AlfalfaGEDB | MS.gene70104

M. sativa cultivar XinJiangDaYe / MS.gene70104

KEGG: K12489
GO: GO:0003674 GO:0005096 GO:0005488 GO:0005515 GO:0005575 GO:0005737 GO:0008047 GO:0030234 GO:0030695 GO:0060589 GO:0098772 GO:0110165
PFAM: PF00169.32 PF01412.21 PF13637.9 PF16746.8

Nr:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70104.t1	AET05065.2	99	794	8	0	1	794	1	794	0.00E+00	1460.7

Swissprot:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70104.t1	Q5W7F2	59.4	756	274	8	1	727	1	752	7.7e-242	838.2

Trembl:

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70104.t1	G7LIT7	99.0	794	8	0	1	794	1	794	0.0e+00	1460.7

TFs/TRs:

Gene ID	Type	Classification

Protein Kinases:

Gene ID	Type	Classification

Network:

Co-expression Network:

Gene1	Gene2	correlation coefficient	p_value	FDR
MS.gene052469	MS.gene70104	0.815283	1.00E-51	-1.69E-46

PPI:

Gene1	Gene2	Type

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70104.t1	MTR_8g100100	98.615	794	11	0	1	794	1	794	0.0	1629
MS.gene70104.t1	MTR_8g100100	97.875	800	11	1	1	794	1	800	0.0	1622
MS.gene70104.t1	MTR_3g098680	66.584	802	257	6	1	793	1	800	0.0	1061
MS.gene70104.t1	MTR_7g020860	58.629	817	300	6	1	780	1	816	0.0	936
MS.gene70104.t1	MTR_7g020860	64.613	633	216	3	1	625	1	633	0.0	818
MS.gene70104.t1	MTR_4g074170	45.012	802	391	9	3	791	5	769	0.0	670
MS.gene70104.t1	MTR_2g080950	40.559	143	54	3	492	634	14	125	3.73e-24	107
MS.gene70104.t1	MTR_8g464390	38.356	146	59	3	492	637	14	128	5.49e-22	100
MS.gene70104.t1	MTR_6g080710	37.975	158	66	3	479	636	4	129	4.05e-21	94.7
MS.gene70104.t1	MTR_8g038400	40.000	135	56	3	505	638	28	138	6.54e-21	95.9
MS.gene70104.t1	MTR_3g017500	39.583	144	61	4	497	639	24	142	2.97e-19	90.9
MS.gene70104.t1	MTR_3g017500	39.583	144	61	4	497	639	54	172	4.61e-19	90.9
MS.gene70104.t1	MTR_2g030230	39.844	128	52	3	506	632	30	133	2.44e-18	87.4
MS.gene70104.t1	MTR_8g088320	37.500	128	55	3	506	632	21	124	3.18e-18	87.0
MS.gene70104.t1	MTR_1g069000	46.667	75	38	1	500	574	10	82	3.58e-14	76.3
MS.gene70104.t1	MTR_8g067080	47.945	73	36	1	500	572	16	86	3.37e-13	72.8
MS.gene70104.t1	MTR_8g067080	47.945	73	36	1	500	572	16	86	3.38e-13	72.8
MS.gene70104.t1	MTR_8g471110	47.945	73	36	1	500	572	16	86	3.38e-13	72.8
MS.gene70104.t1	MTR_7g099830	46.377	69	35	1	506	574	16	82	4.88e-13	72.4
MS.gene70104.t1	MTR_8g067090	46.753	77	36	2	499	572	12	86	1.72e-12	70.5
MS.gene70104.t1	MTR_8g471120	46.753	77	36	2	499	572	12	86	1.72e-12	70.5

Query id	Subject id	identity %	alignment length	mismatches	gap openings	q. start	q. end	s. start	s. end	e-value	bit score
MS.gene70104.t1	AT5G13300	58.659	820	306	8	1	791	1	816	0.0	947
MS.gene70104.t1	AT5G61980	56.953	827	316	7	1	791	1	823	0.0	929
MS.gene70104.t1	AT1G10870	42.699	815	398	15	3	791	4	775	0.0	616
MS.gene70104.t1	AT1G10870	42.822	815	392	16	3	791	4	770	0.0	613
MS.gene70104.t1	AT1G60860	41.769	814	403	15	3	791	4	771	0.0	603
MS.gene70104.t1	AT1G60860	40.793	706	347	15	111	791	1	660	7.17e-165	493
MS.gene70104.t1	AT1G60860	39.441	644	319	15	173	791	3	600	7.96e-137	418
MS.gene70104.t1	AT5G54310	41.096	146	55	3	492	637	14	128	5.03e-24	107
MS.gene70104.t1	AT3G17660	38.710	155	59	5	479	632	4	123	2.20e-21	92.8
MS.gene70104.t1	AT3G17660	38.710	155	59	5	479	632	4	123	3.77e-21	93.6
MS.gene70104.t1	AT3G17660	38.710	155	59	5	479	632	4	123	6.39e-21	93.2
MS.gene70104.t1	AT4G21160	42.969	128	48	4	506	632	27	130	1.01e-20	94.7
MS.gene70104.t1	AT4G21160	42.969	128	48	4	506	632	27	130	1.01e-20	94.7
MS.gene70104.t1	AT4G21160	42.969	128	48	4	506	632	27	130	1.01e-20	94.7
MS.gene70104.t1	AT4G21160	42.969	128	48	4	506	632	27	130	1.01e-20	94.7
MS.gene70104.t1	AT3G07940	38.095	147	68	3	486	632	39	162	1.74e-20	92.8
MS.gene70104.t1	AT3G07940	38.095	147	68	3	486	632	39	162	7.50e-20	93.2
MS.gene70104.t1	AT4G05330	40.625	128	51	3	506	632	27	130	6.32e-19	89.4
MS.gene70104.t1	AT4G05330	40.625	128	51	3	506	632	27	130	6.32e-19	89.4
MS.gene70104.t1	AT3G17660	35.484	155	54	6	479	632	4	113	7.67e-16	77.8
MS.gene70104.t1	AT3G53710	48.529	68	33	1	506	573	16	81	2.24e-13	73.6
MS.gene70104.t1	AT3G53710	48.529	68	33	1	506	573	16	81	2.24e-13	73.6
MS.gene70104.t1	AT3G53710	48.529	68	33	1	506	573	16	81	2.24e-13	73.6
MS.gene70104.t1	AT2G35210	43.529	85	43	2	497	578	10	92	3.24e-13	72.4
MS.gene70104.t1	AT2G37550	47.059	68	34	1	506	573	16	81	4.10e-13	72.8
MS.gene70104.t1	AT2G37550	47.059	68	34	1	506	573	16	81	4.10e-13	72.8
MS.gene70104.t1	AT2G35210	46.835	79	37	2	497	572	10	86	5.58e-13	72.0
MS.gene70104.t1	AT2G03430	37.383	107	61	1	681	781	54	160	1.94e-12	68.2
MS.gene70104.t1	AT4G17890	43.373	83	42	2	499	578	15	95	2.49e-12	70.1
MS.gene70104.t1	AT4G17890	43.373	83	42	2	499	578	15	95	3.04e-12	69.7
MS.gene70104.t1	AT5G46750	43.373	83	42	2	499	578	12	92	4.90e-12	69.3
MS.gene70104.t1	AT4G05330	38.053	113	45	3	521	632	7	95	2.32e-11	66.2

