Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69543.t1 | RHN66852.1 | 87.5 | 1927 | 182 | 10 | 3 | 1902 | 14 | 1908 | 0.00E+00 | 3279.2 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69543.t1 | Q9SHJ3 | 64.0 | 1939 | 616 | 19 | 5 | 1896 | 23 | 1925 | 0.0e+00 | 2404.0 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69543.t1 | A0A396IMR2 | 87.5 | 1927 | 182 | 10 | 3 | 1902 | 14 | 1908 | 0.0e+00 | 3279.2 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene056169 | MS.gene69543 | 0.800156 | 1.65E-48 | -1.69E-46 |
MS.gene05894 | MS.gene69543 | 0.817581 | 3.06E-52 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69543.t1 | MTR_3g047390 | 87.494 | 1927 | 182 | 10 | 3 | 1902 | 14 | 1908 | 0.0 | 3396 |
MS.gene69543.t1 | MTR_7g005950 | 52.576 | 1980 | 771 | 30 | 25 | 1896 | 30 | 1949 | 0.0 | 2022 |
MS.gene69543.t1 | MTR_3g096200 | 52.187 | 1966 | 811 | 34 | 10 | 1896 | 11 | 1926 | 0.0 | 1989 |
MS.gene69543.t1 | MTR_2g061380 | 51.427 | 1962 | 813 | 26 | 25 | 1896 | 27 | 1938 | 0.0 | 1976 |
MS.gene69543.t1 | MTR_8g093630 | 51.920 | 1953 | 808 | 29 | 27 | 1896 | 32 | 1936 | 0.0 | 1960 |
MS.gene69543.t1 | MTR_1g116370 | 52.298 | 1958 | 793 | 31 | 25 | 1897 | 33 | 1934 | 0.0 | 1959 |
MS.gene69543.t1 | MTR_7g005950 | 52.201 | 1908 | 744 | 30 | 25 | 1824 | 30 | 1877 | 0.0 | 1924 |
MS.gene69543.t1 | MTR_2g072160 | 47.023 | 1948 | 894 | 37 | 29 | 1900 | 64 | 1949 | 0.0 | 1729 |
MS.gene69543.t1 | MTR_3g075180 | 44.290 | 1944 | 932 | 39 | 33 | 1901 | 41 | 1908 | 0.0 | 1563 |
MS.gene69543.t1 | MTR_1g116470 | 43.013 | 1925 | 963 | 37 | 33 | 1894 | 37 | 1890 | 0.0 | 1467 |
MS.gene69543.t1 | MTR_3g075180 | 43.310 | 1891 | 915 | 41 | 33 | 1842 | 41 | 1855 | 0.0 | 1467 |
MS.gene69543.t1 | MTR_1g116470 | 42.872 | 1936 | 955 | 39 | 33 | 1894 | 37 | 1895 | 0.0 | 1459 |
MS.gene69543.t1 | MTR_4g078220 | 43.085 | 1815 | 866 | 26 | 178 | 1896 | 17 | 1760 | 0.0 | 1444 |
MS.gene69543.t1 | MTR_2g090375 | 42.079 | 1818 | 832 | 35 | 180 | 1897 | 14 | 1710 | 0.0 | 1367 |
MS.gene69543.t1 | MTR_2g013580 | 41.868 | 1820 | 880 | 32 | 180 | 1896 | 29 | 1773 | 0.0 | 1362 |
MS.gene69543.t1 | MTR_8g093630 | 46.198 | 1394 | 620 | 30 | 27 | 1338 | 32 | 1377 | 0.0 | 1154 |
MS.gene69543.t1 | MTR_1g101740 | 77.327 | 419 | 61 | 6 | 1494 | 1902 | 1 | 395 | 0.0 | 608 |
MS.gene69543.t1 | MTR_1g101710 | 61.044 | 249 | 10 | 3 | 91 | 339 | 15 | 176 | 5.57e-84 | 273 |
MS.gene69543.t1 | MTR_1g101735 | 87.805 | 123 | 14 | 1 | 1364 | 1485 | 16 | 138 | 9.07e-70 | 230 |
MS.gene69543.t1 | MTR_1g101690 | 87.234 | 94 | 12 | 0 | 1 | 94 | 1 | 94 | 1.46e-49 | 171 |
MS.gene69543.t1 | MTR_7g027890 | 46.269 | 134 | 69 | 1 | 26 | 156 | 31 | 164 | 3.00e-30 | 119 |
MS.gene69543.t1 | MTR_7g006330 | 41.912 | 136 | 72 | 3 | 25 | 153 | 9 | 144 | 2.51e-23 | 99.0 |
MS.gene69543.t1 | MTR_1g018820 | 46.154 | 65 | 35 | 0 | 433 | 497 | 14 | 78 | 3.06e-13 | 67.8 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69543.t1 | AT1G06490 | 63.885 | 1941 | 614 | 21 | 5 | 1896 | 23 | 1925 | 0.0 | 2491 |
MS.gene69543.t1 | AT1G06490 | 63.885 | 1941 | 614 | 21 | 5 | 1896 | 23 | 1925 | 0.0 | 2487 |
MS.gene69543.t1 | AT3G59100 | 63.399 | 1918 | 624 | 20 | 22 | 1896 | 31 | 1913 | 0.0 | 2467 |
MS.gene69543.t1 | AT3G59100 | 65.721 | 1622 | 508 | 14 | 317 | 1896 | 1 | 1616 | 0.0 | 2180 |
MS.gene69543.t1 | AT5G13000 | 52.060 | 1990 | 802 | 31 | 3 | 1896 | 13 | 1946 | 0.0 | 2001 |
MS.gene69543.t1 | AT1G05570 | 52.008 | 1967 | 797 | 29 | 25 | 1896 | 27 | 1941 | 0.0 | 1979 |
MS.gene69543.t1 | AT1G05570 | 52.008 | 1967 | 797 | 29 | 25 | 1896 | 27 | 1941 | 0.0 | 1979 |
MS.gene69543.t1 | AT1G05570 | 52.008 | 1967 | 797 | 29 | 25 | 1896 | 27 | 1941 | 0.0 | 1979 |
MS.gene69543.t1 | AT2G31960 | 51.401 | 1963 | 815 | 29 | 25 | 1896 | 27 | 1941 | 0.0 | 1974 |
MS.gene69543.t1 | AT2G31960 | 51.401 | 1963 | 815 | 29 | 25 | 1896 | 27 | 1941 | 0.0 | 1974 |
MS.gene69543.t1 | AT2G31960 | 51.401 | 1963 | 815 | 29 | 25 | 1896 | 27 | 1941 | 0.0 | 1974 |
MS.gene69543.t1 | AT2G31960 | 51.401 | 1963 | 815 | 29 | 25 | 1896 | 27 | 1941 | 0.0 | 1974 |
MS.gene69543.t1 | AT2G13680 | 52.194 | 1960 | 820 | 33 | 5 | 1896 | 10 | 1920 | 0.0 | 1966 |
MS.gene69543.t1 | AT1G05570 | 51.611 | 1955 | 782 | 29 | 25 | 1896 | 27 | 1900 | 0.0 | 1945 |
MS.gene69543.t1 | AT2G31960 | 50.897 | 1951 | 802 | 29 | 25 | 1896 | 27 | 1900 | 0.0 | 1934 |
MS.gene69543.t1 | AT5G13000 | 51.186 | 1981 | 792 | 33 | 3 | 1896 | 13 | 1905 | 0.0 | 1927 |
MS.gene69543.t1 | AT3G14570 | 48.746 | 1953 | 859 | 32 | 29 | 1896 | 52 | 1947 | 0.0 | 1820 |
MS.gene69543.t1 | AT3G14570 | 48.178 | 1976 | 862 | 31 | 29 | 1896 | 52 | 1973 | 0.0 | 1812 |
MS.gene69543.t1 | AT3G14570 | 47.672 | 1976 | 856 | 32 | 29 | 1896 | 52 | 1957 | 0.0 | 1779 |
MS.gene69543.t1 | AT5G36870 | 49.481 | 1926 | 812 | 38 | 29 | 1896 | 32 | 1854 | 0.0 | 1755 |
MS.gene69543.t1 | AT5G36870 | 49.481 | 1926 | 812 | 38 | 29 | 1896 | 32 | 1854 | 0.0 | 1755 |
MS.gene69543.t1 | AT5G36870 | 48.610 | 1942 | 820 | 37 | 29 | 1896 | 24 | 1861 | 0.0 | 1729 |
MS.gene69543.t1 | AT5G36870 | 48.585 | 1943 | 820 | 38 | 29 | 1896 | 24 | 1862 | 0.0 | 1724 |
MS.gene69543.t1 | AT5G36870 | 50.115 | 1736 | 706 | 37 | 29 | 1707 | 32 | 1664 | 0.0 | 1582 |
MS.gene69543.t1 | AT2G36850 | 42.864 | 1948 | 952 | 36 | 33 | 1901 | 39 | 1904 | 0.0 | 1515 |
MS.gene69543.t1 | AT3G07160 | 42.790 | 1928 | 977 | 40 | 23 | 1894 | 28 | 1885 | 0.0 | 1466 |
