - | chr3.4:96282107-96282126 | MS.gene69107:intron | 50.0% | |
| GCATCAGCATCGTAACAAGG+TGG | + | chr3.4:96285604-96285623 | None:intergenic | 50.0% | |
| GTACCCTTGCAGACTGTGAA+GGG | - | chr3.4:96281583-96281602 | MS.gene69107:intron | 50.0% | |
| GTCGGTGGCATTAAGGTTGT+TGG | - | chr3.4:96281229-96281248 | MS.gene69107:intron | 50.0% | |
| TACAAGCCTGCAAAGTCGAC+TGG | - | chr3.4:96285029-96285048 | MS.gene69107:intron | 50.0% | |
| TAGCTGTAGCCCCTTCTCAT+AGG | + | chr3.4:96283769-96283788 | None:intergenic | 50.0% | |
| TCAAGGTCAACGATTGGGAG+AGG | - | chr3.4:96282871-96282890 | MS.gene69107:CDS | 50.0% | |
| TGACCTTGACAGTGAACTCG+TGG | + | chr3.4:96282860-96282879 | None:intergenic | 50.0% | |
| TGAGGCGATCCTCAACCAAT+TGG | + | chr3.4:96280958-96280977 | None:intergenic | 50.0% | |
| TGCACACCTTCTAACGAGCA+TGG | + | chr3.4:96284464-96284483 | None:intergenic | 50.0% | |
| TGTACCCTTGCAGACTGTGA+AGG | - | chr3.4:96281582-96281601 | MS.gene69107:intron | 50.0% | |
| TGTTGGAAGGCAAGTAAGCG+AGG | - | chr3.4:96285098-96285117 | MS.gene69107:intron | 50.0% | |
| TTAACAACACCTAGGGTGGG+TGG | + | chr3.4:96284299-96284318 | None:intergenic | 50.0% | |
| TTGTTACGATGCTGATGCCC+TGG | - | chr3.4:96285606-96285625 | MS.gene69107:intron | 50.0% | |
| ! | AGCTCTAGCCCCTTGTCATA+GGG | + | chr3.4:96282562-96282581 | None:intergenic | 50.0% |
| ! | AGGGCATCAGCATCGTAACA+AGG | + | chr3.4:96285607-96285626 | None:intergenic | 50.0% |
| ! | ATTTTTCTTCCACCCACCCG+AGG | - | chr3.4:96283252-96283271 | MS.gene69107:intron | 50.0% |
| ! | CTTCGGATCAAAGGTGTGTC+AGG | + | chr3.4:96281504-96281523 | None:intergenic | 50.0% |
| ! | GTTTTTGCACCGTGGTTAGC+TGG | - | chr3.4:96286243-96286262 | MS.gene69107:intron | 50.0% |
| ! | TGCAGCACAAGTTGGGAAAC+AGG | + | chr3.4:96285144-96285163 | None:intergenic | 50.0% |
| !! | CGCTCGTTTTGTTAGCATGG+TGG | - | chr3.4:96285761-96285780 | MS.gene69107:CDS | 50.0% |
| !! | GAGGAGGAGAAGATTTGGTG+AGG | + | chr3.4:96280976-96280995 | None:intergenic | 50.0% |
| !! | TAGCTCTAGCCCCTTGTCAT+AGG | + | chr3.4:96282563-96282582 | None:intergenic | 50.0% |
| AACGATTGGGAGAGGGAGCA+AGG | - | chr3.4:96282879-96282898 | MS.gene69107:CDS | 55.0% | |
| ACGATTGGGAGAGGGAGCAA+GGG | - | chr3.4:96282880-96282899 | MS.gene69107:CDS | 55.0% | |
| ATCAGTAGACCCACCTCAGC+TGG | + | chr3.4:96280998-96281017 | None:intergenic | 55.0% | |
| ATCTTCTCCTCCTCCAGCTG+AGG | - | chr3.4:96280982-96281001 | MS.gene69107:CDS | 55.0% | |
| CCACCTCCTAGTATGGAGAG+AGG | - | chr3.4:96285931-96285950 | MS.gene69107:CDS | 55.0% | |
| CCTCTCTCCATACTAGGAGG+TGG | + | chr3.4:96285934-96285953 | None:intergenic | 55.0% | |
| CGTCCACGAGTTCACTGTCA+AGG | - | chr3.4:96282854-96282873 | MS.gene69107:CDS | 55.0% | |
| GCGGAATCATTGGGAGGAGT+TGG | + | chr3.4:96281070-96281089 | None:intergenic | 55.0% | |
| GCGGGTTCAGCGGAATCATT+GGG | + | chr3.4:96281079-96281098 | None:intergenic | 55.0% | |
| GCTGAGGTGGGTCTACTGAT+AGG | - | chr3.4:96280998-96281017 | MS.gene69107:CDS | 55.0% | |
| GGTTCAGCGGAATCATTGGG+AGG | + | chr3.4:96281076-96281095 | None:intergenic | 55.0% | |
| GGTTTCTGAACACGCTCGTC+AGG | - | chr3.4:96281192-96281211 | MS.gene69107:CDS | 55.0% | |
| TCCCAGTTAACCTCCGAAGC+CGG | + | chr3.4:96281625-96281644 | None:intergenic | 55.0% | |
| TGACAGTGAACTCGTGGACG+AGG | + | chr3.4:96282854-96282873 | None:intergenic | 55.0% | |
| TTAACAACACCTCGGGTGGG+TGG | + | chr3.4:96283264-96283283 | None:intergenic | 55.0% | |
| ! | AGAGGGAGCAAGGGCTTGTT+TGG | - | chr3.4:96282889-96282908 | MS.gene69107:CDS | 55.0% |
