Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69403.t1 | XP_003603753.2 | 87.7 | 618 | 60 | 5 | 32 | 645 | 27 | 632 | 1.30E-299 | 1038.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69403.t1 | A0A072V326 | 87.7 | 618 | 60 | 5 | 32 | 645 | 27 | 632 | 9.6e-300 | 1038.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059124 | MS.gene69403 | 0.806106 | 9.66E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69403.t1 | MTR_3g113840 | 89.538 | 650 | 47 | 6 | 1 | 646 | 1 | 633 | 0.0 | 1140 |
| MS.gene69403.t1 | MTR_3g113840 | 89.538 | 650 | 47 | 6 | 1 | 646 | 1 | 633 | 0.0 | 1139 |
| MS.gene69403.t1 | MTR_1g025180 | 42.645 | 673 | 295 | 19 | 1 | 649 | 1 | 606 | 3.59e-131 | 400 |
| MS.gene69403.t1 | MTR_1g025180 | 40.078 | 514 | 242 | 12 | 143 | 649 | 1 | 455 | 5.36e-88 | 283 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene69403.t1 | AT1G75730 | 24.961 | 641 | 297 | 24 | 1 | 595 | 3 | 505 | 1.21e-19 | 93.6 |
| MS.gene69403.t1 | AT1G75730 | 24.961 | 641 | 297 | 24 | 1 | 595 | 3 | 505 | 1.21e-19 | 93.6 |
Find 129 sgRNAs with CRISPR-Local
Find 235 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| ATTCTATTCTTTGGAACTTA+TGG | 0.194319 | 3.3:+93189071 | None:intergenic |
| TGTCTTCCACTTTGCCAATT+AGG | 0.196746 | 3.3:+93186472 | None:intergenic |
| CACTTTGCCAATTAGGATAT+TGG | 0.201063 | 3.3:+93186479 | None:intergenic |
| AACTGGGAGTGCAGATAATT+TGG | 0.212539 | 3.3:-93188513 | MS.gene69403:CDS |
| CAAATTCAACCTTACCAAAA+AGG | 0.225070 | 3.3:-93189453 | MS.gene69403:intron |
| TTTGAGGAGATTCTATTCTT+TGG | 0.248258 | 3.3:+93189062 | None:intergenic |
| TATTCCTGAAAGTTCGTCTA+TGG | 0.256540 | 3.3:-93188588 | MS.gene69403:CDS |
| AACAGCAGTACCAAAACTTT+TGG | 0.262893 | 3.3:-93186558 | MS.gene69403:CDS |
| AACAGTTCATTCTGCTAGTT+TGG | 0.272000 | 3.3:-93187354 | MS.gene69403:CDS |
| TTCATAACGCTCGGGTTCTT+TGG | 0.275673 | 3.3:+93187475 | None:intergenic |
| GCTCCCATAGACGAACTTTC+AGG | 0.285687 | 3.3:+93188584 | None:intergenic |
| CTCAAAGGTTGAAGTTATCT+TGG | 0.300072 | 3.3:+93186372 | None:intergenic |
| TTGCAGCAACCTCATTATTA+TGG | 0.302661 | 3.3:-93186625 | MS.gene69403:CDS |
| AGGTTGAATTTGTTGTATTT+AGG | 0.302997 | 3.3:+93189464 | None:intergenic |
| TGAGGGTCCAATATCCTAAT+TGG | 0.304830 | 3.3:-93186486 | MS.gene69403:CDS |
| TTGATAGAAAGTTGTTCTTC+AGG | 0.316118 | 3.3:-93187716 | MS.gene69403:CDS |
| ATTGATCAGAATGATTTAAC+TGG | 0.322938 | 3.3:-93188530 | MS.gene69403:CDS |
| CTCTGAATTGTCTCTTGAAA+TGG | 0.324418 | 3.3:-93188399 | MS.gene69403:CDS |
| TGAAACTTGTGCAGTGAATC+TGG | 0.324504 | 3.3:-93186449 | MS.gene69403:CDS |
| GTCCTTGTCCTTGTCCTTGT+CGG | 0.331154 | 3.3:-93187122 | MS.gene69403:CDS |
| GAGTGAAAATGGTTGCAAAT+TGG | 0.343246 | 3.3:-93188432 | MS.gene69403:CDS |
| GAAGTTGAGGTATGCTGATT+TGG | 0.347436 | 3.3:+93186959 | None:intergenic |
| GTTGCGCCGCCCAAAAGTTT+TGG | 0.348462 | 3.3:+93186548 | None:intergenic |
| ATCCTTGGTGTACTCTGGTT+TGG | 0.359717 | 3.3:+93187447 | None:intergenic |
| GGCTGGAGGTAACGGGTTAA+AGG | 0.362203 | 3.3:-93187101 | MS.gene69403:CDS |
| ACTTTCTATCAAATCGTGTT+TGG | 0.363416 | 3.3:+93187727 | None:intergenic |
| ACACCCTGCAGATTTACTTT+TGG | 0.366352 | 3.3:+93188470 | None:intergenic |
| TGTTGTATAGACCGAAAATA+AGG | 0.370517 | 3.3:+93187016 | None:intergenic |
| ATGATGGTTAAGAGTGAAAA+TGG | 0.371375 | 3.3:-93188443 | MS.gene69403:CDS |
| AACTCGAATGGGACGAGAAA+TGG | 0.373040 | 3.3:-93187395 | MS.gene69403:CDS |
| TGCAGAGACTCTCTATGCTT+TGG | 0.376262 | 3.3:-93188861 | MS.gene69403:CDS |
| TCCTTGTCGGCTGGAGGTAA+CGG | 0.377666 | 3.3:-93187109 | MS.gene69403:CDS |
| TTGTCCTTGTCCTTGTCGGC+TGG | 0.382248 | 3.3:-93187118 | MS.gene69403:CDS |
| TGCTGATTTGGTGGAGTTGT+AGG | 0.388895 | 3.3:+93186971 | None:intergenic |
| TCTTGACATATCTCTCTCTA+AGG | 0.396806 | 3.3:-93187282 | MS.gene69403:CDS |
| AATATCAGCAATGAAGAAAC+GGG | 0.406475 | 3.3:-93189131 | MS.gene69403:intron |
| CGAGTCCTTACCGAAGAATT+CGG | 0.409344 | 3.3:-93188786 | MS.gene69403:CDS |
| CTAGTAGCACAAGGTGGGTC+TGG | 0.411401 | 3.3:-93186526 | MS.gene69403:CDS |
| TTTGTTGTATTTAGGAGAAT+CGG | 0.416757 | 3.3:+93189472 | None:intergenic |
| CCTCATCAATTCCACTATCT+AGG | 0.421292 | 3.3:-93186331 | MS.gene69403:CDS |
| TCTGAATTGTCTCTTGAAAT+GGG | 0.422269 | 3.3:-93188398 | MS.gene69403:CDS |
| TATTATGGTACACCATTATG+TGG | 0.435287 | 3.3:-93186610 | MS.gene69403:CDS |
| TTCGGTTTCACAGGAACAAA+AGG | 0.437622 | 3.3:-93188768 | MS.gene69403:CDS |