MS.gene69543.t1 | AT3G07160 | 42.790 | 1928 | 977 | 40 | 23 | 1894 | 28 | 1885 | 0.0 | 1466 |
MS.gene69543.t1 | AT3G07160 | 42.842 | 1928 | 974 | 40 | 23 | 1894 | 28 | 1883 | 0.0 | 1466 |
MS.gene69543.t1 | AT4G03550 | 42.276 | 1819 | 881 | 27 | 178 | 1896 | 26 | 1775 | 0.0 | 1434 |
MS.gene69543.t1 | AT4G04970 | 43.538 | 1826 | 851 | 34 | 178 | 1898 | 18 | 1768 | 0.0 | 1400 |
MS.gene69543.t1 | AT3G14780 | 40.972 | 144 | 73 | 4 | 29 | 160 | 48 | 191 | 1.53e-20 | 95.9 |
Find 389 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
TTGCACTTTATCTTCTAATA+TGG | 0.129433 | 3.1:+33689617 | MS.gene69543:CDS |
CTCTGACATTTAAGTATTTC+AGG | 0.145100 | 3.1:-33700723 | None:intergenic |
GGCTGCGGGCTTCAATATTT+TGG | 0.147796 | 3.1:-33695398 | None:intergenic |
CGTCCGAACTTCAACAAAAT+TGG | 0.185451 | 3.1:-33691482 | None:intergenic |
CCCTGGCCAACATACAATTT+TGG | 0.187561 | 3.1:-33692723 | None:intergenic |
TGGAGTAACTTTGGACTTAT+TGG | 0.189885 | 3.1:+33691709 | MS.gene69543:CDS |
GGACCCAGTCAATTTATTAT+TGG | 0.206802 | 3.1:+33692494 | MS.gene69543:CDS |
TAAATATAATGGCATGATTT+TGG | 0.207169 | 3.1:-33697221 | None:intergenic |
CTTCCCATCCTTATGGAAAT+TGG | 0.207588 | 3.1:+33700208 | MS.gene69543:CDS |
AGTAGTGCAGCCACTATATT+TGG | 0.210308 | 3.1:-33692538 | None:intergenic |
CCATTCTTGTTCAATCCTTC+TGG | 0.213179 | 3.1:+33700577 | MS.gene69543:CDS |
TATAATCCTTATCGTCTTAA+AGG | 0.213616 | 3.1:+33700960 | MS.gene69543:CDS |
TATCATCACGCGTTACTATT+TGG | 0.217990 | 3.1:-33689872 | None:intergenic |
AAAATTGGGACTTACTTTAA+AGG | 0.218639 | 3.1:-33697673 | None:intergenic |
TCACAACTCACCAAGATAAT+TGG | 0.225466 | 3.1:-33693440 | None:intergenic |
ACTTTGTTTGGTGGGATTAT+TGG | 0.227070 | 3.1:+33693601 | MS.gene69543:CDS |
TGCACTTTCTTGGGTAGTTT+TGG | 0.234772 | 3.1:+33700936 | MS.gene69543:CDS |
CTTAGGTATTTGCACTTTCT+TGG | 0.236335 | 3.1:+33700926 | MS.gene69543:intron |
TTTCATTTCTTTAGGTTATT+AGG | 0.237005 | 3.1:+33695331 | MS.gene69543:intron |
GCAAAGGAAACCTACTATAT+TGG | 0.247695 | 3.1:+33697446 | MS.gene69543:CDS |
TCCCAGCTGCAGTGCTGGTT+TGG | 0.252251 | 3.1:-33691444 | None:intergenic |
ACCAAACAAAGTGGCATAAA+TGG | 0.261554 | 3.1:-33693590 | None:intergenic |
TCTTGAAGTGGGCGAAACTA+TGG | 0.264311 | 3.1:+33701571 | MS.gene69543:CDS |
CTGCAGTGCTGGTTTGGCCT+CGG | 0.268752 | 3.1:-33691438 | None:intergenic |
TTCTATGCATTCTTCAACTT+TGG | 0.270741 | 3.1:-33694764 | None:intergenic |
TAAGTGTTGTCATTTCAATA+TGG | 0.272014 | 3.1:+33693414 | MS.gene69543:CDS |
CGTTTCTTTATCTATCAATA+TGG | 0.272724 | 3.1:+33700775 | MS.gene69543:CDS |
CTCTGGATGGGCCATTATTC+TGG | 0.278584 | 3.1:+33701359 | MS.gene69543:CDS |
GGAACGAAAGCTCATTATTA+TGG | 0.283755 | 3.1:+33700316 | MS.gene69543:CDS |
CTTTGGCATATTCATAAATA+AGG | 0.283759 | 3.1:-33695442 | None:intergenic |
ATTCGAAATGGCTTATAAAA+TGG | 0.283952 | 3.1:+33686677 | MS.gene69543:CDS |
GATTTCACTCTTCGAGTCTA+AGG | 0.284135 | 3.1:+33699511 | MS.gene69543:CDS |
TGGTCGCAAAGCTGCTTTCC+TGG | 0.286950 | 3.1:-33697627 | None:intergenic |
CTCAAGGCACTTCTGTTTAT+CGG | 0.289335 | 3.1:+33701252 | MS.gene69543:CDS |
TGCTACGATGAGCAATATTC+AGG | 0.290319 | 3.1:-33700810 | None:intergenic |
CCTGGTCCTCCTACGGAAAT+TGG | 0.292707 | 3.1:+33697180 | MS.gene69543:CDS |
GACCATTGGCCAACGAGTTT+TGG | 0.294526 | 3.1:+33697645 | MS.gene69543:CDS |
CCTCTTCTGGATCATGATTC+TGG | 0.296122 | 3.1:+33693002 | MS.gene69543:CDS |
GAAGAAATTCTTATCTCTAT+TGG | 0.300220 | 3.1:+33694846 | MS.gene69543:CDS |
TATTGGAGCCTTCAGCCATT+TGG | 0.300899 | 3.1:+33693618 | MS.gene69543:CDS |
GGACGTATTTGCATCTTTAT+AGG | 0.301263 | 3.1:+33691500 | MS.gene69543:CDS |
GACCCAGTCAATTTATTATT+GGG | 0.302376 | 3.1:+33692495 | MS.gene69543:CDS |
GCCATTTATGCCACTTTGTT+TGG | 0.302426 | 3.1:+33693589 | MS.gene69543:CDS |
TTCTCTTCTCGTAGAAATAT+TGG | 0.303247 | 3.1:-33687953 | None:intergenic |
GAAGAATTTCATGCACATAA+AGG | 0.304098 | 3.1:+33697423 | MS.gene69543:CDS |
TTCAGGATATGTTGTCCTTT+AGG | 0.304280 | 3.1:+33695475 | MS.gene69543:CDS |
TTGGCAGGTACACCCTCTTC+TGG | 0.306729 | 3.1:+33692989 | MS.gene69543:intron |
CTTCTTCCCAGCTGCAGTGC+TGG | 0.315683 | 3.1:-33691449 | None:intergenic |
CAAAGGAAACCTACTATATT+GGG | 0.315993 | 3.1:+33697447 | MS.gene69543:CDS |
TTAAGAGAGCATATATTTAC+TGG | 0.317583 | 3.1:+33697471 | MS.gene69543:CDS |
GTGAAAATCTTGAAGAAGAT+AGG | 0.317983 | 3.1:+33695967 | MS.gene69543:CDS |
CCCTTTCGAGTTTGTGCAAC+AGG | 0.319424 | 3.1:-33686743 | None:intergenic |
GATTGAAGAGCAACCGGGTT+TGG | 0.323478 | 3.1:-33701695 | None:intergenic |
GGAAATTAAGAGCCGATCTT+TGG | 0.327755 | 3.1:-33700507 | None:intergenic |
TGCACTTTATCTTCTAATAT+GGG | 0.330097 | 3.1:+33689618 | MS.gene69543:CDS |
AAAATATAGCAAAGACATTC+AGG | 0.332666 | 3.1:-33689667 | None:intergenic |
CAGATTTCAATGATTCTTGC+TGG | 0.337053 | 3.1:+33701738 | MS.gene69543:CDS |
CATCCTTATGGAAATTGGTT+TGG | 0.337406 | 3.1:+33700213 | MS.gene69543:CDS |
TCCTGAACTTTAGGAGCCTT+TGG | 0.337562 | 3.1:-33695459 | None:intergenic |
AGGCTATGATTATAATTTCA+TGG | 0.339863 | 3.1:+33691689 | MS.gene69543:intron |
TTGGTTTGGAGAAGGGATTT+TGG | 0.341369 | 3.1:+33700227 | MS.gene69543:CDS |
GCAGGTGCTTCCCATCCTTA+TGG | 0.343567 | 3.1:+33700201 | MS.gene69543:CDS |
AGTTTGTGGTAGCAGTAGTT+TGG | 0.345696 | 3.1:+33692413 | MS.gene69543:CDS |
TTGCATACTTCTCTCAGGTT+TGG | 0.346957 | 3.1:+33694002 | MS.gene69543:CDS |
GTAGTAACTCTCTAGCTCTT+TGG | 0.352514 | 3.1:-33687931 | None:intergenic |
TTCTCCACGGGTAAATATAA+TGG | 0.356567 | 3.1:-33697232 | None:intergenic |
