Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70278.t1 | XP_003630170.1 | 79.2 | 567 | 29 | 2 | 1 | 478 | 1 | 567 | 1.30E-211 | 745.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70278.t1 | Q5RC80 | 44.5 | 391 | 189 | 12 | 96 | 476 | 139 | 511 | 1.6e-72 | 275.0 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70278.t1 | G7LC87 | 79.2 | 567 | 29 | 2 | 1 | 478 | 1 | 567 | 9.4e-212 | 745.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene059935 | MS.gene70278 | 0.814859 | 1.24E-51 | -1.69E-46 |
| MS.gene060830 | MS.gene70278 | 0.804434 | 2.16E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene73119 | MS.gene70278 | PPI |
| MS.gene064542 | MS.gene70278 | PPI |
| MS.gene70278 | MS.gene008393 | PPI |
| MS.gene035805 | MS.gene70278 | PPI |
| MS.gene05085 | MS.gene70278 | PPI |
| MS.gene049629 | MS.gene70278 | PPI |
| MS.gene55683 | MS.gene70278 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70278.t1 | MTR_8g092550 | 96.750 | 400 | 13 | 0 | 79 | 478 | 168 | 567 | 0.0 | 801 |
| MS.gene70278.t1 | MTR_8g092550 | 98.571 | 70 | 1 | 0 | 1 | 70 | 1 | 70 | 1.64e-36 | 142 |
| MS.gene70278.t1 | MTR_3g095230 | 84.772 | 394 | 51 | 4 | 92 | 477 | 194 | 586 | 0.0 | 692 |
| MS.gene70278.t1 | MTR_3g095230 | 84.595 | 383 | 50 | 4 | 92 | 466 | 194 | 575 | 0.0 | 672 |
| MS.gene70278.t1 | MTR_7g106440 | 27.411 | 197 | 131 | 5 | 99 | 288 | 95 | 286 | 8.97e-13 | 69.7 |
| MS.gene70278.t1 | MTR_4g104470 | 25.510 | 196 | 110 | 6 | 107 | 288 | 117 | 290 | 1.94e-12 | 68.2 |
| MS.gene70278.t1 | MTR_1g020080 | 27.869 | 183 | 114 | 7 | 114 | 288 | 191 | 363 | 2.09e-12 | 69.3 |
| MS.gene70278.t1 | MTR_7g094660 | 27.225 | 191 | 118 | 8 | 107 | 287 | 634 | 813 | 2.10e-12 | 70.1 |
| MS.gene70278.t1 | MTR_8g463890 | 24.895 | 237 | 164 | 3 | 94 | 330 | 54 | 276 | 1.94e-11 | 66.2 |
| MS.gene70278.t1 | MTR_7g096260 | 28.497 | 193 | 112 | 7 | 107 | 287 | 493 | 671 | 1.98e-11 | 67.0 |
| MS.gene70278.t1 | MTR_7g096260 | 28.497 | 193 | 112 | 7 | 107 | 287 | 479 | 657 | 2.03e-11 | 66.6 |
| MS.gene70278.t1 | MTR_1g064230 | 28.947 | 190 | 121 | 7 | 111 | 288 | 83 | 270 | 2.20e-11 | 64.7 |
| MS.gene70278.t1 | MTR_8g022050 | 28.230 | 209 | 125 | 8 | 101 | 303 | 51 | 240 | 2.28e-11 | 65.9 |
| MS.gene70278.t1 | MTR_4g122650 | 30.058 | 173 | 101 | 5 | 115 | 282 | 90 | 247 | 3.07e-11 | 66.2 |
| MS.gene70278.t1 | MTR_3g065190 | 25.954 | 262 | 166 | 10 | 109 | 365 | 20 | 258 | 3.33e-11 | 65.1 |
| MS.gene70278.t1 | MTR_3g084040 | 38.462 | 78 | 47 | 1 | 215 | 292 | 37 | 113 | 4.00e-11 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70278.t1 | AT5G09880 | 60.701 | 542 | 130 | 12 | 1 | 475 | 1 | 526 | 0.0 | 579 |
| MS.gene70278.t1 | AT2G16940 | 61.965 | 397 | 136 | 7 | 92 | 474 | 19 | 414 | 2.40e-162 | 466 |
| MS.gene70278.t1 | AT2G16940 | 61.965 | 397 | 136 | 7 | 92 | 474 | 19 | 414 | 2.40e-162 | 466 |
| MS.gene70278.t1 | AT2G16940 | 61.290 | 403 | 138 | 8 | 86 | 474 | 206 | 604 | 8.17e-160 | 466 |
| MS.gene70278.t1 | AT2G16940 | 61.697 | 389 | 135 | 6 | 99 | 474 | 168 | 555 | 8.87e-159 | 462 |
| MS.gene70278.t1 | AT2G16940 | 60.391 | 409 | 138 | 8 | 89 | 474 | 186 | 593 | 2.63e-156 | 457 |
| MS.gene70278.t1 | AT1G48920 | 29.240 | 171 | 112 | 3 | 113 | 276 | 297 | 465 | 1.33e-14 | 76.6 |
| MS.gene70278.t1 | AT3G14100 | 29.000 | 200 | 121 | 8 | 101 | 298 | 48 | 228 | 1.64e-12 | 69.7 |
| MS.gene70278.t1 | AT4G16280 | 30.636 | 173 | 100 | 5 | 115 | 282 | 122 | 279 | 2.61e-12 | 69.7 |
| MS.gene70278.t1 | AT4G16280 | 30.636 | 173 | 100 | 5 | 115 | 282 | 47 | 204 | 2.61e-12 | 69.7 |
| MS.gene70278.t1 | AT4G16280 | 30.636 | 173 | 100 | 5 | 115 | 282 | 122 | 279 | 2.67e-12 | 69.3 |
| MS.gene70278.t1 | AT1G54080 | 27.830 | 212 | 122 | 9 | 101 | 310 | 52 | 234 | 4.97e-12 | 68.2 |
| MS.gene70278.t1 | AT4G34110 | 28.743 | 167 | 102 | 4 | 114 | 278 | 37 | 188 | 1.18e-11 | 67.4 |
| MS.gene70278.t1 | AT3G52380 | 23.757 | 181 | 126 | 3 | 115 | 288 | 118 | 293 | 1.46e-11 | 65.9 |
| MS.gene70278.t1 | AT3G18610 | 30.323 | 155 | 96 | 4 | 113 | 262 | 324 | 471 | 2.01e-11 | 66.6 |
| MS.gene70278.t1 | AT2G37220 | 42.500 | 80 | 44 | 2 | 211 | 289 | 88 | 166 | 2.02e-11 | 65.1 |
| MS.gene70278.t1 | AT5G54900 | 28.070 | 171 | 107 | 4 | 122 | 288 | 170 | 328 | 2.59e-11 | 65.9 |
| MS.gene70278.t1 | AT3G18610 | 30.323 | 155 | 96 | 4 | 113 | 262 | 354 | 501 | 2.64e-11 | 66.2 |
| MS.gene70278.t1 | AT3G18610 | 30.323 | 155 | 96 | 4 | 113 | 262 | 384 | 531 | 3.34e-11 | 66.2 |
| MS.gene70278.t1 | AT5G61030 | 39.506 | 81 | 47 | 2 | 215 | 294 | 41 | 120 | 5.43e-11 | 63.9 |
| MS.gene70278.t1 | AT5G61030 | 39.506 | 81 | 47 | 2 | 215 | 294 | 41 | 120 | 5.43e-11 | 63.9 |
| MS.gene70278.t1 | AT4G27000 | 26.630 | 184 | 125 | 4 | 109 | 288 | 169 | 346 | 6.27e-11 | 64.7 |
| MS.gene70278.t1 | AT2G41060 | 27.778 | 198 | 119 | 5 | 85 | 271 | 100 | 284 | 7.40e-11 | 64.7 |
| MS.gene70278.t1 | AT2G41060 | 27.778 | 198 | 119 | 5 | 85 | 271 | 100 | 284 | 7.40e-11 | 64.7 |
| MS.gene70278.t1 | AT2G41060 | 27.778 | 198 | 119 | 5 | 85 | 271 | 100 | 284 | 7.40e-11 | 64.7 |
Find 133 sgRNAs with CRISPR-Local
Find 444 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TGCTCTTGAGTGGGCATTTA+AGG | 0.130464 | 4.1:+9013402 | None:intergenic |
| ACAGTTCTCTGATCCCTTTC+TGG | 0.134704 | 4.1:+9017171 | None:intergenic |
| TTTATATGAAGCCAAATTTA+AGG | 0.136565 | 4.1:-9012371 | MS.gene70278:CDS |
| TCAAGATTCGTCCTTAAATT+TGG | 0.179510 | 4.1:+9012360 | None:intergenic |
| ACTTGACTTGCAGGAGATTC+AGG | 0.222696 | 4.1:-9017227 | MS.gene70278:intron |
| AAGGCAGCTCAGAGTTTAAA+TGG | 0.226346 | 4.1:-9014324 | MS.gene70278:CDS |
| ACGGGACACTGCAAGGGTTT+TGG | 0.238665 | 4.1:-9014462 | MS.gene70278:CDS |
| TCAGAGGGTTTCACCATTAC+AGG | 0.275311 | 4.1:+9014960 | None:intergenic |
| TCAGAGTTTAAATGGGAAAT+TGG | 0.278327 | 4.1:-9014316 | MS.gene70278:CDS |
| CGTCGTCGGCGCCGTGCTTC+CGG | 0.318437 | 4.1:+9018930 | None:intergenic |
| TTGGATGAATCCTTGTCTTC+CGG | 0.347395 | 4.1:+9018998 | None:intergenic |
| CTCTCTGGCCAACTACTTCT+CGG | 0.351599 | 4.1:-9014987 | MS.gene70278:CDS |
| CTGTTTGGTTCAATTCTTCA+AGG | 0.356909 | 4.1:-9017601 | MS.gene70278:intron |
| ATGCTAAAAGCCTGCTGAAC+AGG | 0.358990 | 4.1:+9013237 | None:intergenic |
| TTTATGTCTATATCAAAATC+TGG | 0.362952 | 4.1:+9012986 | None:intergenic |
| GCCATTAATTAGTTGCTGTT+TGG | 0.366457 | 4.1:-9017616 | MS.gene70278:intron |
| TCCCTTTCTGGGTCTGCCTC+AGG | 0.382400 | 4.1:+9017183 | None:intergenic |
| CAGTTCTCTGATCCCTTTCT+GGG | 0.389571 | 4.1:+9017172 | None:intergenic |
| AATGGGAAATTGGAGATTGC+TGG | 0.395405 | 4.1:-9014306 | MS.gene70278:CDS |
| AGCATTGCTTATGCAAAGAT+TGG | 0.405628 | 4.1:-9013383 | MS.gene70278:CDS |
| ATTCCTACTGGTTCTGCCAC+AGG | 0.409863 | 4.1:+9013153 | None:intergenic |
| CCAATGGCAATTGCGCTCTC+TGG | 0.422721 | 4.1:-9015002 | MS.gene70278:CDS |
| GATTGCTGGCAGGACTATAA+AGG | 0.425387 | 4.1:-9014292 | MS.gene70278:intron |
| TTTCTGTCCACTGCTCCATA+TGG | 0.427406 | 4.1:+9014882 | None:intergenic |
| TCCTACTACAGCAGCTCCAC+TGG | 0.439958 | 4.1:+9014905 | None:intergenic |
| GTTGATCACAGCTATCTTCA+TGG | 0.448889 | 4.1:-9012658 | MS.gene70278:intron |
| TACAGATCATGTTGGAAGTC+AGG | 0.450670 | 4.1:-9014166 | MS.gene70278:CDS |
| CCAGAGAGCGCAATTGCCAT+TGG | 0.454319 | 4.1:+9015002 | None:intergenic |