Find 157 sgRNAs with CRISPR-Local

Find 0 sgRNAs with CRISPR-GE

CRISPR-Local

CRISPR-Local
sgRNA_sequence	on_target_score	Position	Region
TGACAATGGTTCTGGGCTTC+TGG	0.096871	4.1:-7018163	MS.gene70104:CDS
TGATGATTCTATTTCATTAA+AGG	0.144479	4.1:-7016621	MS.gene70104:CDS
CAACATTGACAATTTGTAAT+AGG	0.265049	4.1:+7021701	None:intergenic
ATGGTAAATTTGTTCATTAC+AGG	0.275454	4.1:+7021869	None:intergenic
ATAAGTTCCCTTGATAGTTT+TGG	0.276834	4.1:-7022012	MS.gene70104:CDS
AGAGGTTGTCACTGGAATTA+TGG	0.283751	4.1:-7019677	MS.gene70104:CDS
TGTAGAACTTGCAGCTTCTA+AGG	0.286053	4.1:+7022184	None:intergenic
TTTCCAGTCAGCTCTTAAAT+TGG	0.292472	4.1:+7018377	None:intergenic
GAAATAGAATCATCATGTTT+TGG	0.296893	4.1:+7016629	None:intergenic
GTATGCTGCCTTCTTGTCAT+TGG	0.305328	4.1:+7015827	None:intergenic
CTGAGAAAATATTTATTTGC+CGG	0.321910	4.1:-7015893	MS.gene70104:CDS
AGTCCCACTGACAATGGTTC+TGG	0.324367	4.1:-7018171	MS.gene70104:CDS
TGCAATGTATAGTTCTTTGA+TGG	0.329324	4.1:+7018000	None:intergenic
CTTAAGTATGTTTGAGTCCC+TGG	0.340791	4.1:-7016841	MS.gene70104:CDS
AAAGATGCCCAGTCTGGTTC+AGG	0.343556	4.1:+7017511	None:intergenic
GATGCAGCTTCTATGCTTAG+AGG	0.344497	4.1:-7022226	MS.gene70104:intron
CCATGCCGGCGTCACTTGTT+AGG	0.354129	4.1:+7015546	None:intergenic
CAATGAAATTCTCACTCTCT+TGG	0.354517	4.1:-7014339	MS.gene70104:CDS
CTATCAGCTAAGTCAGAAAA+TGG	0.358274	4.1:-7017736	MS.gene70104:CDS
CCTGCTAACATCAACTATAA+AGG	0.365055	4.1:-7018070	MS.gene70104:CDS
CAGAGCATTCAATGCATATA+AGG	0.366213	4.1:+7017476	None:intergenic
GACAATGGTTCTGGGCTTCT+GGG	0.370780	4.1:-7018162	MS.gene70104:CDS
GATTGGATGGAAAAGATAAA+TGG	0.371968	4.1:-7017875	MS.gene70104:CDS
TCTCCACTAGGAGAGCCATT+AGG	0.373489	4.1:+7018639	None:intergenic
CTAGAATACCTTTCCATTTG+CGG	0.374377	4.1:+7018557	None:intergenic
TTCATTTGATATCCTAGAAA+AGG	0.375722	4.1:+7018605	None:intergenic
GGCTTTCTTCTCATTACCAT+GGG	0.376756	4.1:-7018134	MS.gene70104:CDS
CTGTCCTTGAATGGCCCTAA+TGG	0.377424	4.1:-7018654	MS.gene70104:CDS
CACTCCTATGTTCCGCCAAC+AGG	0.380868	4.1:-7022330	MS.gene70104:intron
TTGACTGACGACATACAAAA+TGG	0.385111	4.1:-7015593	MS.gene70104:CDS
ATCAAAGAACTATACATTGC+AGG	0.392822	4.1:-7017998	MS.gene70104:intron
CTCCACTAGGAGAGCCATTA+GGG	0.394776	4.1:+7018640	None:intergenic
TGACACTTGATGTGAAAGTC+TGG	0.409680	4.1:-7016875	MS.gene70104:CDS
ACCTATTGATGTTCTTAGAA+AGG	0.423268	4.1:-7017569	MS.gene70104:CDS
GTAAAATACCAGACTGAAAC+GGG	0.424397	4.1:+7019821	None:intergenic
TTTGTCAGCTACATGTGGAT+TGG	0.430055	4.1:+7014409	None:intergenic
GATGCACGTAAGTGGTTCCT+AGG	0.432453	4.1:+7017634	None:intergenic
ACCTTTCTAAGAACATCAAT+AGG	0.433668	4.1:+7017568	None:intergenic
CCTTTATAGTTGATGTTAGC+AGG	0.437065	4.1:+7018070	None:intergenic
TACCAGCACATTGTCAAATC+AGG	0.440833	4.1:-7015807	MS.gene70104:CDS
TCATTTGATATCCTAGAAAA+GGG	0.464960	4.1:+7018606	None:intergenic
TTCATCTAGAGAACTCTTGT+CGG	0.466270	4.1:+7017699	None:intergenic
GAATGCAAGAACGTCGTTTG+AGG	0.467248	4.1:-7019847	MS.gene70104:CDS
GTGGTAAACCTGAACCAGAC+TGG	0.468140	4.1:-7017519	MS.gene70104:CDS
GTAAAGGAATCTGCCGCAAA+TGG	0.471355	4.1:-7018570	MS.gene70104:CDS
CAACAAAATGAGGATCAGTA+TGG	0.472218	4.1:+7021983	None:intergenic
AGGTTTAAAGATGCCCAGTC+TGG	0.473035	4.1:+7017505	None:intergenic
GTCCCACTGACAATGGTTCT+GGG	0.473303	4.1:-7018170	MS.gene70104:CDS
GATGTTCTTAGAAAGGTGAA+TGG	0.473710	4.1:-7017562	MS.gene70104:CDS
GGCCTCCTCCAAAACTATCA+AGG	0.473818	4.1:+7022004	None:intergenic
TCAGTGGGACTATTCTTCCT+TGG	0.474947	4.1:+7018183	None:intergenic