| CTATTATTAGTTCCACATAA+TGG | 0.439799 | 3.3:+93186598 | None:intergenic |
| CCTTGTCGGCTGGAGGTAAC+GGG | 0.442680 | 3.3:-93187108 | MS.gene69403:CDS |
| AGAGAGATATGTCAAGATAA+TGG | 0.446148 | 3.3:+93187288 | None:intergenic |
| CGCTCCAAAAGTAAATCTGC+AGG | 0.449581 | 3.3:-93188474 | MS.gene69403:CDS |
| GTCTACTTCATTCTCAGCAT+TGG | 0.450102 | 3.3:+93188811 | None:intergenic |
| GTGGTCCTGCAGCAGGAAGC+TGG | 0.456358 | 3.3:+93186927 | None:intergenic |
| TCCTGTGAAACCGAATTCTT+CGG | 0.456531 | 3.3:+93188776 | None:intergenic |
| GAATTGATGAGGCGAGTGTA+AGG | 0.459497 | 3.3:+93186342 | None:intergenic |
| TTGTAGAAACAAGTTGTACT+TGG | 0.464145 | 3.3:-93188911 | MS.gene69403:intron |
| TTCACATTAGTCAGCTCATC+CGG | 0.466693 | 3.3:-93187526 | MS.gene69403:CDS |
| GAACAAAAGGAGAGTACTAA+TGG | 0.467191 | 3.3:-93188755 | MS.gene69403:intron |
| ACCGAAGAATTCGGTTTCAC+AGG | 0.471174 | 3.3:-93188777 | MS.gene69403:CDS |
| ATCCCATTCATCCTAGATAG+TGG | 0.474398 | 3.3:+93186320 | None:intergenic |
| TTTGGTGGAGTTGTAGGTAT+TGG | 0.474409 | 3.3:+93186977 | None:intergenic |
| ATCAAGTATCAAAGAGAAAA+CGG | 0.478846 | 3.3:-93188094 | MS.gene69403:intron |
| CTCAGCATTGGAACCACCAT+TGG | 0.482488 | 3.3:+93188823 | None:intergenic |
| GTGTAAATAGCAATGATATG+AGG | 0.483660 | 3.3:-93186504 | MS.gene69403:CDS |
| CAGCCAATGTGGAGCTTTAG+CGG | 0.484628 | 3.3:+93187769 | None:intergenic |
| TAATATCAGCAATGAAGAAA+CGG | 0.489112 | 3.3:-93189132 | MS.gene69403:intron |
| ATTGACCAGCTTCCTGCTGC+AGG | 0.490356 | 3.3:-93186932 | MS.gene69403:CDS |
| CTTGCATCGCTAGAATCACT+TGG | 0.490776 | 3.3:-93186397 | MS.gene69403:CDS |
| GATGCACTCTGTGTCGAGCC+TGG | 0.491536 | 3.3:+93187935 | None:intergenic |
| AAAACCTGTGGTCCTGCAGC+AGG | 0.492294 | 3.3:+93186920 | None:intergenic |
| GAGACTCTCTATGCTTTGGC+TGG | 0.496876 | 3.3:-93188857 | MS.gene69403:CDS |
| GCTGGAATGTTTCCTACCAA+TGG | 0.501796 | 3.3:-93188839 | MS.gene69403:CDS |
| TCAAAGCACAAAACTCGAAT+GGG | 0.504724 | 3.3:-93187406 | MS.gene69403:CDS |
| AATGGTGAGGAAGCATGACT+TGG | 0.507180 | 3.3:+93186422 | None:intergenic |
| ATTATTTCAAGTGAAACCAT+TGG | 0.510308 | 3.3:-93188554 | MS.gene69403:CDS |
| GCTTCCTGCTGCAGGACCAC+AGG | 0.510338 | 3.3:-93186924 | MS.gene69403:intron |
| TTGGTGACATTCATAACGCT+CGG | 0.513538 | 3.3:+93187466 | None:intergenic |
| GTTCCTCGTAAAATACGTTC+AGG | 0.513690 | 3.3:-93189296 | MS.gene69403:intron |
| ATTCCTGAAAGTTCGTCTAT+GGG | 0.519875 | 3.3:-93188587 | MS.gene69403:CDS |
| CCCGTTACCTCCAGCCGACA+AGG | 0.534047 | 3.3:+93187108 | None:intergenic |
| TGGTGACATTCATAACGCTC+GGG | 0.541223 | 3.3:+93187467 | None:intergenic |
| CGGTCTATACAACAGCAGCA+TGG | 0.541990 | 3.3:-93187007 | MS.gene69403:CDS |
| TGTAGCTCAAGCATTATCAA+TGG | 0.544033 | 3.3:-93189507 | MS.gene69403:CDS |
| GTAGCTCAAGCATTATCAAT+GGG | 0.544151 | 3.3:-93189506 | MS.gene69403:CDS |
| GGTCTATACAACAGCAGCAT+GGG | 0.548529 | 3.3:-93187006 | MS.gene69403:CDS |
| GTGTAAGGGTTGTTGCTCAA+AGG | 0.551064 | 3.3:+93186357 | None:intergenic |
| ATCATTCTGATCAATACCAA+TGG | 0.551927 | 3.3:+93188538 | None:intergenic |
| GGAATGTTTCCTACCAATGG+TGG | 0.553981 | 3.3:-93188836 | MS.gene69403:CDS |
| TCCTTGTCCTTGTCGGCTGG+AGG | 0.556265 | 3.3:-93187115 | MS.gene69403:CDS |
| TTACTAAAGGTGGAAGTAGG+AGG | 0.556560 | 3.3:-93187066 | MS.gene69403:CDS |
| TGTAGAAACAAGTTGTACTT+GGG | 0.560171 | 3.3:-93188910 | MS.gene69403:intron |
| ATCAAAGCACAAAACTCGAA+TGG | 0.560488 | 3.3:-93187407 | MS.gene69403:CDS |
| ATAGAAAGTTGTTCTTCAGG+TGG | 0.562476 | 3.3:-93187713 | MS.gene69403:CDS |
| GTTGAGGTATGCTGATTTGG+TGG | 0.563195 | 3.3:+93186962 | None:intergenic |
| AATCAAAGAAAGAGAAGGTG+AGG | 0.566669 | 3.3:-93189541 | MS.gene69403:CDS |
| AAGTTGTTCTTCAGGTGGAA+AGG | 0.570061 | 3.3:-93187708 | MS.gene69403:intron |
| CAAGTGATTCTAGCGATGCA+AGG | 0.571104 | 3.3:+93186398 | None:intergenic |
| TGTAAATAGCAATGATATGA+GGG | 0.572021 | 3.3:-93186503 | MS.gene69403:CDS |
| CAACTTACGTTTCAGGTCGG+AGG | 0.572082 | 3.3:-93188145 | MS.gene69403:intron |
| ATTCTAGCGATGCAAGGGAA+TGG | 0.572802 | 3.3:+93186404 | None:intergenic |
| ATGCGAAAATTGCGATTCTG+TGG | 0.573543 | 3.3:+93188283 | None:intergenic |
| CAATATCCTAATTGGCAAAG+TGG | 0.576099 | 3.3:-93186478 | MS.gene69403:CDS |
| TGGGAGTGCAGATAATTTGG+TGG | 0.577284 | 3.3:-93188510 | MS.gene69403:CDS |
| GAAACTTGTGCAGTGAATCT+GGG | 0.583635 | 3.3:-93186448 | MS.gene69403:CDS |
| CGCAACTAGTAGCACAAGGT+GGG | 0.583774 | 3.3:-93186531 | MS.gene69403:CDS |
