Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69912.t1 | QCE07404.1 | 72.7 | 534 | 137 | 3 | 1 | 529 | 55 | 584 | 9.10E-214 | 753.1 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69912.t1 | Q43317 | 72.1 | 265 | 74 | 0 | 264 | 528 | 31 | 295 | 1.2e-102 | 375.2 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69912.t1 | A0A4D6N3F9 | 72.7 | 534 | 137 | 3 | 1 | 529 | 55 | 584 | 6.6e-214 | 753.1 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|---|---|---|---|
MS.gene058738 | MS.gene69912 | 0.825875 | 3.69E-54 | -1.69E-46 |
MS.gene058739 | MS.gene69912 | 0.854869 | 9.23E-62 | -1.69E-46 |
PPI:
Gene1 | Gene2 | Type |
---|
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69912.t1 | MTR_1g081625 | 90.602 | 266 | 25 | 0 | 264 | 529 | 30 | 295 | 7.82e-153 | 440 |
MS.gene69912.t1 | MTR_1g081625 | 89.583 | 240 | 25 | 0 | 1 | 240 | 55 | 294 | 9.32e-139 | 404 |
MS.gene69912.t1 | MTR_1g081620 | 89.179 | 268 | 23 | 2 | 1 | 262 | 55 | 322 | 1.06e-150 | 434 |
MS.gene69912.t1 | MTR_1g081620 | 81.203 | 266 | 50 | 0 | 264 | 529 | 30 | 295 | 7.75e-139 | 404 |
MS.gene69912.t1 | MTR_1g081640 | 85.652 | 230 | 33 | 0 | 1 | 230 | 55 | 284 | 1.15e-125 | 370 |
MS.gene69912.t1 | MTR_1g081640 | 77.647 | 255 | 57 | 0 | 264 | 518 | 30 | 284 | 4.16e-124 | 367 |
MS.gene69912.t1 | MTR_1g081610 | 71.429 | 266 | 76 | 0 | 264 | 529 | 31 | 296 | 1.12e-111 | 335 |
MS.gene69912.t1 | MTR_1g081610 | 76.667 | 240 | 56 | 0 | 1 | 240 | 56 | 295 | 7.43e-110 | 330 |
MS.gene69912.t1 | MTR_5g006340 | 69.925 | 266 | 80 | 0 | 264 | 529 | 31 | 296 | 1.48e-110 | 332 |
MS.gene69912.t1 | MTR_5g006340 | 75.000 | 240 | 60 | 0 | 1 | 240 | 56 | 295 | 3.10e-108 | 326 |
MS.gene69912.t1 | MTR_4g087490 | 62.016 | 258 | 98 | 0 | 272 | 529 | 78 | 335 | 3.28e-110 | 333 |
MS.gene69912.t1 | MTR_4g087490 | 64.167 | 240 | 86 | 0 | 1 | 240 | 95 | 334 | 7.30e-109 | 329 |
MS.gene69912.t1 | MTR_1g103690 | 70.155 | 258 | 77 | 0 | 272 | 529 | 39 | 296 | 5.87e-108 | 325 |
MS.gene69912.t1 | MTR_1g103690 | 74.167 | 240 | 62 | 0 | 1 | 240 | 56 | 295 | 1.24e-106 | 322 |
MS.gene69912.t1 | MTR_4g087510 | 59.302 | 258 | 97 | 1 | 272 | 529 | 77 | 326 | 1.23e-102 | 313 |
MS.gene69912.t1 | MTR_4g087510 | 62.083 | 240 | 83 | 1 | 1 | 240 | 94 | 325 | 1.63e-102 | 313 |
MS.gene69912.t1 | MTR_7g078070 | 63.071 | 241 | 89 | 0 | 1 | 241 | 16 | 256 | 1.65e-102 | 310 |
MS.gene69912.t1 | MTR_7g078070 | 57.255 | 255 | 109 | 0 | 274 | 528 | 1 | 255 | 1.02e-98 | 300 |
MS.gene69912.t1 | MTR_7g078070 | 63.071 | 241 | 89 | 0 | 1 | 241 | 49 | 289 | 8.41e-102 | 309 |
MS.gene69912.t1 | MTR_7g078070 | 55.849 | 265 | 117 | 0 | 264 | 528 | 24 | 288 | 5.34e-99 | 302 |
MS.gene69912.t1 | MTR_7g078070 | 63.071 | 241 | 89 | 0 | 1 | 241 | 109 | 349 | 9.59e-102 | 311 |
MS.gene69912.t1 | MTR_7g078070 | 55.849 | 265 | 117 | 0 | 264 | 528 | 84 | 348 | 8.59e-99 | 304 |
MS.gene69912.t1 | MTR_4g087520 | 66.946 | 239 | 79 | 0 | 1 | 239 | 1 | 239 | 3.91e-99 | 301 |