| CTTCGACGAATACGAGTACT+TGG | 0.454962 | 4.1:-9019041 | MS.gene70278:CDS |
| GAAGACGGTGGAGGAGCAAC+CGG | 0.456880 | 4.1:-9019017 | MS.gene70278:CDS |
| CTTGACTTGCAGGAGATTCA+GGG | 0.457008 | 4.1:-9017226 | MS.gene70278:intron |
| ATCTCGACGGCGGCGAAGAT+AGG | 0.458271 | 4.1:-9018907 | MS.gene70278:CDS |
| TTAAATCCGAGAGGACTTAC+CGG | 0.460777 | 4.1:-9018949 | MS.gene70278:CDS |
| CTTCAATAATAAACACTCGC+TGG | 0.462607 | 4.1:+9013128 | None:intergenic |
| ACTTCTCGGGCAACCTGTAA+TGG | 0.467311 | 4.1:-9014973 | MS.gene70278:CDS |
| ATTGGTGTGCCAACTGTGAA+TGG | 0.468260 | 4.1:-9013267 | MS.gene70278:CDS |
| TCAAGACGATCTAAAGGAGT+TGG | 0.473620 | 4.1:-9016624 | MS.gene70278:CDS |
| TCATCACAAACCTCGGTGCT+TGG | 0.475999 | 4.1:+9013093 | None:intergenic |
| TGAGCCATTTGGTCAGATTG+AGG | 0.478316 | 4.1:-9014511 | MS.gene70278:CDS |
| ACTGGTTCTGCCACAGGGGT+AGG | 0.482776 | 4.1:+9013159 | None:intergenic |
| TCCAGTGGAGCTGCTGTAGT+AGG | 0.485655 | 4.1:-9014906 | MS.gene70278:CDS |
| GCTGCTGTAGTAGGACCATA+TGG | 0.489254 | 4.1:-9014897 | MS.gene70278:CDS |
| TGGGTCGGTTCCTGTTCAGC+AGG | 0.500444 | 4.1:-9013247 | MS.gene70278:CDS |
| TATGAGTTCTTCTCGAAAGC+TGG | 0.501029 | 4.1:-9016985 | MS.gene70278:CDS |
| CTGCCTTTGCATGTTCAAGA+TGG | 0.501167 | 4.1:+9014340 | None:intergenic |
| GAGAGATGTCCGTCTGATCA+TGG | 0.501655 | 4.1:-9016655 | MS.gene70278:CDS |
| ACAACCTCAATCTGACCAAA+TGG | 0.502025 | 4.1:+9014507 | None:intergenic |
| AAGATCGTTCACGGTGTTCA+CGG | 0.502710 | 4.1:+9018804 | None:intergenic |
| GGTGTTCACGGTCACGTTCA+CGG | 0.504600 | 4.1:+9018816 | None:intergenic |
| TTGCTTATGCAAAGATTGGC+TGG | 0.505604 | 4.1:-9013379 | MS.gene70278:CDS |
| CAGGTTGCCCGAGAAGTAGT+TGG | 0.506510 | 4.1:+9014979 | None:intergenic |
| CACTCGCTGGGAATTCCTAC+TGG | 0.508916 | 4.1:+9013141 | None:intergenic |
| GTGCTTCCGGTAAGTCCTCT+CGG | 0.509691 | 4.1:+9018943 | None:intergenic |
| CAAGACGATCTAAAGGAGTT+GGG | 0.512572 | 4.1:-9016623 | MS.gene70278:intron |
| AGACATAAAAGAGGATGTAG+AGG | 0.512949 | 4.1:-9012972 | MS.gene70278:CDS |
| GAGGAAGAGTGTTCTAAATA+CGG | 0.513774 | 4.1:-9012953 | MS.gene70278:CDS |
| TCTCTGGCCAACTACTTCTC+GGG | 0.517772 | 4.1:-9014986 | MS.gene70278:CDS |
| CGACGAGAATGGCTCTAAGA+AGG | 0.519514 | 4.1:-9018858 | MS.gene70278:CDS |
| CTTCCTCTTGACATGGAGAC+GGG | 0.525930 | 4.1:-9014480 | MS.gene70278:CDS |
| TTCAATAATAAACACTCGCT+GGG | 0.527139 | 4.1:+9013129 | None:intergenic |
| TGCCTTTGCATGTTCAAGAT+GGG | 0.529504 | 4.1:+9014341 | None:intergenic |
| AAGAGTGTTCTAAATACGGC+CGG | 0.531925 | 4.1:-9012949 | MS.gene70278:CDS |
| TGATGATGATGAAGGAGGAT+TGG | 0.532759 | 4.1:-9014118 | MS.gene70278:intron |
| AACCTGAGGCAGACCCAGAA+AGG | 0.536328 | 4.1:-9017185 | MS.gene70278:CDS |
| TTCCTACTGGTTCTGCCACA+GGG | 0.541031 | 4.1:+9013154 | None:intergenic |
| AGGCAGCTCAGAGTTTAAAT+GGG | 0.544244 | 4.1:-9014323 | MS.gene70278:CDS |
| AGGAACTCAAGACGATCTAA+AGG | 0.546738 | 4.1:-9016630 | MS.gene70278:CDS |
| CTCTAAGAAGGATCGCGATA+GGG | 0.547806 | 4.1:-9018846 | MS.gene70278:CDS |
| CGCGGCGGAGACGACGAGAA+TGG | 0.548162 | 4.1:-9018869 | MS.gene70278:CDS |
| TGCCCATCTTGAACATGCAA+AGG | 0.550622 | 4.1:-9014343 | MS.gene70278:CDS |
| GCTCTAAGAAGGATCGCGAT+AGG | 0.550790 | 4.1:-9018847 | MS.gene70278:CDS |
| ATAACACCTGGATTGCCAAA+AGG | 0.554839 | 4.1:+9013213 | None:intergenic |
| GGAAATTGGAGATTGCTGGC+AGG | 0.559200 | 4.1:-9014302 | MS.gene70278:CDS |
| ACCTGAGGCAGACCCAGAAA+GGG | 0.563699 | 4.1:-9017184 | MS.gene70278:CDS |
| CATAAGCAATGCTCTTGAGT+GGG | 0.567427 | 4.1:+9013393 | None:intergenic |
| GGGGTAGGCATGACTTGTGT+TGG | 0.567564 | 4.1:+9013174 | None:intergenic |
| AGTGGACAGAAAATTGTATG+TGG | 0.570567 | 4.1:-9014871 | MS.gene70278:CDS |
| CAGGGATAAGAAAGAGAATG+TGG | 0.571250 | 4.1:-9017208 | MS.gene70278:CDS |
| CATGGAGACGGGACACTGCA+AGG | 0.573578 | 4.1:-9014469 | MS.gene70278:CDS |
| GTGGACAGAAAATTGTATGT+GGG | 0.575032 | 4.1:-9014870 | MS.gene70278:CDS |
| GCATAAGCAATGCTCTTGAG+TGG | 0.577589 | 4.1:+9013392 | None:intergenic |
| AAATATCGTACAGACCTTGT+GGG | 0.582490 | 4.1:+9013346 | None:intergenic |
| GTTCTTCTCGAAAGCTGGCA+AGG | 0.584609 | 4.1:-9016980 | MS.gene70278:intron |
| AACGAGCAATGCACATGAGA+TGG | 0.585575 | 4.1:-9012692 | MS.gene70278:CDS |
| GCCGCCGTCGAGATCGTCGT+CGG | 0.592650 | 4.1:+9018916 | None:intergenic |
| AATTTGGCTTCATATAAATG+TGG | 0.592878 | 4.1:+9012376 | None:intergenic |
| TTGGTGTGCCAACTGTGAAT+GGG | 0.595348 | 4.1:-9013266 | MS.gene70278:CDS |
| TCGACGGCGGCGAAGATAGG+CGG | 0.595350 | 4.1:-9018904 | MS.gene70278:CDS |
| TGATGCGATGTCAGTGCCAA+TGG | 0.595501 | 4.1:-9015018 | MS.gene70278:CDS |
| TGTGTACACAGAAGAAGTGC+AGG | 0.600350 | 4.1:-9012762 | MS.gene70278:intron |
| GGAGGAGCAACCGGAAGACA+AGG | 0.602697 | 4.1:-9019008 | MS.gene70278:CDS |
| ACTTCCTCTTGACATGGAGA+CGG | 0.607732 | 4.1:-9014481 | MS.gene70278:CDS |
| TCATCTGTTACAGATCATGT+TGG | 0.607952 | 4.1:-9014174 | MS.gene70278:CDS |
| GAAAGAGAATGTGGAACCTG+AGG | 0.611571 | 4.1:-9017199 | MS.gene70278:CDS |
| TGTACAACTTCCTCTTGACA+TGG | 0.615489 | 4.1:-9014487 | MS.gene70278:CDS |
| GCGAAGATAGGCGGAGCAAG+AGG | 0.616111 | 4.1:-9018895 | MS.gene70278:CDS |
| GAGAGGACTTACCGGAAGCA+CGG | 0.616261 | 4.1:-9018941 | MS.gene70278:CDS |
| GTTCAATCTAATGCTTCCAG+TGG | 0.619478 | 4.1:-9014921 | MS.gene70278:CDS |
| ATGGAGACGGGACACTGCAA+GGG | 0.619950 | 4.1:-9014468 | MS.gene70278:CDS |
| GTACTTGGAGAAGACGGTGG+AGG | 0.620385 | 4.1:-9019026 | MS.gene70278:CDS |
| CGACATAAATATGCAACACC+CGG | 0.623634 | 4.1:+9012930 | None:intergenic |
| ATGTCCGTCTGATCATGGAT+AGG | 0.625620 | 4.1:-9016650 | MS.gene70278:CDS |
| ACAGATGCCGTTAAAAGCAA+CGG | 0.627705 | 4.1:-9017019 | MS.gene70278:intron |
| GCAGACTTTGATGATGATGA+AGG | 0.629623 | 4.1:-9014126 | MS.gene70278:CDS |
| ACATGAGATGGTTTGCACGC+AGG | 0.634613 | 4.1:-9012680 | MS.gene70278:CDS |
| GGAACCGACCCATTCACAGT+TGG | 0.635458 | 4.1:+9013258 | None:intergenic |
| AGTTCCTATCCATGATCAGA+CGG | 0.636518 | 4.1:+9016646 | None:intergenic |
| TGGACAGAAAATTGTATGTG+GGG | 0.636625 | 4.1:-9014869 | MS.gene70278:CDS |
| AGAGTGTTCTAAATACGGCC+GGG | 0.637402 | 4.1:-9012948 | MS.gene70278:CDS |
| ACTGACGCAGGTATAACACC+TGG | 0.648870 | 4.1:+9013201 | None:intergenic |
| TGTCCCGTCTCCATGTCAAG+AGG | 0.648903 | 4.1:+9014477 | None:intergenic |
| AGGCAACCAACCAACCTGGT+AGG | 0.658360 | 4.1:+9017143 | None:intergenic |
| AGGCGGAGCAAGAGGTCACG+CGG | 0.658613 | 4.1:-9018887 | MS.gene70278:CDS |
| AGTCCTCTCGGATTTAATGT+CGG | 0.659142 | 4.1:+9018955 | None:intergenic |
| GACTTTGATGATGATGAAGG+AGG | 0.661760 | 4.1:-9014123 | MS.gene70278:CDS |
| GTACTTGCAGTTTGAAACAG+TGG | 0.665993 | 4.1:-9012733 | MS.gene70278:CDS |
| ATACGAGTACTTGGAGAAGA+CGG | 0.666924 | 4.1:-9019032 | MS.gene70278:CDS |
| GGCGCCGACGACGATCTCGA+CGG | 0.667091 | 4.1:-9018920 | MS.gene70278:CDS |
| GCCGACGACGATCTCGACGG+CGG | 0.668056 | 4.1:-9018917 | MS.gene70278:CDS |
| AGTAGGACCATATGGAGCAG+TGG | 0.670759 | 4.1:-9014889 | MS.gene70278:CDS |
| CTGGTACTGACATTCCCACA+AGG | 0.673381 | 4.1:-9013360 | MS.gene70278:intron |
| ACCCCTGTGGCAGAACCAGT+AGG | 0.679311 | 4.1:-9013156 | MS.gene70278:CDS |
| TGTGCCAACTGTGAATGGGT+CGG | 0.685971 | 4.1:-9013262 | MS.gene70278:CDS |
| TCCTACTGGTTCTGCCACAG+GGG | 0.691418 | 4.1:+9013155 | None:intergenic |
| TCTTCACTTCAACATGACTG+AGG | 0.697877 | 4.1:-9014844 | MS.gene70278:CDS |
