AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene69959

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69959.t1 MTR_3g479520 81.967 488 40 1 1 440 1 488 0.0 817
MS.gene69959.t1 MTR_3g079480 73.402 485 80 2 4 440 11 494 0.0 727
MS.gene69959.t1 MTR_3g479490 68.697 476 101 1 12 439 3 478 0.0 689
MS.gene69959.t1 MTR_3g479470 56.184 477 160 2 12 440 10 485 0.0 525
MS.gene69959.t1 MTR_3g479610 70.126 318 47 1 171 440 1 318 1.48e-156 446
MS.gene69959.t1 MTR_0891s0010 73.559 295 30 1 194 440 1 295 2.37e-153 436
MS.gene69959.t1 MTR_5g464810 45.378 476 206 6 10 435 7 478 1.35e-150 436
MS.gene69959.t1 MTR_5g064240 45.378 476 206 6 10 435 7 478 1.35e-150 436
MS.gene69959.t1 MTR_0036s0220 44.748 476 209 6 10 435 7 478 2.70e-145 423
MS.gene69959.t1 MTR_5g464760 44.235 477 210 7 11 435 8 480 1.16e-144 421
MS.gene69959.t1 MTR_2g008210 43.215 479 216 6 12 439 8 481 1.12e-140 411
MS.gene69959.t1 MTR_6g014186 45.351 441 223 5 10 435 2 439 1.98e-140 409
MS.gene69959.t1 MTR_3g008010 42.918 473 218 4 13 435 8 478 6.07e-140 409
MS.gene69959.t1 MTR_6g014250 42.227 476 223 4 10 435 5 478 4.20e-139 407
MS.gene69959.t1 MTR_6g014290 42.437 476 222 4 10 435 5 478 1.58e-138 406
MS.gene69959.t1 MTR_6g014270 43.659 481 213 5 10 435 2 479 1.32e-137 404
MS.gene69959.t1 MTR_6g014040 42.650 483 220 6 7 435 2 481 2.47e-136 400
MS.gene69959.t1 MTR_6g014220 43.067 476 219 5 10 435 5 478 1.31e-134 396
MS.gene69959.t1 MTR_6g014150 43.424 479 215 5 10 435 2 477 8.63e-133 391
MS.gene69959.t1 MTR_6g013440 42.138 477 220 5 12 435 8 481 3.00e-132 390
MS.gene69959.t1 MTR_6g014020 40.249 482 232 5 7 435 2 480 2.51e-129 382
MS.gene69959.t1 MTR_6g014310 42.857 476 216 5 13 435 9 481 1.62e-128 380
MS.gene69959.t1 MTR_6g013450 41.408 483 226 6 7 435 2 481 1.22e-126 375
MS.gene69959.t1 MTR_6g014050 43.908 476 211 6 13 435 9 481 1.71e-126 375
MS.gene69959.t1 MTR_8g059425 40.417 480 232 4 7 435 2 478 5.75e-126 374
MS.gene69959.t1 MTR_0288s0020 41.042 480 206 5 10 435 5 461 7.58e-126 373
MS.gene69959.t1 MTR_6g014200 42.380 479 220 5 10 435 2 477 1.08e-125 373
MS.gene69959.t1 MTR_4g094220 39.121 478 239 3 13 438 5 482 4.62e-125 371
MS.gene69959.t1 MTR_6g014300 41.042 480 211 6 9 435 6 466 2.13e-124 369
MS.gene69959.t1 MTR_6g011340 41.079 482 228 5 7 435 2 480 1.73e-122 365
MS.gene69959.t1 MTR_6g014187 40.377 478 229 5 11 435 6 480 1.33e-121 363
MS.gene69959.t1 MTR_6g014170 40.126 476 217 6 10 435 5 462 1.95e-120 359
MS.gene69959.t1 MTR_6g013990 41.632 478 221 7 11 435 6 478 8.83e-120 358
MS.gene69959.t1 MTR_5g058320 40.000 480 221 7 7 435 2 465 7.62e-116 347
MS.gene69959.t1 MTR_6g013960 37.967 482 243 5 7 435 2 480 1.41e-115 347
MS.gene69959.t1 MTR_6g013900 39.709 481 235 5 7 435 2 479 5.11e-115 346
MS.gene69959.t1 MTR_7g011470 40.000 480 218 6 12 438 7 469 5.82e-115 345
MS.gene69959.t1 MTR_7g011470 39.583 480 216 6 12 438 7 465 1.91e-113 341
MS.gene69959.t1 MTR_6g013920 37.654 486 248 5 7 440 2 484 2.82e-111 336
MS.gene69959.t1 MTR_6g014240 39.158 475 207 8 12 435 4 447 1.67e-110 333
MS.gene69959.t1 MTR_3g479620 85.276 163 24 0 12 174 3 165 6.59e-102 301
MS.gene69959.t1 MTR_6g013680 42.147 382 205 6 61 435 3 375 4.18e-99 301
MS.gene69959.t1 MTR_8g043470 33.732 418 175 6 68 435 13 378 1.17e-75 241
MS.gene69959.t1 MTR_0199s0010 45.643 241 128 2 10 248 5 244 3.43e-74 234
MS.gene69959.t1 MTR_6g013435 39.806 309 180 3 131 435 1 307 5.34e-74 234
MS.gene69959.t1 MTR_6g014160 34.653 404 205 10 52 435 29 393 2.35e-66 218
MS.gene69959.t1 MTR_2086s0010 60.795 176 21 1 312 439 1 176 1.81e-65 208
MS.gene69959.t1 MTR_1996s0010 60.795 176 21 1 312 439 1 176 1.81e-65 208
MS.gene69959.t1 MTR_6g014190 39.310 290 125 3 194 435 1 287 2.78e-64 209
MS.gene69959.t1 MTR_0477s0010 34.375 352 145 4 133 435 3 317 1.92e-62 205
MS.gene69959.t1 MTR_6g014195 51.309 191 88 2 10 195 5 195 4.94e-59 192
MS.gene69959.t1 MTR_8g007585 47.312 186 95 2 10 193 5 189 5.01e-56 190
MS.gene69959.t1 MTR_8g007585 40.000 205 74 2 279 435 189 392 2.12e-42 154
MS.gene69959.t1 MTR_5g031860 29.388 490 258 14 8 434 5 469 2.12e-55 191
MS.gene69959.t1 MTR_5g031840 28.247 485 261 11 12 434 2 461 5.83e-54 187
MS.gene69959.t1 MTR_3g069710 28.692 474 256 11 17 439 14 456 1.12e-53 186
MS.gene69959.t1 MTR_3g069690 28.511 470 256 12 17 435 10 450 4.43e-52 182
MS.gene69959.t1 MTR_5g031830 28.367 490 264 13 8 434 5 470 4.74e-49 174
MS.gene69959.t1 MTR_6g013890 35.656 244 121 6 171 400 19 240 8.13e-47 162
MS.gene69959.t1 MTR_4g064987 27.778 486 259 14 11 439 4 454 1.91e-44 161
MS.gene69959.t1 MTR_5g035560 25.519 482 260 13 15 436 11 453 1.25e-43 160
MS.gene69959.t1 MTR_6g038240 25.410 488 266 13 12 438 8 458 2.61e-43 158
MS.gene69959.t1 MTR_6g038300 25.413 484 266 13 11 434 7 455 3.67e-42 155
MS.gene69959.t1 MTR_5g035580 25.367 477 257 12 15 431 13 450 4.08e-42 155
MS.gene69959.t1 MTR_4g064987 27.366 486 255 14 11 439 4 448 1.95e-41 153
MS.gene69959.t1 MTR_7g013220 27.557 479 251 16 14 431 4 447 6.35e-41 151
MS.gene69959.t1 MTR_7g013260 28.243 478 238 18 14 431 5 437 2.42e-40 150
MS.gene69959.t1 MTR_8g064870 24.187 492 284 15 9 434 5 473 7.28e-40 149
MS.gene69959.t1 MTR_0475s0020 51.471 136 60 2 7 136 2 137 1.56e-39 141
MS.gene69959.t1 MTR_7g080940 24.638 483 268 13 13 436 9 454 3.74e-39 147
MS.gene69959.t1 MTR_7g013240 26.964 471 252 12 14 431 5 436 5.54e-39 146
MS.gene69959.t1 MTR_7g013180 25.370 473 249 15 14 420 4 438 6.87e-39 146