ATTGGAGCCTTCAGCCATTT+GGG | 0.357774 | 3.1:+33693619 | MS.gene69543:CDS |
AATTAAGTGTTACCATTCTC+TGG | 0.357824 | 3.1:-33693306 | None:intergenic |
TCCATGGGTAAACGAAGATT+TGG | 0.358263 | 3.1:+33701201 | MS.gene69543:CDS |
TGCAGTGCTGGTTTGGCCTC+GGG | 0.360651 | 3.1:-33691437 | None:intergenic |
GACAACATATCCTGAACTTT+AGG | 0.361982 | 3.1:-33695468 | None:intergenic |
GCTAGGTCCACAAAATATTC+AGG | 0.364206 | 3.1:+33688160 | MS.gene69543:CDS |
TTAGGTATTTGCACTTTCTT+GGG | 0.366212 | 3.1:+33700927 | MS.gene69543:intron |
AAGAGCATACGAATATATAA+TGG | 0.369665 | 3.1:+33701614 | MS.gene69543:CDS |
CTGATAAAAGCTGGGAATCT+TGG | 0.370854 | 3.1:+33700680 | MS.gene69543:CDS |
AAGAATTTCATGCACATAAA+GGG | 0.373074 | 3.1:+33697424 | MS.gene69543:CDS |
AAGTGTTGTCATTTCAATAT+GGG | 0.373323 | 3.1:+33693415 | MS.gene69543:CDS |
CATGATTCTGGTTAGCAAAC+TGG | 0.376277 | 3.1:+33693014 | MS.gene69543:CDS |
AAATTTGAGTAGAGATTCAT+TGG | 0.378600 | 3.1:-33690252 | None:intergenic |
CTTGAGTGAATGATAGGAAT+TGG | 0.380962 | 3.1:-33688721 | None:intergenic |
AATTTAGCTTACCAGAATAA+TGG | 0.381463 | 3.1:-33701370 | None:intergenic |
AGAATCCAACTGGGGACTTC+GGG | 0.382501 | 3.1:+33692473 | MS.gene69543:CDS |
ACAGTGTATGTGTTCTTATA+CGG | 0.382602 | 3.1:+33700058 | MS.gene69543:CDS |
CATCAGTACCTCATAGAAAA+TGG | 0.383361 | 3.1:+33696200 | MS.gene69543:CDS |
GTAGTTTCTTGTCAACTGTA+TGG | 0.384165 | 3.1:+33696435 | MS.gene69543:CDS |
TCAATCCTTCTGGCTTTGAT+TGG | 0.385805 | 3.1:+33700587 | MS.gene69543:CDS |
TGCCTTCATGCCCTCTGGAT+GGG | 0.386209 | 3.1:+33701347 | MS.gene69543:CDS |
GCCAAAGGCTCCTAAAGTTC+AGG | 0.387815 | 3.1:+33695458 | MS.gene69543:CDS |
TGAACATTCTCTTTGTAATA+CGG | 0.390338 | 3.1:-33695745 | None:intergenic |
GCCAAAATTGTATGTTGGCC+AGG | 0.391216 | 3.1:+33692722 | MS.gene69543:intron |
AAGATTCTGTCAAATATATC+TGG | 0.391667 | 3.1:-33699259 | None:intergenic |
CACCAGGATATATCTTTGTT+AGG | 0.391674 | 3.1:-33695825 | None:intergenic |
GGCCAAACCAGCACTGCAGC+TGG | 0.391762 | 3.1:+33691442 | MS.gene69543:CDS |
AATTATCATCAAGGATGTTA+TGG | 0.391764 | 3.1:+33695021 | MS.gene69543:CDS |
ATGCTTGATTGAAGAGCAAC+CGG | 0.393609 | 3.1:-33701701 | None:intergenic |
AATATGGGCTCCAATTATCT+TGG | 0.393759 | 3.1:+33693430 | MS.gene69543:CDS |
GATGAAACAAACGACGAATC+AGG | 0.394229 | 3.1:+33696654 | MS.gene69543:CDS |
TGCCGTGATGTTTATCGTCT+TGG | 0.395388 | 3.1:+33699563 | MS.gene69543:CDS |
TTTCAAAATGAGAAATGTAT+TGG | 0.396842 | 3.1:+33697401 | MS.gene69543:CDS |
TTCTTGAACAAGCGAAAGCT+TGG | 0.398669 | 3.1:+33696391 | MS.gene69543:CDS |
CGAAGAGTGAAATCTGATTC+AGG | 0.399396 | 3.1:-33699502 | None:intergenic |
TGCTTTGCTTATGCCACCTC+TGG | 0.399453 | 3.1:-33699290 | None:intergenic |
TGTTGGCAAGCAATAGTATA+AGG | 0.401293 | 3.1:-33688993 | None:intergenic |
TTGCCTTCATGCCCTCTGGA+TGG | 0.402134 | 3.1:+33701346 | MS.gene69543:CDS |
ATAATTTCATGGAGTAACTT+TGG | 0.405434 | 3.1:+33691700 | MS.gene69543:CDS |
TGTTGGCAAGTAATAGTATA+AGG | 0.408246 | 3.1:-33689194 | None:intergenic |
TGCGTTGTAAATCAAATATT+AGG | 0.409028 | 3.1:+33689458 | MS.gene69543:CDS |
ATATATCGCATCAAGCTTCC+TGG | 0.409404 | 3.1:+33697162 | MS.gene69543:CDS |
ACATGTCATCGGTGTTGAAC+CGG | 0.410863 | 3.1:+33688511 | MS.gene69543:CDS |
GTTTGTGGTAGCAGTAGTTT+GGG | 0.413631 | 3.1:+33692414 | MS.gene69543:CDS |
TCCATTCTTGCTTGCTAGCA+AGG | 0.415243 | 3.1:+33694226 | MS.gene69543:CDS |
GTTTGGAACTCCGACACAAA+TGG | 0.415586 | 3.1:-33701678 | None:intergenic |
TTTCATTGTAATCCACTGTC+TGG | 0.418499 | 3.1:-33696356 | None:intergenic |
AGGAAGACCTCATCAGTAAC+AGG | 0.419669 | 3.1:+33694050 | MS.gene69543:CDS |
GCAGTGTTTCATCACTTGCT+TGG | 0.420092 | 3.1:+33697593 | MS.gene69543:intron |
CAACCCAATAATAAATTGAC+TGG | 0.420340 | 3.1:-33692498 | None:intergenic |
CACATACCTTTAAGACGATA+AGG | 0.421328 | 3.1:-33700966 | None:intergenic |
TCTCAGTCTGTTGTTCAGTT+AGG | 0.424164 | 3.1:+33700172 | MS.gene69543:CDS |
GTTCTTGCCTTCATGCCCTC+TGG | 0.424651 | 3.1:+33701342 | MS.gene69543:CDS |
TGGTTTCTATTTCAGTATCA+TGG | 0.426462 | 3.1:+33699634 | MS.gene69543:CDS |
TCAGGTCTTGAGTGAATGAT+AGG | 0.427047 | 3.1:-33688727 | None:intergenic |
ATGTAAATGATATACTTGAT+TGG | 0.427316 | 3.1:+33688788 | MS.gene69543:CDS |
ATGTGCAATGATGTACTCTT+TGG | 0.428177 | 3.1:+33689807 | MS.gene69543:CDS |
TCTCTTAAACCCAATATAGT+AGG | 0.431964 | 3.1:-33697456 | None:intergenic |
ATTTGTTGTGTGTGCGCTTA+CGG | 0.433826 | 3.1:+33701299 | MS.gene69543:CDS |
TAGAGCTGCTAGTGAGATTG+AGG | 0.434507 | 3.1:+33685681 | MS.gene69543:CDS |
ATGGGAAACCGTGGTGGTAT+TGG | 0.434941 | 3.1:+33700649 | MS.gene69543:CDS |
AACTCATCAACGGTCCATCT+TGG | 0.435431 | 3.1:-33685589 | None:intergenic |
ACAGAAGTGCCTTGAGAATA+CGG | 0.435604 | 3.1:-33701245 | None:intergenic |
TTATATGATTCCAAATATAG+TGG | 0.436073 | 3.1:+33692528 | MS.gene69543:CDS |
ATTGTAGAACCATCATTATC+AGG | 0.437197 | 3.1:-33688745 | None:intergenic |
GAAACATCAATTGAACTGTA+TGG | 0.439615 | 3.1:-33694188 | None:intergenic |
GCAGACCATCGACATGAATC+AGG | 0.439900 | 3.1:+33697260 | MS.gene69543:CDS |
GGCTCTAAATATAGACCAAC+TGG | 0.440561 | 3.1:+33700358 | MS.gene69543:CDS |
AGATCTCTGAAGAATCCAAC+TGG | 0.441409 | 3.1:+33692463 | MS.gene69543:CDS |
ATTAATGCAATGCAGATGAA+TGG | 0.441643 | 3.1:+33695919 | MS.gene69543:intron |
TTCTGCTAGGTGCAGAAGAT+AGG | 0.441836 | 3.1:+33694619 | MS.gene69543:CDS |
TAATATTGCATACTTCTCTC+AGG | 0.444398 | 3.1:+33693997 | MS.gene69543:CDS |
TCAGATAGTCAATGTGCTGC+TGG | 0.445065 | 3.1:+33694988 | MS.gene69543:CDS |
TGCAGGGTCCGATTTCACTA+TGG | 0.445294 | 3.1:+33699235 | MS.gene69543:intron |
