Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70635.t1 | XP_024635366.1 | 98.1 | 413 | 5 | 1 | 1 | 413 | 1 | 410 | 1.30E-180 | 642.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70635.t1 | P52178 | 80.9 | 324 | 58 | 1 | 90 | 413 | 83 | 402 | 9.5e-143 | 508.1 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70635.t1 | G7J5E5 | 98.1 | 413 | 5 | 1 | 1 | 413 | 1 | 410 | 9.7e-181 | 642.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene055701 | MS.gene70635 | -0.801989 | 6.94E-49 | -1.69E-46 |
| MS.gene059161 | MS.gene70635 | -0.813788 | 2.14E-51 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70635.t1 | MTR_3g077640 | 97.821 | 413 | 6 | 1 | 1 | 413 | 1 | 410 | 0.0 | 809 |
| MS.gene70635.t1 | MTR_4g105630 | 78.431 | 306 | 64 | 1 | 107 | 412 | 79 | 382 | 5.23e-178 | 501 |
| MS.gene70635.t1 | MTR_4g105630 | 78.472 | 288 | 62 | 0 | 107 | 394 | 79 | 366 | 4.86e-168 | 476 |
| MS.gene70635.t1 | MTR_6g005480 | 69.632 | 326 | 96 | 1 | 90 | 412 | 90 | 415 | 3.84e-158 | 452 |
| MS.gene70635.t1 | MTR_4g105630 | 77.551 | 245 | 55 | 0 | 107 | 351 | 79 | 323 | 3.57e-139 | 402 |
| MS.gene70635.t1 | MTR_4g105630 | 77.674 | 215 | 48 | 0 | 107 | 321 | 79 | 293 | 7.99e-120 | 352 |
| MS.gene70635.t1 | MTR_3g049400 | 40.615 | 325 | 188 | 4 | 83 | 405 | 80 | 401 | 1.13e-67 | 220 |
| MS.gene70635.t1 | MTR_2g022700 | 39.769 | 347 | 190 | 6 | 75 | 405 | 52 | 395 | 5.09e-67 | 218 |
| MS.gene70635.t1 | MTR_2g029180 | 41.081 | 370 | 198 | 9 | 43 | 402 | 33 | 392 | 9.54e-67 | 218 |
| MS.gene70635.t1 | MTR_4g088350 | 38.235 | 340 | 189 | 7 | 85 | 413 | 69 | 398 | 1.32e-64 | 212 |
| MS.gene70635.t1 | MTR_5g044220 | 36.765 | 340 | 197 | 4 | 88 | 413 | 68 | 403 | 1.32e-62 | 207 |
| MS.gene70635.t1 | MTR_4g088350 | 40.141 | 284 | 148 | 7 | 139 | 413 | 17 | 287 | 2.25e-56 | 187 |
| MS.gene70635.t1 | MTR_4g131800 | 39.481 | 347 | 175 | 6 | 83 | 404 | 78 | 414 | 1.05e-55 | 198 |
| MS.gene70635.t1 | MTR_3g072380 | 29.630 | 324 | 196 | 14 | 103 | 409 | 3 | 311 | 1.35e-23 | 101 |
| MS.gene70635.t1 | MTR_1g030320 | 29.206 | 315 | 194 | 13 | 106 | 409 | 14 | 310 | 2.42e-22 | 97.4 |
| MS.gene70635.t1 | MTR_4g018760 | 27.181 | 298 | 195 | 8 | 120 | 405 | 20 | 307 | 4.47e-20 | 90.5 |
| MS.gene70635.t1 | MTR_3g070000 | 27.948 | 229 | 155 | 3 | 181 | 405 | 97 | 319 | 5.83e-18 | 84.7 |
| MS.gene70635.t1 | MTR_5g081710 | 28.511 | 235 | 156 | 4 | 173 | 405 | 79 | 303 | 4.06e-17 | 82.0 |
| MS.gene70635.t1 | MTR_3g462070 | 25.497 | 302 | 218 | 5 | 115 | 412 | 12 | 310 | 6.46e-17 | 81.3 |
| MS.gene70635.t1 | MTR_3g072380 | 32.418 | 182 | 102 | 7 | 106 | 278 | 15 | 184 | 1.29e-15 | 76.3 |