MS.gene69959.t1 MTR_8g088560 24.635 479 271 14 15 434 10 457 5.13e-38 144
MS.gene69959.t1 MTR_7g013200 25.902 471 258 15 14 431 4 436 6.30e-38 143
MS.gene69959.t1 MTR_7g080950 23.505 485 275 13 11 436 2 449 3.18e-37 141
MS.gene69959.t1 MTR_6g038230 23.958 480 275 13 15 437 11 457 5.81e-37 140
MS.gene69959.t1 MTR_3g049970 22.541 488 295 12 15 440 9 475 2.97e-36 139
MS.gene69959.t1 MTR_6g038220 25.726 482 267 13 7 431 3 450 5.68e-36 138
MS.gene69959.t1 MTR_6g038200 25.000 476 263 13 15 431 11 451 8.43e-36 137
MS.gene69959.t1 MTR_1g107350 22.153 483 291 12 15 434 8 468 1.64e-35 137
MS.gene69959.t1 MTR_7g080935 22.965 479 281 11 13 436 9 454 8.21e-35 135
MS.gene69959.t1 MTR_1g107380 23.374 492 293 13 7 435 3 473 1.34e-33 132
MS.gene69959.t1 MTR_4g485630 25.203 492 275 14 12 434 6 473 7.24e-33 130
MS.gene69959.t1 MTR_5g072860 26.582 474 272 15 15 436 18 467 1.09e-32 129
MS.gene69959.t1 MTR_1g107315 22.727 484 297 12 10 434 3 468 1.61e-32 129
MS.gene69959.t1 MTR_1g032490 23.469 490 288 15 15 440 10 476 1.69e-32 129
MS.gene69959.t1 MTR_1g107285 23.000 500 269 16 17 440 10 469 3.94e-32 127
MS.gene69959.t1 MTR_1g107375 22.407 482 284 15 15 438 8 457 5.05e-32 127
MS.gene69959.t1 MTR_6g014185 27.160 405 194 13 52 435 21 345 3.13e-31 123
MS.gene69959.t1 MTR_1g107365 21.946 483 284 15 15 437 45 494 6.08e-31 124
MS.gene69959.t1 MTR_5g016480 23.482 494 285 14 10 435 3 471 1.79e-30 123
MS.gene69959.t1 MTR_8g064880 22.698 467 276 13 9 409 3 450 5.03e-30 122
MS.gene69959.t1 MTR_5g072810 25.793 473 267 18 15 434 12 453 1.87e-29 120
MS.gene69959.t1 MTR_5g087620 27.041 392 239 13 10 377 5 373 1.44e-28 117
MS.gene69959.t1 MTR_8g083290 23.984 492 275 15 14 435 2 464 3.66e-28 116
MS.gene69959.t1 MTR_1g107360 21.084 498 278 15 17 440 11 467 1.53e-27 114
MS.gene69959.t1 MTR_4g094920 23.722 489 283 15 10 435 19 480 3.00e-27 114
MS.gene69959.t1 MTR_7g080900 21.849 476 288 11 15 436 12 457 1.33e-26 111
MS.gene69959.t1 MTR_5g072830 24.274 482 260 15 15 434 10 448 2.03e-26 111
MS.gene69959.t1 MTR_5g075440 23.909 481 274 14 15 436 10 457 2.79e-26 110
MS.gene69959.t1 MTR_4g128720 21.803 477 286 13 12 434 12 455 5.25e-25 107
MS.gene69959.t1 MTR_4g095008 25.815 368 239 13 15 375 11 351 9.31e-25 107
MS.gene69959.t1 MTR_3g031400 24.635 479 273 16 7 435 10 450 1.52e-24 105
MS.gene69959.t1 MTR_8g066610 28.219 365 230 13 10 362 3 347 1.77e-24 105
MS.gene69959.t1 MTR_3g031450 23.722 489 267 16 7 435 10 452 3.34e-24 105
MS.gene69959.t1 MTR_5g072820 25.052 483 255 17 15 434 10 448 1.16e-23 103
MS.gene69959.t1 MTR_5g072840 24.224 483 261 15 15 435 10 449 1.79e-23 102
MS.gene69959.t1 MTR_8g012745 22.118 425 235 9 73 423 55 457 3.13e-23 102
MS.gene69959.t1 MTR_3g084530 24.198 343 229 11 12 344 3 324 4.36e-23 101
MS.gene69959.t1 MTR_5g098960 23.677 359 240 11 12 365 4 333 6.46e-22 98.2
MS.gene69959.t1 MTR_5g066390 34.591 159 55 2 325 435 58 215 9.69e-22 93.6
MS.gene69959.t1 MTR_3g084520 25.000 336 219 12 12 336 3 316 1.01e-21 97.8
MS.gene69959.t1 MTR_4g128690 22.622 473 278 15 15 434 15 452 1.18e-21 97.4
MS.gene69959.t1 MTR_5g045960 24.008 504 282 18 15 439 9 490 1.27e-21 97.4
MS.gene69959.t1 MTR_7g070660 25.405 370 233 13 7 362 3 343 1.57e-21 97.1
MS.gene69959.t1 MTR_8g009055 23.232 495 263 18 15 430 6 462 2.62e-21 96.3
MS.gene69959.t1 MTR_7g117405 26.099 364 218 13 14 360 11 340 5.07e-21 95.5
MS.gene69959.t1 MTR_4g031800 24.145 497 272 18 10 431 3 469 5.58e-21 95.5
MS.gene69959.t1 MTR_3g084540 24.419 344 221 13 12 341 3 321 1.85e-20 94.0
MS.gene69959.t1 MTR_8g009063 21.616 495 271 16 15 430 13 469 3.96e-20 92.8
MS.gene69959.t1 MTR_4g485590 25.419 358 208 9 15 362 9 317 5.02e-20 92.0
MS.gene69959.t1 MTR_7g070910 26.400 375 229 14 7 362 3 349 5.63e-20 92.4
MS.gene69959.t1 MTR_7g047030 21.600 500 273 17 15 434 6 466 8.63e-20 92.0
MS.gene69959.t1 MTR_7g047270 21.600 500 273 17 15 434 6 466 8.63e-20 92.0
MS.gene69959.t1 MTR_7g070610 25.668 374 242 13 1 362 1 350 1.02e-19 91.7
MS.gene69959.t1 MTR_6g033725 23.562 365 189 12 130 430 119 457 1.69e-19 90.9
MS.gene69959.t1 MTR_8g009073 23.422 491 265 18 15 430 6 460 1.86e-19 90.9
MS.gene69959.t1 MTR_0184s0030 21.667 480 276 14 15 423 6 456 2.82e-19 90.5
MS.gene69959.t1 MTR_7g102450 24.581 358 228 13 14 362 10 334 3.08e-19 90.1
MS.gene69959.t1 MTR_8g008990 22.041 490 277 16 15 430 6 464 3.23e-19 90.1
MS.gene69959.t1 MTR_7g102550 25.323 387 243 14 7 377 2 358 3.93e-19 90.1
MS.gene69959.t1 MTR_1g062380 23.370 368 244 13 15 367 16 360 6.60e-19 89.4
MS.gene69959.t1 MTR_5g090660 23.483 511 275 17 12 440 2 478 7.52e-19 89.4
MS.gene69959.t1 MTR_8g465670 26.329 395 216 17 11 377 3 350 9.39e-19 88.6
MS.gene69959.t1 MTR_6g033625 21.996 491 274 15 17 432 6 462 9.72e-19 88.6
MS.gene69959.t1 MTR_6g036650 27.128 376 224 16 15 377 18 356 1.03e-18 88.6
MS.gene69959.t1 MTR_7g071040 24.518 363 251 10 7 362 9 355 1.22e-18 88.6
MS.gene69959.t1 MTR_8g009050 22.336 488 276 17 15 430 6 462 1.24e-18 88.2
MS.gene69959.t1 MTR_7g055710 23.433 367 249 10 7 362 3 348 1.28e-18 88.6
MS.gene69959.t1 MTR_1g019510 22.587 487 273 16 15 430 6 459 1.47e-18 88.2
MS.gene69959.t1 MTR_8g012635 23.364 428 229 11 73 423 55 460 1.61e-18 88.2
MS.gene69959.t1 MTR_8g012650 24.156 385 199 11 121 434 109 471 1.73e-18 87.8
MS.gene69959.t1 MTR_8g068340 26.757 370 236 14 15 377 12 353 4.09e-18 86.7
MS.gene69959.t1 MTR_5g045970 24.796 367 236 16 15 365 16 358 4.86e-18 86.7