AGTAAAATACCAGACTGAAA+CGG	0.474964	4.1:+7019820	None:intergenic
TGAGGAAGCCCGTTTCAGTC+TGG	0.475000	4.1:-7019829	MS.gene70104:intron
CGTCACTTGTTAGGCAAGCC+AGG	0.475477	4.1:+7015555	None:intergenic
AACAAGTTTATCAAGATAGT+AGG	0.476249	4.1:-7018677	MS.gene70104:CDS
AAGATCACACTGAGGTCAAA+AGG	0.476723	4.1:-7017678	MS.gene70104:CDS
CTTATATGCATTGAATGCTC+TGG	0.490702	4.1:-7017475	MS.gene70104:CDS
GATAGTAGGCTGTCCTTGAA+TGG	0.492255	4.1:-7018663	MS.gene70104:CDS
GTTCTGGGCTTCTGGGTCGA+TGG	0.498425	4.1:-7018155	MS.gene70104:CDS
CTATTCTTCCTTGGAGATGA+CGG	0.501247	4.1:+7018192	None:intergenic
TGGCTTTCTTCTCATTACCA+TGG	0.501287	4.1:-7018135	MS.gene70104:CDS
AATTTCATTGCCAACACAGC+CGG	0.504022	4.1:+7014352	None:intergenic
CCTTCTTTGTCAGCTACATG+TGG	0.507074	4.1:+7014404	None:intergenic
ATGTTCTTAGAAAGGTGAAT+GGG	0.507757	4.1:-7017561	MS.gene70104:CDS
TACATACAGATCCTAGTGTC+TGG	0.508384	4.1:+7017828	None:intergenic
CTTCCAATTTAAGAGCTGAC+TGG	0.508677	4.1:-7018380	MS.gene70104:CDS
TGAAGTAGTAGATGTTGTAA+AGG	0.509076	4.1:-7018586	MS.gene70104:CDS
TTAAGTATGTTTGAGTCCCT+GGG	0.520194	4.1:-7016840	MS.gene70104:CDS
TGGTTCTAGTGCGATTCACC+TGG	0.521452	4.1:-7015573	MS.gene70104:CDS
TCTGGTGTTCATCGTAATCT+TGG	0.523970	4.1:-7017457	MS.gene70104:CDS
ATGCAGTGGACCAGATGGAT+TGG	0.526490	4.1:-7017892	MS.gene70104:CDS
AGAGCCATTAGGGCCATTCA+AGG	0.526775	4.1:+7018650	None:intergenic
ATGCACGTAAGTGGTTCCTA+GGG	0.527543	4.1:+7017635	None:intergenic
CCTCCCAAAGCAACAAAATG+AGG	0.528546	4.1:+7021973	None:intergenic
AGAACCTGTTGGCGGAACAT+AGG	0.533527	4.1:+7022326	None:intergenic
AAGACGTTGACACCCCTGTT+GGG	0.534141	4.1:-7016761	MS.gene70104:intron
GCCTCCTCCAAAACTATCAA+GGG	0.535836	4.1:+7022005	None:intergenic
TTGTTGAGTGTCCAGACACT+AGG	0.536972	4.1:-7017839	MS.gene70104:CDS
CAAGGAACTTCTTCGCTCAC+AGG	0.537318	4.1:-7021822	MS.gene70104:intron
GGGCTTGGAGAGTCATATGA+TGG	0.537593	4.1:-7022048	MS.gene70104:CDS
CATACAAGAGTTTCTCCCCT+AGG	0.539065	4.1:-7017651	MS.gene70104:CDS
GCACATTGTCAAATCAGGTA+TGG	0.544177	4.1:-7015802	MS.gene70104:CDS
AGTTGGCAAAATGATTGCCC+AGG	0.544920	4.1:+7016823	None:intergenic
ATGACACAGTGCATGGTTTG+CGG	0.545427	4.1:+7018310	None:intergenic
TAAGAGCTGACTGGAAAAGA+AGG	0.545711	4.1:-7018371	MS.gene70104:CDS
GATGGAACCTTTCATTAGTG+AGG	0.545765	4.1:-7019523	MS.gene70104:intron
TGATGCAAGTTTAAGAGGAG+TGG	0.550030	4.1:+7014379	None:intergenic
CCTGCTGAAAGTATCGAAGA+TGG	0.555336	4.1:+7019650	None:intergenic
CCATCTTCGATACTTTCAGC+AGG	0.562118	4.1:-7019650	MS.gene70104:intron
GGAAAAGTTCATTCATGCAA+AGG	0.563440	4.1:-7016600	MS.gene70104:intron
TAGCTCCTCCCAAACTGAGT+TGG	0.566064	4.1:+7016806	None:intergenic
TGGTAAACCTGAACCAGACT+GGG	0.568654	4.1:-7017518	MS.gene70104:CDS
CAAGACGTTGACACCCCTGT+TGG	0.569737	4.1:-7016762	MS.gene70104:CDS
TGGAAATACCTCTTCTATGA+CGG	0.569785	4.1:+7019977	None:intergenic
GACTGGGCATCTTTAAACCT+CGG	0.575985	4.1:-7017502	MS.gene70104:CDS
ATATCAGCTACTGAATCAGA+TGG	0.577757	4.1:-7019541	MS.gene70104:CDS
TATGAGCAGATCCACCATGC+CGG	0.579384	4.1:+7015532	None:intergenic
GGCTTGGAGAGTCATATGAT+GGG	0.582095	4.1:-7022047	MS.gene70104:CDS
TACATTACTGTATTATCAGA+GGG	0.583762	4.1:-7015460	MS.gene70104:CDS
CCACATGTAGCTGACAAAGA+AGG	0.585459	4.1:-7014404	MS.gene70104:CDS
TGGTGCTCTTAATAACATTG+AGG	0.586050	4.1:-7019722	MS.gene70104:CDS
CTTACATATGACACAGTGCA+TGG	0.587318	4.1:+7018303	None:intergenic
CTGCTGAAAGTATCGAAGAT+GGG	0.589891	4.1:+7019651	None:intergenic
AGCAAAACCTCACTAATGAA+AGG	0.590028	4.1:+7019516	None:intergenic