TCTAAGGTAGCAAGTGGAAA+TGG | 0.446636 | 3.1:+33699527 | MS.gene69543:CDS |
ATTTCTACGAGAAGAGAATC+CGG | 0.446906 | 3.1:+33687958 | MS.gene69543:CDS |
AAGAATCCAACTGGGGACTT+CGG | 0.448024 | 3.1:+33692472 | MS.gene69543:CDS |
AGAGCATACGAATATATAAT+GGG | 0.449339 | 3.1:+33701615 | MS.gene69543:CDS |
GCAGGATGATGCATATGAAC+GGG | 0.449976 | 3.1:+33693973 | MS.gene69543:intron |
TCGCTTTCATGCATTCGAAA+TGG | 0.450887 | 3.1:+33686665 | MS.gene69543:CDS |
TATCTGGACCATAGTGAAAT+CGG | 0.451075 | 3.1:-33699243 | None:intergenic |
TGGATTACAATGAAATAGAT+AGG | 0.459619 | 3.1:+33696364 | MS.gene69543:CDS |
TTCGCCATGTCCACAGCTAT+AGG | 0.459725 | 3.1:-33694483 | None:intergenic |
CTGAAATACTTAAATGTCAG+AGG | 0.460532 | 3.1:+33700724 | MS.gene69543:CDS |
TTGGGAAGTTTCATGATCTC+CGG | 0.462108 | 3.1:-33688530 | None:intergenic |
TGAAAATCTTGAAGAAGATA+GGG | 0.462138 | 3.1:+33695968 | MS.gene69543:CDS |
TTTATGCCACTTTGTTTGGT+GGG | 0.466096 | 3.1:+33693593 | MS.gene69543:CDS |
TCACAAAGATAAGCAACTCT+TGG | 0.466134 | 3.1:-33685712 | None:intergenic |
CCAATTTCCGTAGGAGGACC+AGG | 0.466395 | 3.1:-33697180 | None:intergenic |
TGAACCAACAAAATTGATCA+TGG | 0.466399 | 3.1:+33693245 | MS.gene69543:CDS |
CCAACACAGACATAAGGAAT+AGG | 0.466710 | 3.1:+33689211 | MS.gene69543:CDS |
TTTGGAACTCCGACACAAAT+GGG | 0.466979 | 3.1:-33701677 | None:intergenic |
TGAAATTTACTCAGTTGCTT+CGG | 0.472268 | 3.1:+33692380 | MS.gene69543:CDS |
GCAAGGCAAGTCATTCCAAC+TGG | 0.473017 | 3.1:+33690055 | MS.gene69543:CDS |
GTCAAAGAATTCAAGATGAG+CGG | 0.473128 | 3.1:+33694799 | MS.gene69543:CDS |
CAAACCAATTTCCATAAGGA+TGG | 0.473759 | 3.1:-33700212 | None:intergenic |
ACTTCTCTACAGTTTCTTCA+CGG | 0.473937 | 3.1:-33689390 | None:intergenic |
TGAGTACATACAAGTTGGTA+AGG | 0.475082 | 3.1:+33699466 | MS.gene69543:CDS |
TCTCCAAACCAATTTCCATA+AGG | 0.476212 | 3.1:-33700216 | None:intergenic |
TGGAGCAAATAACCAAGAAA+TGG | 0.476803 | 3.1:-33700557 | None:intergenic |
GGACAGACACTCTCTCGAAC+AGG | 0.476861 | 3.1:+33696023 | MS.gene69543:CDS |
AAAGAATATACAAGAGGAAT+CGG | 0.478367 | 3.1:+33693843 | MS.gene69543:CDS |
CCTGTTCCTTATGTCTATGT+TGG | 0.478399 | 3.1:-33689010 | None:intergenic |
GAAAGCAGCTTTGCGACCAT+TGG | 0.480189 | 3.1:+33697631 | MS.gene69543:CDS |
TGTGCAATGATGTACTCTTT+GGG | 0.480691 | 3.1:+33689808 | MS.gene69543:CDS |
CCAGAAGGATTGAACAAGAA+TGG | 0.480879 | 3.1:-33700577 | None:intergenic |
TGCATCCCTACTCACATCAT+TGG | 0.481769 | 3.1:-33689847 | None:intergenic |
CTCTGTTCTTGTCAAGGGAG+GGG | 0.482680 | 3.1:+33696692 | MS.gene69543:CDS |
TCTTGAACAAGCGAAAGCTT+GGG | 0.483900 | 3.1:+33696392 | MS.gene69543:CDS |
TTAAGCGAGGATATATTTGC+AGG | 0.484222 | 3.1:+33699328 | MS.gene69543:CDS |
ATCATTAAAACATCATATAG+TGG | 0.484288 | 3.1:-33689921 | None:intergenic |
GTATTCCATCTGATAAAAGC+TGG | 0.484580 | 3.1:+33700671 | MS.gene69543:CDS |
TCACTAGCAGCTCTAAGAAT+AGG | 0.485149 | 3.1:-33685673 | None:intergenic |
CTCAAAGAGGAAAATGAAGA+TGG | 0.485556 | 3.1:+33695784 | MS.gene69543:CDS |
ATCATCATAGTTTCTCCAGT+TGG | 0.487400 | 3.1:-33690070 | None:intergenic |
ATCGTGGTTCCCATTTGTGT+CGG | 0.488209 | 3.1:+33701668 | MS.gene69543:CDS |
AGAAACTGTAGAGAAGTTGA+TGG | 0.488332 | 3.1:+33689396 | MS.gene69543:CDS |
TGATGGTTCTACAATGCCTA+TGG | 0.488745 | 3.1:+33688753 | MS.gene69543:CDS |
CACGAAGTCTTTCCAGAGAA+TGG | 0.489394 | 3.1:+33693294 | MS.gene69543:CDS |
TGGGCATCAGATGGTTTCCA+TGG | 0.489553 | 3.1:+33701185 | MS.gene69543:intron |
ACATGCTCTCGTGCATTCCC+TGG | 0.491725 | 3.1:-33692740 | None:intergenic |
TATTGTTGAAATTATCATCA+AGG | 0.493483 | 3.1:+33695012 | MS.gene69543:CDS |
CCTATTCCTTATGTCTGTGT+TGG | 0.493838 | 3.1:-33689211 | None:intergenic |
ATGGAAATTGGTTTGGAGAA+GGG | 0.497442 | 3.1:+33700220 | MS.gene69543:CDS |
ACCTTGCTAGCAAGCAAGAA+TGG | 0.498009 | 3.1:-33694227 | None:intergenic |
CATGATGTGTAATATATCCT+TGG | 0.500702 | 3.1:-33699445 | None:intergenic |
ATGATTCTTGCTGGAAGGAA+AGG | 0.501242 | 3.1:+33701747 | MS.gene69543:CDS |
AGCCTTCAGCCATTTGGGTG+AGG | 0.501536 | 3.1:+33693624 | MS.gene69543:CDS |
CTTCAGCCAAAATTGTATGT+TGG | 0.506239 | 3.1:+33692717 | MS.gene69543:intron |
TGCTTGCCAACATAGACATA+AGG | 0.506625 | 3.1:+33689004 | MS.gene69543:CDS |
ATTTATGCCACTTTGTTTGG+TGG | 0.510069 | 3.1:+33693592 | MS.gene69543:CDS |
TTCAACTTCTCAATGAGTGA+AGG | 0.510398 | 3.1:-33694826 | None:intergenic |
CTGGAAAGACTTCGTGCCAC+TGG | 0.510849 | 3.1:-33693287 | None:intergenic |
TTAATGCAATGCAGATGAAT+GGG | 0.512317 | 3.1:+33695920 | MS.gene69543:intron |
CAAATCCCTCGAACAAGCCT+TGG | 0.512607 | 3.1:+33700147 | MS.gene69543:CDS |
TATGAGGTACTGATGGATCA+AGG | 0.512958 | 3.1:-33696192 | None:intergenic |
CTTGAAGTGGGCGAAACTAT+GGG | 0.513459 | 3.1:+33701572 | MS.gene69543:CDS |
TGAGACACAGACCACCAATC+AGG | 0.514384 | 3.1:+33690290 | MS.gene69543:CDS |
TATGGAAATTGGTTTGGAGA+AGG | 0.514444 | 3.1:+33700219 | MS.gene69543:CDS |
ATATTCTCAAGCTGATGCTC+AGG | 0.514787 | 3.1:+33696505 | MS.gene69543:CDS |
CAGAATAATGGCCCATCCAG+AGG | 0.515480 | 3.1:-33701358 | None:intergenic |
AAAATAGATATAGACCTGAT+TGG | 0.515644 | 3.1:-33690304 | None:intergenic |
TACCTAACAAAGATATATCC+TGG | 0.515950 | 3.1:+33695823 | MS.gene69543:CDS |
TCATTCTACTTCACCACAGT+TGG | 0.516071 | 3.1:+33699614 | MS.gene69543:CDS |
TACTTGCCAACACAGACATA+AGG | 0.516393 | 3.1:+33689205 | MS.gene69543:CDS |
GACAGATTGGAAGCGGTGGA+TGG | 0.516759 | 3.1:+33700630 | MS.gene69543:CDS |
ATGTTTATCGTCTTGGACGG+CGG | 0.517083 | 3.1:+33699570 | MS.gene69543:CDS |
TCCACAAAATATTCAGGAGA+AGG | 0.518057 | 3.1:+33688166 | MS.gene69543:CDS |