| CGAGTACTTGGAGAAGACGG+TGG | 0.704167 | 4.1:-9019029 | MS.gene70278:CDS |
| ACAAGTCATGCCTACCCCTG+TGG | 0.707457 | 4.1:-9013169 | MS.gene70278:CDS |
| GACTGAGGCTAATCTCCGAG+AGG | 0.707679 | 4.1:-9014829 | MS.gene70278:intron |
| TGTAATGGTGAAACCCTCTG+AGG | 0.719486 | 4.1:-9014958 | MS.gene70278:CDS |
| CGGAGCAAGAGGTCACGCGG+CGG | 0.728879 | 4.1:-9018884 | MS.gene70278:CDS |
| TATGTTTGATCCAAGCACCG+AGG | 0.738501 | 4.1:-9013103 | MS.gene70278:intron |
| TGTGTTGGTAGAACTGACGC+AGG | 0.749455 | 4.1:+9013189 | None:intergenic |
| TCACCGACATTAAATCCGAG+AGG | 0.753568 | 4.1:-9018958 | MS.gene70278:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATAATAAAAGTTTAATGTAT+TGG | - | chr4.1:9013018-9013037 | MS.gene70278:intron | 10.0% |
| !! | TACTTAAAATATTAGAAAAT+TGG | - | chr4.1:9017326-9017345 | MS.gene70278:intron | 10.0% |
| !! | AATAAATAAAAGGTTAAAAG+TGG | + | chr4.1:9015686-9015705 | None:intergenic | 15.0% |
| !! | AATATATTTAGTCAAACTAT+AGG | + | chr4.1:9016761-9016780 | None:intergenic | 15.0% |
| !! | AATTATACTTTAAACAAAAG+AGG | + | chr4.1:9014710-9014729 | None:intergenic | 15.0% |
| !! | ATCAACAAAATTTAAACAAA+GGG | + | chr4.1:9017159-9017178 | None:intergenic | 15.0% |
| !! | ATTATACTTTAAACAAAAGA+GGG | + | chr4.1:9014709-9014728 | None:intergenic | 15.0% |
| !! | ATTGTTGAATTTAATAAAGA+GGG | + | chr4.1:9018943-9018962 | None:intergenic | 15.0% |
| !! | CAAATTTACTAAAGTTTATA+CGG | - | chr4.1:9017400-9017419 | MS.gene70278:intron | 15.0% |
| !! | TAAATATAAAATGACCTAAA+AGG | + | chr4.1:9016089-9016108 | None:intergenic | 15.0% |
| !! | TATATGATATTAGAACATTA+TGG | - | chr4.1:9013530-9013549 | MS.gene70278:intron | 15.0% |
| !! | TATCAACAAAATTTAAACAA+AGG | + | chr4.1:9017160-9017179 | None:intergenic | 15.0% |
| !! | TATTATATGAATTAAGAGTA+AGG | + | chr4.1:9015848-9015867 | None:intergenic | 15.0% |
| !!! | AACATTTTATCAAACAAAAT+AGG | + | chr4.1:9017630-9017649 | None:intergenic | 15.0% |
| !!! | CTATTTAAAACAAACAAAAA+TGG | + | chr4.1:9014289-9014308 | None:intergenic | 15.0% |
| !!! | TAAAATTGTTTTCTTTAAAC+TGG | - | chr4.1:9016795-9016814 | MS.gene70278:intron | 15.0% |
| !!! | TTCATTAATTTGTTGTTATT+GGG | - | chr4.1:9013933-9013952 | MS.gene70278:intron | 15.0% |
| !!! | TTGCAATTTTTTAATTAGTT+CGG | - | chr4.1:9018621-9018640 | MS.gene70278:intron | 15.0% |
| !!! | TTTCATTAATTTGTTGTTAT+TGG | - | chr4.1:9013932-9013951 | MS.gene70278:intron | 15.0% |
| !!! | TTTTGTTCTTATAAAATAAG+AGG | - | chr4.1:9013738-9013757 | MS.gene70278:intron | 15.0% |
| !! | AAAAAAATTGCATATAACAC+TGG | + | chr4.1:9013719-9013738 | None:intergenic | 20.0% |
| !! | AAATATTAGAAAATTGGTTG+TGG | - | chr4.1:9017332-9017351 | MS.gene70278:intron | 20.0% |
| !! | AGGTATAAGTATATCATTAA+TGG | - | chr4.1:9013825-9013844 | MS.gene70278:intron | 20.0% |
| !! | AGGTTACATGTAAATATATA+AGG | - | chr4.1:9017603-9017622 | MS.gene70278:CDS | 20.0% |
| !! | ATTAGTATTACGTAGTTATT+GGG | - | chr4.1:9013060-9013079 | MS.gene70278:intron | 20.0% |
| !! | ATTGTATGCATGAAAAAAAT+GGG | + | chr4.1:9015033-9015052 | None:intergenic | 20.0% |
| !! | GATTGTTGAATTTAATAAAG+AGG | + | chr4.1:9018944-9018963 | None:intergenic | 20.0% |
| !! | GGTTACATGTAAATATATAA+GGG | - | chr4.1:9017604-9017623 | MS.gene70278:CDS | 20.0% |
| !! | TATTAGTATTACGTAGTTAT+TGG | - | chr4.1:9013059-9013078 | MS.gene70278:intron | 20.0% |
| !! | TCAACAAAATTTAAACAAAG+GGG | + | chr4.1:9017158-9017177 | None:intergenic | 20.0% |
| !! | TTATACTTTAAACAAAAGAG+GGG | + | chr4.1:9014708-9014727 | None:intergenic | 20.0% |
| !! | TTCTAGATATGAAATTATAC+AGG | - | chr4.1:9017509-9017528 | MS.gene70278:intron | 20.0% |
| !! | TTTATATGAAGCCAAATTTA+AGG | - | chr4.1:9019035-9019054 | MS.gene70278:CDS | 20.0% |
| !! | TTTATGTCTATATCAAAATC+TGG | + | chr4.1:9018423-9018442 | None:intergenic | 20.0% |
| !!! | AAACATTTCTTTTGTTGTTT+CGG | + | chr4.1:9017683-9017702 | None:intergenic | 20.0% |
| !!! | AAAGGTAAAAATATTTTTGC+TGG | - | chr4.1:9017132-9017151 | MS.gene70278:intron | 20.0% |
| !!! | AACAACAAAAGAAATGTTTT+TGG | - | chr4.1:9017684-9017703 | MS.gene70278:intron | 20.0% |
| !!! | AGATTGAACAAGATTTTTTT+CGG | + | chr4.1:9016474-9016493 | None:intergenic | 20.0% |
| !!! | TTTAAAACAAACAAAAATGG+AGG | + | chr4.1:9014286-9014305 | None:intergenic | 20.0% |
| !!! | TTTTGATATAGACATAAAAG+AGG | - | chr4.1:9018425-9018444 | MS.gene70278:intron | 20.0% |
| ! | AAATTGCAACACATAATATG+TGG | + | chr4.1:9018610-9018629 | None:intergenic | 25.0% |
| ! | AACAATAGTACTCATCTATT+GGG | - | chr4.1:9017898-9017917 | MS.gene70278:intron | 25.0% |
| ! | AACATGAAAAGGATAATATG+TGG | + | chr4.1:9018579-9018598 | None:intergenic | 25.0% |
| ! | AAGATATTGATCTAGAGAAA+AGG | + | chr4.1:9018986-9019005 | None:intergenic | 25.0% |
| ! | AATATGTGAAAACAATGAAC+AGG | + | chr4.1:9018106-9018125 | None:intergenic | 25.0% |
| ! | ATCTCTAGATCATTCTTAAT+CGG | + | chr4.1:9013487-9013506 | None:intergenic | 25.0% |
| ! | ATTTCTAATTCAATCATGTC+TGG | + | chr4.1:9013168-9013187 | None:intergenic | 25.0% |
| ! | CACATATATATATACACACA+CGG | + | chr4.1:9016689-9016708 | None:intergenic | 25.0% |
| ! | CAGGTTCATAAAAATATAAG+AGG | + | chr4.1:9018087-9018106 | None:intergenic | 25.0% |
| ! | CATTGTATGCATGAAAAAAA+TGG | + | chr4.1:9015034-9015053 | None:intergenic | 25.0% |
| ! | GACTTACAATTCATAAAAGA+AGG | + | chr4.1:9015125-9015144 | None:intergenic | 25.0% |
| ! | GCAATATTTCTTAAGGTTAA+AGG | + | chr4.1:9016992-9017011 | None:intergenic | 25.0% |
| ! | GTGAAAAGCAATATTTCTTA+AGG | + | chr4.1:9016999-9017018 | None:intergenic | 25.0% |
| ! | TAACAATAGTACTCATCTAT+TGG | - | chr4.1:9017897-9017916 | MS.gene70278:intron | 25.0% |
| ! | TATCACAACAAGATTCTAAT+CGG | + | chr4.1:9016831-9016850 | None:intergenic | 25.0% |
| ! | TATTTCTTAAGGTTAAAGGT+TGG | + | chr4.1:9016988-9017007 | None:intergenic | 25.0% |
| ! | TCATAAAAGAAGGAAAAGAT+GGG | + | chr4.1:9015115-9015134 | None:intergenic | 25.0% |
| ! | TTCATAAAAGAAGGAAAAGA+TGG | + | chr4.1:9015116-9015135 | None:intergenic | 25.0% |
| ! | TTGAATTTAATAAAGAGGGA+CGG | + | chr4.1:9018939-9018958 | None:intergenic | 25.0% |
| ! | TTGATTGCATATATTTGTAG+AGG | + | chr4.1:9017715-9017734 | None:intergenic | 25.0% |
| !! | AATTTGGCTTCATATAAATG+TGG | + | chr4.1:9019033-9019052 | None:intergenic | 25.0% |
| !! | AGAAATGAACGTATTGTTTT+TGG | - | chr4.1:9017774-9017793 | MS.gene70278:intron | 25.0% |
| !! | ATTGTTTTCTTTAAACTGGT+AGG | - | chr4.1:9016799-9016818 | MS.gene70278:intron | 25.0% |
| !! | TAAAATTTTGCTAATGCACT+AGG | + | chr4.1:9015233-9015252 | None:intergenic | 25.0% |
| !! | TAAACTTGCTTCACTATTTA+TGG | + | chr4.1:9015892-9015911 | None:intergenic | 25.0% |
| !! | TTAAACAAACATGTCCTTTT+AGG | - | chr4.1:9016072-9016091 | MS.gene70278:intron | 25.0% |
| !! | TTTATGAAGTTTTTCTGTGT+TGG | - | chr4.1:9013660-9013679 | MS.gene70278:intron | 25.0% |
| !!! | ACATTAGTTTTTCTTCTGTA+CGG | - | chr4.1:9017948-9017967 | MS.gene70278:intron | 25.0% |
| !!! | GAAATGAACGTATTGTTTTT+GGG | - | chr4.1:9017775-9017794 | MS.gene70278:intron | 25.0% |
| !!! | TCACTTTAACTTGTATTCAT+TGG | - | chr4.1:9017034-9017053 | MS.gene70278:intron | 25.0% |
| !!! | TGCTCTATTGATTTTTCAAT+TGG | - | chr4.1:9012953-9012972 | MS.gene70278:CDS | 25.0% |
| !!! | TTTTAGATTTTTGAGCCATT+TGG | - | chr4.1:9016884-9016903 | MS.gene70278:intron | 25.0% |
| AAAAAACAAAGCCAACAGAA+AGG | + | chr4.1:9017869-9017888 | None:intergenic | 30.0% | |