| MS.gene70635.t1 | MTR_8g090130 | 26.389 | 216 | 151 | 2 | 193 | 405 | 96 | 306 | 1.63e-15 | 77.4 |
| MS.gene70635.t1 | MTR_4g101860 | 26.923 | 234 | 164 | 4 | 178 | 409 | 122 | 350 | 1.17e-11 | 66.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70635.t1 | AT5G33320 | 69.471 | 416 | 116 | 5 | 1 | 413 | 1 | 408 | 0.0 | 544 |
| MS.gene70635.t1 | AT3G01550 | 62.154 | 325 | 119 | 2 | 89 | 410 | 55 | 378 | 1.12e-134 | 391 |
| MS.gene70635.t1 | AT3G01550 | 60.923 | 325 | 118 | 3 | 89 | 410 | 55 | 373 | 2.06e-128 | 375 |
| MS.gene70635.t1 | AT5G17630 | 41.429 | 350 | 194 | 5 | 63 | 409 | 67 | 408 | 1.97e-75 | 241 |
| MS.gene70635.t1 | AT5G54800 | 41.956 | 317 | 178 | 3 | 92 | 404 | 73 | 387 | 4.00e-69 | 224 |
| MS.gene70635.t1 | AT1G61800 | 40.176 | 341 | 192 | 5 | 67 | 405 | 58 | 388 | 5.10e-67 | 218 |
| MS.gene70635.t1 | AT1G61800 | 40.176 | 341 | 192 | 5 | 67 | 405 | 58 | 388 | 6.66e-67 | 218 |
| MS.gene70635.t1 | AT5G46110 | 35.475 | 358 | 209 | 6 | 70 | 411 | 54 | 405 | 6.42e-65 | 213 |
| MS.gene70635.t1 | AT5G46110 | 36.111 | 360 | 208 | 7 | 70 | 413 | 54 | 407 | 1.05e-64 | 213 |
| MS.gene70635.t1 | AT5G46110 | 38.926 | 298 | 171 | 5 | 119 | 411 | 1 | 292 | 4.74e-63 | 205 |
| MS.gene70635.t1 | AT5G46110 | 34.167 | 360 | 204 | 7 | 70 | 413 | 54 | 396 | 3.98e-59 | 198 |
| MS.gene70635.t1 | AT1G21870 | 29.846 | 325 | 183 | 13 | 106 | 411 | 15 | 313 | 2.17e-24 | 103 |
| MS.gene70635.t1 | AT1G77610 | 28.037 | 321 | 204 | 11 | 99 | 409 | 2 | 305 | 3.16e-22 | 97.1 |
| MS.gene70635.t1 | AT4G03950 | 28.339 | 307 | 155 | 11 | 106 | 407 | 11 | 257 | 4.43e-21 | 92.8 |
| MS.gene70635.t1 | AT3G10290 | 25.733 | 307 | 210 | 6 | 109 | 405 | 54 | 352 | 1.69e-20 | 92.4 |
| MS.gene70635.t1 | AT3G11320 | 27.027 | 296 | 205 | 6 | 120 | 409 | 18 | 308 | 5.71e-19 | 87.4 |
| MS.gene70635.t1 | AT5G05820 | 27.055 | 292 | 203 | 5 | 120 | 405 | 18 | 305 | 9.61e-19 | 86.7 |
| MS.gene70635.t1 | AT1G43310 | 74.468 | 47 | 12 | 0 | 225 | 271 | 41 | 87 | 1.42e-17 | 77.8 |
| MS.gene70635.t1 | AT5G04160 | 26.349 | 315 | 208 | 8 | 104 | 405 | 3 | 306 | 1.50e-17 | 83.2 |
| MS.gene70635.t1 | AT1G12500 | 28.270 | 237 | 157 | 5 | 175 | 409 | 131 | 356 | 1.14e-15 | 78.2 |
| MS.gene70635.t1 | AT1G06470 | 22.488 | 418 | 264 | 14 | 22 | 412 | 2 | 386 | 8.03e-13 | 70.1 |
| MS.gene70635.t1 | AT1G06470 | 22.488 | 418 | 264 | 14 | 22 | 412 | 2 | 386 | 8.03e-13 | 70.1 |
| MS.gene70635.t1 | AT1G06470 | 22.488 | 418 | 264 | 14 | 22 | 412 | 2 | 386 | 8.03e-13 | 70.1 |
| MS.gene70635.t1 | AT1G06470 | 22.488 | 418 | 264 | 14 | 22 | 412 | 2 | 386 | 8.03e-13 | 70.1 |
| MS.gene70635.t1 | AT3G17430 | 25.168 | 298 | 199 | 8 | 129 | 413 | 28 | 314 | 6.95e-12 | 67.0 |