| GAAGGTCTAACATTATTGCC+AGG | 0.584206 | 3.3:-93187953 | MS.gene69403:CDS |
| TGAAACCGAATTCTTCGGTA+AGG | 0.587875 | 3.3:+93188781 | None:intergenic |
| CTGGTCAATGTAAGAAGTTG+AGG | 0.589439 | 3.3:+93186946 | None:intergenic |
| TGAGCTGCACAACTCTTCCA+TGG | 0.591097 | 3.3:+93187551 | None:intergenic |
| AAGTGATTCTAGCGATGCAA+GGG | 0.596529 | 3.3:+93186399 | None:intergenic |
| TCTGCAGGGTGTGCCTATGA+TGG | 0.600551 | 3.3:-93188459 | MS.gene69403:CDS |
| AATGGTGTACCATAATAATG+AGG | 0.610035 | 3.3:+93186616 | None:intergenic |
| ATGGTGAGGAAGCATGACTT+GGG | 0.613871 | 3.3:+93186423 | None:intergenic |
| ACCTCCAGCCGACAAGGACA+AGG | 0.617062 | 3.3:+93187114 | None:intergenic |
| TTGATCAGAATGATTTAACT+GGG | 0.621738 | 3.3:-93188529 | MS.gene69403:CDS |
| CTGCCGCTAAAGCTCCACAT+TGG | 0.622063 | 3.3:-93187772 | MS.gene69403:CDS |
| GCATTGGAACCACCATTGGT+AGG | 0.624573 | 3.3:+93188827 | None:intergenic |
| CATAACAAAAGATGAGCAAG+AGG | 0.627060 | 3.3:-93188885 | MS.gene69403:CDS |
| CTGAATTGTCTCTTGAAATG+GGG | 0.628928 | 3.3:-93188397 | MS.gene69403:intron |
| AATTCTTCGGTAAGGACTCG+TGG | 0.635755 | 3.3:+93188789 | None:intergenic |
| CCTAGATAGTGGAATTGATG+AGG | 0.637744 | 3.3:+93186331 | None:intergenic |
| AATTGATGAGGCGAGTGTAA+GGG | 0.639183 | 3.3:+93186343 | None:intergenic |
| AGCCGACAAGGACAAGGACA+AGG | 0.643080 | 3.3:+93187120 | None:intergenic |
| GCGCAACTAGTAGCACAAGG+TGG | 0.655162 | 3.3:-93186532 | MS.gene69403:CDS |
| AATAGACGTGGAGTATGAGA+CGG | 0.672484 | 3.3:-93188249 | MS.gene69403:intron |
| GTACACCAAGGATCAAAATG+TGG | 0.672626 | 3.3:-93187437 | MS.gene69403:CDS |
| AGGAACAGAGGAATGATCAA+CGG | 0.675989 | 3.3:+93189313 | None:intergenic |
| ATAGCAGCATTCAGCCAATG+TGG | 0.677604 | 3.3:+93187758 | None:intergenic |
| GCTCCAAAAGTAAATCTGCA+GGG | 0.679556 | 3.3:-93188473 | MS.gene69403:CDS |
| GCGGCGCAACTAGTAGCACA+AGG | 0.688856 | 3.3:-93186535 | MS.gene69403:CDS |
| AGCGATGCAAGGGAATGGTG+AGG | 0.702857 | 3.3:+93186409 | None:intergenic |
| ATATCAGCAATGAAGAAACG+GGG | 0.741833 | 3.3:-93189130 | MS.gene69403:intron |
| CACCAAACCAGAGTACACCA+AGG | 0.743871 | 3.3:-93187449 | MS.gene69403:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAATTATTATTATTA+TGG | + | chr3.3:93186839-93186858 | None:intergenic | 0.0% |
| !! | AAAAGTTTAAAAAAAGAAAA+AGG | + | chr3.3:93187080-93187099 | None:intergenic | 10.0% |
| !! | AAATTTAAATCATAATAAAG+AGG | + | chr3.3:93187046-93187065 | None:intergenic | 10.0% |
| !!! | AAAAAAAGTGAAAATATTTT+TGG | + | chr3.3:93186631-93186650 | None:intergenic | 10.0% |
| !!! | TATTGATTATTTCATTTTGT+AGG | - | chr3.3:93186690-93186709 | MS.gene69403:intron | 15.0% |
| !!! | TTCTCTTTTTGATAAATAAT+AGG | - | chr3.3:93186472-93186491 | MS.gene69403:CDS | 15.0% |
| !! | TATCATTACAGTAACAAATT+AGG | + | chr3.3:93189349-93189368 | None:intergenic | 20.0% |
| !!! | CTTAATGAACTACAAATTTT+AGG | - | chr3.3:93189180-93189199 | MS.gene69403:intron | 20.0% |
| !!! | TAGAAAACAAAAAACCTTTT+TGG | + | chr3.3:93186608-93186627 | None:intergenic | 20.0% |
| ! | ATCAAGTATCAAAGAGAAAA+CGG | - | chr3.3:93187950-93187969 | MS.gene69403:CDS | 25.0% |
| ! | ATTGATCAGAATGATTTAAC+TGG | - | chr3.3:93187514-93187533 | MS.gene69403:CDS | 25.0% |
| ! | CTATTATTAGTTCCACATAA+TGG | + | chr3.3:93189449-93189468 | None:intergenic | 25.0% |
| ! | GAAAAAAAATCCATCGAATT+TGG | + | chr3.3:93188239-93188258 | None:intergenic | 25.0% |
| ! | GAAAAAATCAAAGAAAGAGA+AGG | - | chr3.3:93186498-93186517 | MS.gene69403:CDS | 25.0% |
| ! | GTTCATTAAGATAACATCAT+AGG | + | chr3.3:93189170-93189189 | None:intergenic | 25.0% |
| ! | TAATATCAGCAATGAAGAAA+CGG | - | chr3.3:93186912-93186931 | MS.gene69403:intron | 25.0% |
| ! | TATTTATCAACTTACGTTTC+AGG | - | chr3.3:93187892-93187911 | MS.gene69403:intron | 25.0% |
| ! | TGTAAATAGCAATGATATGA+GGG | - | chr3.3:93189541-93189560 | MS.gene69403:CDS | 25.0% |
| ! | TTAGAAGTTCCAAAAAAACA+TGG | - | chr3.3:93188544-93188563 | MS.gene69403:CDS | 25.0% |
| ! | TTATTGTTCAAACATGAATG+TGG | - | chr3.3:93189240-93189259 | MS.gene69403:intron | 25.0% |
| ! | TTGATCAGAATGATTTAACT+GGG | - | chr3.3:93187515-93187534 | MS.gene69403:CDS | 25.0% |
| !! | ATTATTTCAAGTGAAACCAT+TGG | - | chr3.3:93187490-93187509 | MS.gene69403:CDS | 25.0% |
| !! | ATTTTCCCTGAAACTAAAAA+TGG | - | chr3.3:93188715-93188734 | MS.gene69403:intron | 25.0% |
| !! | CTTTTCTGAATCAGTTAAAA+CGG | + | chr3.3:93186948-93186967 | None:intergenic | 25.0% |