| AAAAACAAAGCCAACAGAAA+GGG | + | chr4.1:9017868-9017887 | None:intergenic | 30.0% | |
| AACACATCAGAATGATAATC+TGG | + | chr4.1:9018914-9018933 | None:intergenic | 30.0% | |
| AAGCTGAGTTTCATTATGTA+AGG | + | chr4.1:9015459-9015478 | None:intergenic | 30.0% | |
| AATATTCTTGAGTTCTCTGT+TGG | - | chr4.1:9018780-9018799 | MS.gene70278:intron | 30.0% | |
| AATCAATTCATCACAAACCT+CGG | + | chr4.1:9018323-9018342 | None:intergenic | 30.0% | |
| AATGCCTATTGTAGAAAAGA+TGG | - | chr4.1:9013212-9013231 | MS.gene70278:CDS | 30.0% | |
| ACAATAGTACTCATCTATTG+GGG | - | chr4.1:9017899-9017918 | MS.gene70278:intron | 30.0% | |
| ACCAAACAGCAACTAATTAA+TGG | + | chr4.1:9013794-9013813 | None:intergenic | 30.0% | |
| ACTCTGCTTTCAGTTAAATA+GGG | - | chr4.1:9014534-9014553 | MS.gene70278:intron | 30.0% | |
| AGAGCAAACATGAAATGAAA+AGG | + | chr4.1:9012939-9012958 | None:intergenic | 30.0% | |
| AGAGTAAAATAAGAGATGCA+GGG | - | chr4.1:9013114-9013133 | MS.gene70278:CDS | 30.0% | |
| AGTGTTCATGTTTGATAGAT+AGG | - | chr4.1:9017543-9017562 | MS.gene70278:intron | 30.0% | |
| ATGACAATATTAGAGAGAGT+TGG | - | chr4.1:9013186-9013205 | MS.gene70278:CDS | 30.0% | |
| CAAATTCAACTAGTATGACA+TGG | - | chr4.1:9014121-9014140 | MS.gene70278:CDS | 30.0% | |
| CATAAAAGAAGGAAAAGATG+GGG | + | chr4.1:9015114-9015133 | None:intergenic | 30.0% | |
| CATGTCATACTAGTTGAATT+TGG | + | chr4.1:9014123-9014142 | None:intergenic | 30.0% | |
| GATCTTGGAAAGAAAAACTA+AGG | + | chr4.1:9017816-9017835 | None:intergenic | 30.0% | |
| GCATTCAGCAATAGTATATA+TGG | - | chr4.1:9015791-9015810 | MS.gene70278:intron | 30.0% | |
| GTAGTGTGATTAATCATACA+TGG | + | chr4.1:9018885-9018904 | None:intergenic | 30.0% | |
| GTGAGTATGTTAATTGTTCT+GGG | + | chr4.1:9013385-9013404 | None:intergenic | 30.0% | |
| TCAAGATTCGTCCTTAAATT+TGG | + | chr4.1:9019049-9019068 | None:intergenic | 30.0% | |
| TCAGAGTTTAAATGGGAAAT+TGG | - | chr4.1:9017090-9017109 | MS.gene70278:intron | 30.0% | |
| TGACAATATTAGAGAGAGTT+GGG | - | chr4.1:9013187-9013206 | MS.gene70278:CDS | 30.0% | |
| TGATCTAGAGATTAATGAGT+TGG | - | chr4.1:9013495-9013514 | MS.gene70278:intron | 30.0% | |
| TGCATGAAAAAAATGGGAAT+AGG | + | chr4.1:9015027-9015046 | None:intergenic | 30.0% | |
| TGCTTGACTGTATTCTTAAT+TGG | - | chr4.1:9014890-9014909 | MS.gene70278:CDS | 30.0% | |
| TGGAAACTGATAACATGAAA+AGG | + | chr4.1:9018559-9018578 | None:intergenic | 30.0% | |
| TGTGAGTATGTTAATTGTTC+TGG | + | chr4.1:9013386-9013405 | None:intergenic | 30.0% | |
| TTCAATAATAAACACTCGCT+GGG | + | chr4.1:9018280-9018299 | None:intergenic | 30.0% | |
| TTGAAATGTGATGCTAAACT+AGG | - | chr4.1:9013761-9013780 | MS.gene70278:intron | 30.0% | |
| ! | ACAAAAAAGAGTATGTCTGA+TGG | - | chr4.1:9013420-9013439 | MS.gene70278:intron | 30.0% |
| ! | AGAGATTAATGAGTTGGATA+GGG | - | chr4.1:9013501-9013520 | MS.gene70278:intron | 30.0% |
| ! | AGTGAGCTAATTAAAGCATT+AGG | + | chr4.1:9014959-9014978 | None:intergenic | 30.0% |
| ! | ATTTATACGGTCTGAGATAT+TGG | - | chr4.1:9014314-9014333 | MS.gene70278:CDS | 30.0% |
| ! | ATTTGATGTTCCATGTTTTC+AGG | - | chr4.1:9014727-9014746 | MS.gene70278:intron | 30.0% |
| ! | GTGAGCTAATTAAAGCATTA+GGG | + | chr4.1:9014958-9014977 | None:intergenic | 30.0% |
| ! | TAGAGATTAATGAGTTGGAT+AGG | - | chr4.1:9013500-9013519 | MS.gene70278:intron | 30.0% |
| ! | TCGTTATCTGAAACATCATA+TGG | + | chr4.1:9018364-9018383 | None:intergenic | 30.0% |
| ! | TCTACCATCTTTTCTACAAT+AGG | + | chr4.1:9013219-9013238 | None:intergenic | 30.0% |
| ! | TCTGAAACATCATATGGTTA+TGG | + | chr4.1:9018358-9018377 | None:intergenic | 30.0% |
| !! | TAATCTGGGTTGATCTAAAA+AGG | - | chr4.1:9013901-9013920 | MS.gene70278:intron | 30.0% |
| !!! | AGCTTATAAGCTTGTTTTGA+TGG | - | chr4.1:9015559-9015578 | MS.gene70278:intron | 30.0% |
| AAAACAAAGCCAACAGAAAG+GGG | + | chr4.1:9017867-9017886 | None:intergenic | 35.0% | |
| AAAATATCGTACAGACCTTG+TGG | + | chr4.1:9018064-9018083 | None:intergenic | 35.0% | |
| AAATATCGTACAGACCTTGT+GGG | + | chr4.1:9018063-9018082 | None:intergenic | 35.0% | |
| AAATGGGAATAGGACTGAAA+AGG | + | chr4.1:9015017-9015036 | None:intergenic | 35.0% | |
| AACAACAACCAATCCTAAGT+AGG | + | chr4.1:9013580-9013599 | None:intergenic | 35.0% | |
| ACAACAACCAATCCTAAGTA+GGG | + | chr4.1:9013579-9013598 | None:intergenic | 35.0% | |
| ACACTGGCAACATAAACAAT+AGG | + | chr4.1:9013703-9013722 | None:intergenic | 35.0% | |
| ACCATTTAGACAAGAAGGAT+TGG | + | chr4.1:9015327-9015346 | None:intergenic | 35.0% | |
| ACTTTCATTTGACCAGTAGT+GGG | - | chr4.1:9015193-9015212 | MS.gene70278:intron | 35.0% | |
| AGAATACAGCAAAGAGATGT+AGG | + | chr4.1:9016284-9016303 | None:intergenic | 35.0% | |
| AGACATAAAAGAGGATGTAG+AGG | - | chr4.1:9018434-9018453 | MS.gene70278:intron | 35.0% | |
| AGCATTGCTTATGCAAAGAT+TGG | - | chr4.1:9018023-9018042 | MS.gene70278:intron | 35.0% | |
| AGGTTTGATGCTCATGAATT+TGG | - | chr4.1:9015161-9015180 | MS.gene70278:intron | 35.0% | |
| AGTGGACAGAAAATTGTATG+TGG | - | chr4.1:9016535-9016554 | MS.gene70278:intron | 35.0% | |
| ATAAGGAAAGGGAAAAGGAA+CGG | - | chr4.1:9012751-9012770 | MS.gene70278:CDS | 35.0% | |
| ATGATTTCCTGTTTGCTCTT+TGG | - | chr4.1:9014359-9014378 | MS.gene70278:intron | 35.0% | |
| CACTCTGCTTTCAGTTAAAT+AGG | - | chr4.1:9014533-9014552 | MS.gene70278:intron | 35.0% | |
| CACTGGCAACATAAACAATA+GGG | + | chr4.1:9013702-9013721 | None:intergenic | 35.0% | |
| CTGCAAGTCAAGTTAAAATG+AGG | + | chr4.1:9014172-9014191 | None:intergenic | 35.0% | |
| CTTCAATAATAAACACTCGC+TGG | + | chr4.1:9018281-9018300 | None:intergenic | 35.0% | |
| GAATACAGCAAAGAGATGTA+GGG | + | chr4.1:9016283-9016302 | None:intergenic | 35.0% | |
| GACAATATTAGAGAGAGTTG+GGG | - | chr4.1:9013188-9013207 | MS.gene70278:CDS | 35.0% | |
| GAGAGTAAAATAAGAGATGC+AGG | - | chr4.1:9013113-9013132 | MS.gene70278:CDS | 35.0% | |
| GATAAAATTAGCTGCTGAAG+TGG | + | chr4.1:9016116-9016135 | None:intergenic | 35.0% | |
| GTATTACGTAGTTATTGGGA+TGG | - | chr4.1:9013064-9013083 | MS.gene70278:intron | 35.0% | |
| GTCCATATTAGAGTCCAAAT+TGG | + | chr4.1:9014057-9014076 | None:intergenic | 35.0% | |
| GTGGACAGAAAATTGTATGT+GGG | - | chr4.1:9016536-9016555 | MS.gene70278:intron | 35.0% | |
| TCATCTGTTACAGATCATGT+TGG | - | chr4.1:9017232-9017251 | MS.gene70278:intron | 35.0% | |
| TGAGCGGTTATATTAGAAAG+TGG | + | chr4.1:9015740-9015759 | None:intergenic | 35.0% | |
| TGGACAGAAAATTGTATGTG+GGG | - | chr4.1:9016537-9016556 | MS.gene70278:intron | 35.0% | |
| TTCGTATGAGTACAGAGATA+CGG | + | chr4.1:9015351-9015370 | None:intergenic | 35.0% | |
| TTGATGGAATGTGATGTGTT+TGG | - | chr4.1:9015575-9015594 | MS.gene70278:intron | 35.0% | |
| ! | AAAAGCTAGCTTATAGCTGA+TGG | + | chr4.1:9016201-9016220 | None:intergenic | 35.0% |
| ! | AAAGCTAGCTTATAGCTGAT+GGG | + | chr4.1:9016200-9016219 | None:intergenic | 35.0% |
| ! | AAAGCTAGCTTATAGCTTGT+TGG | - | chr4.1:9015533-9015552 | MS.gene70278:intron | 35.0% |
| ! | AGTTTTTCTGTGTTGGAATG+TGG | - | chr4.1:9013667-9013686 | MS.gene70278:intron | 35.0% |
| ! | ATGAGAATTTTGTGGATGTG+TGG | - | chr4.1:9013137-9013156 | MS.gene70278:CDS | 35.0% |
| ! | CAGAATGATAATCTGGTTCA+TGG | + | chr4.1:9018907-9018926 | None:intergenic | 35.0% |
| ! | CTGTTTGGTTCAATTCTTCA+AGG | - | chr4.1:9013805-9013824 | MS.gene70278:intron | 35.0% |