CCTAACAAGTGACGCCGGCA+TGG	0.591370	4.1:-7015546	MS.gene70104:CDS
GTGCTACAGACCTTTCATCA+TGG	0.591447	4.1:+7018106	None:intergenic
CATCTGTGCCAATGACAAGA+AGG	0.591665	4.1:-7015835	MS.gene70104:CDS
CTACATTACTGTATTATCAG+AGG	0.592918	4.1:-7015461	MS.gene70104:CDS
GACACTTGATGTGAAAGTCT+GGG	0.593050	4.1:-7016874	MS.gene70104:CDS
TGTTGACATCAATGAAGTCA+AGG	0.593330	4.1:-7021683	MS.gene70104:intron
GCTTTCTTCTCATTACCATG+GGG	0.594930	4.1:-7018133	MS.gene70104:CDS
GGAATCTGCCGCAAATGGAA+AGG	0.597456	4.1:-7018565	MS.gene70104:intron
AAGAATAGTCCCACTGACAA+TGG	0.598139	4.1:-7018177	MS.gene70104:CDS
TACCTGATTTGACAATGTGC+TGG	0.599784	4.1:+7015805	None:intergenic
AGCTGCCCTTGTCTATGACC+AGG	0.600609	4.1:-7020366	MS.gene70104:intron
GGCCCTAATGGCTCTCCTAG+TGG	0.601538	4.1:-7018642	MS.gene70104:CDS
CTTTCTTCTCATTACCATGG+GGG	0.602249	4.1:-7018132	MS.gene70104:CDS
TGAAAATGCTTGCCTACTGA+TGG	0.603510	4.1:+7015770	None:intergenic
TTTGCAATGTAGTTCATGCA+AGG	0.606311	4.1:-7016684	MS.gene70104:intron
AGAAAATGCAGTGGACCAGA+TGG	0.609179	4.1:-7017897	MS.gene70104:CDS
GAGAGAAATCACTACATACA+AGG	0.609949	4.1:-7021840	MS.gene70104:CDS
AGTGATTTCTCTCAAAGCAA+TGG	0.613755	4.1:+7021850	None:intergenic
TATTGCCACCGTCATAGAAG+AGG	0.614019	4.1:-7019985	MS.gene70104:intron
CATTGACAATTTGTAATAGG+CGG	0.615468	4.1:+7021704	None:intergenic
AAATACCTCTTCTATGACGG+TGG	0.615483	4.1:+7019980	None:intergenic
CTGCAAAAGTGCTTCTTACG+AGG	0.616206	4.1:-7015427	MS.gene70104:intron
GCAGCAATCCGTCATCTCCA+AGG	0.617495	4.1:-7018200	MS.gene70104:CDS
CTGATAATACAGTAATGTAG+TGG	0.617945	4.1:+7015464	None:intergenic
AATTGATAAGAACCTGTTGG+CGG	0.618179	4.1:+7022318	None:intergenic
TGGATGTCAATACCATCAGT+AGG	0.620584	4.1:-7015782	MS.gene70104:CDS
AGCCCAGAACCATTGTCAGT+GGG	0.622541	4.1:+7018168	None:intergenic
AGAAGCTGCAAGTTCTACAA+AGG	0.622926	4.1:-7022180	MS.gene70104:CDS
AATGACAAATGCGCTGATTG+TGG	0.625890	4.1:-7017538	MS.gene70104:CDS
GTGGATCTGCTCATACAGCA+TGG	0.627918	4.1:-7015524	MS.gene70104:CDS
AAGCCCAGAACCATTGTCAG+TGG	0.631638	4.1:+7018167	None:intergenic
CAATGCATATAAGGATGCCG+AGG	0.639293	4.1:+7017485	None:intergenic
AACAAGTGACGCCGGCATGG+TGG	0.640029	4.1:-7015543	MS.gene70104:CDS
TAAGTACCTGGTCATAGACA+AGG	0.647422	4.1:+7020360	None:intergenic
ACGCTTGTGATTCAAGAGGT+CGG	0.648808	4.1:-7015490	MS.gene70104:CDS
AGTGGACCAGATGGATTGGA+TGG	0.649948	4.1:-7017888	MS.gene70104:CDS
GTTGGCAAAATGATTGCCCA+GGG	0.650511	4.1:+7016824	None:intergenic
TAGGTTCAAATCATTCGACA+AGG	0.650943	4.1:-7018420	MS.gene70104:CDS
GGATGTGCAGAGTCTCCACT+AGG	0.652588	4.1:+7018627	None:intergenic
AAATCAGGCAGAAAATGCAG+TGG	0.659199	4.1:-7017906	MS.gene70104:intron
TTTGCAATTCTTACCCAACA+GGG	0.659233	4.1:+7016748	None:intergenic
TGCAGGTGACTCTTTCAATG+CGG	0.662605	4.1:-7015660	MS.gene70104:intron
ATAAACGCTTGTGATTCAAG+AGG	0.664347	4.1:-7015494	MS.gene70104:CDS
ATAGGCGGTCATCAATCAAG+TGG	0.674675	4.1:+7021719	None:intergenic
TAGTGTCTGGACACTCAACA+AGG	0.675887	4.1:+7017841	None:intergenic
TTGCAATTCTTACCCAACAG+GGG	0.676651	4.1:+7016749	None:intergenic
GCTTGGAGAGTCATATGATG+GGG	0.679261	4.1:-7022046	MS.gene70104:CDS
CAAACATACTTAAGACAGAG+TGG	0.689585	4.1:+7016850	None:intergenic
AAGTACCTGGTCATAGACAA+GGG	0.692180	4.1:+7020361	None:intergenic
GCTTGCCTAACAAGTGACGC+CGG	0.698335	4.1:-7015551	MS.gene70104:CDS
TGCACGTAAGTGGTTCCTAG+GGG	0.713464	4.1:+7017636	None:intergenic
TGTCTGGACACTCAACAAGG+AGG	0.746413	4.1:+7017844	None:intergenic
TCTAGATGAAGATCACACTG+AGG	0.773504	4.1:-7017686	MS.gene70104:CDS