MS.gene69959.t1 MTR_7g070740 23.925 372 241 13 7 362 3 348 8.75e-18 85.9
MS.gene69959.t1 MTR_8g077590 25.667 300 183 10 81 366 72 345 9.38e-18 85.5
MS.gene69959.t1 MTR_0184s0040 22.535 497 269 18 15 433 21 479 1.06e-17 85.5
MS.gene69959.t1 MTR_0078s0190 22.535 497 269 18 15 433 21 479 1.06e-17 85.5
MS.gene69959.t1 MTR_8g009067 23.313 489 270 17 15 431 6 461 1.49e-17 85.1
MS.gene69959.t1 MTR_2g008225 27.467 375 222 15 15 377 15 351 1.80e-17 84.7
MS.gene69959.t1 MTR_1g029540 20.041 484 275 16 20 434 19 459 2.06e-17 84.7
MS.gene69959.t1 MTR_4g485620 27.714 350 209 16 29 362 3 324 2.34e-17 84.3
MS.gene69959.t1 MTR_8g008970 22.131 488 275 16 15 430 6 460 2.58e-17 85.1
MS.gene69959.t1 MTR_6g042310 27.072 362 210 15 15 362 18 339 3.17e-17 84.0
MS.gene69959.t1 MTR_5g016660 25.393 382 234 15 9 371 4 353 3.33e-17 84.0
MS.gene69959.t1 MTR_7g070780 25.538 372 219 14 15 362 11 348 4.07e-17 84.0
MS.gene69959.t1 MTR_7g117170 24.089 494 274 17 8 430 8 471 6.06e-17 83.2
MS.gene69959.t1 MTR_5g090670 23.123 506 279 16 12 436 2 478 6.45e-17 83.2
MS.gene69959.t1 MTR_4g108250 24.202 376 239 13 7 362 3 352 7.33e-17 83.2
MS.gene69959.t1 MTR_7g102520 25.066 379 238 16 7 365 4 356 8.63e-17 82.8
MS.gene69959.t1 MTR_5g090620 22.179 514 275 14 12 437 2 478 8.81e-17 82.8
MS.gene69959.t1 MTR_5g098930 23.107 515 261 20 12 437 2 470 1.29e-16 82.0
MS.gene69959.t1 MTR_6g035295 25.000 328 222 8 16 336 13 323 1.96e-16 81.6
MS.gene69959.t1 MTR_6g005600 23.529 493 259 18 11 423 2 456 2.13e-16 81.6
MS.gene69959.t1 MTR_6g023665 24.289 387 233 13 11 377 9 355 2.25e-16 81.6
MS.gene69959.t1 MTR_2g034990 25.904 332 200 11 18 335 14 313 3.41e-16 80.9
MS.gene69959.t1 MTR_2g046620 26.357 387 235 15 1 377 1 347 3.43e-16 80.9
MS.gene69959.t1 MTR_5g039900 23.476 328 228 8 17 338 15 325 3.51e-16 80.9
MS.gene69959.t1 MTR_2g035020 25.000 332 219 8 10 335 6 313 3.54e-16 80.9
MS.gene69959.t1 MTR_5g004940 27.027 185 99 4 286 434 193 377 3.68e-16 80.5
MS.gene69959.t1 MTR_5g004940 30.769 156 90 5 15 162 17 162 1.30e-11 66.2
MS.gene69959.t1 MTR_5g040030 24.370 357 240 10 17 362 16 353 3.68e-16 80.9
MS.gene69959.t1 MTR_5g090630 27.559 381 205 18 12 365 2 338 3.78e-16 80.9
MS.gene69959.t1 MTR_6g033615 22.460 374 191 11 125 433 113 452 4.88e-16 80.5
MS.gene69959.t1 MTR_7g067330 26.254 339 185 15 12 339 6 290 6.72e-16 79.7
MS.gene69959.t1 MTR_6g488280 20.978 491 285 13 11 430 2 460 7.66e-16 79.7
MS.gene69959.t1 MTR_0428s0010 20.978 491 285 13 11 430 2 460 7.66e-16 79.7
MS.gene69959.t1 MTR_8g006270 23.016 378 228 15 11 364 2 340 8.66e-16 79.7
MS.gene69959.t1 MTR_5g090650 25.469 373 199 14 12 365 2 314 9.52e-16 78.2
MS.gene69959.t1 MTR_8g009067 23.889 360 185 12 138 431 7 343 1.12e-15 78.6
MS.gene69959.t1 MTR_1g107340 25.100 251 167 8 17 261 10 245 1.38e-15 76.6
MS.gene69959.t1 MTR_4g117980 25.072 347 223 11 18 352 14 335 1.40e-15 79.0
MS.gene69959.t1 MTR_8g006730 21.181 491 284 14 12 430 3 462 1.45e-15 79.0
MS.gene69959.t1 MTR_1g107325 21.739 437 233 17 15 434 8 352 1.47e-15 78.2
MS.gene69959.t1 MTR_6g033660 22.105 380 208 9 113 430 106 459 1.69e-15 79.0
MS.gene69959.t1 MTR_0078s0010 21.200 500 275 18 15 434 6 466 2.11e-15 78.6
MS.gene69959.t1 MTR_6g033675 21.311 488 277 17 17 430 6 460 2.49e-15 78.2
MS.gene69959.t1 MTR_8g006220 24.750 400 224 16 11 377 2 357 3.24e-15 77.8
MS.gene69959.t1 MTR_8g009073 24.042 287 140 8 210 430 57 331 3.70e-15 76.6
MS.gene69959.t1 MTR_0078s0200 22.492 329 219 9 15 336 6 305 3.88e-15 76.3
MS.gene69959.t1 MTR_8g071070 23.846 390 244 14 10 377 2 360 5.60e-15 77.0
MS.gene69959.t1 MTR_5g029800 24.383 324 211 10 18 335 14 309 1.09e-14 76.3
MS.gene69959.t1 MTR_7g046490 21.271 362 193 8 137 431 124 460 1.12e-14 76.3
MS.gene69959.t1 MTR_7g070940 22.004 509 269 18 12 434 6 472 1.33e-14 75.9
MS.gene69959.t1 MTR_8g006260 22.311 502 270 18 11 430 2 465 2.58e-14 75.1
MS.gene69959.t1 MTR_5g090610 22.368 380 221 13 12 365 2 333 2.77e-14 75.1
MS.gene69959.t1 MTR_0078s0060 22.133 497 273 18 15 434 6 465 4.44e-14 74.3
MS.gene69959.t1 MTR_8g006710 21.996 491 279 16 12 430 3 461 5.04e-14 74.3
MS.gene69959.t1 MTR_4g008630 18.571 490 284 14 17 434 16 462 7.72e-14 73.6
MS.gene69959.t1 MTR_3g009510 21.643 499 277 16 17 432 7 474 7.87e-14 73.6
MS.gene69959.t1 MTR_8g027885 22.727 374 243 11 7 366 10 351 1.39e-13 72.8
MS.gene69959.t1 MTR_8g027870 22.460 374 244 11 7 366 10 351 4.46e-13 71.2
MS.gene69959.t1 MTR_8g068330 26.005 373 235 15 15 377 8 349 1.18e-12 70.1
MS.gene69959.t1 MTR_4g082810 22.541 244 162 6 136 370 124 349 4.68e-12 67.8
MS.gene69959.t1 MTR_2g035040 23.552 259 169 7 113 362 13 251 5.52e-12 67.4
MS.gene69959.t1 MTR_8g074550 22.965 344 221 12 1 336 1 308 8.66e-12 67.4
MS.gene69959.t1 MTR_4g082820 23.016 378 232 14 15 370 7 347 2.60e-11 65.9
MS.gene69959.t1 MTR_4g485640 24.845 322 193 14 25 335 219 502 4.22e-11 65.5
MS.gene69959.t1 MTR_7g080960 24.255 235 155 6 15 248 12 224 5.52e-11 64.7
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene69959.t1 AT1G22380 42.767 477 223 3 11 438 9 484 2.33e-141 413
MS.gene69959.t1 AT1G22360 42.227 476 225 4 9 435 4 478 1.46e-140 411
MS.gene69959.t1 AT1G22340 40.546 476 234 2 9 435 7 482 4.84e-140 410
MS.gene69959.t1 AT1G22400 41.300 477 229 4 9 435 7 482 3.62e-137 402
MS.gene69959.t1 AT1G22370 42.827 474 214 6 12 435 10 476 4.52e-135 397
MS.gene69959.t1 AT1G22360 42.026 464 231 4 9 435 4 466 1.36e-133 393
MS.gene69959.t1 AT1G78270 39.496 476 236 5 10 435 8 481 8.36e-121 361