AAGGAAATGTGGCAAATCAA+AGG | 0.519125 | 3.1:+33688965 | MS.gene69543:CDS |
TCAATGTTAACAAACTCCTT+AGG | 0.519493 | 3.1:-33695181 | None:intergenic |
CTGTGGAAGACTGGACAGAT+TGG | 0.520651 | 3.1:+33700617 | MS.gene69543:CDS |
CCTTCACCAATTTCCGTAGG+AGG | 0.520914 | 3.1:-33697186 | None:intergenic |
AAATATAGACCAACTGGTCG+TGG | 0.522814 | 3.1:+33700364 | MS.gene69543:CDS |
TAATTTACCTCATTAGATGC+AGG | 0.523873 | 3.1:-33689033 | None:intergenic |
ATGAAACAAACGACGAATCA+GGG | 0.524504 | 3.1:+33696655 | MS.gene69543:CDS |
TATCGGCTTCTTGTCAGTAA+TGG | 0.526576 | 3.1:+33701269 | MS.gene69543:CDS |
GTTTATAAATTCTATGAGAG+AGG | 0.526728 | 3.1:+33694030 | MS.gene69543:CDS |
ACAATAGATGAAAGTGAAGA+AGG | 0.526927 | 3.1:-33685649 | None:intergenic |
AAGGAAACGTGGCAAATCAA+AGG | 0.527478 | 3.1:+33689166 | MS.gene69543:CDS |
GAGAGCATATATTTACTGGA+AGG | 0.528381 | 3.1:+33697475 | MS.gene69543:CDS |
CTATTACTCTGTTCTTGTCA+AGG | 0.529505 | 3.1:+33696686 | MS.gene69543:CDS |
ATCAAGGATGTTATGGTCGA+TGG | 0.529946 | 3.1:+33695028 | MS.gene69543:CDS |
GCCAAATCTTCGTTTACCCA+TGG | 0.530734 | 3.1:-33701202 | None:intergenic |
ACTCTGTTCTTGTCAAGGGA+GGG | 0.530874 | 3.1:+33696691 | MS.gene69543:CDS |
TATTACTCTGTTCTTGTCAA+GGG | 0.531883 | 3.1:+33696687 | MS.gene69543:CDS |
ACCTGTTGCACAAACTCGAA+AGG | 0.533313 | 3.1:+33686742 | MS.gene69543:CDS |
TGTTCAGTTAGGCTTACTGC+AGG | 0.534116 | 3.1:+33700183 | MS.gene69543:CDS |
TTTCAATGATTCTTGCTGGA+AGG | 0.534185 | 3.1:+33701742 | MS.gene69543:CDS |
ACGGAACTTGAGCTGAAAGT+TGG | 0.534833 | 3.1:-33701226 | None:intergenic |
CCAACATAGACATAAGGAAC+AGG | 0.535082 | 3.1:+33689010 | MS.gene69543:CDS |
CCTGTTGCACAAACTCGAAA+GGG | 0.536930 | 3.1:+33686743 | MS.gene69543:CDS |
AGGAAATGTGGCAAATCAAA+GGG | 0.537050 | 3.1:+33688966 | MS.gene69543:CDS |
GCAGATGTTGAGAATAAGAA+TGG | 0.538068 | 3.1:+33688458 | MS.gene69543:CDS |
TGCCAAAACTCGTTGGCCAA+TGG | 0.538145 | 3.1:-33697647 | None:intergenic |
AGGAAACGTGGCAAATCAAA+GGG | 0.539346 | 3.1:+33689167 | MS.gene69543:CDS |
TCAAAGAATTCAAGATGAGC+GGG | 0.540457 | 3.1:+33694800 | MS.gene69543:CDS |
AAAGAATGTAATACGGCTGC+GGG | 0.541591 | 3.1:-33695412 | None:intergenic |
CAAGCAAGAATGGAGGCCAC+TGG | 0.543489 | 3.1:-33694217 | None:intergenic |
CTACGCATACCTCACCCAAA+TGG | 0.543863 | 3.1:-33693633 | None:intergenic |
GCACTTTATCTTCTAATATG+GGG | 0.544078 | 3.1:+33689619 | MS.gene69543:CDS |
TACAGAGAAGAGATCAGTGA+TGG | 0.544193 | 3.1:+33695213 | MS.gene69543:CDS |
GGGAGGGGAGAAGTATGATC+AGG | 0.544850 | 3.1:+33696707 | MS.gene69543:CDS |
GCAATGCCAATGATGTGAGT+AGG | 0.545706 | 3.1:+33689841 | MS.gene69543:CDS |
CACTCAAGACCTGATAATGA+TGG | 0.547852 | 3.1:+33688736 | MS.gene69543:CDS |
TACTCTGTTCTTGTCAAGGG+AGG | 0.547981 | 3.1:+33696690 | MS.gene69543:CDS |
CGCTCCAATGTTCTCCGGAT+AGG | 0.548653 | 3.1:-33692574 | None:intergenic |
CTTATACGGACGACTATATG+TGG | 0.549012 | 3.1:+33700072 | MS.gene69543:CDS |
CAAAGAATGTAATACGGCTG+CGG | 0.549356 | 3.1:-33695413 | None:intergenic |
TTCATTTGGCAACTCATCAA+CGG | 0.549912 | 3.1:-33685599 | None:intergenic |
ATAAAAGCTGGGAATCTTGG+TGG | 0.550491 | 3.1:+33700683 | MS.gene69543:CDS |
TATGGAAGAACGCTCTTGCG+TGG | 0.550572 | 3.1:+33700334 | MS.gene69543:CDS |
ACCACGTTGAGATTGTGATA+AGG | 0.551960 | 3.1:-33700528 | None:intergenic |
CAAGCTTCCTGGTCCTCCTA+CGG | 0.552560 | 3.1:+33697173 | MS.gene69543:CDS |
GCCAAACCAGCACTGCAGCT+GGG | 0.552948 | 3.1:+33691443 | MS.gene69543:CDS |
TATATCTCTGGGTAAGCTCA+TGG | 0.554407 | 3.1:-33687890 | None:intergenic |
CATATTGATAGATAAAGAAA+CGG | 0.554771 | 3.1:-33700774 | None:intergenic |
ACAGATTGGAAGCGGTGGAT+GGG | 0.555721 | 3.1:+33700631 | MS.gene69543:CDS |
TTCAATCAAGCATTTAGTAG+AGG | 0.556614 | 3.1:+33701711 | MS.gene69543:CDS |
TTTCTACGAGAAGAGAATCC+GGG | 0.557673 | 3.1:+33687959 | MS.gene69543:CDS |
AGCTTTCGTTCCAAGCTGAA+AGG | 0.558107 | 3.1:-33700305 | None:intergenic |
CTTTCAAGAATTACGAGTCA+TGG | 0.558567 | 3.1:+33689425 | MS.gene69543:CDS |
AATTATCAGCAAACTTTGTG+TGG | 0.560448 | 3.1:-33700399 | None:intergenic |
CCAAAATTGTATGTTGGCCA+GGG | 0.560709 | 3.1:+33692723 | MS.gene69543:CDS |
CTACAGATTGGAATCTGGAT+CGG | 0.560942 | 3.1:-33693780 | None:intergenic |
TTCAAATGATGAACTCAAAG+AGG | 0.561639 | 3.1:+33695771 | MS.gene69543:CDS |
ATCTCTTAGATAAGGACCAT+TGG | 0.562774 | 3.1:+33693751 | MS.gene69543:intron |
GAGATGCCAAGGCTTGTTCG+AGG | 0.562846 | 3.1:-33700153 | None:intergenic |
TTTAACAATAGGTATTCAGA+TGG | 0.565269 | 3.1:+33689562 | MS.gene69543:intron |
TCCACCTATCCGGAGAACAT+TGG | 0.567090 | 3.1:+33692570 | MS.gene69543:CDS |
GCTCAAGTTCCGTATTCTCA+AGG | 0.567411 | 3.1:+33701236 | MS.gene69543:CDS |
TGAAACAAACGACGAATCAG+GGG | 0.569431 | 3.1:+33696656 | MS.gene69543:CDS |
ACGACGAAACCACGACCAGT+TGG | 0.569591 | 3.1:-33700373 | None:intergenic |
AACCACGATAAAACTGCTGT+TGG | 0.570025 | 3.1:-33701654 | None:intergenic |
TGCTTGGTTTATGTCAAACC+AGG | 0.570726 | 3.1:+33697609 | MS.gene69543:CDS |
CATCATGAGTACATACAAGT+TGG | 0.570746 | 3.1:+33699461 | MS.gene69543:CDS |
ACACCACTCACATTTGACAT+TGG | 0.570828 | 3.1:-33686702 | None:intergenic |
TTCTTATCTTGAATGCAATG+AGG | 0.571180 | 3.1:+33692353 | MS.gene69543:CDS |
AGAATAATGGCCCATCCAGA+GGG | 0.572000 | 3.1:-33701357 | None:intergenic |
GAAGAGATCAGTGATGGAGA+AGG | 0.572936 | 3.1:+33695219 | MS.gene69543:CDS |
AAGGATTTGCCAAAACTCGT+TGG | 0.573344 | 3.1:-33697654 | None:intergenic |
AAACCAATTTCCATAAGGAT+GGG | 0.574353 | 3.1:-33700211 | None:intergenic |