| MS.gene70635.t1 | AT3G17430 | 25.168 | 298 | 199 | 8 | 129 | 413 | 28 | 314 | 6.95e-12 | 67.0 |
| MS.gene70635.t1 | AT4G32390 | 23.708 | 329 | 226 | 8 | 98 | 413 | 2 | 318 | 1.26e-11 | 65.9 |
| MS.gene70635.t1 | AT5G11230 | 23.810 | 315 | 225 | 8 | 98 | 404 | 2 | 309 | 3.84e-11 | 64.7 |
Find 116 sgRNAs with CRISPR-Local
Find 261 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTGGATCCTTGTTCGGTTTA+TGG | 0.127694 | 3.1:+63831819 | MS.gene70635:CDS |
| GCGGAGTCACCAGCGCTTTC+GGG | 0.195666 | 3.1:-63831761 | None:intergenic |
| GGCGGAGTCACCAGCGCTTT+CGG | 0.269788 | 3.1:-63831762 | None:intergenic |
| GTCTCTCCTGTGAATGCTTT+TGG | 0.293260 | 3.1:+63835062 | MS.gene70635:CDS |
| CTCGCTATTGTGCATACTTT+GGG | 0.297295 | 3.1:+63832361 | MS.gene70635:CDS |
| GTCGTTGTTGTTAGATGATT+TGG | 0.302177 | 3.1:-63831576 | None:intergenic |
| TGAACTACAGTCACGGTTAC+AGG | 0.306882 | 3.1:-63832043 | None:intergenic |
| TTGCCGACGGAATGGGTAAC+AGG | 0.314706 | 3.1:-63834984 | None:intergenic |
| TGGGGTTGGTGTGGAGAGGG+AGG | 0.317556 | 3.1:-63831514 | None:intergenic |
| TGGTGTGGAGAGGGAGGGTA+GGG | 0.320081 | 3.1:-63831508 | None:intergenic |
| CGGCGGAGAGACGGAGGTTA+AGG | 0.320918 | 3.1:-63831553 | None:intergenic |
| ATCCTTTCTGCAATGTTCCT+TGG | 0.335342 | 3.1:+63832469 | MS.gene70635:CDS |
| ACGTAATGTTCTTAGCAAAA+AGG | 0.346379 | 3.1:+63833239 | MS.gene70635:CDS |
| CACCTTTCCAAGACTCATAT+TGG | 0.360488 | 3.1:-63832395 | None:intergenic |
| CTTCAGCTTGGATCCTTGTT+CGG | 0.377633 | 3.1:+63831812 | MS.gene70635:CDS |
| ACTCGCTATTGTGCATACTT+TGG | 0.384453 | 3.1:+63832360 | MS.gene70635:CDS |
| TTGGTGTGGAGAGGGAGGGT+AGG | 0.399116 | 3.1:-63831509 | None:intergenic |
| TTGTTTCTTTCAGGAATCAT+TGG | 0.401238 | 3.1:+63833373 | MS.gene70635:intron |
| CTGTTCTTGTAACCTTTATG+TGG | 0.412077 | 3.1:+63832080 | MS.gene70635:CDS |
| CTTCAATATTTACAACAAAC+AGG | 0.414806 | 3.1:+63831859 | MS.gene70635:CDS |
| AGGCCTACACCCTGGGTGAT+TGG | 0.426673 | 3.1:+63832987 | MS.gene70635:CDS |
| TTACTGAAGCCTCTTTCAAT+TGG | 0.432373 | 3.1:+63833051 | MS.gene70635:CDS |
| AGGGAGCGTCTGAAACGGTT+GGG | 0.432953 | 3.1:-63831533 | None:intergenic |
| AGCGCTTTCGGGGACGGAAG+TGG | 0.442160 | 3.1:-63831750 | None:intergenic |
| GGTTCACTCGTGCCTATTGT+TGG | 0.445657 | 3.1:+63833008 | MS.gene70635:CDS |
| ACAGCAGATTGCAGGTAAGC+AGG | 0.445859 | 3.1:-63833485 | None:intergenic |
| AGATACTCACAGCAGATTGC+AGG | 0.447914 | 3.1:-63833493 | None:intergenic |
| GAAAGAAGAGGAAGAGGAAG+AGG | 0.453405 | 3.1:-63831675 | None:intergenic |
| AGTGCAACTCCACCAACAAT+AGG | 0.455372 | 3.1:-63833020 | None:intergenic |
| GAGTGCAGCAAGAAGAGATC+TGG | 0.457303 | 3.1:-63833638 | None:intergenic |