MS.gene69912.t1 | MTR_4g087520 | 66.527 | 239 | 80 | 0 | 289 | 527 | 1 | 239 | 1.76e-96 | 294 |
MS.gene69912.t1 | MTR_7g087110 | 59.833 | 239 | 86 | 1 | 1 | 239 | 113 | 341 | 1.99e-82 | 261 |
MS.gene69912.t1 | MTR_7g087110 | 59.756 | 246 | 89 | 1 | 284 | 529 | 108 | 343 | 2.14e-82 | 261 |
MS.gene69912.t1 | MTR_5g095670 | 29.617 | 287 | 144 | 4 | 1 | 230 | 92 | 377 | 3.18e-30 | 123 |
MS.gene69912.t1 | MTR_5g095670 | 28.896 | 308 | 156 | 7 | 284 | 532 | 87 | 390 | 2.20e-28 | 117 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene69912.t1 | AT2G43750 | 68.045 | 266 | 85 | 0 | 264 | 529 | 98 | 363 | 2.94e-108 | 328 |
MS.gene69912.t1 | AT2G43750 | 73.222 | 239 | 64 | 0 | 1 | 239 | 123 | 361 | 1.33e-107 | 327 |
MS.gene69912.t1 | AT2G43750 | 68.045 | 266 | 85 | 0 | 264 | 529 | 98 | 363 | 2.94e-108 | 328 |
MS.gene69912.t1 | AT2G43750 | 73.222 | 239 | 64 | 0 | 1 | 239 | 123 | 361 | 1.33e-107 | 327 |
MS.gene69912.t1 | AT4G14880 | 67.170 | 265 | 87 | 0 | 264 | 528 | 28 | 292 | 4.73e-108 | 325 |
MS.gene69912.t1 | AT4G14880 | 70.954 | 241 | 70 | 0 | 1 | 241 | 53 | 293 | 4.03e-107 | 323 |
MS.gene69912.t1 | AT4G14880 | 67.170 | 265 | 87 | 0 | 264 | 528 | 28 | 292 | 4.73e-108 | 325 |
MS.gene69912.t1 | AT4G14880 | 70.954 | 241 | 70 | 0 | 1 | 241 | 53 | 293 | 4.03e-107 | 323 |
MS.gene69912.t1 | AT4G14880 | 67.170 | 265 | 87 | 0 | 264 | 528 | 28 | 292 | 4.73e-108 | 325 |
MS.gene69912.t1 | AT4G14880 | 70.954 | 241 | 70 | 0 | 1 | 241 | 53 | 293 | 4.03e-107 | 323 |
MS.gene69912.t1 | AT4G14880 | 67.170 | 265 | 87 | 0 | 264 | 528 | 28 | 292 | 4.73e-108 | 325 |
MS.gene69912.t1 | AT4G14880 | 70.954 | 241 | 70 | 0 | 1 | 241 | 53 | 293 | 4.03e-107 | 323 |
MS.gene69912.t1 | AT4G14880 | 67.170 | 265 | 87 | 0 | 264 | 528 | 28 | 292 | 4.73e-108 | 325 |
MS.gene69912.t1 | AT4G14880 | 70.954 | 241 | 70 | 0 | 1 | 241 | 53 | 293 | 4.03e-107 | 323 |
MS.gene69912.t1 | AT3G04940 | 71.250 | 240 | 69 | 0 | 1 | 240 | 56 | 295 | 5.76e-108 | 325 |
MS.gene69912.t1 | AT3G04940 | 65.038 | 266 | 93 | 0 | 264 | 529 | 31 | 296 | 1.13e-106 | 322 |
MS.gene69912.t1 | AT3G04940 | 71.250 | 240 | 69 | 0 | 1 | 240 | 56 | 295 | 5.76e-108 | 325 |
MS.gene69912.t1 | AT3G04940 | 65.038 | 266 | 93 | 0 | 264 | 529 | 31 | 296 | 1.13e-106 | 322 |
MS.gene69912.t1 | AT3G59760 | 66.418 | 268 | 90 | 0 | 264 | 531 | 136 | 403 | 6.09e-108 | 329 |
MS.gene69912.t1 | AT3G59760 | 71.130 | 239 | 69 | 0 | 1 | 239 | 161 | 399 | 5.00e-106 | 324 |
MS.gene69912.t1 | AT3G59760 | 66.165 | 266 | 90 | 0 | 264 | 529 | 136 | 401 | 7.68e-107 | 326 |
MS.gene69912.t1 | AT3G59760 | 65.909 | 264 | 84 | 1 | 1 | 258 | 161 | 424 | 2.05e-106 | 325 |
MS.gene69912.t1 | AT3G59760 | 66.165 | 266 | 90 | 0 | 264 | 529 | 136 | 401 | 9.29e-107 | 326 |
MS.gene69912.t1 | AT3G59760 | 66.667 | 264 | 82 | 2 | 1 | 258 | 161 | 424 | 2.35e-106 | 325 |
MS.gene69912.t1 | AT3G22460 | 67.220 | 241 | 59 | 1 | 1 | 241 | 1 | 221 | 7.49e-104 | 312 |
MS.gene69912.t1 | AT3G22460 | 66.667 | 240 | 60 | 1 | 289 | 528 | 1 | 220 | 4.01e-102 | 308 |