| ! | AGCGGGTTCAGCGGAATCAT+TGG | + | chr3.4:96281080-96281099 | None:intergenic | 55.0% |
| ! | CTTATCGGGCTGGATGATGG+AGG | + | chr3.4:96281104-96281123 | None:intergenic | 55.0% |
| !! | GCAGCCTTCTGAGACTGTTG+AGG | - | chr3.4:96286287-96286306 | MS.gene69107:intron | 55.0% |
| AGTAGACCCACCTCAGCTGG+AGG | + | chr3.4:96280995-96281014 | None:intergenic | 60.0% | |
| TCTCCTCCTCCAGCTGAGGT+GGG | - | chr3.4:96280986-96281005 | MS.gene69107:CDS | 60.0% | |
| TTCTCCTCCTCCAGCTGAGG+TGG | - | chr3.4:96280985-96281004 | MS.gene69107:CDS | 60.0% | |
| ! | GATGGAGGAAGCGGGTTCAG+CGG | + | chr3.4:96281089-96281108 | None:intergenic | 60.0% |
| ! | GCCGGCTTCGGAGGTTAACT+GGG | - | chr3.4:96281621-96281640 | MS.gene69107:intron | 60.0% |
| !! | GGCTGGATGATGGAGGAAGC+GGG | + | chr3.4:96281097-96281116 | None:intergenic | 60.0% |
| !! | GGGCTGGATGATGGAGGAAG+CGG | + | chr3.4:96281098-96281117 | None:intergenic | 60.0% |
| AGACCCACCTCAGCTGGAGG+AGG | + | chr3.4:96280992-96281011 | None:intergenic | 65.0% | |
| GGGAGTTGCTGAAGCAGCGC+CGG | - | chr3.4:96281603-96281622 | MS.gene69107:intron | 65.0% | |
| !! | CGCCGGCTTCGGAGGTTAAC+TGG | - | chr3.4:96281620-96281639 | MS.gene69107:intron | 65.0% |
| !! | TGCTGAAGCAGCGCCGGCTT+CGG | - | chr3.4:96281609-96281628 | MS.gene69107:intron | 65.0% |
| !! | TGAAGCAGCGCCGGCTTCGG+AGG | - | chr3.4:96281612-96281631 | MS.gene69107:intron | 70.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.4 | gene | 96280920 | 96286682 | 96280920 | ID=MS.gene69107 |
| chr3.4 | mRNA | 96280920 | 96286682 | 96280920 | ID=MS.gene69107.t1;Parent=MS.gene69107 |
| chr3.4 | exon | 96286293 | 96286682 | 96286293 | ID=MS.gene69107.t1.exon1;Parent=MS.gene69107.t1 |
| chr3.4 | CDS | 96286293 | 96286682 | 96286293 | ID=cds.MS.gene69107.t1;Parent=MS.gene69107.t1 |
| chr3.4 | exon | 96285919 | 96286007 | 96285919 | ID=MS.gene69107.t1.exon2;Parent=MS.gene69107.t1 |
| chr3.4 | CDS | 96285919 | 96286007 | 96285919 | ID=cds.MS.gene69107.t1;Parent=MS.gene69107.t1 |
| chr3.4 | exon | 96285683 | 96285811 | 96285683 | ID=MS.gene69107.t1.exon3;Parent=MS.gene69107.t1 |
| chr3.4 | CDS | 96285683 | 96285811 | 96285683 | ID=cds.MS.gene69107.t1;Parent=MS.gene69107.t1 |
| chr3.4 | exon | 96285466 | 96285586 | 96285466 | ID=MS.gene69107.t1.exon4;Parent=MS.gene69107.t1 |
| chr3.4 | CDS | 96285466 | 96285586 | 96285466 | ID=cds.MS.gene69107.t1;Parent=MS.gene69107.t1 |
| chr3.4 | exon | 96283072 | 96283156 | 96283072 | ID=MS.gene69107.t1.exon5;Parent=MS.gene69107.t1 |
| chr3.4 | CDS | 96283072 | 96283156 | 96283072 | ID=cds.MS.gene69107.t1;Parent=MS.gene69107.t1 |
| chr3.4 | exon | 96282813 | 96282922 | 96282813 | ID=MS.gene69107.t1.exon6;Parent=MS.gene69107.t1 |
| chr3.4 | CDS | 96282813 | 96282922 | 96282813 | ID=cds.MS.gene69107.t1;Parent=MS.gene69107.t1 |
| chr3.4 | exon | 96282430 | 96282584 | 96282430 | ID=MS.gene69107.t1.exon7;Parent=MS.gene69107.t1 |
| chr3.4 | CDS | 96282430 | 96282584 | 96282430 | ID=cds.MS.gene69107.t1;Parent=MS.gene69107.t1 |
| chr3.4 | exon | 96281294 | 96281390 | 96281294 | ID=MS.gene69107.t1.exon8;Parent=MS.gene69107.t1 |
| chr3.4 | CDS | 96281294 | 96281390 | 96281294 | ID=cds.MS.gene69107.t1;Parent=MS.gene69107.t1 |
| chr3.4 | exon | 96280920 | 96281213 | 96280920 | ID=MS.gene69107.t1.exon9;Parent=MS.gene69107.t1 |
| chr3.4 | CDS | 96280920 | 96281213 | 96280920 | ID=cds.MS.gene69107.t1;Parent=MS.gene69107.t1 |
| Gene Sequence |
| Protein sequence |