MS.gene69959.t1 AT1G22370 37.582 306 139 5 180 435 3 306 1.29e-60 200
MS.gene69959.t1 AT5G59590 29.958 474 234 14 17 431 12 446 5.34e-51 179
MS.gene69959.t1 AT3G46660 29.106 481 246 13 11 431 7 452 3.25e-50 177
MS.gene69959.t1 AT5G59580 28.601 479 247 13 13 434 7 447 3.53e-50 176
MS.gene69959.t1 AT3G46670 27.536 483 249 14 11 431 2 445 3.94e-48 171
MS.gene69959.t1 AT2G36970 26.337 486 275 13 11 434 6 470 7.80e-48 171
MS.gene69959.t1 AT3G46680 27.696 473 259 14 11 431 5 446 1.68e-47 169
MS.gene69959.t1 AT3G46690 28.270 474 255 12 12 432 6 447 3.34e-47 168
MS.gene69959.t1 AT2G28080 32.011 353 214 9 19 365 22 354 3.98e-46 166
MS.gene69959.t1 AT5G38040 27.646 463 247 13 24 432 19 447 7.31e-46 165
MS.gene69959.t1 AT5G38010 26.205 477 266 11 11 432 6 451 9.03e-46 165
MS.gene69959.t1 AT3G46650 27.004 474 241 11 11 430 6 428 2.24e-45 163
MS.gene69959.t1 AT3G46700 26.875 480 253 13 12 434 6 444 2.94e-45 163
MS.gene69959.t1 AT3G21560 26.295 502 270 15 1 434 3 472 7.94e-45 163
MS.gene69959.t1 AT3G11340 26.737 475 264 10 11 435 5 445 1.09e-43 159
MS.gene69959.t1 AT5G05880 24.736 473 271 10 15 434 8 448 1.15e-42 156
MS.gene69959.t1 AT5G05890 25.738 474 263 10 15 431 8 449 2.42e-41 153
MS.gene69959.t1 AT3G02100 26.834 477 260 18 13 431 11 456 1.25e-39 148
MS.gene69959.t1 AT4G15500 24.694 490 277 15 14 440 8 468 3.51e-39 147
MS.gene69959.t1 AT4G15490 25.605 496 272 15 6 435 3 467 5.09e-39 147
MS.gene69959.t1 AT3G46720 26.160 474 254 11 12 431 6 437 5.45e-39 146
MS.gene69959.t1 AT4G15480 24.540 489 286 13 6 434 13 478 2.95e-38 145
MS.gene69959.t1 AT5G05900 24.268 478 268 11 16 436 9 449 3.01e-38 144
MS.gene69959.t1 AT3G55710 25.847 472 271 13 17 435 10 455 6.56e-37 140
MS.gene69959.t1 AT2G43820 24.486 486 263 14 11 434 3 446 9.64e-37 140
MS.gene69959.t1 AT5G05870 23.368 475 281 10 15 434 8 454 2.69e-36 139
MS.gene69959.t1 AT3G55700 24.628 471 274 12 17 435 10 451 1.07e-34 134
MS.gene69959.t1 AT2G26480 24.532 481 267 12 12 435 5 446 1.96e-34 134
MS.gene69959.t1 AT2G43840 23.663 486 267 14 11 434 3 446 1.98e-34 134
MS.gene69959.t1 AT2G43840 23.663 486 267 14 11 434 3 446 3.12e-34 133
MS.gene69959.t1 AT2G31790 25.103 486 261 15 12 431 5 453 1.47e-33 131
MS.gene69959.t1 AT2G31750 24.280 486 275 14 11 436 4 456 4.81e-33 130
MS.gene69959.t1 AT5G05860 24.370 476 269 11 15 435 9 448 6.87e-33 129
MS.gene69959.t1 AT2G31750 24.280 486 275 14 11 436 4 456 1.11e-32 129
MS.gene69959.t1 AT1G05680 25.577 477 270 13 11 431 2 449 4.23e-32 127
MS.gene69959.t1 AT1G05675 24.109 477 277 13 11 431 2 449 1.12e-31 126
MS.gene69959.t1 AT2G23250 25.630 476 254 18 18 434 1 435 9.82e-31 123
MS.gene69959.t1 AT5G17040 23.529 476 269 13 15 435 5 440 1.19e-29 120
MS.gene69959.t1 AT5G37950 28.824 340 206 8 30 365 1 308 1.38e-29 118
MS.gene69959.t1 AT5G37950 28.909 339 201 8 30 365 1 302 1.41e-29 118
MS.gene69959.t1 AT4G34131 28.831 385 211 14 5 362 2 350 2.18e-29 120
MS.gene69959.t1 AT5G17050 23.045 486 288 14 6 436 4 458 2.19e-29 119
MS.gene69959.t1 AT1G30530 23.418 474 273 14 16 435 14 451 5.53e-29 118
MS.gene69959.t1 AT2G23260 24.738 477 275 17 12 434 7 453 8.03e-28 115
MS.gene69959.t1 AT2G36750 29.235 366 220 13 15 365 10 351 2.32e-26 111
MS.gene69959.t1 AT2G30140 24.230 487 269 19 7 434 6 451 4.90e-26 110
MS.gene69959.t1 AT2G30140 24.025 487 269 17 7 434 6 450 6.91e-26 109
MS.gene69959.t1 AT4G34135 27.105 380 221 11 7 362 3 350 8.48e-26 109
MS.gene69959.t1 AT1G24100 23.482 494 262 18 13 434 9 458 1.12e-25 109
MS.gene69959.t1 AT5G17040 25.559 313 168 6 173 435 41 338 1.74e-25 107
MS.gene69959.t1 AT2G15480 23.447 499 295 11 9 438 4 484 2.10e-25 108
MS.gene69959.t1 AT2G30150 24.033 491 277 16 1 434 1 452 6.98e-25 107
MS.gene69959.t1 AT4G15550 23.092 498 268 17 14 433 12 472 1.00e-24 106
MS.gene69959.t1 AT2G15490 24.200 500 278 15 11 434 3 477 1.28e-24 106
MS.gene69959.t1 AT1G10400 25.203 492 272 18 12 437 4 465 1.79e-24 105
MS.gene69959.t1 AT4G34135 26.062 353 209 9 7 336 3 326 5.11e-24 102
MS.gene69959.t1 AT2G15480 23.183 509 294 12 9 438 4 494 5.66e-24 104
MS.gene69959.t1 AT2G15490 24.254 503 277 16 11 434 3 480 8.42e-24 103
MS.gene69959.t1 AT5G26310 25.000 504 253 20 13 433 5 466 1.01e-23 103
MS.gene69959.t1 AT5G17030 22.653 490 284 17 6 436 4 457 1.32e-23 103
MS.gene69959.t1 AT2G30150 23.890 473 266 15 19 434 1 436 2.99e-23 102
MS.gene69959.t1 AT5G66690 26.893 383 208 14 13 365 5 345 1.11e-21 97.8
MS.gene69959.t1 AT1G05560 21.573 496 278 15 14 440 4 457 1.62e-21 97.1
MS.gene69959.t1 AT1G05560 21.442 513 288 16 1 440 37 507 1.75e-21 97.4
MS.gene69959.t1 AT2G36800 26.667 390 236 16 7 377 3 361 1.19e-20 94.7
MS.gene69959.t1 AT3G22250 26.133 375 225 13 12 365 5 348 1.33e-20 94.4
MS.gene69959.t1 AT3G53150 24.933 373 230 13 12 362 19 363 9.08e-20 92.0
MS.gene69959.t1 AT3G53160 25.348 359 237 9 15 362 8 346 1.76e-19 91.3
MS.gene69959.t1 AT1G05530 20.697 488 287 14 13 435 3 455 1.76e-19 90.9
MS.gene69959.t1 AT2G36770 24.274 379 250 11 5 371 3 356 2.33e-19 90.9
MS.gene69959.t1 AT4G01070 22.200 491 264 14 12 423 5 456 2.87e-19 90.5
MS.gene69959.t1 AT4G34138 25.521 384 223 12 7 362 3 351 4.94e-19 89.7
MS.gene69959.t1 AT2G36780 25.344 363 239 10 15 365 14 356 6.81e-19 89.4
MS.gene69959.t1 AT5G14860 22.970 505 275 20 15 438 8 479 7.84e-19 89.0
MS.gene69959.t1 AT1G01390 25.203 369 230 12 14 365 7 346 2.64e-17 84.3
MS.gene69959.t1 AT1G01390 25.203 369 230 12 14 365 24 363 2.74e-17 84.3