| !! | TTCTTTATGCTATCTTTTTG+AGG | + | chr3.3:93187001-93187020 | None:intergenic | 25.0% |
| !! | TTTGTTGTATTTAGGAGAAT+CGG | + | chr3.3:93186575-93186594 | None:intergenic | 25.0% |
| !!! | AACAAAAAACCTTTTTGGTA+AGG | + | chr3.3:93186603-93186622 | None:intergenic | 25.0% |
| !!! | AATCACAATTGCCTTATTTT+CGG | - | chr3.3:93189017-93189036 | MS.gene69403:intron | 25.0% |
| !!! | AATGGAAATAGTTTTGATGT+TGG | - | chr3.3:93188667-93188686 | MS.gene69403:intron | 25.0% |
| !!! | AGAATACCATTTTTAGTTTC+AGG | + | chr3.3:93188724-93188743 | None:intergenic | 25.0% |
| !!! | AGGTTGAATTTGTTGTATTT+AGG | + | chr3.3:93186583-93186602 | None:intergenic | 25.0% |
| !!! | ATTCTATTCTTTGGAACTTA+TGG | + | chr3.3:93186976-93186995 | None:intergenic | 25.0% |
| !!! | GAATACCATTTTTAGTTTCA+GGG | + | chr3.3:93188723-93188742 | None:intergenic | 25.0% |
| !!! | TAAGTTGATAAATAAGACAC+CGG | + | chr3.3:93187886-93187905 | None:intergenic | 25.0% |
| !!! | TAGTATTTTTGAAGATGAAG+AGG | + | chr3.3:93186655-93186674 | None:intergenic | 25.0% |
| !!! | TCGATGGATTTTTTTTCATA+AGG | - | chr3.3:93188242-93188261 | MS.gene69403:intron | 25.0% |
| AACAAAAAACAGCAACAATC+TGG | - | chr3.3:93186375-93186394 | MS.gene69403:CDS | 30.0% | |
| AATATAATCATCAGAGCATG+AGG | + | chr3.3:93188875-93188894 | None:intergenic | 30.0% | |
| AATATCAGCAATGAAGAAAC+GGG | - | chr3.3:93186913-93186932 | MS.gene69403:intron | 30.0% | |
| AATGGTGTACCATAATAATG+AGG | + | chr3.3:93189431-93189450 | None:intergenic | 30.0% | |
| ACAAGGTCAAAATGAAGTTA+AGG | + | chr3.3:93188175-93188194 | None:intergenic | 30.0% | |
| ACTTTCTATCAAATCGTGTT+TGG | + | chr3.3:93188320-93188339 | None:intergenic | 30.0% | |
| AGAGAGATATGTCAAGATAA+TGG | + | chr3.3:93188759-93188778 | None:intergenic | 30.0% | |
| AGGTTTAGTAATACTCACTT+TGG | + | chr3.3:93187026-93187045 | None:intergenic | 30.0% | |
| ATCATTCTGATCAATACCAA+TGG | + | chr3.3:93187509-93187528 | None:intergenic | 30.0% | |
| ATGATGGTTAAGAGTGAAAA+TGG | - | chr3.3:93187601-93187620 | MS.gene69403:intron | 30.0% | |
| ATTAAACATAGGCATTTGAG+TGG | + | chr3.3:93188436-93188455 | None:intergenic | 30.0% | |
| ATTTGGATAAGCAGAAATGA+AGG | + | chr3.3:93188222-93188241 | None:intergenic | 30.0% | |
| CAAATTCAACCTTACCAAAA+AGG | - | chr3.3:93186591-93186610 | MS.gene69403:CDS | 30.0% | |
| GTGTAAATAGCAATGATATG+AGG | - | chr3.3:93189540-93189559 | MS.gene69403:CDS | 30.0% | |
| TAAAACAACCAAAGATGTCT+AGG | + | chr3.3:93188068-93188087 | None:intergenic | 30.0% | |
| TAAGCTGTCTTTGTAAAAGA+TGG | + | chr3.3:93189208-93189227 | None:intergenic | 30.0% | |
| TATTATGGTACACCATTATG+TGG | - | chr3.3:93189434-93189453 | MS.gene69403:intron | 30.0% | |
| TCTGAATTGTCTCTTGAAAT+GGG | - | chr3.3:93187646-93187665 | MS.gene69403:intron | 30.0% | |
| TGCATTCAATTAAAGCATGA+GGG | + | chr3.3:93189392-93189411 | None:intergenic | 30.0% | |
| TGTAGAAACAAGTTGTACTT+GGG | - | chr3.3:93187134-93187153 | MS.gene69403:CDS | 30.0% | |
| TGTTGTATAGACCGAAAATA+AGG | + | chr3.3:93189031-93189050 | None:intergenic | 30.0% | |
| TTGATAGAAAGTTGTTCTTC+AGG | - | chr3.3:93188328-93188347 | MS.gene69403:intron | 30.0% | |
| TTGTAGAAACAAGTTGTACT+TGG | - | chr3.3:93187133-93187152 | MS.gene69403:CDS | 30.0% | |
| TTTGAGGAGATTCTATTCTT+TGG | + | chr3.3:93186985-93187004 | None:intergenic | 30.0% | |
| TTTGGATAAGCAGAAATGAA+GGG | + | chr3.3:93188221-93188240 | None:intergenic | 30.0% | |
| ! | AAGCAGTGATTTTTCTTACT+TGG | - | chr3.3:93188008-93188027 | MS.gene69403:intron | 30.0% |
| ! | AATCGCAATTTTCGCATATT+GGG | - | chr3.3:93187767-93187786 | MS.gene69403:CDS | 30.0% |
| ! | AGCAGTGATTTTTCTTACTT+GGG | - | chr3.3:93188009-93188028 | MS.gene69403:intron | 30.0% |
| ! | AGTAAGCTTATGAATGCTTT+TGG | - | chr3.3:93188822-93188841 | MS.gene69403:CDS | 30.0% |
| ! | CTTTTTATGAACAACAGGTT+CGG | + | chr3.3:93188473-93188492 | None:intergenic | 30.0% |
| ! | GTTGAAGACTGTTTTACTAA+AGG | - | chr3.3:93188965-93188984 | MS.gene69403:intron | 30.0% |
| ! | TTTTCACTCTTAACCATCAT+AGG | + | chr3.3:93187601-93187620 | None:intergenic | 30.0% |
| !! | TCTTGCTCATCTTTTGTTAT+GGG | + | chr3.3:93187160-93187179 | None:intergenic | 30.0% |
| !!! | TCTTTGGTTGTTTTAACAGA+AGG | - | chr3.3:93188073-93188092 | MS.gene69403:intron | 30.0% |
| !!! | TTTTTGGAACTTCTAAACTC+CGG | + | chr3.3:93188540-93188559 | None:intergenic | 30.0% |
| AACAGTTCATTCTGCTAGTT+TGG | - | chr3.3:93188690-93188709 | MS.gene69403:intron | 35.0% | |
| AATCAAAGAAAGAGAAGGTG+AGG | - | chr3.3:93186503-93186522 | MS.gene69403:CDS | 35.0% | |