CRISPR-GE

badsite warning	sgRNA_sequence	Strand	Position	Region	GC_content

Chromosome	Type	Strat	End	Strand	Name
chr4.1	gene	7014328	7022375	7014328	ID=MS.gene70104
chr4.1	mRNA	7014328	7022375	7014328	ID=MS.gene70104.t1;Parent=MS.gene70104
chr4.1	exon	7022331	7022375	7022331	ID=MS.gene70104.t1.exon1;Parent=MS.gene70104.t1
chr4.1	CDS	7022331	7022375	7022331	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7022165	7022241	7022165	ID=MS.gene70104.t1.exon2;Parent=MS.gene70104.t1
chr4.1	CDS	7022165	7022241	7022165	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7021974	7022074	7021974	ID=MS.gene70104.t1.exon3;Parent=MS.gene70104.t1
chr4.1	CDS	7021974	7022074	7021974	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7021823	7021893	7021823	ID=MS.gene70104.t1.exon4;Parent=MS.gene70104.t1
chr4.1	CDS	7021823	7021893	7021823	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7021684	7021746	7021684	ID=MS.gene70104.t1.exon5;Parent=MS.gene70104.t1
chr4.1	CDS	7021684	7021746	7021684	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7020367	7020411	7020367	ID=MS.gene70104.t1.exon6;Parent=MS.gene70104.t1
chr4.1	CDS	7020367	7020411	7020367	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7019986	7020051	7019986	ID=MS.gene70104.t1.exon7;Parent=MS.gene70104.t1
chr4.1	CDS	7019986	7020051	7019986	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7019830	7019877	7019830	ID=MS.gene70104.t1.exon8;Parent=MS.gene70104.t1
chr4.1	CDS	7019830	7019877	7019830	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7019651	7019746	7019651	ID=MS.gene70104.t1.exon9;Parent=MS.gene70104.t1
chr4.1	CDS	7019651	7019746	7019651	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7019524	7019565	7019524	ID=MS.gene70104.t1.exon10;Parent=MS.gene70104.t1
chr4.1	CDS	7019524	7019565	7019524	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7018566	7018781	7018566	ID=MS.gene70104.t1.exon11;Parent=MS.gene70104.t1
chr4.1	CDS	7018566	7018781	7018566	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7018308	7018439	7018308	ID=MS.gene70104.t1.exon12;Parent=MS.gene70104.t1
chr4.1	CDS	7018308	7018439	7018308	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7017999	7018223	7017999	ID=MS.gene70104.t1.exon13;Parent=MS.gene70104.t1
chr4.1	CDS	7017999	7018223	7017999	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7017835	7017921	7017835	ID=MS.gene70104.t1.exon14;Parent=MS.gene70104.t1
chr4.1	CDS	7017835	7017921	7017835	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7017441	7017761	7017441	ID=MS.gene70104.t1.exon15;Parent=MS.gene70104.t1
chr4.1	CDS	7017441	7017761	7017441	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7016762	7016907	7016762	ID=MS.gene70104.t1.exon16;Parent=MS.gene70104.t1
chr4.1	CDS	7016762	7016907	7016762	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7016601	7016694	7016601	ID=MS.gene70104.t1.exon17;Parent=MS.gene70104.t1
chr4.1	CDS	7016601	7016694	7016601	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7015769	7015919	7015769	ID=MS.gene70104.t1.exon18;Parent=MS.gene70104.t1
chr4.1	CDS	7015769	7015919	7015769	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7015428	7015677	7015428	ID=MS.gene70104.t1.exon19;Parent=MS.gene70104.t1
chr4.1	CDS	7015428	7015677	7015428	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1
chr4.1	exon	7014328	7014436	7014328	ID=MS.gene70104.t1.exon20;Parent=MS.gene70104.t1
chr4.1	CDS	7014328	7014436	7014328	ID=cds.MS.gene70104.t1;Parent=MS.gene70104.t1