MS.gene69959.t1 AT1G51210 26.158 367 222 12 6 363 8 334 3.46e-17 84.0
MS.gene69959.t1 AT4G14090 22.016 486 278 16 10 433 8 454 4.03e-17 83.6
MS.gene69959.t1 AT5G12890 23.857 503 275 21 17 439 12 486 4.26e-17 84.0
MS.gene69959.t1 AT2G23210 26.936 297 178 13 12 302 7 270 6.72e-17 81.3
MS.gene69959.t1 AT1G01420 25.867 375 220 14 14 365 10 349 9.47e-17 82.8
MS.gene69959.t1 AT1G01420 25.867 375 220 14 14 365 7 346 9.63e-17 82.8
MS.gene69959.t1 AT2G29710 25.967 362 225 13 17 365 7 338 1.21e-16 82.4
MS.gene69959.t1 AT4G01070 24.064 374 219 11 12 359 5 339 5.04e-16 79.3
MS.gene69959.t1 AT2G16890 22.041 490 281 22 15 434 9 467 6.69e-16 80.1
MS.gene69959.t1 AT5G03490 23.554 484 272 17 11 433 15 461 8.70e-16 79.7
MS.gene69959.t1 AT2G36790 27.249 378 231 13 15 377 13 361 9.99e-16 79.7
MS.gene69959.t1 AT2G29730 23.380 355 243 11 17 365 7 338 1.07e-14 76.3
MS.gene69959.t1 AT1G73880 25.762 361 228 12 13 362 12 343 1.25e-14 76.3
MS.gene69959.t1 AT3G21780 24.802 379 220 17 13 365 2 341 1.83e-14 75.5
MS.gene69959.t1 AT3G21790 24.866 374 227 16 17 365 6 350 1.18e-13 73.2
MS.gene69959.t1 AT3G16520 25.781 256 157 8 122 371 113 341 5.56e-13 70.9
MS.gene69959.t1 AT3G16520 25.781 256 157 8 122 371 113 341 5.78e-13 70.9
MS.gene69959.t1 AT3G21750 20.707 396 247 12 13 379 2 359 6.93e-13 70.9
MS.gene69959.t1 AT3G16520 25.781 256 157 8 122 371 113 341 7.30e-13 70.5
MS.gene69959.t1 AT2G16890 23.497 366 226 16 15 362 9 338 8.56e-13 70.1
MS.gene69959.t1 AT2G29740 22.581 372 247 13 11 365 4 351 1.66e-12 69.7
MS.gene69959.t1 AT1G07240 22.427 379 206 13 122 435 121 476 9.62e-12 67.0
MS.gene69959.t1 AT2G29750 22.835 381 235 14 11 365 4 351 5.48e-11 64.7
MS.gene69959.t1 AT4G27560 24.079 353 228 11 13 362 5 320 9.64e-11 63.9

Find 79 sgRNAs with CRISPR-Local

Find 145 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
GTGTAAAATGGTTGAGTAAA+TGG 0.197658 3.4:+75634835 MS.gene69959:CDS
AAATTAACCATGATGTTAAA+AGG 0.220501 3.4:+75635240 MS.gene69959:CDS
GTTGCATCTTTATCTGATTC+TGG 0.253266 3.4:-75633555 None:intergenic
TTATGCAAGTCTTGGAAAAT+AGG 0.254671 3.4:+75635212 MS.gene69959:CDS
GCTATATATGTTTGGGTTGT+TGG 0.297676 3.4:-75634718 None:intergenic
CATTAACACGTTCGAAGAAT+TGG 0.298616 3.4:+75634668 MS.gene69959:CDS
GGGCCAATGCTATATATGTT+TGG 0.325630 3.4:-75634726 None:intergenic
GCATTCAAGAGCTAGTGTTT+TGG 0.352577 3.4:+75633739 MS.gene69959:CDS
ACCGTTGCAACGTAGGAGTT+TGG 0.360613 3.4:-75633415 None:intergenic
GGCCAATGCTATATATGTTT+GGG 0.361324 3.4:-75634725 None:intergenic
GGAAGAGTAGCAAAAGATTT+AGG 0.366898 3.4:+75633717 MS.gene69959:CDS
CTAGTTTAACTTACCTTTGA+AGG 0.367130 3.4:-75633829 None:intergenic
TCAGTACTATATATTAATTA+TGG 0.370543 3.4:+75634867 MS.gene69959:CDS
ATGACCCAGAATGTGTAAAA+TGG 0.381120 3.4:+75634823 MS.gene69959:CDS
ATCATCTGAAAGAATTTGCT+TGG 0.389361 3.4:+75634913 MS.gene69959:CDS
TCAGCAACTATGCAAGTAAC+TGG 0.394555 3.4:-75633675 None:intergenic
TATGCAAGTCTTGGAAAATA+GGG 0.395953 3.4:+75635213 MS.gene69959:CDS
ACATGACCTTGTACTGGAAA+TGG 0.407592 3.4:-75633372 None:intergenic
AAACGTTTGGTAAAATCTCT+TGG 0.407880 3.4:+75633474 MS.gene69959:CDS
TCATCTGAAAGAATTTGCTT+GGG 0.418021 3.4:+75634914 MS.gene69959:CDS
CTAGAAAAGCTACTAATTTG+AGG 0.420613 3.4:+75635351 MS.gene69959:CDS
CTAGATGAAGTTAAGGATAG+AGG 0.430340 3.4:+75635026 MS.gene69959:CDS
TGAATTCAACCACAAACGTT+TGG 0.432420 3.4:+75633461 MS.gene69959:CDS
TGTTGGCCCTAAGGGTATCA+AGG 0.436616 3.4:-75634701 None:intergenic
TCTTCACCCATTGCTACATC+TGG 0.440690 3.4:-75634978 None:intergenic
TCTGATTCTGGTAAACCATC+AGG 0.441558 3.4:-75633543 None:intergenic
TGTAAAATGGTTGAGTAAAT+GGG 0.441595 3.4:+75634836 MS.gene69959:CDS
GTAGGTATTTATGCAAGTCT+TGG 0.444492 3.4:+75635204 MS.gene69959:intron
TGTTTGGGTTGTTGGCCCTA+AGG 0.446057 3.4:-75634710 None:intergenic
GTTTGGGTTGTTGGCCCTAA+GGG 0.446250 3.4:-75634709 None:intergenic
GTGAAACCCTTGATACCCTT+AGG 0.448960 3.4:+75634694 MS.gene69959:CDS
ACAAGTCTAGATTGGATCTC+AGG 0.451630 3.4:+75634525 MS.gene69959:CDS
AATTAACCATGATGTTAAAA+GGG 0.468721 3.4:+75635241 MS.gene69959:CDS
AGAAATTGTGATGGAAATGA+TGG 0.474306 3.4:+75635274 MS.gene69959:CDS
TAGAAAAGCTACTAATTTGA+GGG 0.476899 3.4:+75635352 MS.gene69959:CDS
AGAGTTTCTAGATGAAGTTA+AGG 0.478392 3.4:+75635019 MS.gene69959:CDS
CCTTGGATACAAGTCTAGAT+TGG 0.486139 3.4:+75634517 MS.gene69959:CDS
TTTGTACCATTTCCAGTACA+AGG 0.498943 3.4:+75633366 MS.gene69959:CDS
CTTTGAAAGAGCTTGTGAAA+AGG 0.502820 3.4:+75633628 MS.gene69959:CDS
TAGTTTAACTTACCTTTGAA+GGG 0.513091 3.4:-75633828 None:intergenic
GTTACTTGCATAGTTGCTGA+TGG 0.514102 3.4:+75633678 MS.gene69959:CDS
GTTGGCCCTAAGGGTATCAA+GGG 0.515534 3.4:-75634700 None:intergenic
AGAAATGAGACAAAAGTGCT+TGG 0.515737 3.4:+75635313 MS.gene69959:CDS
AGTTTGGCTAGTTGCATGAA+AGG 0.517620 3.4:-75633399 None:intergenic
TCTGTGATTCTCATGAAGCT+TGG 0.520553 3.4:-75634576 None:intergenic
AGGAGAATTATTCCCTTCAA+AGG 0.523380 3.4:+75633816 MS.gene69959:CDS
GGGTTCACATGACCTTGTAC+TGG 0.527592 3.4:-75633378 None:intergenic
CTTGGAGCTGACTTTGTCAA+GGG 0.531513 3.4:+75633492 MS.gene69959:CDS
TTCTGGTAAACCATCAGGTA+TGG 0.543800 3.4:-75633538 None:intergenic
ATAGAGGATACATAACTAGT+TGG 0.545228 3.4:+75635042 MS.gene69959:CDS
TCTTGGAGCTGACTTTGTCA+AGG 0.548573 3.4:+75633491 MS.gene69959:CDS
GTGAGACCAGATGTAGCAAT+GGG 0.552354 3.4:+75634972 MS.gene69959:CDS
GTTTGGCTAGTTGCATGAAA+GGG 0.555128 3.4:-75633398 None:intergenic
AACCCAAACATATATAGCAT+TGG 0.559847 3.4:+75634723 MS.gene69959:CDS
TGAAACCCTTGATACCCTTA+GGG 0.560282 3.4:+75634695 MS.gene69959:CDS