| ATAGAAAGTTGTTCTTCAGG+TGG | - | chr3.3:93188331-93188350 | MS.gene69403:intron | 35.0% | |
| ATAGAAGAAGAAAGCGACAA+GGG | + | chr3.3:93186424-93186443 | None:intergenic | 35.0% | |
| ATATCAGCAATGAAGAAACG+GGG | - | chr3.3:93186914-93186933 | MS.gene69403:intron | 35.0% | |
| ATCAAAGCACAAAACTCGAA+TGG | - | chr3.3:93188637-93188656 | MS.gene69403:intron | 35.0% | |
| ATTCCTGAAAGTTCGTCTAT+GGG | - | chr3.3:93187457-93187476 | MS.gene69403:CDS | 35.0% | |
| CAATATCCTAATTGGCAAAG+TGG | - | chr3.3:93189566-93189585 | MS.gene69403:intron | 35.0% | |
| CACTTTGCCAATTAGGATAT+TGG | + | chr3.3:93189568-93189587 | None:intergenic | 35.0% | |
| CATAACAAAAGATGAGCAAG+AGG | - | chr3.3:93187159-93187178 | MS.gene69403:intron | 35.0% | |
| CTCAAAGGTTGAAGTTATCT+TGG | + | chr3.3:93189675-93189694 | None:intergenic | 35.0% | |
| CTCATGCTTTAATTGAATGC+AGG | - | chr3.3:93189391-93189410 | MS.gene69403:intron | 35.0% | |
| CTCTGAATTGTCTCTTGAAA+TGG | - | chr3.3:93187645-93187664 | MS.gene69403:intron | 35.0% | |
| CTGAATTGTCTCTTGAAATG+GGG | - | chr3.3:93187647-93187666 | MS.gene69403:intron | 35.0% | |
| CTGCATTCAATTAAAGCATG+AGG | + | chr3.3:93189393-93189412 | None:intergenic | 35.0% | |
| CTGTTGTTCATAAAAAGCCA+TGG | - | chr3.3:93188476-93188495 | MS.gene69403:CDS | 35.0% | |
| GACTAATACCTAGACATCTT+TGG | - | chr3.3:93188057-93188076 | MS.gene69403:intron | 35.0% | |
| GAGTGAAAATGGTTGCAAAT+TGG | - | chr3.3:93187612-93187631 | MS.gene69403:intron | 35.0% | |
| GCTTTAATTGAATGCAGGTT+CGG | - | chr3.3:93189396-93189415 | MS.gene69403:intron | 35.0% | |
| GGAAATTAGGCTACATAACA+AGG | + | chr3.3:93188192-93188211 | None:intergenic | 35.0% | |
| GGTTTATCTCTCTATCACAT+TGG | - | chr3.3:93187316-93187335 | MS.gene69403:CDS | 35.0% | |
| GTAGCTCAAGCATTATCAAT+GGG | - | chr3.3:93186538-93186557 | MS.gene69403:CDS | 35.0% | |
| GTGAGAAAGATTAAAACCTG+TGG | + | chr3.3:93189139-93189158 | None:intergenic | 35.0% | |
| TATTCCTGAAAGTTCGTCTA+TGG | - | chr3.3:93187456-93187475 | MS.gene69403:CDS | 35.0% | |
| TCAAAGCACAAAACTCGAAT+GGG | - | chr3.3:93188638-93188657 | MS.gene69403:intron | 35.0% | |
| TCTGCATCGTCATTAAACAT+AGG | + | chr3.3:93188447-93188466 | None:intergenic | 35.0% | |
| TCTTGACATATCTCTCTCTA+AGG | - | chr3.3:93188762-93188781 | MS.gene69403:CDS | 35.0% | |
| TGTAGCTCAAGCATTATCAA+TGG | - | chr3.3:93186537-93186556 | MS.gene69403:CDS | 35.0% | |
| TTCTGCTTATCCAAATTCGA+TGG | - | chr3.3:93188226-93188245 | MS.gene69403:intron | 35.0% | |
| TTGCAGCAACCTCATTATTA+TGG | - | chr3.3:93189419-93189438 | MS.gene69403:intron | 35.0% | |
| TTGGATAAGCAGAAATGAAG+GGG | + | chr3.3:93188220-93188239 | None:intergenic | 35.0% | |
| ! | AACAGCAGTACCAAAACTTT+TGG | - | chr3.3:93189486-93189505 | MS.gene69403:CDS | 35.0% |
| ! | ACAGCAGTACCAAAACTTTT+GGG | - | chr3.3:93189487-93189506 | MS.gene69403:CDS | 35.0% |
| ! | AGCGAGTTGAATCTGAAAAA+TGG | + | chr3.3:93186776-93186795 | None:intergenic | 35.0% |
| ! | AGTATCTTCAACAGCTTTTG+AGG | + | chr3.3:93187431-93187450 | None:intergenic | 35.0% |
| ! | ATCGCAATTTTCGCATATTG+GGG | - | chr3.3:93187768-93187787 | MS.gene69403:CDS | 35.0% |
| ! | CATGGCTTTTTATGAACAAC+AGG | + | chr3.3:93188478-93188497 | None:intergenic | 35.0% |
| ! | CTCTTGCTCATCTTTTGTTA+TGG | + | chr3.3:93187161-93187180 | None:intergenic | 35.0% |
| ! | GAAGACTGTTTTACTAAAGG+TGG | - | chr3.3:93188968-93188987 | MS.gene69403:intron | 35.0% |
| ! | GAATCGCAATTTTCGCATAT+TGG | - | chr3.3:93187766-93187785 | MS.gene69403:CDS | 35.0% |
| ! | GTTTTACTAAAGGTGGAAGT+AGG | - | chr3.3:93188975-93188994 | MS.gene69403:intron | 35.0% |
| ! | TATCAACTTACGTTTCAGGT+CGG | - | chr3.3:93187896-93187915 | MS.gene69403:intron | 35.0% |
| !! | AAGGAGAGTACTAATGGTAT+TGG | - | chr3.3:93187295-93187314 | MS.gene69403:CDS | 35.0% |
| !! | CATAAGCTTACTTGCTTTTG+AGG | + | chr3.3:93188814-93188833 | None:intergenic | 35.0% |
| !! | GAACAAAAGGAGAGTACTAA+TGG | - | chr3.3:93187289-93187308 | MS.gene69403:CDS | 35.0% |
| !! | TTTTGAGGATCACATTTTGC+AGG | + | chr3.3:93188799-93188818 | None:intergenic | 35.0% |
| !!! | TCTTTGGCACCATGTTTTTT+TGG | + | chr3.3:93188556-93188575 | None:intergenic | 35.0% |
| AAGTGATTCTAGCGATGCAA+GGG | + | chr3.3:93189648-93189667 | None:intergenic | 40.0% | |
| AAGTTGTTCTTCAGGTGGAA+AGG | - | chr3.3:93188336-93188355 | MS.gene69403:intron | 40.0% | |
| AATAGACGTGGAGTATGAGA+CGG | - | chr3.3:93187795-93187814 | MS.gene69403:intron | 40.0% | |