| ! | GATGTCAGTGTTCTTCTTTT+TGG | + | chr4.1:9012430-9012449 | None:intergenic | 35.0% |
| ! | GCCATTAATTAGTTGCTGTT+TGG | - | chr4.1:9013790-9013809 | MS.gene70278:intron | 35.0% |
| ! | TATGATCCTTACTGCAGTTT+TGG | - | chr4.1:9013981-9014000 | MS.gene70278:intron | 35.0% |
| ! | TTGAAATTTCAGTGCTGTTG+AGG | - | chr4.1:9017570-9017589 | MS.gene70278:intron | 35.0% |
| !! | CTAGAGTTTTTGTTTCCCTA+CGG | - | chr4.1:9015491-9015510 | MS.gene70278:intron | 35.0% |
| !! | GAGGAAGAGTGTTCTAAATA+CGG | - | chr4.1:9018453-9018472 | MS.gene70278:intron | 35.0% |
| !! | GGGAAGTTATTGTTTGTTGT+TGG | - | chr4.1:9017919-9017938 | MS.gene70278:intron | 35.0% |
| !!! | ACGTGAGCAGTTTTTTTAAG+AGG | + | chr4.1:9015767-9015786 | None:intergenic | 35.0% |
| !!! | CTCATTTTAACTTGACTTGC+AGG | - | chr4.1:9014170-9014189 | MS.gene70278:CDS | 35.0% |
| !!! | TTTTTTAAGAGGAACGTGAG+CGG | + | chr4.1:9015756-9015775 | None:intergenic | 35.0% |
| AAAAGAAGGAAAAGATGGGG+TGG | + | chr4.1:9015111-9015130 | None:intergenic | 40.0% | |
| AAACACGCACAAATACCTCT+CGG | + | chr4.1:9016595-9016614 | None:intergenic | 40.0% | |
| AAAGAGATGTAGGGTGTGTT+TGG | + | chr4.1:9016274-9016293 | None:intergenic | 40.0% | |
| AACCTGAATTTGACGAACGT+CGG | + | chr4.1:9017212-9017231 | None:intergenic | 40.0% | |
| AAGAAGAGTAGATCAGATGC+AGG | - | chr4.1:9013297-9013316 | MS.gene70278:intron | 40.0% | |
| AAGAGATAAGGAGAGAGAGA+AGG | - | chr4.1:9012779-9012798 | MS.gene70278:intron | 40.0% | |
| AAGGCAGCTCAGAGTTTAAA+TGG | - | chr4.1:9017082-9017101 | MS.gene70278:intron | 40.0% | |
| AAGGTTTGCAGCATAACATC+AGG | + | chr4.1:9018967-9018986 | None:intergenic | 40.0% | |
| AATGGGAAATTGGAGATTGC+TGG | - | chr4.1:9017100-9017119 | MS.gene70278:intron | 40.0% | |
| ACAACCTCAATCTGACCAAA+TGG | + | chr4.1:9016902-9016921 | None:intergenic | 40.0% | |
| ACAGATGCCGTTAAAAGCAA+CGG | - | chr4.1:9014387-9014406 | MS.gene70278:intron | 40.0% | |
| ACATCTCTCACCTGAAAACA+TGG | + | chr4.1:9014740-9014759 | None:intergenic | 40.0% | |
| ACATGAAAAGGACACAGCAA+AGG | + | chr4.1:9018547-9018566 | None:intergenic | 40.0% | |
| ACGGAACCATTTAGACAAGA+AGG | + | chr4.1:9015332-9015351 | None:intergenic | 40.0% | |
| AGAAGAGTAGATCAGATGCA+GGG | - | chr4.1:9013298-9013317 | MS.gene70278:intron | 40.0% | |
| AGATGGTAGAAACTCAGCTT+AGG | - | chr4.1:9013229-9013248 | MS.gene70278:CDS | 40.0% | |
| AGGAACTCAAGACGATCTAA+AGG | - | chr4.1:9014776-9014795 | MS.gene70278:intron | 40.0% | |
| AGGCAGCTCAGAGTTTAAAT+GGG | - | chr4.1:9017083-9017102 | MS.gene70278:intron | 40.0% | |
| AGGTAGTAGAGAGAAAGAGA+GGG | - | chr4.1:9012656-9012675 | MS.gene70278:intron | 40.0% | |
| AGGTTTGCAGCATAACATCA+GGG | + | chr4.1:9018966-9018985 | None:intergenic | 40.0% | |
| AGTCAAATCACTAGAGGCAA+GGG | - | chr4.1:9013448-9013467 | MS.gene70278:intron | 40.0% | |
| AGTCCTCTCGGATTTAATGT+CGG | + | chr4.1:9012454-9012473 | None:intergenic | 40.0% | |
| AGTGCGGTGATAAAAGATCT+TGG | + | chr4.1:9017831-9017850 | None:intergenic | 40.0% | |
| AGTTCCTATCCATGATCAGA+CGG | + | chr4.1:9014763-9014782 | None:intergenic | 40.0% | |
| ATAACACCTGGATTGCCAAA+AGG | + | chr4.1:9018196-9018215 | None:intergenic | 40.0% | |
| ATAAGGAGAGAGAGAAGGAA+CGG | - | chr4.1:9012784-9012803 | MS.gene70278:intron | 40.0% | |
| ATACGAGTACTTGGAGAAGA+CGG | - | chr4.1:9012374-9012393 | MS.gene70278:CDS | 40.0% | |
| ATATTTCCCAACTGCAGCAT+TGG | - | chr4.1:9018121-9018140 | MS.gene70278:intron | 40.0% | |
| ATGCAAGTTCTTTATGCTGC+AGG | - | chr4.1:9016351-9016370 | MS.gene70278:intron | 40.0% | |
| ATGTGTGTGTGTGTTAACTG+AGG | - | chr4.1:9016704-9016723 | MS.gene70278:intron | 40.0% | |
| ATTGGGTTTCAATGCTAGCA+CGG | - | chr4.1:9013950-9013969 | MS.gene70278:intron | 40.0% | |
| ATTTCGAAAACAGAGATGGC+AGG | - | chr4.1:9012883-9012902 | MS.gene70278:intron | 40.0% | |
| CAAGACGATCTAAAGGAGTT+GGG | - | chr4.1:9014783-9014802 | MS.gene70278:intron | 40.0% | |
| CAGAGTTCGAATCTTGGTTA+GGG | - | chr4.1:9013348-9013367 | MS.gene70278:intron | 40.0% | |
| CAGGGATAAGAAAGAGAATG+TGG | - | chr4.1:9014198-9014217 | MS.gene70278:intron | 40.0% | |
| CATAAGCAATGCTCTTGAGT+GGG | + | chr4.1:9018016-9018035 | None:intergenic | 40.0% | |
| CGACATAAATATGCAACACC+CGG | + | chr4.1:9018479-9018498 | None:intergenic | 40.0% | |
| CGAGATTTCGAAAACAGAGA+TGG | - | chr4.1:9012879-9012898 | MS.gene70278:intron | 40.0% | |
| CGCCAATTTGGACTCTAATA+TGG | - | chr4.1:9014052-9014071 | MS.gene70278:intron | 40.0% | |
| GAACGTCGGTAACAAACAAA+TGG | + | chr4.1:9017198-9017217 | None:intergenic | 40.0% | |
| GAAGATCGATGACATAGTCT+TGG | - | chr4.1:9014988-9015007 | MS.gene70278:CDS | 40.0% | |
| GAATTGTAAGTCTCTCACGT+TGG | - | chr4.1:9015133-9015152 | MS.gene70278:intron | 40.0% | |
| GACTTTCATTTGACCAGTAG+TGG | - | chr4.1:9015192-9015211 | MS.gene70278:intron | 40.0% | |
| GAGAGATAAGGAAAGGGAAA+AGG | - | chr4.1:9012746-9012765 | MS.gene70278:CDS | 40.0% | |
| GAGAGTAGTCAAATCACTAG+AGG | - | chr4.1:9013442-9013461 | MS.gene70278:intron | 40.0% | |
| GCCAATCCTTCTTGTCTAAA+TGG | - | chr4.1:9015323-9015342 | MS.gene70278:intron | 40.0% | |
| GGAAAGAAAAACTAAGGACC+CGG | + | chr4.1:9017810-9017829 | None:intergenic | 40.0% | |
| GTTCAATCTAATGCTTCCAG+TGG | - | chr4.1:9016485-9016504 | MS.gene70278:intron | 40.0% | |
| GTTGATCACAGCTATCTTCA+TGG | - | chr4.1:9018748-9018767 | MS.gene70278:intron | 40.0% | |
| TAAGGAAAGGGAAAAGGAAC+GGG | - | chr4.1:9012752-9012771 | MS.gene70278:CDS | 40.0% | |
| TACAGATCATGTTGGAAGTC+AGG | - | chr4.1:9017240-9017259 | MS.gene70278:intron | 40.0% | |
| TAGATCAACCCAGATTATCC+TGG | + | chr4.1:9013898-9013917 | None:intergenic | 40.0% | |
| TAGTCAAATCACTAGAGGCA+AGG | - | chr4.1:9013447-9013466 | MS.gene70278:intron | 40.0% | |
| TAGTTATTGGGATGGAGTGT+TGG | - | chr4.1:9013072-9013091 | MS.gene70278:intron | 40.0% | |
| TATGAGTTCTTCTCGAAAGC+TGG | - | chr4.1:9014421-9014440 | MS.gene70278:intron | 40.0% | |
| TCAAGACGATCTAAAGGAGT+TGG | - | chr4.1:9014782-9014801 | MS.gene70278:intron | 40.0% | |
| TCTTCACTTCAACATGACTG+AGG | - | chr4.1:9016562-9016581 | MS.gene70278:intron | 40.0% | |
| TGCCACGTTCCTACAAATAA+GGG | - | chr4.1:9014632-9014651 | MS.gene70278:intron | 40.0% | |
| TGCCTTTGCATGTTCAAGAT+GGG | + | chr4.1:9017068-9017087 | None:intergenic | 40.0% | |
| TGTACAACTTCCTCTTGACA+TGG | - | chr4.1:9016919-9016938 | MS.gene70278:intron | 40.0% | |
| TGTGTGTGTGTGTTAACTGA+GGG | - | chr4.1:9016705-9016724 | MS.gene70278:intron | 40.0% | |
| TGTTAGAAACCTGAACGACA+GGG | - | chr4.1:9017439-9017458 | MS.gene70278:intron | 40.0% | |
| TTAAATCCGAGAGGACTTAC+CGG | - | chr4.1:9012457-9012476 | MS.gene70278:intron | 40.0% | |
| TTGCCACGTTCCTACAAATA+AGG | - | chr4.1:9014631-9014650 | MS.gene70278:intron | 40.0% | |
| TTGCTTATGCAAAGATTGGC+TGG | - | chr4.1:9018027-9018046 | MS.gene70278:intron | 40.0% | |
| TTGGATGAATCCTTGTCTTC+CGG | + | chr4.1:9012411-9012430 | None:intergenic | 40.0% | |
| TTGTTAGAAACCTGAACGAC+AGG | - | chr4.1:9017438-9017457 | MS.gene70278:intron | 40.0% | |
| ! | ACATTTTTGCAACGGATGCA+AGG | - | chr4.1:9015293-9015312 | MS.gene70278:intron | 40.0% |
| ! | ATGCAGGGATGAGAATTTTG+TGG | - | chr4.1:9013129-9013148 | MS.gene70278:CDS | 40.0% |
| ! | GTACTTGCAGTTTGAAACAG+TGG | - | chr4.1:9018673-9018692 | MS.gene70278:intron | 40.0% |
| ! | TGATGATGATGAAGGAGGAT+TGG | - | chr4.1:9017288-9017307 | MS.gene70278:intron | 40.0% |