MS.gene69912.t1 | AT5G28020 | 65.414 | 266 | 92 | 0 | 264 | 529 | 30 | 295 | 5.84e-101 | 307 |
MS.gene69912.t1 | AT5G28020 | 68.333 | 240 | 76 | 0 | 1 | 240 | 55 | 294 | 1.41e-97 | 299 |
MS.gene69912.t1 | AT5G28020 | 65.414 | 266 | 92 | 0 | 264 | 529 | 30 | 295 | 5.84e-101 | 307 |
MS.gene69912.t1 | AT5G28020 | 68.333 | 240 | 76 | 0 | 1 | 240 | 55 | 294 | 1.41e-97 | 299 |
MS.gene69912.t1 | AT5G28020 | 65.414 | 266 | 92 | 0 | 264 | 529 | 30 | 295 | 5.84e-101 | 307 |
MS.gene69912.t1 | AT5G28020 | 68.333 | 240 | 76 | 0 | 1 | 240 | 55 | 294 | 1.41e-97 | 299 |
MS.gene69912.t1 | AT5G28020 | 65.414 | 266 | 92 | 0 | 264 | 529 | 30 | 295 | 5.84e-101 | 307 |
MS.gene69912.t1 | AT5G28020 | 68.333 | 240 | 76 | 0 | 1 | 240 | 55 | 294 | 1.41e-97 | 299 |
MS.gene69912.t1 | AT5G28020 | 65.414 | 266 | 92 | 0 | 264 | 529 | 30 | 295 | 5.84e-101 | 307 |
MS.gene69912.t1 | AT5G28020 | 68.333 | 240 | 76 | 0 | 1 | 240 | 55 | 294 | 1.41e-97 | 299 |
MS.gene69912.t1 | AT5G28030 | 65.789 | 266 | 91 | 0 | 264 | 529 | 30 | 295 | 3.08e-98 | 300 |
MS.gene69912.t1 | AT5G28030 | 69.583 | 240 | 73 | 0 | 1 | 240 | 55 | 294 | 1.42e-96 | 296 |
MS.gene69912.t1 | AT5G28030 | 65.789 | 266 | 91 | 0 | 264 | 529 | 30 | 295 | 3.08e-98 | 300 |
MS.gene69912.t1 | AT5G28030 | 69.583 | 240 | 73 | 0 | 1 | 240 | 55 | 294 | 1.42e-96 | 296 |
MS.gene69912.t1 | AT5G28030 | 65.789 | 266 | 91 | 0 | 264 | 529 | 30 | 295 | 3.08e-98 | 300 |
MS.gene69912.t1 | AT5G28030 | 69.583 | 240 | 73 | 0 | 1 | 240 | 55 | 294 | 1.42e-96 | 296 |
MS.gene69912.t1 | AT5G28030 | 65.789 | 266 | 91 | 0 | 264 | 529 | 30 | 295 | 3.08e-98 | 300 |
MS.gene69912.t1 | AT5G28030 | 69.583 | 240 | 73 | 0 | 1 | 240 | 55 | 294 | 1.42e-96 | 296 |
MS.gene69912.t1 | AT3G61440 | 61.826 | 241 | 92 | 0 | 1 | 241 | 1 | 241 | 5.25e-98 | 298 |
MS.gene69912.t1 | AT3G61440 | 59.583 | 240 | 97 | 0 | 289 | 528 | 1 | 240 | 8.61e-93 | 285 |
MS.gene69912.t1 | AT3G61440 | 61.826 | 241 | 92 | 0 | 1 | 241 | 97 | 337 | 2.91e-97 | 300 |
MS.gene69912.t1 | AT3G61440 | 58.167 | 251 | 105 | 0 | 278 | 528 | 86 | 336 | 4.98e-95 | 294 |
MS.gene69912.t1 | AT3G61440 | 59.722 | 216 | 87 | 0 | 1 | 216 | 97 | 312 | 3.47e-84 | 265 |
MS.gene69912.t1 | AT3G61440 | 55.947 | 227 | 100 | 0 | 278 | 504 | 86 | 312 | 5.23e-83 | 261 |
MS.gene69912.t1 | AT3G61440 | 60.465 | 215 | 85 | 0 | 27 | 241 | 2 | 216 | 4.05e-84 | 261 |
MS.gene69912.t1 | AT3G61440 | 58.411 | 214 | 89 | 0 | 315 | 528 | 2 | 215 | 2.28e-79 | 249 |
MS.gene69912.t1 | AT3G03630 | 53.947 | 304 | 105 | 4 | 241 | 529 | 94 | 377 | 1.37e-81 | 260 |
MS.gene69912.t1 | AT3G03630 | 61.506 | 239 | 82 | 1 | 1 | 239 | 147 | 375 | 6.67e-81 | 258 |
MS.gene69912.t1 | AT5G28030 | 63.348 | 221 | 81 | 0 | 264 | 484 | 30 | 250 | 4.27e-80 | 251 |
MS.gene69912.t1 | AT5G28030 | 68.367 | 196 | 62 | 0 | 1 | 196 | 55 | 250 | 3.53e-79 | 249 |
MS.gene69912.t1 | AT5G28020 | 66.827 | 208 | 69 | 0 | 33 | 240 | 1 | 208 | 1.16e-78 | 247 |