GGAAATGATGGAAGGAGACA+AGG 0.560854 3.4:+75635286 MS.gene69959:CDS
CTACTTGCTTCACACAACGT+TGG 0.565874 3.4:-75633588 None:intergenic
GCCAAACTCCTACGTTGCAA+CGG 0.566590 3.4:+75633414 MS.gene69959:CDS
CAGTTTGAGACCATACCTGA+TGG 0.567679 3.4:+75633528 MS.gene69959:CDS
TGATATAACAGAAATTGTGA+TGG 0.569075 3.4:+75635265 MS.gene69959:CDS
CTCTACCAAGCATTTGACTC+GGG 0.577514 3.4:-75634746 None:intergenic
CCAATCTAGACTTGTATCCA+AGG 0.579158 3.4:-75634517 None:intergenic
CAAGTCTTGGAAAATAGGGA+TGG 0.583190 3.4:+75635217 MS.gene69959:CDS
TTAATATATAGTACTGAGCA+AGG 0.597770 3.4:-75634861 None:intergenic
AGTGAGACCAGATGTAGCAA+TGG 0.599381 3.4:+75634971 MS.gene69959:CDS
GTTGAATTCAGTGTTTACAA+AGG 0.606886 3.4:-75633448 None:intergenic
TGTGAAAACCGTTGCAACGT+AGG 0.610448 3.4:-75633422 None:intergenic
TCTCTACCAAGCATTTGACT+CGG 0.610662 3.4:-75634747 None:intergenic
GAAATGATGGAAGGAGACAA+GGG 0.612695 3.4:+75635287 MS.gene69959:CDS
CATCTGAAAGAATTTGCTTG+GGG 0.613452 3.4:+75634915 MS.gene69959:CDS
ATTGGCCCGAGTCAAATGCT+TGG 0.616050 3.4:+75634741 MS.gene69959:CDS
AACACGTTCGAAGAATTGGA+AGG 0.626637 3.4:+75634672 MS.gene69959:CDS
ATGCAAGTAACTGGAATATG+TGG 0.627997 3.4:-75633666 None:intergenic
AATACGGCGAGCTTGTTGAG+AGG 0.628978 3.4:+75633796 MS.gene69959:CDS
ACTTCATCTAGAAACTCTTG+TGG 0.641007 3.4:-75635014 None:intergenic
AATGGTACAAATACAGCATG+CGG 0.651874 3.4:-75633354 None:intergenic
TGAGACAAAAGTGCTTGGAG+TGG 0.660296 3.4:+75635318 MS.gene69959:CDS
ATTGTGATGGAAATGATGGA+AGG 0.667644 3.4:+75635278 MS.gene69959:CDS
AGAAAAGCTACTAATTTGAG+GGG 0.678503 3.4:+75635353 MS.gene69959:CDS

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! AAACAAGATACAATAATATT+TGG - chr3.4:75634049-75634068 None:intergenic 15.0%
!! ATAATTTAATATATATGCAG+TGG + chr3.4:75634107-75634126 MS.gene69959:intron 15.0%
!! TCAGTACTATATATTAATTA+TGG + chr3.4:75634867-75634886 MS.gene69959:CDS 15.0%
!! TTTCAAAATATATCACATAA+AGG - chr3.4:75634326-75634345 None:intergenic 15.0%
!! TTTCACAATATAAATTTGAA+TGG - chr3.4:75634436-75634455 None:intergenic 15.0%
!!! AATCTGAAATTAAAATACAT+AGG + chr3.4:75634229-75634248 MS.gene69959:intron 15.0%
!!! ATAGTAAATTACCTTTTTTA+TGG + chr3.4:75634946-75634965 MS.gene69959:CDS 15.0%
!!! GATATATTTTGAAATTCTTT+CGG + chr3.4:75634332-75634351 MS.gene69959:intron 15.0%
!! AAATTAACCATGATGTTAAA+AGG + chr3.4:75635240-75635259 MS.gene69959:CDS 20.0%
!! AATTAACCATGATGTTAAAA+GGG + chr3.4:75635241-75635260 MS.gene69959:CDS 20.0%
!!! TGATGTTTTGTTTAATTTTG+TGG + chr3.4:75634605-75634624 MS.gene69959:CDS 20.0%
!!! TTTTTGGGATATTTACAATA+CGG + chr3.4:75633780-75633799 MS.gene69959:CDS 20.0%
! ATATATATGAGATGTGTCAA+AGG - chr3.4:75633948-75633967 None:intergenic 25.0%
! ATCTACGAATTTGATTAAAG+TGG - chr3.4:75634475-75634494 None:intergenic 25.0%
! GCTAAAAATGATGTAATCAT+TGG - chr3.4:75634005-75634024 None:intergenic 25.0%
! TAGAAAAGCTACTAATTTGA+GGG + chr3.4:75635352-75635371 MS.gene69959:CDS 25.0%
! TCTACGAATTTGATTAAAGT+GGG - chr3.4:75634474-75634493 None:intergenic 25.0%
! TGACACATCTCATATATATT+TGG + chr3.4:75633949-75633968 MS.gene69959:intron 25.0%
! TGATATAACAGAAATTGTGA+TGG + chr3.4:75635265-75635284 MS.gene69959:CDS 25.0%
! TGTAAAATGGTTGAGTAAAT+GGG + chr3.4:75634836-75634855 MS.gene69959:CDS 25.0%
!! GATGAAACTTTTATTGATGA+TGG + chr3.4:75634492-75634511 MS.gene69959:intron 25.0%
!! TAGTTTAACTTACCTTTGAA+GGG - chr3.4:75633831-75633850 None:intergenic 25.0%
!! TTAATATATAGTACTGAGCA+AGG - chr3.4:75634864-75634883 None:intergenic 25.0%
!! TTTTCAGAAGTTAATCAAAG+AGG + chr3.4:75635391-75635410 MS.gene69959:CDS 25.0%
!!! ATTTGATTAAAGTGGGTTAA+AGG - chr3.4:75634467-75634486 None:intergenic 25.0%
!!! TTTGATTAAAGTGGGTTAAA+GGG - chr3.4:75634466-75634485 None:intergenic 25.0%
AAACGTTTGGTAAAATCTCT+TGG + chr3.4:75633474-75633493 MS.gene69959:CDS 30.0%
AACCCAAACATATATAGCAT+TGG + chr3.4:75634723-75634742 MS.gene69959:CDS 30.0%
ACACTTGAAACAATTTCTTC+TGG + chr3.4:75635134-75635153 MS.gene69959:intron 30.0%
ACTGCTAATGTACAAAACAA+AGG - chr3.4:75634136-75634155 None:intergenic 30.0%
AGAAAAGCTACTAATTTGAG+GGG + chr3.4:75635353-75635372 MS.gene69959:CDS 30.0%
ATAGAGGATACATAACTAGT+TGG + chr3.4:75635042-75635061 MS.gene69959:CDS 30.0%
ATATGCAGAAAACAATCAGA+AGG - chr3.4:75633863-75633882 None:intergenic 30.0%
CTAGAAAAGCTACTAATTTG+AGG + chr3.4:75635351-75635370 MS.gene69959:CDS 30.0%
GTGTAAAATGGTTGAGTAAA+TGG + chr3.4:75634835-75634854 MS.gene69959:CDS 30.0%
GTTGAATTCAGTGTTTACAA+AGG - chr3.4:75633451-75633470 None:intergenic 30.0%
TATGCAAGTCTTGGAAAATA+GGG + chr3.4:75635213-75635232 MS.gene69959:CDS 30.0%
TTATGCAAGTCTTGGAAAAT+AGG + chr3.4:75635212-75635231 MS.gene69959:CDS 30.0%
! AGAAATTGTGATGGAAATGA+TGG + chr3.4:75635274-75635293 MS.gene69959:CDS 30.0%
! AGAGTTTCTAGATGAAGTTA+AGG + chr3.4:75635019-75635038 MS.gene69959:CDS 30.0%
! ATCATCTGAAAGAATTTGCT+TGG + chr3.4:75634913-75634932 MS.gene69959:CDS 30.0%
! CTAGTTTAACTTACCTTTGA+AGG - chr3.4:75633832-75633851 None:intergenic 30.0%
! CTTGTCTTTTGTATTGTATG+AGG - chr3.4:75634276-75634295 None:intergenic 30.0%
! GATTTTCCTGAGAAAGAAAA+TGG + chr3.4:75634768-75634787 MS.gene69959:CDS 30.0%
! GTAAAACCATTTTCTTTCTC+AGG - chr3.4:75634777-75634796 None:intergenic 30.0%
! TATCATCCCTTTTAACATCA+TGG - chr3.4:75635250-75635269 None:intergenic 30.0%
! TCAACCATTTTACACATTCT+GGG - chr3.4:75634830-75634849 None:intergenic 30.0%
! TCATCTGAAAGAATTTGCTT+GGG + chr3.4:75634914-75634933 MS.gene69959:CDS 30.0%