CTTATTTATGAATATGCCAA+AGG | 0.575125 | 3.1:+33695443 | MS.gene69543:CDS |
GTTGGTAAGGGTGTAGATGT+TGG | 0.576297 | 3.1:+33699479 | MS.gene69543:CDS |
GTGATGTTTATCGTCTTGGA+CGG | 0.576315 | 3.1:+33699567 | MS.gene69543:CDS |
CCTCCTACGGAAATTGGTGA+AGG | 0.576974 | 3.1:+33697186 | MS.gene69543:CDS |
TGCAGGATGATGCATATGAA+CGG | 0.578017 | 3.1:+33693972 | MS.gene69543:intron |
GAAGCACTGAAGACTATGCT+AGG | 0.578386 | 3.1:+33688143 | MS.gene69543:CDS |
AACAACAGACTGAGATGCCA+AGG | 0.578685 | 3.1:-33700164 | None:intergenic |
GGCCCATCCAGAGGGCATGA+AGG | 0.578815 | 3.1:-33701349 | None:intergenic |
ATCTTCCACATTACCAGAGG+TGG | 0.582043 | 3.1:+33699277 | MS.gene69543:CDS |
TTCTACAATGCCTATGGAGA+GGG | 0.582891 | 3.1:+33688759 | MS.gene69543:CDS |
AGAGATCTGCTAAAACTGAC+TGG | 0.582978 | 3.1:-33692448 | None:intergenic |
GATTCCTATAGCTGTGGACA+TGG | 0.583007 | 3.1:+33694479 | MS.gene69543:intron |
CAATGCCAATGATGTGAGTA+GGG | 0.584939 | 3.1:+33689842 | MS.gene69543:CDS |
AGAGGGCATGAAGGCAAGAA+CGG | 0.585402 | 3.1:-33701340 | None:intergenic |
AGTTTGCAAAGAATGTAATA+CGG | 0.586778 | 3.1:-33695419 | None:intergenic |
TATCTTCTGCACCTAGCAGA+AGG | 0.587264 | 3.1:-33694617 | None:intergenic |
CTCGCAAAGTCACTTTGTGA+AGG | 0.588329 | 3.1:+33700432 | MS.gene69543:CDS |
TGGGTCCCGAAGTCCCCAGT+TGG | 0.589182 | 3.1:-33692478 | None:intergenic |
AAATCTTGAAGAAGATAGGG+AGG | 0.590162 | 3.1:+33695971 | MS.gene69543:CDS |
TGTTGAATCATACCAAAGAT+CGG | 0.591523 | 3.1:+33700495 | MS.gene69543:CDS |
ATCCTTCCGCTACATGTCAT+CGG | 0.591942 | 3.1:+33688500 | MS.gene69543:CDS |
GAACAGGCCTGCATCTAATG+AGG | 0.592036 | 3.1:+33689026 | MS.gene69543:CDS |
TCGAGCGCTCCAATGTTCTC+CGG | 0.592572 | 3.1:-33692579 | None:intergenic |
AGATGCCAAGGCTTGTTCGA+GGG | 0.593027 | 3.1:-33700152 | None:intergenic |
ACTGGACAGATTGGAAGCGG+TGG | 0.593350 | 3.1:+33700626 | MS.gene69543:CDS |
TTCATGCACATAAAGGGCAA+AGG | 0.595810 | 3.1:+33697430 | MS.gene69543:CDS |
AAACAGAAAGAATATACAAG+AGG | 0.596215 | 3.1:+33693837 | MS.gene69543:CDS |
GCCAAATGAAGAAAATATTG+TGG | 0.596288 | 3.1:+33685612 | MS.gene69543:CDS |
TTGATGTTTCTGTCATCCAG+TGG | 0.597498 | 3.1:+33694201 | MS.gene69543:CDS |
GGAGGAGTATGTTCGTCAGT+GGG | 0.598170 | 3.1:+33695989 | MS.gene69543:CDS |
ATAGATATAGACCTGATTGG+TGG | 0.598484 | 3.1:-33690301 | None:intergenic |
ATCTATGTATGCAACACGAA+GGG | 0.598717 | 3.1:-33696634 | None:intergenic |
TTGTGTCGGAGTTCCAAACC+CGG | 0.598999 | 3.1:+33701682 | MS.gene69543:CDS |
TATTCCATCTGATAAAAGCT+GGG | 0.599801 | 3.1:+33700672 | MS.gene69543:CDS |
TACCTCACCCAAATGGCTGA+AGG | 0.600864 | 3.1:-33693626 | None:intergenic |
ATGTTCTCCGGATAGGTGGA+AGG | 0.600960 | 3.1:-33692567 | None:intergenic |
CAGAATCATGATCCAGAAGA+GGG | 0.602286 | 3.1:-33693001 | None:intergenic |
TGGTCTGCAAAGCTTCTCCA+CGG | 0.604918 | 3.1:-33697245 | None:intergenic |
TCCAATGTTCTCCGGATAGG+TGG | 0.605129 | 3.1:-33692571 | None:intergenic |
TGAAATACTTAAATGTCAGA+GGG | 0.606826 | 3.1:+33700725 | MS.gene69543:CDS |
GTGATAGATTCCTATAGCTG+TGG | 0.607875 | 3.1:+33694473 | MS.gene69543:intron |
TTCCCTTCACCAATTTCCGT+AGG | 0.608580 | 3.1:-33697189 | None:intergenic |
GATCTCTGAAGAATCCAACT+GGG | 0.609630 | 3.1:+33692464 | MS.gene69543:CDS |
ATTTGAACCTGTTACTGATG+AGG | 0.610244 | 3.1:-33694057 | None:intergenic |
CCAGAATCATGATCCAGAAG+AGG | 0.611540 | 3.1:-33693002 | None:intergenic |
AATAATCCCACCAAACAAAG+TGG | 0.613828 | 3.1:-33693599 | None:intergenic |
GGGCATCAGATGGTTTCCAT+GGG | 0.614309 | 3.1:+33701186 | MS.gene69543:intron |
CATGTAGAGGACTCTTGAAG+TGG | 0.615187 | 3.1:+33701559 | MS.gene69543:CDS |
TCTGGATCGGAGCATTCCAA+TGG | 0.615418 | 3.1:-33693767 | None:intergenic |
TTCGAGTCTAAGGTAGCAAG+TGG | 0.615869 | 3.1:+33699521 | MS.gene69543:CDS |
AAGATTGCACAAACATGTAG+AGG | 0.615958 | 3.1:+33701546 | MS.gene69543:intron |
TGCTTGATTGAAGAGCAACC+GGG | 0.617463 | 3.1:-33701700 | None:intergenic |
GAATAGGACTGCATCTGATG+AGG | 0.619244 | 3.1:+33689227 | MS.gene69543:CDS |
AAGACTGGACAGATTGGAAG+CGG | 0.619375 | 3.1:+33700623 | MS.gene69543:CDS |
TCGCAAAGTCACTTTGTGAA+GGG | 0.620673 | 3.1:+33700433 | MS.gene69543:CDS |
TTCTGAAGGCAACCAGACAG+TGG | 0.621589 | 3.1:+33696344 | MS.gene69543:intron |
CACCGATGACATGTAGCGGA+AGG | 0.621967 | 3.1:-33688502 | None:intergenic |
GGGAGGAGTATGTTCGTCAG+TGG | 0.622038 | 3.1:+33695988 | MS.gene69543:CDS |
TAAAAGCTGGGAATCTTGGT+GGG | 0.622580 | 3.1:+33700684 | MS.gene69543:CDS |
CTCCTACGGAAATTGGTGAA+GGG | 0.625068 | 3.1:+33697187 | MS.gene69543:CDS |
AGCTGCTAGTGAGATTGAGG+AGG | 0.628749 | 3.1:+33685684 | MS.gene69543:CDS |
ATCATACTGAGCCTTCTGCT+AGG | 0.630216 | 3.1:+33694606 | MS.gene69543:CDS |
TTATGCCACCTCTGGTAATG+TGG | 0.631074 | 3.1:-33699282 | None:intergenic |
GGATGATAAGGAAACCAAGA+TGG | 0.631926 | 3.1:+33685575 | MS.gene69543:CDS |
CGACTATATGTGGTACTGAG+TGG | 0.632727 | 3.1:+33700082 | MS.gene69543:CDS |
TACAATTCAACTCTACGCCA+AGG | 0.633720 | 3.1:+33699428 | MS.gene69543:CDS |
GAGTACATACAAGTTGGTAA+GGG | 0.634987 | 3.1:+33699467 | MS.gene69543:CDS |
CATGGCGAAAGATTATAAGA+AGG | 0.636090 | 3.1:+33694497 | MS.gene69543:CDS |
CATGCCATTATATTTACCCG+TGG | 0.640407 | 3.1:+33697228 | MS.gene69543:CDS |
CATGATAATGAAATCACCCA+AGG | 0.644637 | 3.1:-33700254 | None:intergenic |
AGTTACCTGATTCATGTCGA+TGG | 0.645251 | 3.1:-33697265 | None:intergenic |
GGTCTGCAAAGCTTCTCCAC+GGG | 0.648574 | 3.1:-33697244 | None:intergenic |
GTTCTACAATGCCTATGGAG+AGG | 0.649257 | 3.1:+33688758 | MS.gene69543:CDS |
ATGTAGAGGACTCTTGAAGT+GGG | 0.650646 | 3.1:+33701560 | MS.gene69543:CDS |