MS.gene69912.t1 | AT5G28020 | 67.464 | 209 | 68 | 0 | 321 | 529 | 1 | 209 | 5.03e-78 | 245 |
MS.gene69912.t1 | AT3G22460 | 64.557 | 158 | 56 | 0 | 264 | 421 | 31 | 188 | 1.47e-65 | 211 |
MS.gene69912.t1 | AT3G22460 | 73.684 | 133 | 35 | 0 | 1 | 133 | 56 | 188 | 1.56e-64 | 208 |
MS.gene69912.t1 | AT1G55880 | 28.125 | 288 | 148 | 6 | 1 | 230 | 88 | 374 | 4.23e-26 | 111 |
MS.gene69912.t1 | AT1G55880 | 27.362 | 307 | 163 | 6 | 284 | 532 | 83 | 387 | 2.10e-25 | 108 |
MS.gene69912.t1 | AT1G55880 | 30.846 | 201 | 97 | 3 | 284 | 443 | 83 | 282 | 1.34e-22 | 99.8 |
MS.gene69912.t1 | AT1G55880 | 32.020 | 203 | 96 | 5 | 1 | 162 | 88 | 289 | 2.87e-22 | 98.6 |
Find 148 sgRNAs with CRISPR-Local
Find 0 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
ACAGCAGCTGCAATAAAATT+AGG | 0.184994 | 1.4:+66094590 | MS.gene69912:CDS |
CTCTCAAGACTCACATAAAA+TGG | 0.240479 | 1.4:-66098167 | None:intergenic |
AGAATTCTACTCAGAGCTTT+TGG | 0.254376 | 1.4:+66098191 | MS.gene69912:CDS |
TCTACTAGATGAAGTTATTC+AGG | 0.259370 | 1.4:+66093606 | MS.gene69912:CDS |
TAAGTTTATGTCACAAATAA+TGG | 0.279753 | 1.4:+66099827 | MS.gene69912:CDS |
TGCCTTGAAAGAAGGTTTAC+TGG | 0.283658 | 1.4:+66093962 | MS.gene69912:CDS |
TGCCTTGAAAGAAGGTTTAC+TGG | 0.283658 | 1.4:+66099398 | MS.gene69912:CDS |
TTGGTTGCAGGGATAGGAAC+TGG | 0.301174 | 1.4:+66092580 | MS.gene69912:CDS |
AGACCACTGGCCCTGAGATT+TGG | 0.302016 | 1.4:+66098433 | MS.gene69912:CDS |
ATTTGACTAATTACCTTTCC+AGG | 0.303581 | 1.4:-66091761 | None:intergenic |
TGATTGAACATATAACTATT+AGG | 0.309230 | 1.4:-66098293 | None:intergenic |
TCTTCTAGATGAAGTTATTC+AGG | 0.311475 | 1.4:+66099024 | MS.gene69912:CDS |
AGAGTTGATGCTTTGGTTGC+AGG | 0.314791 | 1.4:+66092568 | MS.gene69912:CDS |
AAAATTGATGCTTTGGTTGC+AGG | 0.319930 | 1.4:+66098471 | MS.gene69912:CDS |
AGACCACTGGCCCTGAGATT+TGG | 0.324065 | 1.4:+66092530 | MS.gene69912:CDS |
GATCCTGCCAAAGGAATAAA+AGG | 0.331825 | 1.4:+66098233 | MS.gene69912:CDS |
GTCAGGGATCAACTTGAGTT+TGG | 0.351805 | 1.4:+66095573 | MS.gene69912:CDS |
TGGAGGGAGAGTTGATGCTT+TGG | 0.358657 | 1.4:+66092561 | MS.gene69912:CDS |
TGGTATCATTCCTCCTGTTC+TGG | 0.360071 | 1.4:+66098994 | MS.gene69912:CDS |
ACTATTCATACCTTGATCTC+TGG | 0.360280 | 1.4:-66092646 | None:intergenic |
TGGAGGGAAAATTGATGCTT+TGG | 0.373019 | 1.4:+66098464 | MS.gene69912:CDS |
CCAGAGTCTTTCCAAATCTC+AGG | 0.373679 | 1.4:-66092541 | None:intergenic |
CATCTAGTAGATCAACTTCC+AGG | 0.383555 | 1.4:-66093594 | None:intergenic |
AAAATTATACTGCGAGCTTT+CGG | 0.393798 | 1.4:+66092288 | MS.gene69912:CDS |
AAATTAGTAACTACCTTTCC+CGG | 0.398806 | 1.4:-66097168 | None:intergenic |
AGGTGTTGGGAAGTTTCTTA+AGG | 0.398952 | 1.4:+66098518 | MS.gene69912:CDS |
CCAGAGTCTCTCCAAATCTC+AGG | 0.400543 | 1.4:-66098444 | None:intergenic |
ACCAACTGAAAGTCCAGTTC+TGG | 0.403977 | 1.4:+66098655 | MS.gene69912:CDS |
TGATTGAGCATATAACTATT+AGG | 0.407097 | 1.4:-66092390 | None:intergenic |
TACCAGTAAACCTTCTTTCA+AGG | 0.409533 | 1.4:-66093964 | None:intergenic |