! TCTCAAACAATTTTGTGTCT+CGG - chr3.4:75634634-75634653 None:intergenic 30.0%
!!! ATAGTTGCTGATGGTTTTTT+GGG + chr3.4:75633687-75633706 MS.gene69959:CDS 30.0%
AAGAAAGGCCAACAAATAGT+AGG - chr3.4:75635164-75635183 None:intergenic 35.0%
AATGGTACAAATACAGCATG+CGG - chr3.4:75633357-75633376 None:intergenic 35.0%
ACTTCATCTAGAAACTCTTG+TGG - chr3.4:75635017-75635036 None:intergenic 35.0%
AGGAGAATTATTCCCTTCAA+AGG + chr3.4:75633816-75633835 MS.gene69959:CDS 35.0%
ATGACCCAGAATGTGTAAAA+TGG + chr3.4:75634823-75634842 MS.gene69959:CDS 35.0%
ATGCAAGTAACTGGAATATG+TGG - chr3.4:75633669-75633688 None:intergenic 35.0%
CATTAACACGTTCGAAGAAT+TGG + chr3.4:75634668-75634687 MS.gene69959:CDS 35.0%
CTAGATGAAGTTAAGGATAG+AGG + chr3.4:75635026-75635045 MS.gene69959:CDS 35.0%
CTGAGCAACAAACAAATTGT+AGG + chr3.4:75635186-75635205 MS.gene69959:intron 35.0%
GGAAGAGTAGCAAAAGATTT+AGG + chr3.4:75633717-75633736 MS.gene69959:CDS 35.0%
GGCCAATGCTATATATGTTT+GGG - chr3.4:75634728-75634747 None:intergenic 35.0%
GGTCTCACTATCCATAAAAA+AGG - chr3.4:75634960-75634979 None:intergenic 35.0%
GTAGGTATTTATGCAAGTCT+TGG + chr3.4:75635204-75635223 MS.gene69959:intron 35.0%
GTTGCATCTTTATCTGATTC+TGG - chr3.4:75633558-75633577 None:intergenic 35.0%
TCTGCATATATATGAAGCAC+TGG + chr3.4:75633874-75633893 MS.gene69959:intron 35.0%
TGAATTCAACCACAAACGTT+TGG + chr3.4:75633461-75633480 MS.gene69959:CDS 35.0%
TTTGTACCATTTCCAGTACA+AGG + chr3.4:75633366-75633385 MS.gene69959:CDS 35.0%
! ATTGTGATGGAAATGATGGA+AGG + chr3.4:75635278-75635297 MS.gene69959:CDS 35.0%
! CATCTGAAAGAATTTGCTTG+GGG + chr3.4:75634915-75634934 MS.gene69959:CDS 35.0%
! CTCAACCATTTTACACATTC+TGG - chr3.4:75634831-75634850 None:intergenic 35.0%
! CTTTGAAAGAGCTTGTGAAA+AGG + chr3.4:75633628-75633647 MS.gene69959:CDS 35.0%
! CTTTTCACAAGCTCTTTCAA+AGG - chr3.4:75633630-75633649 None:intergenic 35.0%
! GAGATTTTACCAAACGTTTG+TGG - chr3.4:75633473-75633492 None:intergenic 35.0%
!! AAGGAGTGTCATACAAGTTT+CGG - chr3.4:75633929-75633948 None:intergenic 35.0%
!! AGAAATGAGACAAAAGTGCT+TGG + chr3.4:75635313-75635332 MS.gene69959:CDS 35.0%
!! GAAAATGGTTTTACAGCAAG+TGG + chr3.4:75634783-75634802 MS.gene69959:CDS 35.0%
!! GCTATATATGTTTGGGTTGT+TGG - chr3.4:75634721-75634740 None:intergenic 35.0%
!!! CATAGTTGCTGATGGTTTTT+TGG + chr3.4:75633686-75633705 MS.gene69959:CDS 35.0%
!!! TTTTATTGATGATGGCACCT+TGG + chr3.4:75634500-75634519 MS.gene69959:CDS 35.0%
AACACGTTCGAAGAATTGGA+AGG + chr3.4:75634672-75634691 MS.gene69959:CDS 40.0%
ACAAGTCTAGATTGGATCTC+AGG + chr3.4:75634525-75634544 MS.gene69959:CDS 40.0%
ACATGACCTTGTACTGGAAA+TGG - chr3.4:75633375-75633394 None:intergenic 40.0%
CAAGTCTTGGAAAATAGGGA+TGG + chr3.4:75635217-75635236 MS.gene69959:CDS 40.0%
CCAATCTAGACTTGTATCCA+AGG - chr3.4:75634520-75634539 None:intergenic 40.0%
CCTTGGATACAAGTCTAGAT+TGG + chr3.4:75634517-75634536 MS.gene69959:CDS 40.0%
CTGGTATGCCTACTATTTGT+TGG + chr3.4:75635153-75635172 MS.gene69959:intron 40.0%
GATTCTTGACTCATTGTGGT+TGG + chr3.4:75635105-75635124 MS.gene69959:intron 40.0%
GGGCCAATGCTATATATGTT+TGG - chr3.4:75634729-75634748 None:intergenic 40.0%
GTTACTTGCATAGTTGCTGA+TGG + chr3.4:75633678-75633697 MS.gene69959:CDS 40.0%
TCAGCAACTATGCAAGTAAC+TGG - chr3.4:75633678-75633697 None:intergenic 40.0%
TCTCTACCAAGCATTTGACT+CGG - chr3.4:75634750-75634769 None:intergenic 40.0%
TCTGATTCTGGTAAACCATC+AGG - chr3.4:75633546-75633565 None:intergenic 40.0%
TCTGTGATTCTCATGAAGCT+TGG - chr3.4:75634579-75634598 None:intergenic 40.0%
TGAAACCCTTGATACCCTTA+GGG + chr3.4:75634695-75634714 MS.gene69959:CDS 40.0%
TGCTTTCTCATCCATCAGTT+GGG + chr3.4:75635081-75635100 MS.gene69959:intron 40.0%
TTCTGGTAAACCATCAGGTA+TGG - chr3.4:75633541-75633560 None:intergenic 40.0%
! AGTTTGGCTAGTTGCATGAA+AGG - chr3.4:75633402-75633421 None:intergenic 40.0%
! GAAATGATGGAAGGAGACAA+GGG + chr3.4:75635287-75635306 MS.gene69959:CDS 40.0%
! GCATTCAAGAGCTAGTGTTT+TGG + chr3.4:75633739-75633758 MS.gene69959:CDS 40.0%
! GTTTGGCTAGTTGCATGAAA+GGG - chr3.4:75633401-75633420 None:intergenic 40.0%
! GTTTGTTGCTCAGCAAAGAA+AGG - chr3.4:75635179-75635198 None:intergenic 40.0%
!! CAGCAAGTGGTTCAAGTTTT+TGG + chr3.4:75634796-75634815 MS.gene69959:CDS 40.0%
AGTGAGACCAGATGTAGCAA+TGG + chr3.4:75634971-75634990 MS.gene69959:CDS 45.0%
CTACTTGCTTCACACAACGT+TGG - chr3.4:75633591-75633610 None:intergenic 45.0%
CTCTACCAAGCATTTGACTC+GGG - chr3.4:75634749-75634768 None:intergenic 45.0%
CTTTCTCATCCATCAGTTGG+GGG + chr3.4:75635083-75635102 MS.gene69959:intron 45.0%
GCTTTCTCATCCATCAGTTG+GGG + chr3.4:75635082-75635101 MS.gene69959:intron 45.0%
GTCATGTTAGGTGTCTCTGT+CGG + chr3.4:75634176-75634195 MS.gene69959:intron 45.0%
GTGAAACCCTTGATACCCTT+AGG + chr3.4:75634694-75634713 MS.gene69959:CDS 45.0%
GTGAGACCAGATGTAGCAAT+GGG + chr3.4:75634972-75634991 MS.gene69959:CDS 45.0%
GTGCTTTCTCATCCATCAGT+TGG + chr3.4:75635080-75635099 MS.gene69959:intron 45.0%
GTTCGTGTCAGTGTCATGTT+AGG + chr3.4:75634164-75634183 MS.gene69959:intron 45.0%
TCTTCACCCATTGCTACATC+TGG - chr3.4:75634981-75635000 None:intergenic 45.0%
TGTGAAAACCGTTGCAACGT+AGG - chr3.4:75633425-75633444 None:intergenic 45.0%
TTTCGGAATCCCACATTGCT+CGG + chr3.4:75634349-75634368 MS.gene69959:intron 45.0%
! ATACAGCATGCGGCTTTTGT+TGG - chr3.4:75633347-75633366 None:intergenic 45.0%
! CAGTTTGAGACCATACCTGA+TGG + chr3.4:75633528-75633547 MS.gene69959:CDS 45.0%
! CTTGGAGCTGACTTTGTCAA+GGG + chr3.4:75633492-75633511 MS.gene69959:CDS 45.0%
! GCTTCTGCTTGTGGCTTTTT+GGG + chr3.4:75633765-75633784 MS.gene69959:CDS 45.0%