| AATTGATGAGGCGAGTGTAA+GGG | + | chr3.3:93189704-93189723 | None:intergenic | 40.0% | |
| AGGAACAGAGGAATGATCAA+CGG | + | chr3.3:93186734-93186753 | None:intergenic | 40.0% | |
| ATGCGAAAATTGCGATTCTG+TGG | + | chr3.3:93187764-93187783 | None:intergenic | 40.0% | |
| CAAAGAGAAAACGGTATGTG+AGG | - | chr3.3:93187959-93187978 | MS.gene69403:intron | 40.0% | |
| CATAGAAGAAGAAAGCGACA+AGG | + | chr3.3:93186425-93186444 | None:intergenic | 40.0% | |
| CCTCATCAATTCCACTATCT+AGG | - | chr3.3:93189713-93189732 | MS.gene69403:CDS | 40.0% | |
| CTGGTCAATGTAAGAAGTTG+AGG | + | chr3.3:93189101-93189120 | None:intergenic | 40.0% | |
| GAAACTTGTGCAGTGAATCT+GGG | - | chr3.3:93189596-93189615 | MS.gene69403:intron | 40.0% | |
| GAAGGTCTAACATTATTGCC+AGG | - | chr3.3:93188091-93188110 | MS.gene69403:intron | 40.0% | |
| GCTCCAAAAGTAAATCTGCA+GGG | - | chr3.3:93187571-93187590 | MS.gene69403:CDS | 40.0% | |
| GTACACCAAGGATCAAAATG+TGG | - | chr3.3:93188607-93188626 | MS.gene69403:CDS | 40.0% | |
| GTCTACTTCATTCTCAGCAT+TGG | + | chr3.3:93187236-93187255 | None:intergenic | 40.0% | |
| GTTCCTCGTAAAATACGTTC+AGG | - | chr3.3:93186748-93186767 | MS.gene69403:intron | 40.0% | |
| TATTGGGGGAAAAATAGACG+TGG | - | chr3.3:93187783-93187802 | MS.gene69403:CDS | 40.0% | |
| TCCTGTGAAACCGAATTCTT+CGG | + | chr3.3:93187271-93187290 | None:intergenic | 40.0% | |
| TGAAACCGAATTCTTCGGTA+AGG | + | chr3.3:93187266-93187285 | None:intergenic | 40.0% | |
| TGAAACTTGTGCAGTGAATC+TGG | - | chr3.3:93189595-93189614 | MS.gene69403:intron | 40.0% | |
| TGAGGGTCCAATATCCTAAT+TGG | - | chr3.3:93189558-93189577 | MS.gene69403:intron | 40.0% | |
| TGGATAAGCAGAAATGAAGG+GGG | + | chr3.3:93188219-93188238 | None:intergenic | 40.0% | |
| TGTCTTCCACTTTGCCAATT+AGG | + | chr3.3:93189575-93189594 | None:intergenic | 40.0% | |
| TGTTCAAACATGAATGTGGC+AGG | - | chr3.3:93189244-93189263 | MS.gene69403:intron | 40.0% | |
| TTACTAAAGGTGGAAGTAGG+AGG | - | chr3.3:93188978-93188997 | MS.gene69403:intron | 40.0% | |
| TTCACATTAGTCAGCTCATC+CGG | - | chr3.3:93188518-93188537 | MS.gene69403:CDS | 40.0% | |
| TTCGGTTTCACAGGAACAAA+AGG | - | chr3.3:93187276-93187295 | MS.gene69403:CDS | 40.0% | |
| TTTGGTGGAGTTGTAGGTAT+TGG | + | chr3.3:93189070-93189089 | None:intergenic | 40.0% | |
| ! | AACTGGGAGTGCAGATAATT+TGG | - | chr3.3:93187531-93187550 | MS.gene69403:CDS | 40.0% |
| ! | ACACCCTGCAGATTTACTTT+TGG | + | chr3.3:93187577-93187596 | None:intergenic | 40.0% |
| ! | ACATTGTCCCTTTTTCTTGG+TGG | + | chr3.3:93189298-93189317 | None:intergenic | 40.0% |
| ! | ACGTATTTTACGAGGAACAG+AGG | + | chr3.3:93186746-93186765 | None:intergenic | 40.0% |
| ! | ATTGTCCCTTTTTCTTGGTG+GGG | + | chr3.3:93189296-93189315 | None:intergenic | 40.0% |
| ! | CATTGTCCCTTTTTCTTGGT+GGG | + | chr3.3:93189297-93189316 | None:intergenic | 40.0% |
| ! | GAAGTTGAGGTATGCTGATT+TGG | + | chr3.3:93189088-93189107 | None:intergenic | 40.0% |
| ! | GTACCTGAACGTATTTTACG+AGG | + | chr3.3:93186754-93186773 | None:intergenic | 40.0% |
| ! | TCGCAATTTTCGCATATTGG+GGG | - | chr3.3:93187769-93187788 | MS.gene69403:CDS | 40.0% |
| ! | TGCACATTGTCCCTTTTTCT+TGG | + | chr3.3:93189301-93189320 | None:intergenic | 40.0% |
| ! | TTGGTGACATTCATAACGCT+CGG | + | chr3.3:93188581-93188600 | None:intergenic | 40.0% |
| !! | CCTAGATAGTGGAATTGATG+AGG | + | chr3.3:93189716-93189735 | None:intergenic | 40.0% |
| !! | CTGCAGATTTACTTTTGGAG+CGG | + | chr3.3:93187572-93187591 | None:intergenic | 40.0% |
| !! | TTTTGATCCTTGGTGTACTC+TGG | + | chr3.3:93188605-93188624 | None:intergenic | 40.0% |
| AACTCGAATGGGACGAGAAA+TGG | - | chr3.3:93188649-93188668 | MS.gene69403:intron | 45.0% | |
| AAGAAAGCGACAAGGGAAAG+AGG | + | chr3.3:93186417-93186436 | None:intergenic | 45.0% | |
| AATTCTTCGGTAAGGACTCG+TGG | + | chr3.3:93187258-93187277 | None:intergenic | 45.0% | |
| ACCGAAGAATTCGGTTTCAC+AGG | - | chr3.3:93187267-93187286 | MS.gene69403:CDS | 45.0% | |
| AGAAAGCGACAAGGGAAAGA+GGG | + | chr3.3:93186416-93186435 | None:intergenic | 45.0% | |
| ATAAGCAGAAATGAAGGGGG+TGG | + | chr3.3:93188216-93188235 | None:intergenic | 45.0% | |
| ATAGCAGCATTCAGCCAATG+TGG | + | chr3.3:93188289-93188308 | None:intergenic | 45.0% | |
| ATCATCAGAGCATGAGGAAG+AGG | + | chr3.3:93188869-93188888 | None:intergenic | 45.0% | |
| ATTCTAGCGATGCAAGGGAA+TGG | + | chr3.3:93189643-93189662 | None:intergenic | 45.0% | |