TACCAGTAAACCTTCTTTCA+AGG | 0.409533 | 1.4:-66099400 | None:intergenic |
TTCGAGCACCACCTTGAATC+TGG | 0.412506 | 1.4:+66095617 | MS.gene69912:CDS |
ATGCCGGTGTTACCACTTGT+TGG | 0.412993 | 1.4:-66092189 | None:intergenic |
ATGCCGGTGTTACCACTTGT+TGG | 0.412993 | 1.4:-66098092 | None:intergenic |
TTGCAGATGGGAATTTCATC+AGG | 0.416958 | 1.4:+66094560 | MS.gene69912:intron |
AGCCGTTAGCTGAAGAAGTC+AGG | 0.417349 | 1.4:+66095556 | MS.gene69912:CDS |
GACTTTCCTCCATCCAGAAC+TGG | 0.417577 | 1.4:-66098668 | None:intergenic |
TTGCAGATGGGAATTTCATC+AGG | 0.417954 | 1.4:+66099739 | MS.gene69912:intron |
GGAACTGGAGGAACAGTAAC+AGG | 0.423268 | 1.4:+66098498 | MS.gene69912:CDS |
ATTGAAGATGCTGAGAATAA+AGG | 0.425340 | 1.4:+66097135 | MS.gene69912:CDS |
TTGGTTGCAGGGATAGGAAC+TGG | 0.425930 | 1.4:+66098483 | MS.gene69912:CDS |
GACAATACCTTTAGATTGGC+AGG | 0.429665 | 1.4:-66098326 | None:intergenic |
CAGCAGCTGCAATAAAATTA+GGG | 0.431631 | 1.4:+66094591 | MS.gene69912:CDS |
CAGCACCGATCCCTTGGATT+AGG | 0.432171 | 1.4:-66093555 | None:intergenic |
GTGTTAAGTTCCTGCGGGGT+TGG | 0.434060 | 1.4:+66095639 | MS.gene69912:CDS |
CTATTCATACCTTGATCTCT+GGG | 0.435238 | 1.4:-66092645 | None:intergenic |
GTTCCTGCGGGGTTGGAGTC+CGG | 0.440448 | 1.4:+66095646 | MS.gene69912:CDS |
CTTTCAAGACTCACATAAGC+TGG | 0.442324 | 1.4:-66092264 | None:intergenic |
CGACACCAGCACCGATCCCT+TGG | 0.442965 | 1.4:-66093561 | None:intergenic |
TTATGACAATACCTTTAGAT+TGG | 0.446097 | 1.4:-66098330 | None:intergenic |
GACCCTGCCAAAGGAATTGA+TGG | 0.448526 | 1.4:+66092330 | MS.gene69912:CDS |
GAGTTGATGCTTTGGTTGCA+GGG | 0.455243 | 1.4:+66092569 | MS.gene69912:CDS |
ACACCATCAATTCCTTTGGC+AGG | 0.457831 | 1.4:-66092333 | None:intergenic |
TGATACCAGCACCGATCCCT+TGG | 0.461638 | 1.4:-66098979 | None:intergenic |
AGAAGATCAACTTCCAGAAC+AGG | 0.462745 | 1.4:-66099007 | None:intergenic |
GTAGATCAACTTCCAGGATA+GGG | 0.464520 | 1.4:-66093588 | None:intergenic |
TGTAAATAACACCTTTGGAT+TGG | 0.472231 | 1.4:-66092427 | None:intergenic |
AAATTGATGCTTTGGTTGCA+GGG | 0.474338 | 1.4:+66098472 | MS.gene69912:CDS |
AAGCTGCTTGCCTTGAAAGA+AGG | 0.474497 | 1.4:+66093954 | MS.gene69912:CDS |
AAGCTGCTTGCCTTGAAAGA+AGG | 0.474497 | 1.4:+66099390 | MS.gene69912:CDS |
GCAGCTGCTGCAATTAAACT+AGG | 0.477493 | 1.4:+66099769 | MS.gene69912:CDS |
ATCTGGTGTTAAGTTCCTGC+GGG | 0.481927 | 1.4:+66095634 | MS.gene69912:CDS |
TGGTTGCAGGGATAGGAACT+GGG | 0.484341 | 1.4:+66092581 | MS.gene69912:CDS |
GGGGAACAGTAACAGGTGTT+GGG | 0.494810 | 1.4:+66092602 | MS.gene69912:CDS |
CGAATCCAAGGGATCGGTGC+TGG | 0.495485 | 1.4:+66098974 | MS.gene69912:CDS |
GTTCTGGATGGAGGAAAGTC+AGG | 0.498982 | 1.4:+66098671 | MS.gene69912:CDS |
GATGCTTTGGTTGCAGGGAT+AGG | 0.501960 | 1.4:+66092574 | MS.gene69912:CDS |
GATGCTTTGGTTGCAGGGAT+AGG | 0.501960 | 1.4:+66098477 | MS.gene69912:CDS |
AGTAGATCAACTTCCAGGAT+AGG | 0.502056 | 1.4:-66093589 | None:intergenic |
CCTGAGATTTGGAGAGACTC+TGG | 0.503327 | 1.4:+66098444 | MS.gene69912:CDS |
TTCAAGGTGGTGCTCGAACT+AGG | 0.503705 | 1.4:-66095612 | None:intergenic |