AACCCAATAATAAATTGACT+GGG | 0.651916 | 3.1:-33692497 | None:intergenic |
GGAGATCATGAAACTTCCCA+AGG | 0.657560 | 3.1:+33688532 | MS.gene69543:CDS |
TACGAGAAGAGAATCCGGGA+TGG | 0.662323 | 3.1:+33687963 | MS.gene69543:CDS |
CAGTTGACAAGAAACTACAT+AGG | 0.667096 | 3.1:-33696430 | None:intergenic |
CGGTGGATGGGAAACCGTGG+TGG | 0.670266 | 3.1:+33700643 | MS.gene69543:CDS |
GAACACATACACTGTCAGCA+CGG | 0.670807 | 3.1:-33700050 | None:intergenic |
TACGATGAGCAATATTCAGG+TGG | 0.672374 | 3.1:-33700807 | None:intergenic |
CATCTATGTATGCAACACGA+AGG | 0.675839 | 3.1:-33696635 | None:intergenic |
TGCATATAGATAACTACCAG+TGG | 0.676094 | 3.1:+33693271 | MS.gene69543:CDS |
CGTCAGTGGGCATCTTACAG+AGG | 0.677143 | 3.1:+33696002 | MS.gene69543:CDS |
AAGCGGTGGATGGGAAACCG+TGG | 0.679554 | 3.1:+33700640 | MS.gene69543:CDS |
ATCTCTGAAGAATCCAACTG+GGG | 0.683031 | 3.1:+33692465 | MS.gene69543:CDS |
GTCCAAGACGATAAACATCA+CGG | 0.685939 | 3.1:-33699565 | None:intergenic |
GGAAGAACGCTCTTGCGTGG+AGG | 0.686516 | 3.1:+33700337 | MS.gene69543:CDS |
CGAATGCTATGAGACTCTCA+AGG | 0.691615 | 3.1:+33694581 | MS.gene69543:CDS |
TTGCTAGCAAGCAAGAATGG+AGG | 0.692919 | 3.1:-33694224 | None:intergenic |
AAATTCATATGGCAGGCCCG+AGG | 0.696096 | 3.1:+33691421 | MS.gene69543:intron |
TCAACACCGATGACATGTAG+CGG | 0.696385 | 3.1:-33688506 | None:intergenic |
GGCATTCAGTTACTACGTGG+AGG | 0.697705 | 3.1:+33693035 | MS.gene69543:CDS |
GAAACAAACGACGAATCAGG+GGG | 0.710168 | 3.1:+33696657 | MS.gene69543:CDS |
AGAATCTTCCACATTACCAG+AGG | 0.713468 | 3.1:+33699274 | MS.gene69543:CDS |
GATCCAATGTCAAATGTGAG+TGG | 0.721783 | 3.1:+33686699 | MS.gene69543:CDS |
TCCTTATCACAATCTCAACG+TGG | 0.722250 | 3.1:+33700527 | MS.gene69543:CDS |
CTAACAGTATAAGTATCTCG+AGG | 0.741450 | 3.1:-33700456 | None:intergenic |
ATGGAATACCAATACCACCA+CGG | 0.761608 | 3.1:-33700657 | None:intergenic |
ACTGGCATTCAGTTACTACG+TGG | 0.765400 | 3.1:+33693032 | MS.gene69543:CDS |
CTGAAAGGAAAAGAACACAG+AGG | 0.776506 | 3.1:-33700290 | None:intergenic |
ACTGAAATAGAAACCAACTG+TGG | 0.809489 | 3.1:-33699627 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr3.1 | gene | 33685550 | 33701788 | 33685550 | ID=MS.gene69543 |
chr3.1 | mRNA | 33685550 | 33701788 | 33685550 | ID=MS.gene69543.t1;Parent=MS.gene69543 |
chr3.1 | exon | 33685550 | 33685730 | 33685550 | ID=MS.gene69543.t1.exon1;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33685550 | 33685730 | 33685550 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33686664 | 33686764 | 33686664 | ID=MS.gene69543.t1.exon2;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33686664 | 33686764 | 33686664 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33687888 | 33688003 | 33687888 | ID=MS.gene69543.t1.exon3;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33687888 | 33688003 | 33687888 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33688100 | 33688187 | 33688100 | ID=MS.gene69543.t1.exon4;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33688100 | 33688187 | 33688100 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33688443 | 33688553 | 33688443 | ID=MS.gene69543.t1.exon5;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33688443 | 33688553 | 33688443 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33688679 | 33688834 | 33688679 | ID=MS.gene69543.t1.exon6;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33688679 | 33688834 | 33688679 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33688964 | 33689047 | 33688964 | ID=MS.gene69543.t1.exon7;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33688964 | 33689047 | 33688964 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33689165 | 33689248 | 33689165 | ID=MS.gene69543.t1.exon8;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33689165 | 33689248 | 33689165 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33689388 | 33689479 | 33689388 | ID=MS.gene69543.t1.exon9;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33689388 | 33689479 | 33689388 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33689573 | 33689696 | 33689573 | ID=MS.gene69543.t1.exon10;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33689573 | 33689696 | 33689573 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33689807 | 33689944 | 33689807 | ID=MS.gene69543.t1.exon11;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33689807 | 33689944 | 33689807 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33690033 | 33690109 | 33690033 | ID=MS.gene69543.t1.exon12;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33690033 | 33690109 | 33690033 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33690224 | 33690311 | 33690224 | ID=MS.gene69543.t1.exon13;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33690224 | 33690311 | 33690224 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33691436 | 33691564 | 33691436 | ID=MS.gene69543.t1.exon14;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33691436 | 33691564 | 33691436 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33691691 | 33691808 | 33691691 | ID=MS.gene69543.t1.exon15;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33691691 | 33691808 | 33691691 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33692338 | 33692639 | 33692338 | ID=MS.gene69543.t1.exon16;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33692338 | 33692639 | 33692338 