| CAAGTGATTCTAGCGATGCA+AGG | + | chr3.3:93189649-93189668 | None:intergenic | 45.0% | |
| CGAGTCCTTACCGAAGAATT+CGG | - | chr3.3:93187258-93187277 | MS.gene69403:CDS | 45.0% | |
| CGCTCCAAAAGTAAATCTGC+AGG | - | chr3.3:93187570-93187589 | MS.gene69403:CDS | 45.0% | |
| CTTGCATCGCTAGAATCACT+TGG | - | chr3.3:93189647-93189666 | MS.gene69403:intron | 45.0% | |
| GAATTGATGAGGCGAGTGTA+AGG | + | chr3.3:93189705-93189724 | None:intergenic | 45.0% | |
| GCTGGAATGTTTCCTACCAA+TGG | - | chr3.3:93187205-93187224 | MS.gene69403:intron | 45.0% | |
| GGAATGTTTCCTACCAATGG+TGG | - | chr3.3:93187208-93187227 | MS.gene69403:intron | 45.0% | |
| GGTCTATACAACAGCAGCAT+GGG | - | chr3.3:93189038-93189057 | MS.gene69403:intron | 45.0% | |
| GTGTAAGGGTTGTTGCTCAA+AGG | + | chr3.3:93189690-93189709 | None:intergenic | 45.0% | |
| TGCAGAGACTCTCTATGCTT+TGG | - | chr3.3:93187183-93187202 | MS.gene69403:intron | 45.0% | |
| TGGTGACATTCATAACGCTC+GGG | + | chr3.3:93188580-93188599 | None:intergenic | 45.0% | |
| TTCATAACGCTCGGGTTCTT+TGG | + | chr3.3:93188572-93188591 | None:intergenic | 45.0% | |
| ! | AATGGTGAGGAAGCATGACT+TGG | + | chr3.3:93189625-93189644 | None:intergenic | 45.0% |
| ! | ATCCTTGGTGTACTCTGGTT+TGG | + | chr3.3:93188600-93188619 | None:intergenic | 45.0% |
| ! | ATGGTGAGGAAGCATGACTT+GGG | + | chr3.3:93189624-93189643 | None:intergenic | 45.0% |
| ! | GAGGACAGAATTTTGCTCGT+TGG | - | chr3.3:93187978-93187997 | MS.gene69403:intron | 45.0% |
| ! | GCAGTACCAAAACTTTTGGG+CGG | - | chr3.3:93189490-93189509 | MS.gene69403:CDS | 45.0% |
| ! | GGATCACATTTTGCAGGCAT+CGG | + | chr3.3:93188793-93188812 | None:intergenic | 45.0% |
| ! | TGGGAGTGCAGATAATTTGG+TGG | - | chr3.3:93187534-93187553 | MS.gene69403:CDS | 45.0% |
| !! | GCACTCCACATTTTGATCCT+TGG | + | chr3.3:93188615-93188634 | None:intergenic | 45.0% |
| !! | GTTGAGGTATGCTGATTTGG+TGG | + | chr3.3:93189085-93189104 | None:intergenic | 45.0% |
| !! | TGCTGATTTGGTGGAGTTGT+AGG | + | chr3.3:93189076-93189095 | None:intergenic | 45.0% |
| !!! | TTTTTTAAATTATGAAAAAA+AGG | - | chr3.3:93186852-93186871 | MS.gene69403:intron | 5.0% |
| AAAGCGACAAGGGAAAGAGG+GGG | + | chr3.3:93186414-93186433 | None:intergenic | 50.0% | |
| AACCTGCCCCACCAAGAAAA+AGG | - | chr3.3:93189287-93189306 | MS.gene69403:intron | 50.0% | |
| ACCTGCCCCACCAAGAAAAA+GGG | - | chr3.3:93189288-93189307 | MS.gene69403:intron | 50.0% | |
| AGCATGAGGAAGAGGAGACA+AGG | + | chr3.3:93188861-93188880 | None:intergenic | 50.0% | |
| CAAGCTAGCGCTAGTATGAC+CGG | - | chr3.3:93187864-93187883 | MS.gene69403:intron | 50.0% | |
| CACCAAACCAGAGTACACCA+AGG | - | chr3.3:93188595-93188614 | MS.gene69403:CDS | 50.0% | |
| CATGAGGAAGAGGAGACAAG+GGG | + | chr3.3:93188859-93188878 | None:intergenic | 50.0% | |
| CGCAACTAGTAGCACAAGGT+GGG | - | chr3.3:93189513-93189532 | MS.gene69403:CDS | 50.0% | |
| CGGTCTATACAACAGCAGCA+TGG | - | chr3.3:93189037-93189056 | MS.gene69403:intron | 50.0% | |
| GAAAGCGACAAGGGAAAGAG+GGG | + | chr3.3:93186415-93186434 | None:intergenic | 50.0% | |
| GAGACTCTCTATGCTTTGGC+TGG | - | chr3.3:93187187-93187206 | MS.gene69403:intron | 50.0% | |
| GCATGAGGAAGAGGAGACAA+GGG | + | chr3.3:93188860-93188879 | None:intergenic | 50.0% | |
| GCATTGGAACCACCATTGGT+AGG | + | chr3.3:93187220-93187239 | None:intergenic | 50.0% | |
| GCTCCCATAGACGAACTTTC+AGG | + | chr3.3:93187463-93187482 | None:intergenic | 50.0% | |
| GTCCTTGTCCTTGTCCTTGT+CGG | - | chr3.3:93188922-93188941 | MS.gene69403:intron | 50.0% | |
| TGAAGGGGGTGGAGGAAATT+AGG | + | chr3.3:93188205-93188224 | None:intergenic | 50.0% | |
| TGAGCTGCACAACTCTTCCA+TGG | + | chr3.3:93188496-93188515 | None:intergenic | 50.0% | |
| ! | CAACTTACGTTTCAGGTCGG+AGG | - | chr3.3:93187899-93187918 | MS.gene69403:intron | 50.0% |
| ! | CAGCCAATGTGGAGCTTTAG+CGG | + | chr3.3:93188278-93188297 | None:intergenic | 50.0% |
| ! | CTCAGCATTGGAACCACCAT+TGG | + | chr3.3:93187224-93187243 | None:intergenic | 50.0% |
| !!! | TCACATTTTGCAGGCATCGG+AGG | + | chr3.3:93188790-93188809 | None:intergenic | 50.0% |
| AAAACCTGTGGTCCTGCAGC+AGG | + | chr3.3:93189127-93189146 | None:intergenic | 55.0% | |
| AGCAGAAATGAAGGGGGTGG+AGG | + | chr3.3:93188213-93188232 | None:intergenic | 55.0% | |
| AGCCGACAAGGACAAGGACA+AGG | + | chr3.3:93188927-93188946 | None:intergenic | 55.0% | |
| AGCGATGCAAGGGAATGGTG+AGG | + | chr3.3:93189638-93189657 | None:intergenic | 55.0% | |
| ATTGACCAGCTTCCTGCTGC+AGG | - | chr3.3:93189112-93189131 | MS.gene69403:CDS | 55.0% | |