TGAAAATCCTGCCAATCTAA+AGG | 0.509713 | 1.4:+66098319 | MS.gene69912:CDS |
TCTGAAAGTGCAGTTCTGAA+TGG | 0.514085 | 1.4:+66092751 | MS.gene69912:CDS |
ATTGAAGATGCCGAGAGTAA+AGG | 0.514802 | 1.4:+66091728 | MS.gene69912:CDS |
CTAATCCAAGGGATCGGTGC+TGG | 0.516701 | 1.4:+66093556 | MS.gene69912:CDS |
TCCAGAACTGGACTTTCAGT+TGG | 0.517040 | 1.4:-66098656 | None:intergenic |
TTACCTTTCCAGGTGTAATG+AGG | 0.523442 | 1.4:-66091751 | None:intergenic |
GAGGAACAGTAACAGGTGTT+GGG | 0.527424 | 1.4:+66098505 | MS.gene69912:CDS |
AATAAAGGTCTCATTACTCC+GGG | 0.527860 | 1.4:+66097150 | MS.gene69912:CDS |
CTTCTTCAGCTAACGGCTTG+AGG | 0.527901 | 1.4:-66095551 | None:intergenic |
TAGATTCATTATGAGACCAC+TGG | 0.531764 | 1.4:+66098420 | MS.gene69912:intron |
GGAGGAACAGTAACAGGTGT+TGG | 0.532217 | 1.4:+66098504 | MS.gene69912:CDS |
AAAGGCAATCATCGAATCCA+AGG | 0.533837 | 1.4:+66098962 | MS.gene69912:intron |
TCCCTGACTTCTTCAGCTAA+CGG | 0.534676 | 1.4:-66095558 | None:intergenic |
GGAACTTAACACCAGATTCA+AGG | 0.538296 | 1.4:-66095628 | None:intergenic |
TTCAGAACTGCACTTTCAGA+TGG | 0.538348 | 1.4:-66092748 | None:intergenic |
GAATAAAGGTCTCATTACTC+CGG | 0.542326 | 1.4:+66097149 | MS.gene69912:CDS |
CCTGAGATTTGGAAAGACTC+TGG | 0.544001 | 1.4:+66092541 | MS.gene69912:CDS |
ACAAGTGGTAACACCGGCAT+AGG | 0.544602 | 1.4:+66092192 | MS.gene69912:CDS |
ACAAGTGGTAACACCGGCAT+AGG | 0.544602 | 1.4:+66098095 | MS.gene69912:CDS |
GTTCTGAATGGAGGAAAGCC+AGG | 0.546295 | 1.4:+66092763 | MS.gene69912:CDS |
TAGATTCATTACGAGACCAC+TGG | 0.548191 | 1.4:+66092517 | MS.gene69912:intron |
GGCGTCAATAGCAGCAATGA+GGG | 0.548478 | 1.4:+66092218 | MS.gene69912:CDS |
TGTAATGAGGCCTTTACTCT+CGG | 0.551658 | 1.4:-66091738 | None:intergenic |
CACCATCAATTCCTTTGGCA+GGG | 0.555618 | 1.4:-66092332 | None:intergenic |
GGCGTCGATAGCAGCAATGA+GGG | 0.558283 | 1.4:+66098121 | MS.gene69912:CDS |
TGGTAACACCGGCATAGGAT+TGG | 0.559661 | 1.4:+66092197 | MS.gene69912:CDS |
TGGTAACACCGGCATAGGAT+TGG | 0.559661 | 1.4:+66098100 | MS.gene69912:CDS |
AGGCCTCATTACACCTGGAA+AGG | 0.563587 | 1.4:+66091748 | MS.gene69912:CDS |
GGGAAGAGACCAGAAAATGC+AGG | 0.570015 | 1.4:+66094611 | MS.gene69912:CDS |
AGGTCTCATTACTCCGGGAA+AGG | 0.571702 | 1.4:+66097155 | MS.gene69912:CDS |
GGGAAGAGACCAGAAAATGT+AGG | 0.573068 | 1.4:+66099790 | MS.gene69912:CDS |
AAAGGCAAACACCTAATCCA+AGG | 0.576831 | 1.4:+66093544 | MS.gene69912:intron |
TAGATCAACTTCCAGGATAG+GGG | 0.577360 | 1.4:-66093587 | None:intergenic |
CAGCTGCTGCAATTAAACTA+GGG | 0.579559 | 1.4:+66099770 | MS.gene69912:CDS |
TATTGACGCCAATCCTATGC+CGG | 0.580423 | 1.4:-66092205 | None:intergenic |
GCCGTTAGCTGAAGAAGTCA+GGG | 0.587986 | 1.4:+66095557 | MS.gene69912:CDS |
AGTAAAGGCCTCATTACACC+TGG | 0.589255 | 1.4:+66091743 | MS.gene69912:CDS |
GTTCTTGTTGAGCCAACAAG+TGG | 0.593333 | 1.4:+66092177 | MS.gene69912:CDS |
AATCTGGTGTTAAGTTCCTG+CGG | 0.594012 | 1.4:+66095633 | MS.gene69912:CDS |
GTTCTTGTTGAGCCAACAAG+TGG | 0.594354 | 1.4:+66098080 | MS.gene69912:CDS |