! GGAAATGATGGAAGGAGACA+AGG + chr3.4:75635286-75635305 MS.gene69959:CDS 45.0%
! TACAGCATGCGGCTTTTGTT+GGG - chr3.4:75633346-75633365 None:intergenic 45.0%
! TCTTGGAGCTGACTTTGTCA+AGG + chr3.4:75633491-75633510 MS.gene69959:CDS 45.0%
! TGCTTCTGCTTGTGGCTTTT+TGG + chr3.4:75633764-75633783 MS.gene69959:CDS 45.0%
! TTTTGGACTGCTTCTGCTTG+TGG + chr3.4:75633756-75633775 MS.gene69959:CDS 45.0%
! TTTTGTTGGGTATGCGGAGA+GGG - chr3.4:75633333-75633352 None:intergenic 45.0%
!! TGAGACAAAAGTGCTTGGAG+TGG + chr3.4:75635318-75635337 MS.gene69959:CDS 45.0%
!!! GATGGTTTTTTGGGCTTTGC+TGG + chr3.4:75633696-75633715 MS.gene69959:CDS 45.0%
ACCGTTGCAACGTAGGAGTT+TGG - chr3.4:75633418-75633437 None:intergenic 50.0%
ATTGGCCCGAGTCAAATGCT+TGG + chr3.4:75634741-75634760 MS.gene69959:CDS 50.0%
GCCAAACTCCTACGTTGCAA+CGG + chr3.4:75633414-75633433 MS.gene69959:CDS 50.0%
GGGGGATTCTTGACTCATTG+TGG + chr3.4:75635101-75635120 MS.gene69959:intron 50.0%
GGGTTCACATGACCTTGTAC+TGG - chr3.4:75633381-75633400 None:intergenic 50.0%
GTCAAGAATCCCCCAACTGA+TGG - chr3.4:75635095-75635114 None:intergenic 50.0%
TTCGGAATCCCACATTGCTC+GGG + chr3.4:75634350-75634369 MS.gene69959:intron 50.0%
! CTTTTGTTGGGTATGCGGAG+AGG - chr3.4:75633334-75633353 None:intergenic 50.0%
! TGCGGCTTTTGTTGGGTATG+CGG - chr3.4:75633339-75633358 None:intergenic 50.0%
!! AATACGGCGAGCTTGTTGAG+AGG + chr3.4:75633796-75633815 MS.gene69959:CDS 50.0%
!! GTTGGCCCTAAGGGTATCAA+GGG - chr3.4:75634703-75634722 None:intergenic 50.0%
!! GTTTGGGTTGTTGGCCCTAA+GGG - chr3.4:75634712-75634731 None:intergenic 50.0%
!! TGTTGGCCCTAAGGGTATCA+AGG - chr3.4:75634704-75634723 None:intergenic 50.0%
!! TGTTTGGGTTGTTGGCCCTA+AGG - chr3.4:75634713-75634732 None:intergenic 50.0%
AGCCTAGAACCCGAGCAATG+TGG - chr3.4:75634362-75634381 None:intergenic 55.0%
GCCTAGAACCCGAGCAATGT+GGG - chr3.4:75634361-75634380 None:intergenic 55.0%
TCCCACATTGCTCGGGTTCT+AGG + chr3.4:75634357-75634376 MS.gene69959:intron 55.0%
!! TGCTCGGGTTCTAGGCTTGT+TGG + chr3.4:75634365-75634384 MS.gene69959:intron 55.0%


Chromosome Type Strat End Strand Name
chr3.4 gene 75633315 75635436 75633315 ID=MS.gene69959
chr3.4 mRNA 75633315 75635436 75633315 ID=MS.gene69959.t1;Parent=MS.gene69959
chr3.4 exon 75633315 75633837 75633315 ID=MS.gene69959.t1.exon1;Parent=MS.gene69959.t1
chr3.4 CDS 75633315 75633837 75633315 ID=cds.MS.gene69959.t1;Parent=MS.gene69959.t1
chr3.4 exon 75634493 75635063 75634493 ID=MS.gene69959.t1.exon2;Parent=MS.gene69959.t1
chr3.4 CDS 75634493 75635063 75634493 ID=cds.MS.gene69959.t1;Parent=MS.gene69959.t1
chr3.4 exon 75635208 75635436 75635208 ID=MS.gene69959.t1.exon3;Parent=MS.gene69959.t1
chr3.4 CDS 75635208 75635436 75635208 ID=cds.MS.gene69959.t1;Parent=MS.gene69959.t1
Gene Sequence

>MS.gene69959

ATGGACTCTTATTCTCCCTCTCCGCATACCCAACAAAAGCCGCATGCTGTATTTGTACCATTTCCAGTACAAGGTCATGTGAACCCTTTCATGCAACTAGCCAAACTCCTACGTTGCAACGGTTTTCACATAACCTTTGTAAACACTGAATTCAACCACAAACGTTTGGTAAAATCTCTTGGAGCTGACTTTGTCAAGGGTCTAACAGATTTTCAGTTTGAGACCATACCTGATGGTTTACCAGAATCAGATAAAGATGCAACACAAGATATTCCAACGTTGTGTGAAGCAAGTAGAAAAAACTTTTACGCTCCTTTGAAAGAGCTTGTGAAAAGGCTCAACACTTCTTCACCACATATTCCAGTTACTTGCATAGTTGCTGATGGTTTTTTGGGCTTTGCTGGAAGAGTAGCAAAAGATTTAGGCATTCAAGAGCTAGTGTTTTGGACTGCTTCTGCTTGTGGCTTTTTGGGATATTTACAATACGGCGAGCTTGTTGAGAGGAGAATTATTCCCTTCAAAGGTAAGTTAAACTAGTAGTATCTCCTTCTGATTGTTTTCTGCATATATATGAAGCACTGGCACATCTATGACTAGACTTGTTGCGTTGTCCGAAACTTGTATGACACTCCTTTGACACATCTCATATATATTTGGAAGAGTCAAAGTTGTGTTTAGAAGTATAATCCAATGATTACATCATTTTTAGCTTTTAGATGTATAAATAAATGCCAAATATTATTGTATCTTGTTTTAAAACTTTTTTAAATGCACATGTATATATTTTGATAAATAATTTAATATATATGCAGTGGTGTCCTTTGTTTTGTACATTAGCAGTGTCGACTTGTTCGTGTCAGTGTCATGTTAGGTGTCTCTGTCGGAGTCTATGCTTCATACATAGTTATGCAACAAATCTGAAATTAAAATACATAGGAGAAGAGTTCAAAATTTCACTCCTCATACAATACAAAAGACAAGTTATAATGAAGTTCATTATTACATTTTCCTTTATGTGATATATTTTGAAATTCTTTCGGAATCCCACATTGCTCGGGTTCTAGGCTTGTTGGATGTATAAATGTTTTAAAGATTGACTAATTCAAACAAGATGTCATCCATTCAAATTTATATTGTGAAACTTTATTCCCTTTAACCCACTTTAATCAAATTCGTAGATGAAACTTTTATTGATGATGGCACCTTGGATACAAGTCTAGATTGGATCTCAGGAATGAAAGATATCAGACTAAAAGATCTTCCAAGCTTCATGAGAATCACAGATCTAAGTGATGTTTTGTTTAATTTTGTGGTCTCCGAGACACAAAATTGTTTGAGATCATCGACAATAATCATTAACACGTTCGAAGAATTGGAAGGTGAAACCCTTGATACCCTTAGGGCCAACAACCCAAACATATATAGCATTGGCCCGAGTCAAATGCTTGGTAGAGATTTTCCTGAGAAAGAAAATGGTTTTACAGCAAGTGGTTCAAGTTTTTGGAAAAATGACCCAGAATGTGTAAAATGGTTGAGTAAATGGGAACCTTGCTCAGTACTATATATTAATTATGGAAGTATAACTGTTATGACAAATCATCATCTGAAAGAATTTGCTTGGGGAATAGCAAATAGTAAATTACCTTTTTTATGGATAGTGAGACCAGATGTAGCAATGGGTGAAGAGACTTCAACTTTGCCACAAGAGTTTCTAGATGAAGTTAAGGATAGAGGATACATAACTAGTTGGTGCTTTCAAGATCAAGTGCTTTCTCATCCATCAGTTGGGGGATTCTTGACTCATTGTGGTTGGAATTCTACACTTGAAACAATTTCTTCTGGTATGCCTACTATTTGTTGGCCTTTCTTTGCTGAGCAACAAACAAATTGTAGGTATTTATGCAAGTCTTGGAAAATAGGGATGGAAATTAACCATGATGTTAAAAGGGATGATATAACAGAAATTGTGATGGAAATGATGGAAGGAGACAAGGGAAAAGAAATGAGACAAAAGTGCTTGGAGTGGAAGAATAAAGCTAGAAAAGCTACTAATTTGAGGGGATCATCATACAATAATTTTCAGAAGTTAATCAAAGAGGTTCTTCATCATAAAGCTATTTGA
Protein sequence

>MS.gene69959.t1

MDSYSPSPHTQQKPHAVFVPFPVQGHVNPFMQLAKLLRCNGFHITFVNTEFNHKRLVKSLGADFVKGLTDFQFETIPDGLPESDKDATQDIPTLCEASRKNFYAPLKELVKRLNTSSPHIPVTCIVADGFLGFAGRVAKDLGIQELVFWTASACGFLGYLQYGELVERRIIPFKDETFIDDGTLDTSLDWISGMKDIRLKDLPSFMRITDLSDVLFNFVVSETQNCLRSSTIIINTFEELEGETLDTLRANNPNIYSIGPSQMLGRDFPEKENGFTASGSSFWKNDPECVKWLSKWEPCSVLYINYGSITVMTNHHLKEFAWGIANSKLPFLWIVRPDVAMGEETSTLPQEFLDEVKDRGYITSWYLCKSWKIGMEINHDVKRDDITEIVMEMMEGDKGKEMRQKCLEWKNKARKATNLRGSSYNNFQKLIKEVLHHKAI