| CTAGTAGCACAAGGTGGGTC+TGG | - | chr3.3:93189518-93189537 | MS.gene69403:CDS | 55.0% | |
| CTGCCGCTAAAGCTCCACAT+TGG | - | chr3.3:93188272-93188291 | MS.gene69403:CDS | 55.0% | |
| GCGCAACTAGTAGCACAAGG+TGG | - | chr3.3:93189512-93189531 | MS.gene69403:CDS | 55.0% | |
| TCTGCAGGGTGTGCCTATGA+TGG | - | chr3.3:93187585-93187604 | MS.gene69403:intron | 55.0% | |
| TTGTCCTTGTCCTTGTCGGC+TGG | - | chr3.3:93188926-93188945 | MS.gene69403:intron | 55.0% | |
| ! | GTTGCGCCGCCCAAAAGTTT+TGG | + | chr3.3:93189499-93189518 | None:intergenic | 55.0% |
| ! | TCCCTTTTTCTTGGTGGGGC+AGG | + | chr3.3:93189292-93189311 | None:intergenic | 55.0% |
| ! | TCCTTGTCGGCTGGAGGTAA+CGG | - | chr3.3:93188935-93188954 | MS.gene69403:intron | 55.0% |
| !! | GGCTGGAGGTAACGGGTTAA+AGG | - | chr3.3:93188943-93188962 | MS.gene69403:intron | 55.0% |
| ACCTCCAGCCGACAAGGACA+AGG | + | chr3.3:93188933-93188952 | None:intergenic | 60.0% | |
| GATGCACTCTGTGTCGAGCC+TGG | + | chr3.3:93188112-93188131 | None:intergenic | 60.0% | |
| GCGGCGCAACTAGTAGCACA+AGG | - | chr3.3:93189509-93189528 | MS.gene69403:CDS | 60.0% | |
| ! | CCTTGTCGGCTGGAGGTAAC+GGG | - | chr3.3:93188936-93188955 | MS.gene69403:intron | 60.0% |
| ! | TCCTTGTCCTTGTCGGCTGG+AGG | - | chr3.3:93188929-93188948 | MS.gene69403:intron | 60.0% |
| CCCGTTACCTCCAGCCGACA+AGG | + | chr3.3:93188939-93188958 | None:intergenic | 65.0% | |
| GCTTCCTGCTGCAGGACCAC+AGG | - | chr3.3:93189120-93189139 | MS.gene69403:CDS | 65.0% | |
| GTGGTCCTGCAGCAGGAAGC+TGG | + | chr3.3:93189120-93189139 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 93186327 | 93189739 | 93186327 | ID=MS.gene69403 |
| chr3.3 | mRNA | 93186327 | 93189739 | 93186327 | ID=MS.gene69403.t1;Parent=MS.gene69403 |
| chr3.3 | exon | 93189670 | 93189739 | 93189670 | ID=MS.gene69403.t1.exon1;Parent=MS.gene69403.t1 |
| chr3.3 | CDS | 93189670 | 93189739 | 93189670 | ID=cds.MS.gene69403.t1;Parent=MS.gene69403.t1 |
| chr3.3 | exon | 93189454 | 93189572 | 93189454 | ID=MS.gene69403.t1.exon2;Parent=MS.gene69403.t1 |
| chr3.3 | CDS | 93189454 | 93189572 | 93189454 | ID=cds.MS.gene69403.t1;Parent=MS.gene69403.t1 |
| chr3.3 | exon | 93189297 | 93189354 | 93189297 | ID=MS.gene69403.t1.exon3;Parent=MS.gene69403.t1 |
| chr3.3 | CDS | 93189297 | 93189354 | 93189297 | ID=cds.MS.gene69403.t1;Parent=MS.gene69403.t1 |
| chr3.3 | exon | 93189039 | 93189145 | 93189039 | ID=MS.gene69403.t1.exon4;Parent=MS.gene69403.t1 |
| chr3.3 | CDS | 93189039 | 93189145 | 93189039 | ID=cds.MS.gene69403.t1;Parent=MS.gene69403.t1 |
| chr3.3 | exon | 93188756 | 93188927 | 93188756 | ID=MS.gene69403.t1.exon5;Parent=MS.gene69403.t1 |
| chr3.3 | CDS | 93188756 | 93188927 | 93188756 | ID=cds.MS.gene69403.t1;Parent=MS.gene69403.t1 |
| chr3.3 | exon | 93188398 | 93188638 | 93188398 | ID=MS.gene69403.t1.exon6;Parent=MS.gene69403.t1 |
| chr3.3 | CDS | 93188398 | 93188638 | 93188398 | ID=cds.MS.gene69403.t1;Parent=MS.gene69403.t1 |
| chr3.3 | exon | 93188250 | 93188316 | 93188250 | ID=MS.gene69403.t1.exon7;Parent=MS.gene69403.t1 |
| chr3.3 | CDS | 93188250 | 93188316 | 93188250 | ID=cds.MS.gene69403.t1;Parent=MS.gene69403.t1 |
| chr3.3 | exon | 93188095 | 93188152 | 93188095 | ID=MS.gene69403.t1.exon8;Parent=MS.gene69403.t1 |
| chr3.3 | CDS | 93188095 | 93188152 | 93188095 | ID=cds.MS.gene69403.t1;Parent=MS.gene69403.t1 |
| chr3.3 | exon | 93187908 | 93187974 | 93187908 | ID=MS.gene69403.t1.exon9;Parent=MS.gene69403.t1 |
| chr3.3 | CDS | 93187908 | 93187974 | 93187908 | ID=cds.MS.gene69403.t1;Parent=MS.gene69403.t1 |
| chr3.3 | exon | 93187709 | 93187802 | 93187709 | ID=MS.gene69403.t1.exon10;Parent=MS.gene69403.t1 |
| chr3.3 | CDS | 93187709 | 93187802 | 93187709 | ID=cds.MS.gene69403.t1;Parent=MS.gene69403.t1 |
| chr3.3 | exon | 93187244 | 93187600 | 93187244 | ID=MS.gene69403.t1.exon11;Parent=MS.gene69403.t1 |
| chr3.3 | CDS | 93187244 | 93187600 | 93187244 | ID=cds.MS.gene69403.t1;Parent=MS.gene69403.t1 |
| chr3.3 | exon | 93186925 | 93187158 | 93186925 | ID=MS.gene69403.t1.exon12;Parent=MS.gene69403.t1 |
| chr3.3 | CDS | 93186925 | 93187158 | 93186925 | ID=cds.MS.gene69403.t1;Parent=MS.gene69403.t1 |
| chr3.3 | exon | 93186327 | 93186653 | 93186327 | ID=MS.gene69403.t1.exon13;Parent=MS.gene69403.t1 |
| chr3.3 | CDS | 93186327 | 93186653 | 93186327 | ID=cds.MS.gene69403.t1;Parent=MS.gene69403.t1 |
| Gene Sequence |
| Protein sequence |