TTTCCAAATCTCAGGGCCAG+TGG | 0.596982 | 1.4:-66092533 | None:intergenic |
TCTCCAAATCTCAGGGCCAG+TGG | 0.596982 | 1.4:-66098436 | None:intergenic |
TATCGACGCCAATCCTATGC+CGG | 0.597404 | 1.4:-66098108 | None:intergenic |
AGATTTGGAAAGACTCTGGA+GGG | 0.598831 | 1.4:+66092545 | MS.gene69912:CDS |
CAGAGTCTTTCCAAATCTCA+GGG | 0.601201 | 1.4:-66092540 | None:intergenic |
GAGATTTGGAGAGACTCTGG+AGG | 0.605051 | 1.4:+66098447 | MS.gene69912:CDS |
GAGTTTGGAACACTTCTCTG+TGG | 0.606419 | 1.4:+66095588 | MS.gene69912:CDS |
AATCATCGAATCCAAGGGAT+CGG | 0.608426 | 1.4:+66098968 | MS.gene69912:CDS |
CAGAGTCTCTCCAAATCTCA+GGG | 0.609348 | 1.4:-66098443 | None:intergenic |
GTACCGGACTCCAACCCCGC+AGG | 0.611438 | 1.4:-66095649 | None:intergenic |
TGAAAACTCTGCCAATCCAA+AGG | 0.611620 | 1.4:+66092416 | MS.gene69912:CDS |
ACTGAAAGTCCAGTTCTGGA+TGG | 0.616441 | 1.4:+66098659 | MS.gene69912:CDS |
GAGATTTGGAAAGACTCTGG+AGG | 0.616942 | 1.4:+66092544 | MS.gene69912:CDS |
ACTGCGAGCTTTCGGAGCCG+AGG | 0.618497 | 1.4:+66092296 | MS.gene69912:CDS |
TGGCGTCAATAGCAGCAATG+AGG | 0.618801 | 1.4:+66092217 | MS.gene69912:CDS |
TGGCGTCGATAGCAGCAATG+AGG | 0.618801 | 1.4:+66098120 | MS.gene69912:CDS |
AGATCAACTTCCAGAACAGG+AGG | 0.628629 | 1.4:-66099004 | None:intergenic |
AAACACCTAATCCAAGGGAT+CGG | 0.628864 | 1.4:+66093550 | MS.gene69912:CDS |
TATCTAACAGATCCTGCCAA+AGG | 0.634070 | 1.4:+66098224 | MS.gene69912:CDS |
AGATCAACTTCCAGGATAGG+GGG | 0.642892 | 1.4:-66093586 | None:intergenic |
AAGGCAAACACCTAATCCAA+GGG | 0.643306 | 1.4:+66093545 | MS.gene69912:intron |
AGGGTCTGTCAAATATACCT+CGG | 0.651115 | 1.4:-66092313 | None:intergenic |
AAGGCAATCATCGAATCCAA+GGG | 0.655977 | 1.4:+66098963 | MS.gene69912:intron |
GAAAGTCCAGTTCTGGATGG+AGG | 0.656019 | 1.4:+66098662 | MS.gene69912:CDS |
TATTTGACAGACCCTGCCAA+AGG | 0.662474 | 1.4:+66092321 | MS.gene69912:CDS |
AGGTGTTGGGAAGTTCCTCA+AGG | 0.665059 | 1.4:+66092615 | MS.gene69912:CDS |
AGATTTGGAGAGACTCTGGA+GGG | 0.665402 | 1.4:+66098448 | MS.gene69912:CDS |
GAAAGTGCAGTTCTGAATGG+AGG | 0.666727 | 1.4:+66092754 | MS.gene69912:CDS |
GGTTGCAGGGATAGGAACTG+GGG | 0.673121 | 1.4:+66092582 | MS.gene69912:CDS |
GAGCCAACAAGTGGTAACAC+CGG | 0.677684 | 1.4:+66092186 | MS.gene69912:CDS |
GAGCCAACAAGTGGTAACAC+CGG | 0.677684 | 1.4:+66098089 | MS.gene69912:CDS |
GTTGCAGGGATAGGAACTGG+AGG | 0.696987 | 1.4:+66098486 | MS.gene69912:CDS |
GCGTCAATAGCAGCAATGAG+GGG | 0.705710 | 1.4:+66092219 | MS.gene69912:CDS |
GCGTCGATAGCAGCAATGAG+GGG | 0.705710 | 1.4:+66098122 | MS.gene69912:CDS |
GTTGCAGGGATAGGAACTGG+GGG | 0.729118 | 1.4:+66092583 | MS.gene69912:CDS |
TCTGGTGTTAAGTTCCTGCG+GGG | 0.745019 | 1.4:+66095635 | MS.gene69912:CDS |
ACTTAACACCAGATTCAAGG+TGG | 0.760644 | 1.4:-66095625 | None:intergenic |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr1.4 | gene | 66091725 | 66099846 | 66091725 | ID=MS.gene69912 |
chr1.4 | mRNA | 66091725 | 66099846 | 66091725 | ID=MS.gene69912.t1;Parent=MS.gene69912 |