| !! | AAGAGTGTTCTAAATACGGC+CGG | - | chr4.1:9018457-9018476 | MS.gene70278:intron | 40.0% |
| !! | AGGGGAAGTATCATGTATAG+AGG | + | chr4.1:9014690-9014709 | None:intergenic | 40.0% |
| !! | GACTTTGATGATGATGAAGG+AGG | - | chr4.1:9017283-9017302 | MS.gene70278:intron | 40.0% |
| !! | GCAGACTTTGATGATGATGA+AGG | - | chr4.1:9017280-9017299 | MS.gene70278:intron | 40.0% |
| !! | GGCTGCTACTTTATTGTGTA+TGG | - | chr4.1:9014555-9014574 | MS.gene70278:intron | 40.0% |
| !!! | AAGATTTTTTTCGGCCTCAG+AGG | + | chr4.1:9016465-9016484 | None:intergenic | 40.0% |
| !!! | AGATTTTTTTCGGCCTCAGA+GGG | + | chr4.1:9016464-9016483 | None:intergenic | 40.0% |
| !!! | TCTCTCTCCGTTGCTTTTAA+CGG | + | chr4.1:9014397-9014416 | None:intergenic | 40.0% |
| !!! | TGCAGTTTTGGCTCATGTAT+AGG | - | chr4.1:9013993-9014012 | MS.gene70278:intron | 40.0% |
| AACGAGCAATGCACATGAGA+TGG | - | chr4.1:9018714-9018733 | MS.gene70278:intron | 45.0% | |
| AAGAGGAGAAAGAGAGACCA+AGG | - | chr4.1:9012820-9012839 | MS.gene70278:intron | 45.0% | |
| AAGATCGTTCACGGTGTTCA+CGG | + | chr4.1:9012605-9012624 | None:intergenic | 45.0% | |
| ACAGTTCTCTGATCCCTTTC+TGG | + | chr4.1:9014238-9014257 | None:intergenic | 45.0% | |
| ACTTCCTCTTGACATGGAGA+CGG | - | chr4.1:9016925-9016944 | MS.gene70278:intron | 45.0% | |
| AGAAAAACTAAGGACCCGGT+TGG | + | chr4.1:9017806-9017825 | None:intergenic | 45.0% | |
| AGGCAGATGTAAGCATTCAC+TGG | + | chr4.1:9014670-9014689 | None:intergenic | 45.0% | |
| ATAGGGAGAGAGAAAAGGAG+AGG | - | chr4.1:9012718-9012737 | MS.gene70278:CDS | 45.0% | |
| ATGCTAAAAGCCTGCTGAAC+AGG | + | chr4.1:9018172-9018191 | None:intergenic | 45.0% | |
| ATGTCCGTCTGATCATGGAT+AGG | - | chr4.1:9014756-9014775 | MS.gene70278:intron | 45.0% | |
| ATTATCCTGGTATCCCTGGT+CGG | + | chr4.1:9013885-9013904 | None:intergenic | 45.0% | |
| ATTGGTGTGCCAACTGTGAA+TGG | - | chr4.1:9018139-9018158 | MS.gene70278:intron | 45.0% | |
| CAACCAATCCTAAGTAGGGT+TGG | + | chr4.1:9013575-9013594 | None:intergenic | 45.0% | |
| CAGGGATACCAGGATAATCT+GGG | - | chr4.1:9013887-9013906 | MS.gene70278:intron | 45.0% | |
| CAGTTCTCTGATCCCTTTCT+GGG | + | chr4.1:9014237-9014256 | None:intergenic | 45.0% | |
| CATGAGCCAAAACTGCAGTA+AGG | + | chr4.1:9013990-9014009 | None:intergenic | 45.0% | |
| CATGCCATAGTGATGAGGAA+TGG | - | chr4.1:9014919-9014938 | MS.gene70278:CDS | 45.0% | |
| CATTCCTCATCACTATGGCA+TGG | + | chr4.1:9014921-9014940 | None:intergenic | 45.0% | |
| CCACGTTCCTACAAATAAGG+GGG | - | chr4.1:9014634-9014653 | MS.gene70278:intron | 45.0% | |
| CCAGAGTTCGAATCTTGGTT+AGG | - | chr4.1:9013347-9013366 | MS.gene70278:intron | 45.0% | |
| CCATATAGCCAACCCTACTT+AGG | - | chr4.1:9013564-9013583 | MS.gene70278:intron | 45.0% | |
| CCTAACCAAGATTCGAACTC+TGG | + | chr4.1:9013350-9013369 | None:intergenic | 45.0% | |
| CTCACCATTCCTCATCACTA+TGG | + | chr4.1:9014926-9014945 | None:intergenic | 45.0% | |
| CTGCCTTTGCATGTTCAAGA+TGG | + | chr4.1:9017069-9017088 | None:intergenic | 45.0% | |
| CTTCGACGAATACGAGTACT+TGG | - | chr4.1:9012365-9012384 | MS.gene70278:CDS | 45.0% | |
| GAAACTCAGCTTAGGTGGTT+CGG | - | chr4.1:9013237-9013256 | MS.gene70278:CDS | 45.0% | |
| GAAAGAGAATGTGGAACCTG+AGG | - | chr4.1:9014207-9014226 | MS.gene70278:intron | 45.0% | |
| GAGAGATAAGGAGAGGGATA+GGG | - | chr4.1:9012701-9012720 | MS.gene70278:CDS | 45.0% | |
| GAGGTAGTAGAGAGAAAGAG+AGG | - | chr4.1:9012655-9012674 | MS.gene70278:intron | 45.0% | |
| GATTGCTGGCAGGACTATAA+AGG | - | chr4.1:9017114-9017133 | MS.gene70278:intron | 45.0% | |
| GCATAAGCAATGCTCTTGAG+TGG | + | chr4.1:9018017-9018036 | None:intergenic | 45.0% | |
| GCCACGTTCCTACAAATAAG+GGG | - | chr4.1:9014633-9014652 | MS.gene70278:intron | 45.0% | |
| GCTGTTGAGGATTTGCACTT+AGG | - | chr4.1:9017583-9017602 | MS.gene70278:intron | 45.0% | |
| GGAGAGGAGAGATAAGGAAA+GGG | - | chr4.1:9012740-9012759 | MS.gene70278:CDS | 45.0% | |
| GGCAGATGTAAGCATTCACT+GGG | + | chr4.1:9014669-9014688 | None:intergenic | 45.0% | |
| GTGAACACCAAAGAGCAAAC+AGG | + | chr4.1:9014369-9014388 | None:intergenic | 45.0% | |
| TAAGGAGAGAGAGAAGGAAC+GGG | - | chr4.1:9012785-9012804 | MS.gene70278:intron | 45.0% | |
| TAATGCACTAGGCAGTAGGA+TGG | + | chr4.1:9015222-9015241 | None:intergenic | 45.0% | |
| TACCGACGTTCGTCAAATTC+AGG | - | chr4.1:9017207-9017226 | MS.gene70278:CDS | 45.0% | |
| TAGAGAGAAAGAGAGGGAGA+AGG | - | chr4.1:9012662-9012681 | MS.gene70278:CDS | 45.0% | |
| TAGCCAACCCTACTTAGGAT+TGG | - | chr4.1:9013569-9013588 | MS.gene70278:intron | 45.0% | |
| TAGGGAGAGAGAAAAGGAGA+GGG | - | chr4.1:9012719-9012738 | MS.gene70278:CDS | 45.0% | |
| TCACCGACATTAAATCCGAG+AGG | - | chr4.1:9012448-9012467 | MS.gene70278:intron | 45.0% | |
| TCAGAGGGTTTCACCATTAC+AGG | + | chr4.1:9016449-9016468 | None:intergenic | 45.0% | |
| TGAGCCATTTGGTCAGATTG+AGG | - | chr4.1:9016895-9016914 | MS.gene70278:intron | 45.0% | |
| TGCCCATCTTGAACATGCAA+AGG | - | chr4.1:9017063-9017082 | MS.gene70278:intron | 45.0% | |
| TGCTCTTGAGTGGGCATTTA+AGG | + | chr4.1:9018007-9018026 | None:intergenic | 45.0% | |
| TGGTAGAAACTCAGCTTAGG+TGG | - | chr4.1:9013232-9013251 | MS.gene70278:CDS | 45.0% | |
| TGTAATGGTGAAACCCTCTG+AGG | - | chr4.1:9016448-9016467 | MS.gene70278:intron | 45.0% | |
| TGTTACCAAACACAGCCGTA+GGG | + | chr4.1:9015509-9015528 | None:intergenic | 45.0% | |
| TTAGCCATGCCATAGTGATG+AGG | - | chr4.1:9014914-9014933 | MS.gene70278:CDS | 45.0% | |
| TTGCTAATGCACTAGGCAGT+AGG | + | chr4.1:9015226-9015245 | None:intergenic | 45.0% | |
| TTGGTGTGCCAACTGTGAAT+GGG | - | chr4.1:9018140-9018159 | MS.gene70278:intron | 45.0% | |
| TTTCTGTCCACTGCTCCATA+TGG | + | chr4.1:9016527-9016546 | None:intergenic | 45.0% | |
| ! | AGAGTGTTCTAAATACGGCC+GGG | - | chr4.1:9018458-9018477 | MS.gene70278:intron | 45.0% |
| ! | AGCTTATAGCTGATGGGTGA+TGG | + | chr4.1:9016194-9016213 | None:intergenic | 45.0% |
| ! | CAGGCTTTTAGCATGCCTTT+TGG | - | chr4.1:9018178-9018197 | MS.gene70278:intron | 45.0% |
| ! | CTCTAAGAAGGATCGCGATA+GGG | - | chr4.1:9012560-9012579 | MS.gene70278:intron | 45.0% |
| ! | GCACGCACACATTTTTGCAA+CGG | - | chr4.1:9015285-9015304 | MS.gene70278:intron | 45.0% |
| ! | TATGTTTGATCCAAGCACCG+AGG | - | chr4.1:9018303-9018322 | MS.gene70278:intron | 45.0% |
| ! | TGTGTACACAGAAGAAGTGC+AGG | - | chr4.1:9018644-9018663 | MS.gene70278:intron | 45.0% |
| !! | ACTTGACTTGCAGGAGATTC+AGG | - | chr4.1:9014179-9014198 | MS.gene70278:CDS | 45.0% |
| !! | CCTAAGTAGGGTTGGCTATA+TGG | + | chr4.1:9013567-9013586 | None:intergenic | 45.0% |
| !! | CTTGACTTGCAGGAGATTCA+GGG | - | chr4.1:9014180-9014199 | MS.gene70278:CDS | 45.0% |
| !! | TATTGGGATGGAGTGTTGGA+AGG | - | chr4.1:9013076-9013095 | MS.gene70278:intron | 45.0% |
| !! | TCACCGCACTTTCACTTTTC+AGG | - | chr4.1:9017841-9017860 | MS.gene70278:intron | 45.0% |
| !!! | ACTGTTTTTGCCTACCAGGT+TGG | - | chr4.1:9014253-9014272 | MS.gene70278:intron | 45.0% |
| !!! | GAGAACTGTTTTTGCCTACC+AGG | - | chr4.1:9014249-9014268 | MS.gene70278:intron | 45.0% |
| !!! | TGTTTTTGGGACCAACCAAC+CGG | - | chr4.1:9017788-9017807 | MS.gene70278:intron | 45.0% |
| !!! | TTTTTGCCTACCAGGTTGGT+TGG | - | chr4.1:9014257-9014276 | MS.gene70278:intron | 45.0% |
| !! | AACAAAATAAAATAAATAAA+AGG | + | chr4.1:9015696-9015715 | None:intergenic | 5.0% |