Gene Sequence

>MS.gene70104

ATGCATTTTTCAAATCTTGATGACACTCCTATGTTCCGCCAACAGGTTCTTATCAATTTCTGATCCTTCATCTCGTTATTCATTGATGATTAATTTATAAATAAATAAAATTATGAATGAATTGATTGATGCAGCTTCTATGCTTAGAGGAAAGTGCAGAATCATTACGCCTTAGAAGCTGCAAGTTCTACAAAGGATGCCGAAAATATACGTAAGTATTGTAACGTTTTCCTTCATTATTCAATCATTTCAATTTCCCACTCTTTTTTCTTAATTTACACTGCTTACTTACTTTTCATAGGGAAGGGCTTGGAGAGTCATATGATGGGGACATCGCATTTATAAGTTCCCTTGATAGTTTTGGAGGAGGCCATACTGATCCTCATTTTGTTGCTTTGGGAGGTAAGTCCGTTTAATTAAACATTAATTTTAATCTTTTCTCTTCATTTTAATCAATTTTGTTTTGTTTTCGCTACTCCCAGGACCTGTAATGAACAAATTTACCATTGCTTTGAGAGAAATCACTACATACAAGGAACTTCTTCGCTCACAGGTAATCATTATCTATTGAAGTTTTATTTGTCAATTGATATTGCTCTATGCTGACTGTACTTAATACTGCTTCTTAGGTAGACCACTTGATTGATGACCGCCTATTACAAATTGTCAATGTTGACATCAATGAAGTCAAGGTATGCTTTTAGATACTTTTTTTTTTTAATGTTTATACTTGCGGTGTTTGTTCGTATACATTAAGCCTATGGAATGTTAAGGTTTCATACTTTATATGGCCTATTTAAGTAGTGATAAAGAAGTACGACGGTGCCCTTCCTCTCTCAAGTTGTTATTGTACAGCTCTTGGTTTTTGACAAGTTTCTTCAATAGTATTTACCACAATGTGGTGTCTATGAAACGAAATCACCATATTCAGTTGTGCTATTACAATGGGATTGATAACTAATTTGTGCAGCAAGGAACAACTTAAATAATCTATTTAATAGCATTCGAGCATATGGAAAAGACTAAACTAAATAGTTTAACTCAATCTTTTGCAATACAGATTAATATATGAAGTAATATAGATTAATATAGAGAGCATGATATGTGCAGCCAATACACACATTTTCCTACAAATAGCTTGATGATAGCTGAGGACAGCGATGAAAAACTATAGATCAAACCGTTAAAAGAGATTTAGATGTAAACATACATCTCTAAAATAAAGACATGATAGGGAATTACGTTGTTTGGTCAGGGTGATACTATAGCACAACAGACAAAGAATGTTCCAGGTACTTAGAGTGCAATCCAAGATCTTTTGGACTAAATGTAAATCCATTAATAACTCTATGATTAAGGTCTCTTATTGGCCTAATAGCTTGAAACACTTAGTTATGAATAACTAAGTTAAGTACTTCCAAAATTTCATTATGCTTATCTTCAGGATACCCTAGATCTAGAATCTTATTTTGCTTCTAATTTGAATCCTAAGTACTCCTTACCAGTAAACACTGTTGTGTATGACTCATATTTACTGGTAAGTGGTCAGTCACTCAAGCATAGCGAAGCAAAGAGAGTGGAGCTGAAAGCATAACGAGGGAAGTGGAGCGTGTGAAGTAATTTGTAACCCTAAGCTTACTTAATAGACATCACAATAGCTACTCTGCTGTCTAAGACATAGGACAATTGGCTGGCCTCTGTGATCAATCGGCTGCGCTCGTGTGTGTTTTATCCATTTTCTTTAAATCTGGATTTGCTGTTCAAACACATAGCTAATATTATTTTGGGGAAAACATCACTATCATAAGACTACTCATTGTGAAAATTACCATTGTTCAGTTTTAAAGATGGCCACTCTTTAGCCTGATTTTTTATGTCAGTGCACATTCAAATTTCACCTTTGTATGACTGGTATAAGTATATCTTTTATTTTTCCCTTCTAACAGTTCAAGCAACGCTTGCAGGAAGCTCGTAAGCGTTTTGACAAAGCTGCCCTTGTCTATGACCAGGTACTTATTGTGAAAAGATTTCAGAGAGTGATGAACTCTTCATCCATAGATTTACTTTCCTTCTGTTACACACGTTTAGCTGTATTTACTGAATCAGAAACCCATTTTGATGTAATTGCAATTTTCTTGTGGTATAATCAACTGCCAACAAGATTCATGGAGTTTCTACTTTGGGAAATTTCTAGCATTTAAATTAATTTGAGTTTGTAGTACTTTGGAAGGAGTATGTGTTTCTGTGTCTAGTGTAGTGCTGCTGAAAGGTCACCCACATATTTTATTTTTTCTAACACAAGCAATGTGGATTTTCTGATACAGGCACGTGAAAAGTTTATGTCACTGAGAAAAAGCACTAAGATTGATATTGCCACCGTCATAGAAGAGGTATTTCCAGTAGCTTTTCTTTGCCTTTTCTAATTCATAAGTTAATCCAATAGCTTGTTTGAGTTACTATTATTCTTTTGAATCTAATTTGGTATAGTGACATTCCAGGAATTGAAGAATGCAAGAACGTCGTTTGAGGAAGCCCGTTTCAGTCTGGTATTTTACTTGCACAGGATATGCTCATCTGAATAAAAGATGTATATCATTAGGTCTTATACATAACATATTTCATGACCTAGGTTGGTGCTCTTAATAACATTGAGGTCAAGAAGAGATTTGAGTTTTTAGAGGTTGTCACTGGAATTATGGATGCCCATCTTCGATACTTTCAGCAGGCATATGACAATCACATAAATGGCTCTTTTCCATATGTAGTATTGCATTTATGCTATATATATCTGAAAACTCTTTCTCTTGCAGGGATATCAGCTACTGAATCAGATGGAACCTTTCATTAGTGAGGTTTTGCTCTTATCTCAATTTTTGCTTGATATTACACAGTACGTTTCACAGAAAAGTATATATGATTTTCTATTGATTTTTCTAAAATTATAAACCAAGGGGGATCAAGCAGCTGAAACATAGTTAATTTATCTACCATCTGACTATTGGGTTAGTAACTTAGCAAAACACGTTTGAAATTGCTGGTGTAGCGTACTTAAAAACCCAAAACCTTGAACCACCGGTGGGGTCATCCAGACGTGAAACCACCAGTTAACCCCAGTGACATGTTTGCTTCCAAGCATATTGTTATTTCTGTGTGTGTGTAATCAGATCACACAACATGTATTTTTAATAGTGTTACAATAAATACATTGAATAAGCACTAACCTAGGAAGTTGTATAATACTAGGAATATTAATAATCAATCTACAAATTCTTAATTCTAGCACATAATAAATTTTGGCTTGAAATTTTAATTGGCGTTTTCAATATGTTGATTGAATGTAATATCTTTTTCCTGTGTGCAAGGCACCATTTTTTGTTGTCTTAGAAATTAATTTCTATAGCATTAATTAATATTTATAGTCAATTTAGTGGTTAAAATGAGAAACTATACCTGATAGTCTTTCATGTGAGCCACAATATTAGTCTAAGCGTGGGCATTACTAACTGAAGTTTGTGAACTATTTTTTCTCAACCTGGTGTTTAAGAAGTAAGGGGTAGAATGCTTAAATATCTGACTAAGCAAGCTATGTTGCAGGTTTTGGATTATGTACAACAGTCAAAAGAAAATTTTGATAAGGACCAGATTTTACTTTATAAAAAAATGCAAGAATACAAAAAACAAGTTTATCAAGATAGTAGGCTGTCCTTGAATGGCCCTAATGGCTCTCCTAGTGGAGACTCTGCACATCCCTTTTCTAGGATATCAAATGAAGTAGTAGATGTTGTAAAGGAATCTGCCGCAAATGGAAAGGTATTCTAGAATACATTTCCTTCTTTCTCTGAGAATATGTAGCACTTAATTTTACAACTTTTCAATTTTGACTTCTGTTACTGGCCAAAACAATATCCATTTGTTCATCTCGTGGACAAAGTTTAGGTTCAAATCATTCGACAAGGATATCTTTCAAAGCGATCTTCCAATTTAAGAGCTGACTGGAAAAGAAGGTATTTTGTTCTTGATAGTCGAGGAATGTTGTACTACTACCGCAAACCATGCACTGTGTCATATGTAAGTCAGCAACTGTACTCAAACTTTCAACACACTAAACCAGATGATGTGTATTCTTATTAAATGCTGAGCATTCTGTTTCAGGGCAGCAATCCGTCATCTCCAAGGAAGAATAGTCCCACTGACAATGGTTCTGGGCTTCTGGGTCGATGGCTTTCTTCTCATTACCATGGGGGTGTCCATGATGAAAGGTCTGTAGCACGTCATACTGTAAACCTGCTAACATCAACTATAAAGGTTGATGCAGATCAGTCTGATTTAAGATTCTGCTTCAGAATAATTTCTCCATCAAAGAACTATACATTGCAGGTATTTATTCTTAAAATTTATCAATGCATAGTTAGTCCTTTATTGTTGCTTATATGACACTAAGGAAATCAAATCAGGCAGAAAATGCAGTGGACCAGATGGATTGGATGGAAAAGATAAATGGAGTAATTGCCTCCTTGTTGAGTGTCCAGACACTAGGATCTGTATGTAATATATTTATTTTTTAAAAATACATATTTGATCTCCATTCTAATTTTGATTGCTATTATGTGACAGCCTCTATCAGCTAAGTCAGAAAATGGTGATGCTTACTTTGCCGACAAGAGTTCTCTAGATGAAGATCACACTGAGGTCAAAAGGTCTTCATACAAGAGTTTCTCCCCTAGGAACCACTTACGTGCATCTAAAAGTATGCAGTTGCAAAAACACAGTATAAGAAATGAAAAACCTATTGATGTTCTTAGAAAGGTGAATGGGAATGACAAATGCGCTGATTGTGGTAAACCTGAACCAGACTGGGCATCTTTAAACCTCGGCATCCTTATATGCATTGAATGCTCTGGTGTTCATCGTAATCTTGGAGTGCATATATCAAAAGTAAGTGTTTGAGGTGACACATTACTCTTAGCCTTCAATGTTGTAGATGGTTTATATCTAGTCAACTTTTACTGAATAAAAGCTAAAACAGGGTTAAAGGACCTCTGACCTGCTAGCTAACAATGGTTACTCTTCGCTGTATGAAGATCGATAACGGTAGCCATTCAAATTATAAATAGGAGAAAAAATTTCATGTCGTAGACACCACATTTGGACTCATTTTATATCTTTAAGCTTAGTGAGTCCCATTGCTGCCAAATTTTAAGACAATTTTTTTTTTATTCGAATTTCTTTTTAAAGACAATTTGATTACAATTGACCGATCAAAACTTAATAAGAACAAGTCGGTTTTACACAGTTACACCAAAACGGTTTTACATTGCATGCCGTGATATTTTTTGACAGTTGCCTTGTATTTTTAGTGGTAAACAGTATGAACAGTTGGTAAAGAACTATTTCTAAGTTTTCCAAAACAAAATCCTTTTTGTTTTAATTTCCACTTTTGTTGCTAAGGTAGAAAATATTTTTGGCAGGTAAGATCTCTGACACTTGATGTGAAAGTCTGGGACCACTCTGTCTTAAGTATGTTTGAGTCCCTGGGCAATCATTTTGCCAACTCAGTTTGGGAGGAGCTATTATGTTCAAGTAGTACTTTGCAAGACGTTGACACCCCTGTTGGGTAAGAATTGCAAAACTTGATGAGATTATCTCTTTGAACTTATGCTAATATGCACTTTGCAATGTAGTTCATGCAAGGCAAACAGAGACAACCTATTTCATGCAAGAAAACCAAAACATGATGATTCTATTTCATTAAAGGAAAAGTTCATTCATGCAAAGGTAAACCTTCGAGAACTTTATGTTTCTTTTGCCGTGTTTAGAAAAATGAAGGAAGCTTGAATCCTTCTGATAGGAACCAGATAGACAGAAGTAGATGAAGAAGAAATAGTACTCTCTATTGAAGAAACTATCAAACCGGGGAAGAAATCATCTCTGCCATATGTTGCTGAAACTGTAAAACTAAGATAACAATGGAATAGTACCATAAAGCGGTGGAGTCAGTTGTTACATGAGACCAAAAATAGAAAGAAAAAAAAAGGTTTTAATGATTAATCGTTAATCGTGAACAATTTAATATTTATGTTTCTTTTTATCGTTTTAATTCTCTTTAACTGAAGGACATTTTGGGTCTCGGTTGTACCAAATCTCTTTGGGGACTACTCGATCTCAAATCAAATCACAGCCAAGCCAATTTACGTACAATTTAGCCTGTCATGCCCCTTTCTTACAGTGCAAAATCATGTCTGAAACCCCAAAGGCATTTTGATAATGGGATTATAAAATGCTTATACTGAATATTTGGTAACTGTGTTATTTCTTATTTTAAAATAGGTTTACCCTTTTTCCCGTTATTACTTCTTCATGATTTCTAGCATTTAGTAGCATTCTTATTCTCGAATTATTACCTGGTAGAAGTTTAACATACTGGAGACAGAACTTAATAGTTTCTACTTATTGCAGTATGCTGAGAAAATATTTATTTGCCGGACAGAGAAAAATCTTGCACAACAGATGTTAAAAAGCATCTGTGCCAATGACAAGAAGGCAGCATACCAGCACATTGTCAAATCAGGTATGGATGTCAATACCATCAGTAGGCAAGCATTTTCAGGTACGTCTTCTTGCCCCAGTTAATCTCTGCTCCAAAAAAGTTTTTGACGTTGAAAACCCAGGAAGTCCTCAAAGAATTAGTTACTGTGCAGGTGACTCTTTCAATGCGGCTTCTTTCATTAATTCAAACATTTCATCTGAAAATGAGAGTCAATTGACTGACGACATACAAAATGGTTCTAGTGCGATTCACCTGGCTTGCCTAACAAGTGACGCCGGCATGGTGGATCTGCTCATACAGCATGGAGCAGATATAAACGCTTGTGATTCAAGAGGTCGGACACCACTACATTACTGTATTATCAGAGGGAAGCCTGCAGCTGCAAAAGTGCTTCTTACGAGGTATCGTAGACATTTTCAACCATTGTATTATATGCCCGAACTCACCTTATGTGATCAAATAATTACTCCCTCCGTTTCAAAGTATATGTCGCAGTCAACCGCTGCACACGTGCCAATACACAATTTTGACCATTAATGTTTGTAATTATCTATAATAAAAAAATTATAAAAATTTGATATTTTGAAAATATTCATCGAGATAAATCAAACATCTTACATGCTAACATTTGTATTTATATATTAGTTAAAAAATATGTTCAAAGTAAGGTAGATAAATAGTGCACATTTTAAAATTACGACGTGTATTTAGAAATAGAGGGAGTAGTATTTAATGACCCATTTGCTCTGTAAACTAGAGAAGATGTCAAACTTTTGGTGTTATCTATCTTACATACATGCTAAACATGAGTACTTGAAGAACTTTGTAAAATTTGAACTGTTAATGCACTCTTCCAAATACACGTTAAAATGATAAATACATTTATTGCTACTCTTTTCTTCATTTCCACATATTGGAATAGTAGTACTTCCAACTTGCTTGGAATAGTAGCATTCTTCCAAATACACATTAAAAATGATAAATACGTTTATGCTGATAAACAATTTTTCAATGATTTAATTCTGTTTATGTCATTTCTAAACTTCTACTGTCATTTCATTTGGTAATGATACCATTTTCGTAGTTTGCTGTTGCAATGTGTTTTCCCTTTTTTCTGTTTTATTACGGAAGTAGAGAGAGTGTGTCTGTGGTTCATTATTGTCACGTTGTACACTAGTGGATTGAAACATCTTCCAGTTAATGAGTTTTATAATTGACCGTGAATGAATTTGCTTTATCACAATACCACGATAAATGTTGCATTGAGATATTAAACTTAAGTTAAAGTCATGGAAATTTTCCTCGTTCATACATTATCTCATAAGCTGTTTCATGGTTGATATTTTCTGGTATACTTGGAAAAATTTACTTAGTTATCAATCATTTTTACAGGGGGGCCAATCCACATGTAGCTGACAAAGAAGGCACCACTCCTCTTAAACTTGCATCAAAAACCGGCTGTGTTGGCAATGAAATTCTCACTCTCTTGGAAAAAAGATGA