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33692723 | 33692775 | 33692723 | ID=MS.gene69543.t1.exon17;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33692723 | 33692775 | 33692723 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33692996 | 33693056 | 33692996 | ID=MS.gene69543.t1.exon18;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33692996 | 33693056 | 33692996 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33693231 | 33693315 | 33693231 | ID=MS.gene69543.t1.exon19;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33693231 | 33693315 | 33693231 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33693402 | 33693451 | 33693402 | ID=MS.gene69543.t1.exon20;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33693402 | 33693451 | 33693402 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33693559 | 33693645 | 33693559 | ID=MS.gene69543.t1.exon21;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33693559 | 33693645 | 33693559 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33693760 | 33693864 | 33693760 | ID=MS.gene69543.t1.exon22;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33693760 | 33693864 | 33693760 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33693977 | 33694071 | 33693977 | ID=MS.gene69543.t1.exon23;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33693977 | 33694071 | 33693977 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33694166 | 33694247 | 33694166 | ID=MS.gene69543.t1.exon24;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33694166 | 33694247 | 33694166 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33694480 | 33694643 | 33694480 | ID=MS.gene69543.t1.exon25;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33694480 | 33694643 | 33694480 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33694744 | 33694867 | 33694744 | ID=MS.gene69543.t1.exon26;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33694744 | 33694867 | 33694744 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33694962 | 33695056 | 33694962 | ID=MS.gene69543.t1.exon27;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33694962 | 33695056 | 33694962 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33695168 | 33695240 | 33695168 | ID=MS.gene69543.t1.exon28;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33695168 | 33695240 | 33695168 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33695345 | 33695496 | 33695345 | ID=MS.gene69543.t1.exon29;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33695345 | 33695496 | 33695345 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33695735 | 33695844 | 33695735 | ID=MS.gene69543.t1.exon30;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33695735 | 33695844 | 33695735 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33695934 | 33696044 | 33695934 | ID=MS.gene69543.t1.exon31;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33695934 | 33696044 | 33695934 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33696165 | 33696221 | 33696165 | ID=MS.gene69543.t1.exon32;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33696165 | 33696221 | 33696165 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33696352 | 33696526 | 33696352 | ID=MS.gene69543.t1.exon33;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33696352 | 33696526 | 33696352 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33696626 | 33696728 | 33696626 | ID=MS.gene69543.t1.exon34;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33696626 | 33696728 | 33696626 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33697159 | 33697281 | 33697159 | ID=MS.gene69543.t1.exon35;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33697159 | 33697281 | 33697159 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33697381 | 33697496 | 33697381 | ID=MS.gene69543.t1.exon36;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33697381 | 33697496 | 33697381 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33697597 | 33697680 | 33697597 | ID=MS.gene69543.t1.exon37;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33697597 | 33697680 | 33697597 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33699240 | 33699349 | 33699240 | ID=MS.gene69543.t1.exon38;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33699240 | 33699349 | 33699240 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33699426 | 33699655 | 33699426 | ID=MS.gene69543.t1.exon39;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33699426 | 33699655 | 33699426 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33700046 | 33700843 | 33700046 | ID=MS.gene69543.t1.exon40;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33700046 | 33700843 | 33700046 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33700931 | 33700981 | 33700931 | ID=MS.gene69543.t1.exon41;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33700931 | 33700981 | 33700931 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33701195 | 33701380 | 33701195 | ID=MS.gene69543.t1.exon42;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33701195 | 33701380 | 33701195 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
chr3.1 | exon | 33701549 | 33701788 | 33701549 | ID=MS.gene69543.t1.exon43;Parent=MS.gene69543.t1 |
chr3.1 | CDS | 33701549 | 33701788 | 33701549 | ID=cds.MS.gene69543.t1;Parent=MS.gene69543.t1 |
Gene Sequence |
Protein sequence |