chr1.4 | exon | 66091725 | 66091769 | 66091725 | ID=MS.gene69912.t1.exon1;Parent=MS.gene69912.t1 |
chr1.4 | CDS | 66091725 | 66091769 | 66091725 | ID=cds.MS.gene69912.t1;Parent=MS.gene69912.t1 |
chr1.4 | exon | 66092174 | 66092437 | 66092174 | ID=MS.gene69912.t1.exon2;Parent=MS.gene69912.t1 |
chr1.4 | CDS | 66092174 | 66092437 | 66092174 | ID=cds.MS.gene69912.t1;Parent=MS.gene69912.t1 |
chr1.4 | exon | 66092520 | 66092657 | 66092520 | ID=MS.gene69912.t1.exon3;Parent=MS.gene69912.t1 |
chr1.4 | CDS | 66092520 | 66092657 | 66092520 | ID=cds.MS.gene69912.t1;Parent=MS.gene69912.t1 |
chr1.4 | exon | 66092733 | 66092784 | 66092733 | ID=MS.gene69912.t1.exon4;Parent=MS.gene69912.t1 |
chr1.4 | CDS | 66092733 | 66092784 | 66092733 | ID=cds.MS.gene69912.t1;Parent=MS.gene69912.t1 |
chr1.4 | exon | 66093548 | 66093627 | 66093548 | ID=MS.gene69912.t1.exon5;Parent=MS.gene69912.t1 |
chr1.4 | CDS | 66093548 | 66093627 | 66093548 | ID=cds.MS.gene69912.t1;Parent=MS.gene69912.t1 |
chr1.4 | exon | 66093924 | 66093983 | 66093924 | ID=MS.gene69912.t1.exon6;Parent=MS.gene69912.t1 |
chr1.4 | CDS | 66093924 | 66093983 | 66093924 | ID=cds.MS.gene69912.t1;Parent=MS.gene69912.t1 |
chr1.4 | exon | 66094566 | 66094646 | 66094566 | ID=MS.gene69912.t1.exon7;Parent=MS.gene69912.t1 |
chr1.4 | CDS | 66094566 | 66094646 | 66094566 | ID=cds.MS.gene69912.t1;Parent=MS.gene69912.t1 |
chr1.4 | exon | 66095537 | 66095667 | 66095537 | ID=MS.gene69912.t1.exon8;Parent=MS.gene69912.t1 |
chr1.4 | CDS | 66095537 | 66095667 | 66095537 | ID=cds.MS.gene69912.t1;Parent=MS.gene69912.t1 |
chr1.4 | exon | 66097119 | 66097176 | 66097119 | ID=MS.gene69912.t1.exon9;Parent=MS.gene69912.t1 |
chr1.4 | CDS | 66097119 | 66097176 | 66097119 | ID=cds.MS.gene69912.t1;Parent=MS.gene69912.t1 |
chr1.4 | exon | 66098077 | 66098340 | 66098077 | ID=MS.gene69912.t1.exon10;Parent=MS.gene69912.t1 |
chr1.4 | CDS | 66098077 | 66098340 | 66098077 | ID=cds.MS.gene69912.t1;Parent=MS.gene69912.t1 |
chr1.4 | exon | 66098423 | 66098560 | 66098423 | ID=MS.gene69912.t1.exon11;Parent=MS.gene69912.t1 |
chr1.4 | CDS | 66098423 | 66098560 | 66098423 | ID=cds.MS.gene69912.t1;Parent=MS.gene69912.t1 |
chr1.4 | exon | 66098641 | 66098692 | 66098641 | ID=MS.gene69912.t1.exon12;Parent=MS.gene69912.t1 |
chr1.4 | CDS | 66098641 | 66098692 | 66098641 | ID=cds.MS.gene69912.t1;Parent=MS.gene69912.t1 |
chr1.4 | exon | 66098966 | 66099045 | 66098966 | ID=MS.gene69912.t1.exon13;Parent=MS.gene69912.t1 |
chr1.4 | CDS | 66098966 | 66099045 | 66098966 | ID=cds.MS.gene69912.t1;Parent=MS.gene69912.t1 |
chr1.4 | exon | 66099360 | 66099419 | 66099360 | ID=MS.gene69912.t1.exon14;Parent=MS.gene69912.t1 |
chr1.4 | CDS | 66099360 | 66099419 | 66099360 | ID=cds.MS.gene69912.t1;Parent=MS.gene69912.t1 |
chr1.4 | exon | 66099745 | 66099846 | 66099745 | ID=MS.gene69912.t1.exon15;Parent=MS.gene69912.t1 |
chr1.4 | CDS | 66099745 | 66099846 | 66099745 | ID=cds.MS.gene69912.t1;Parent=MS.gene69912.t1 |
Gene Sequence |
Protein sequence |