Protein sequence

>MS.gene70104.t1

MHFSNLDDTPMFRQQLLCLEESAESLRLRSCKFYKGCRKYTEGLGESYDGDIAFISSLDSFGGGHTDPHFVALGGPVMNKFTIALREITTYKELLRSQVDHLIDDRLLQIVNVDINEVKEARKRFDKAALVYDQAREKFMSLRKSTKIDIATVIEEELKNARTSFEEARFSLVGALNNIEVKKRFEFLEVVTGIMDAHLRYFQQGYQLLNQMEPFISEVLDYVQQSKENFDKDQILLYKKMQEYKKQVYQDSRLSLNGPNGSPSGDSAHPFSRISNEVVDVVKESAANGKVQIIRQGYLSKRSSNLRADWKRRYFVLDSRGMLYYYRKPCTVSYGSNPSSPRKNSPTDNGSGLLGRWLSSHYHGGVHDERSVARHTVNLLTSTIKVDADQSDLRFCFRIISPSKNYTLQAENAVDQMDWMEKINGVIASLLSVQTLGSPLSAKSENGDAYFADKSSLDEDHTEVKRSSYKSFSPRNHLRASKSMQLQKHSIRNEKPIDVLRKVNGNDKCADCGKPEPDWASLNLGILICIECSGVHRNLGVHISKVRSLTLDVKVWDHSVLSMFESLGNHFANSVWEELLCSSSTLQDVDTPVGSCKANRDNLFHARKPKHDDSISLKEKFIHAKYAEKIFICRTEKNLAQQMLKSICANDKKAAYQHIVKSGMDVNTISRQAFSGDSFNAASFINSNISSENESQLTDDIQNGSSAIHLACLTSDAGMVDLLIQHGADINACDSRGRTPLHYCIIRGKPAAAKVLLTRGANPHVADKEGTTPLKLASKTGCVGNEILTLLEKR