| !! | TTAAATAGTATAAATTTATA+CGG | - | chr4.1:9014301-9014320 | MS.gene70278:CDS | 5.0% |
| AAACTAAGGACCCGGTTGGT+TGG | + | chr4.1:9017802-9017821 | None:intergenic | 50.0% | |
| ACTGACGCAGGTATAACACC+TGG | + | chr4.1:9018208-9018227 | None:intergenic | 50.0% | |
| ACTTCTCGGGCAACCTGTAA+TGG | - | chr4.1:9016433-9016452 | MS.gene70278:intron | 50.0% | |
| AGAGAGAAAAGGAGAGGGAG+AGG | - | chr4.1:9012724-9012743 | MS.gene70278:CDS | 50.0% | |
| AGGAGAAAGAGAGACCAAGG+AGG | - | chr4.1:9012823-9012842 | MS.gene70278:intron | 50.0% | |
| AGGTGGGAGAGATAAGGAGA+GGG | - | chr4.1:9012695-9012714 | MS.gene70278:CDS | 50.0% | |
| AGTAGGACCATATGGAGCAG+TGG | - | chr4.1:9016517-9016536 | MS.gene70278:intron | 50.0% | |
| ATGGATCTCAGTACCTCTCG+AGG | - | chr4.1:9013844-9013863 | MS.gene70278:intron | 50.0% | |
| CATCAAACTCCCTGTCGTTC+AGG | + | chr4.1:9017451-9017470 | None:intergenic | 50.0% | |
| CATTACTCCCTCCGAAGACT+GGG | - | chr4.1:9014029-9014048 | MS.gene70278:intron | 50.0% | |
| CCAGATTATCCTGGTATCCC+TGG | + | chr4.1:9013889-9013908 | None:intergenic | 50.0% | |
| CCAGGGATACCAGGATAATC+TGG | - | chr4.1:9013886-9013905 | MS.gene70278:intron | 50.0% | |
| CTCTCTGGCCAACTACTTCT+CGG | - | chr4.1:9016419-9016438 | MS.gene70278:intron | 50.0% | |
| CTTCCTCTTGACATGGAGAC+GGG | - | chr4.1:9016926-9016945 | MS.gene70278:intron | 50.0% | |
| GAACACCGTGAACGATCTTC+CGG | - | chr4.1:9012606-9012625 | MS.gene70278:intron | 50.0% | |
| GAGAAAGAGAGGGAGAAGGA+CGG | - | chr4.1:9012666-9012685 | MS.gene70278:CDS | 50.0% | |
| GAGAGATGTCCGTCTGATCA+TGG | - | chr4.1:9014751-9014770 | MS.gene70278:intron | 50.0% | |
| GAGGGATAGGGAGAGAGAAA+AGG | - | chr4.1:9012713-9012732 | MS.gene70278:CDS | 50.0% | |
| GCAGGGATGTGTAACTCACT+TGG | - | chr4.1:9013315-9013334 | MS.gene70278:intron | 50.0% | |
| GCTGCTGTAGTAGGACCATA+TGG | - | chr4.1:9016509-9016528 | MS.gene70278:intron | 50.0% | |
| GCTGTCCAGAGTTCGAATCT+TGG | - | chr4.1:9013342-9013361 | MS.gene70278:intron | 50.0% | |
| GGAAATTGGAGATTGCTGGC+AGG | - | chr4.1:9017104-9017123 | MS.gene70278:intron | 50.0% | |
| GGAACGGGAGAGAAGAGATA+AGG | - | chr4.1:9012767-9012786 | MS.gene70278:intron | 50.0% | |
| GGAGAGATAAGGAGAGGGAT+AGG | - | chr4.1:9012700-9012719 | MS.gene70278:CDS | 50.0% | |
| GGGAGAGGAGAGATAAGGAA+AGG | - | chr4.1:9012739-9012758 | MS.gene70278:CDS | 50.0% | |
| GGGCCTGAAAAGTGAAAGTG+CGG | + | chr4.1:9017847-9017866 | None:intergenic | 50.0% | |
| GTAGGATGGTTACCCACTAC+TGG | + | chr4.1:9015208-9015227 | None:intergenic | 50.0% | |
| GTGTGCGTGCGTGCAAATAA+AGG | + | chr4.1:9015275-9015294 | None:intergenic | 50.0% | |
| GTGTTACCAAACACAGCCGT+AGG | + | chr4.1:9015510-9015529 | None:intergenic | 50.0% | |
| GTTCTTCTCGAAAGCTGGCA+AGG | - | chr4.1:9014426-9014445 | MS.gene70278:intron | 50.0% | |
| TCATTACTCCCTCCGAAGAC+TGG | - | chr4.1:9014028-9014047 | MS.gene70278:intron | 50.0% | |
| TCTCTGGCCAACTACTTCTC+GGG | - | chr4.1:9016420-9016439 | MS.gene70278:intron | 50.0% | |
| TGAGAGAGGTGGGAGAGATA+AGG | - | chr4.1:9012689-9012708 | MS.gene70278:CDS | 50.0% | |
| TGATGCGATGTCAGTGCCAA+TGG | - | chr4.1:9016388-9016407 | MS.gene70278:intron | 50.0% | |
| TGGATCTCAGTACCTCTCGA+GGG | - | chr4.1:9013845-9013864 | MS.gene70278:intron | 50.0% | |
| TGTGCCAACTGTGAATGGGT+CGG | - | chr4.1:9018144-9018163 | MS.gene70278:intron | 50.0% | |
| TGTTTCCCTACGGCTGTGTT+TGG | - | chr4.1:9015501-9015520 | MS.gene70278:intron | 50.0% | |
| TTATCCTGGTATCCCTGGTC+GGG | + | chr4.1:9013884-9013903 | None:intergenic | 50.0% | |
| ! | ACATGAGATGGTTTGCACGC+AGG | - | chr4.1:9018726-9018745 | MS.gene70278:intron | 50.0% |
| ! | ACGGGCTGAGAGAGAAAAAG+AGG | - | chr4.1:9012803-9012822 | MS.gene70278:intron | 50.0% |
| ! | AGCATGCCTTTTGGCAATCC+AGG | - | chr4.1:9018187-9018206 | MS.gene70278:intron | 50.0% |
| ! | AGTCTCTCACGTTGGTGTCT+AGG | - | chr4.1:9015141-9015160 | MS.gene70278:intron | 50.0% |
| ! | CATGCAGCCCCCTTATTTGT+AGG | + | chr4.1:9014644-9014663 | None:intergenic | 50.0% |
| ! | CCCCCTTATTTGTAGGAACG+TGG | + | chr4.1:9014637-9014656 | None:intergenic | 50.0% |
| ! | TGTGTTGGTAGAACTGACGC+AGG | + | chr4.1:9018220-9018239 | None:intergenic | 50.0% |
| !! | ATTCCTACTGGTTCTGCCAC+AGG | + | chr4.1:9018256-9018275 | None:intergenic | 50.0% |
| !! | CGACGAGAATGGCTCTAAGA+AGG | - | chr4.1:9012548-9012567 | MS.gene70278:intron | 50.0% |
| !! | CTGGTACTGACATTCCCACA+AGG | - | chr4.1:9018046-9018065 | MS.gene70278:intron | 50.0% |
| !! | CTTTTCAGGCCCCTTTCTGT+TGG | - | chr4.1:9017855-9017874 | MS.gene70278:intron | 50.0% |
| !! | GCTCTAAGAAGGATCGCGAT+AGG | - | chr4.1:9012559-9012578 | MS.gene70278:intron | 50.0% |
| !! | TCATCACAAACCTCGGTGCT+TGG | + | chr4.1:9018316-9018335 | None:intergenic | 50.0% |
| !! | TTCCTACTGGTTCTGCCACA+GGG | + | chr4.1:9018255-9018274 | None:intergenic | 50.0% |
| !!! | GTTTTTGGGACCAACCAACC+GGG | - | chr4.1:9017789-9017808 | MS.gene70278:intron | 50.0% |
| AACCTGAGGCAGACCCAGAA+AGG | - | chr4.1:9014221-9014240 | MS.gene70278:intron | 55.0% | |
| AACGATCTTCCGGTCGTCAC+CGG | - | chr4.1:9012616-9012635 | MS.gene70278:intron | 55.0% | |
| AAGATGGGGTGGTGTGTGTG+TGG | + | chr4.1:9015100-9015119 | None:intergenic | 55.0% | |
| ACAAGTCATGCCTACCCCTG+TGG | - | chr4.1:9018237-9018256 | MS.gene70278:intron | 55.0% | |
| ACCTGAGGCAGACCCAGAAA+GGG | - | chr4.1:9014222-9014241 | MS.gene70278:intron | 55.0% | |
| AGAAGGACGGTGAGAGAGGT+GGG | - | chr4.1:9012679-9012698 | MS.gene70278:CDS | 55.0% | |
| AGGCAACCAACCAACCTGGT+AGG | + | chr4.1:9014266-9014285 | None:intergenic | 55.0% | |
| AGTCGTCCTGAGAGAGACAG+AGG | - | chr4.1:9012852-9012871 | MS.gene70278:intron | 55.0% | |
| ATGGAGACGGGACACTGCAA+GGG | - | chr4.1:9016938-9016957 | MS.gene70278:intron | 55.0% | |
| ATGGAGGCAACCAACCAACC+TGG | + | chr4.1:9014270-9014289 | None:intergenic | 55.0% | |
| CACTCGCTGGGAATTCCTAC+TGG | + | chr4.1:9018268-9018287 | None:intergenic | 55.0% | |
| CAGGTTGCCCGAGAAGTAGT+TGG | + | chr4.1:9016430-9016449 | None:intergenic | 55.0% | |
| CCAAATTGGCGCCCAGTCTT+CGG | + | chr4.1:9014043-9014062 | None:intergenic | 55.0% | |
| CCAATGGCAATTGCGCTCTC+TGG | - | chr4.1:9016404-9016423 | MS.gene70278:intron | 55.0% | |
| CGAGTACTTGGAGAAGACGG+TGG | - | chr4.1:9012377-9012396 | MS.gene70278:CDS | 55.0% | |
| GACGACCGGAAGATCGTTCA+CGG | + | chr4.1:9012614-9012633 | None:intergenic | 55.0% | |
| GACTGAGGCTAATCTCCGAG+AGG | - | chr4.1:9016577-9016596 | MS.gene70278:intron | 55.0% | |
| GAGAGGACTTACCGGAAGCA+CGG | - | chr4.1:9012465-9012484 | MS.gene70278:intron | 55.0% | |
| GAGGTGGGAGAGATAAGGAG+AGG | - | chr4.1:9012694-9012713 | MS.gene70278:CDS | 55.0% | |
| GGAACCGACCCATTCACAGT+TGG | + | chr4.1:9018151-9018170 | None:intergenic | 55.0% | |
| GGACGACTCATACTCCTCCT+TGG | + | chr4.1:9012840-9012859 | None:intergenic | 55.0% | |
| GGAGAGGGAGAGGAGAGATA+AGG | - | chr4.1:9012734-9012753 | MS.gene70278:CDS | 55.0% | |
| GGCACACCAATGCTGCAGTT+GGG | + | chr4.1:9018130-9018149 | None:intergenic | 55.0% | |
| GGTGTTCACGGTCACGTTCA+CGG | + | chr4.1:9012593-9012612 | None:intergenic | 55.0% | |
| GTACTTGGAGAAGACGGTGG+AGG | - | chr4.1:9012380-9012399 | MS.gene70278:CDS | 55.0% | |
| GTGCTTCCGGTAAGTCCTCT+CGG | + | chr4.1:9012466-9012485 | None:intergenic | 55.0% | |
| TCCAGTGGAGCTGCTGTAGT+AGG | - | chr4.1:9016500-9016519 | MS.gene70278:intron | 55.0% | |
| TCCTACTACAGCAGCTCCAC+TGG | + | chr4.1:9016504-9016523 | None:intergenic | 55.0% | |
| TGGCACACCAATGCTGCAGT+TGG | + | chr4.1:9018131-9018150 | None:intergenic | 55.0% | |
| TGTCCCGTCTCCATGTCAAG+AGG | + | chr4.1:9016932-9016951 | None:intergenic | 55.0% | |
| ! | ACGGGACACTGCAAGGGTTT+TGG | - | chr4.1:9016944-9016963 | MS.gene70278:intron | 55.0% |
| ! | CCAGAGAGCGCAATTGCCAT+TGG | + | chr4.1:9016407-9016426 | None:intergenic | 55.0% |
| ! | CGGGACACTGCAAGGGTTTT+GGG | - | chr4.1:9016945-9016964 | MS.gene70278:intron | 55.0% |
| ! | GATGGGTGATGGCTGATAGC+TGG | + | chr4.1:9016183-9016202 | None:intergenic | 55.0% |
| ! | GGGGTAGGCATGACTTGTGT+TGG | + | chr4.1:9018235-9018254 | None:intergenic | 55.0% |
| !! | ACCTCTCGAGGGATTAGTCC+TGG | - | chr4.1:9013856-9013875 | MS.gene70278:intron | 55.0% |
| !! | TCCTACTGGTTCTGCCACAG+GGG | + | chr4.1:9018254-9018273 | None:intergenic | 55.0% |
| AATTGGCGCCCAGTCTTCGG+AGG | + | chr4.1:9014040-9014059 | None:intergenic | 60.0% | |
| ACCCCTGTGGCAGAACCAGT+AGG | - | chr4.1:9018250-9018269 | MS.gene70278:intron | 60.0% | |
| ACGATCTTCCGGTCGTCACC+GGG | - | chr4.1:9012617-9012636 | MS.gene70278:intron | 60.0% | |
| AGGGAGAAGGACGGTGAGAG+AGG | - | chr4.1:9012675-9012694 | MS.gene70278:CDS | 60.0% | |
| ATCTCGACGGCGGCGAAGAT+AGG | - | chr4.1:9012499-9012518 | MS.gene70278:intron | 60.0% | |
| ATGGGGTGGTGTGTGTGTGG+AGG | + | chr4.1:9015097-9015116 | None:intergenic | 60.0% | |
| ATTAGTCCTGGCTCCCGACC+AGG | - | chr4.1:9013868-9013887 | MS.gene70278:intron | 60.0% | |
| ATTGGCGCCCAGTCTTCGGA+GGG | + | chr4.1:9014039-9014058 | None:intergenic | 60.0% | |
| CATGGAGACGGGACACTGCA+AGG | - | chr4.1:9016937-9016956 | MS.gene70278:intron | 60.0% | |
| CCGAAGACTGGGCGCCAATT+TGG | - | chr4.1:9014040-9014059 | MS.gene70278:intron | 60.0% | |
| CGCTCTCCTCTGTCTCTCTC+AGG | + | chr4.1:9012861-9012880 | None:intergenic | 60.0% | |
| CTCTCTCTTCGTCCCTCTCC+CGG | + | chr4.1:9012638-9012657 | None:intergenic | 60.0% | |
| GAAGACGGTGGAGGAGCAAC+CGG | - | chr4.1:9012389-9012408 | MS.gene70278:intron | 60.0% | |
| GAGAAGGACGGTGAGAGAGG+TGG | - | chr4.1:9012678-9012697 | MS.gene70278:CDS | 60.0% | |
| GCCAGGACTAATCCCTCGAG+AGG | + | chr4.1:9013860-9013879 | None:intergenic | 60.0% | |
| GCGAAGATAGGCGGAGCAAG+AGG | - | chr4.1:9012511-9012530 | MS.gene70278:intron | 60.0% | |
| GGAGGAGCAACCGGAAGACA+AGG | - | chr4.1:9012398-9012417 | MS.gene70278:intron | 60.0% | |
| TCCCTTTCTGGGTCTGCCTC+AGG | + | chr4.1:9014226-9014245 | None:intergenic | 60.0% | |
| TGGGGTGGTGTGTGTGTGGA+GGG | + | chr4.1:9015096-9015115 | None:intergenic | 60.0% | |
| TTAGTCCTGGCTCCCGACCA+GGG | - | chr4.1:9013869-9013888 | MS.gene70278:intron | 60.0% | |
| ! | TGGGTCGGTTCCTGTTCAGC+AGG | - | chr4.1:9018159-9018178 | MS.gene70278:intron | 60.0% |
| !! | ACTGGTTCTGCCACAGGGGT+AGG | + | chr4.1:9018250-9018269 | None:intergenic | 60.0% |
| AGGCGGAGCAAGAGGTCACG+CGG | - | chr4.1:9012519-9012538 | MS.gene70278:intron | 65.0% | |
| CGGGAGAGGGACGAAGAGAG+AGG | - | chr4.1:9012636-9012655 | MS.gene70278:intron | 65.0% | |
| GGGGTGGTGTGTGTGTGGAG+GGG | + | chr4.1:9015095-9015114 | None:intergenic | 65.0% | |
| GTGGTGTGTGTGTGGAGGGG+AGG | + | chr4.1:9015092-9015111 | None:intergenic | 65.0% | |
| TCGACGGCGGCGAAGATAGG+CGG | - | chr4.1:9012502-9012521 | MS.gene70278:intron | 65.0% | |
| TTCCGGTCGTCACCGGGAGA+GGG | - | chr4.1:9012623-9012642 | MS.gene70278:intron | 65.0% | |
| CGCGGCGGAGACGACGAGAA+TGG | - | chr4.1:9012537-9012556 | MS.gene70278:intron | 70.0% | |
| CGGAGCAAGAGGTCACGCGG+CGG | - | chr4.1:9012522-9012541 | MS.gene70278:intron | 70.0% | |
| CTTCCGGTCGTCACCGGGAG+AGG | - | chr4.1:9012622-9012641 | MS.gene70278:intron | 70.0% | |
| GCCGACGACGATCTCGACGG+CGG | - | chr4.1:9012489-9012508 | MS.gene70278:intron | 70.0% | |
| GCCGCCGTCGAGATCGTCGT+CGG | + | chr4.1:9012493-9012512 | None:intergenic | 70.0% | |
| GGCTCCCGACCAGGGATACC+AGG | - | chr4.1:9013877-9013896 | MS.gene70278:intron | 70.0% | |
| GGTATCCCTGGTCGGGAGCC+AGG | + | chr4.1:9013877-9013896 | None:intergenic | 70.0% | |
| GTCCCTCTCCCGGTGACGAC+CGG | + | chr4.1:9012628-9012647 | None:intergenic | 70.0% | |
| !! | GGCGCCGACGACGATCTCGA+CGG | - | chr4.1:9012486-9012505 | MS.gene70278:intron | 70.0% |
| CGTCGTCGGCGCCGTGCTTC+CGG | + | chr4.1:9012479-9012498 | None:intergenic | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr4.1 | gene | 9012360 | 9019068 | 9012360 | ID=MS.gene70278 |
| chr4.1 | mRNA | 9012360 | 9019068 | 9012360 | ID=MS.gene70278.t1;Parent=MS.gene70278 |
| chr4.1 | exon | 9018816 | 9019068 | 9018816 | ID=MS.gene70278.t1.exon1;Parent=MS.gene70278.t1 |
| chr4.1 | CDS | 9018816 | 9019068 | 9018816 | ID=cds.MS.gene70278.t1;Parent=MS.gene70278.t1 |
| chr4.1 | exon | 9017602 | 9017626 | 9017602 | ID=MS.gene70278.t1.exon2;Parent=MS.gene70278.t1 |
| chr4.1 | CDS | 9017602 | 9017626 | 9017602 | ID=cds.MS.gene70278.t1;Parent=MS.gene70278.t1 |
| chr4.1 | exon | 9017158 | 9017236 | 9017158 | ID=MS.gene70278.t1.exon3;Parent=MS.gene70278.t1 |
| chr4.1 | CDS | 9017158 | 9017236 | 9017158 | ID=cds.MS.gene70278.t1;Parent=MS.gene70278.t1 |
| chr4.1 | exon | 9016981 | 9017037 | 9016981 | ID=MS.gene70278.t1.exon4;Parent=MS.gene70278.t1 |
| chr4.1 | CDS | 9016981 | 9017037 | 9016981 | ID=cds.MS.gene70278.t1;Parent=MS.gene70278.t1 |
| chr4.1 | exon | 9016624 | 9016679 | 9016624 | ID=MS.gene70278.t1.exon5;Parent=MS.gene70278.t1 |
| chr4.1 | CDS | 9016624 | 9016679 | 9016624 | ID=cds.MS.gene70278.t1;Parent=MS.gene70278.t1 |
| chr4.1 | exon | 9014830 | 9015055 | 9014830 | ID=MS.gene70278.t1.exon6;Parent=MS.gene70278.t1 |
| chr4.1 | CDS | 9014830 | 9015055 | 9014830 | ID=cds.MS.gene70278.t1;Parent=MS.gene70278.t1 |
| chr4.1 | exon | 9014452 | 9014538 | 9014452 | ID=MS.gene70278.t1.exon7;Parent=MS.gene70278.t1 |
| chr4.1 | CDS | 9014452 | 9014538 | 9014452 | ID=cds.MS.gene70278.t1;Parent=MS.gene70278.t1 |
| chr4.1 | exon | 9014293 | 9014367 | 9014293 | ID=MS.gene70278.t1.exon8;Parent=MS.gene70278.t1 |
| chr4.1 | CDS | 9014293 | 9014367 | 9014293 | ID=cds.MS.gene70278.t1;Parent=MS.gene70278.t1 |
| chr4.1 | exon | 9014119 | 9014199 | 9014119 | ID=MS.gene70278.t1.exon9;Parent=MS.gene70278.t1 |
| chr4.1 | CDS | 9014119 | 9014199 | 9014119 | ID=cds.MS.gene70278.t1;Parent=MS.gene70278.t1 |
| chr4.1 | exon | 9013361 | 9013425 | 9013361 | ID=MS.gene70278.t1.exon10;Parent=MS.gene70278.t1 |
| chr4.1 | CDS | 9013361 | 9013425 | 9013361 | ID=cds.MS.gene70278.t1;Parent=MS.gene70278.t1 |
| chr4.1 | exon | 9013104 | 9013290 | 9013104 | ID=MS.gene70278.t1.exon11;Parent=MS.gene70278.t1 |
| chr4.1 | CDS | 9013104 | 9013290 | 9013104 | ID=cds.MS.gene70278.t1;Parent=MS.gene70278.t1 |
| chr4.1 | exon | 9012926 | 9013014 | 9012926 | ID=MS.gene70278.t1.exon12;Parent=MS.gene70278.t1 |
| chr4.1 | CDS | 9012926 | 9013014 | 9012926 | ID=cds.MS.gene70278.t1;Parent=MS.gene70278.t1 |
| chr4.1 | exon | 9012659 | 9012773 | 9012659 | ID=MS.gene70278.t1.exon13;Parent=MS.gene70278.t1 |
| chr4.1 | CDS | 9012659 | 9012773 | 9012659 | ID=cds.MS.gene70278.t1;Parent=MS.gene70278.t1 |
| chr4.1 | exon | 9012360 | 9012401 | 9012360 | ID=MS.gene70278.t1.exon14;Parent=MS.gene70278.t1 |
| chr4.1 | CDS | 9012360 | 9012401 | 9012360 | ID=cds.MS.gene70278.t1;Parent=MS.gene70278.t1 |
| Gene Sequence |
| Protein sequence |