| CTTCATTCACTCGTCAATCA+TGG | 0.462555 | 3.1:+63831639 | MS.gene70635:CDS |
| GAATTTGAAAGAAGAGGAAG+AGG | 0.466601 | 3.1:-63831681 | None:intergenic |
| CACACAATTGCCGACGGAAT+GGG | 0.466624 | 3.1:-63834991 | None:intergenic |
| TTCTGCAATGTTCCTTGGAG+AGG | 0.467903 | 3.1:+63832474 | MS.gene70635:CDS |
| GGTGTGGAGAGGGAGGGTAG+GGG | 0.472217 | 3.1:-63831507 | None:intergenic |
| TAGATTTAGAGCCCACATAA+AGG | 0.472384 | 3.1:-63832092 | None:intergenic |
| GGCGGAGAGACGGAGGTTAA+GGG | 0.474532 | 3.1:-63831552 | None:intergenic |
| GAAGAGGAAGAGGAAGAGGA+AGG | 0.483385 | 3.1:-63831671 | None:intergenic |
| TGCTAAGAACATTACGTGAC+TGG | 0.485983 | 3.1:-63833233 | None:intergenic |
| GTCACCAGCGCTTTCGGGGA+CGG | 0.490017 | 3.1:-63831756 | None:intergenic |
| CAGATCTTACCAATTGAAAG+AGG | 0.491870 | 3.1:-63833060 | None:intergenic |
| ACTGTAGTTCAATTTGCTGT+TGG | 0.493045 | 3.1:+63832055 | MS.gene70635:CDS |
| GAGGGTAGGGGAGAGAGTGA+AGG | 0.493247 | 3.1:-63831495 | None:intergenic |
| TCACACAATTGCCGACGGAA+TGG | 0.493383 | 3.1:-63834992 | None:intergenic |
| GGGGTTGGTGTGGAGAGGGA+GGG | 0.496153 | 3.1:-63831513 | None:intergenic |
| TACTCACACAATTAAAGCTA+TGG | 0.496545 | 3.1:+63832429 | MS.gene70635:CDS |
| GCGTCTGAAACGGTTGGGGT+TGG | 0.501064 | 3.1:-63831528 | None:intergenic |
| CAGCAGATTGCAGGTAAGCA+GGG | 0.503249 | 3.1:-63833484 | None:intergenic |
| TGTTCTTGTAACCTTTATGT+GGG | 0.507076 | 3.1:+63832081 | MS.gene70635:CDS |
| TATTGTTGGTGGAGTTGCAC+TGG | 0.508448 | 3.1:+63833022 | MS.gene70635:CDS |
| GGTTGGGGTTGGTGTGGAGA+GGG | 0.509075 | 3.1:-63831517 | None:intergenic |
| AGCTCCCGCAGCTATCTTCA+TGG | 0.509736 | 3.1:+63833445 | MS.gene70635:CDS |
| TCGGGGACGGAAGTGGCTTG+AGG | 0.514782 | 3.1:-63831743 | None:intergenic |
| GCCTAAAATCACTGGTGCCA+TGG | 0.518278 | 3.1:+63832123 | MS.gene70635:CDS |
| GGTACCGCTATAGCTCTTGC+TGG | 0.520308 | 3.1:+63835179 | MS.gene70635:intron |
| CGGTTGGGGTTGGTGTGGAG+AGG | 0.521702 | 3.1:-63831518 | None:intergenic |
| AGGTCTGAATTTGAAAGAAG+AGG | 0.522741 | 3.1:-63831687 | None:intergenic |
| AAAGCATTCACAGGAGAGAC+AGG | 0.525906 | 3.1:-63835059 | None:intergenic |
| GAAGTAGGAACAAGAGGAAG+AGG | 0.529831 | 3.1:-63831707 | None:intergenic |
| CACCAATATGAGTCTTGGAA+AGG | 0.530315 | 3.1:+63832393 | MS.gene70635:CDS |
| GGCTTGAGGAGGAGAAAGAT+CGG | 0.533503 | 3.1:-63831729 | None:intergenic |
| TACAAGAGGCCTAAAATCAC+TGG | 0.538197 | 3.1:+63832115 | MS.gene70635:CDS |
| TTCTTACATGATATTGCAGA+GGG | 0.548286 | 3.1:+63834956 | MS.gene70635:CDS |
| AGATCGGAAGTAGGAACAAG+AGG | 0.551121 | 3.1:-63831713 | None:intergenic |
| AGAGGAAGAGGAAGGAGACA+TGG | 0.552637 | 3.1:-63831663 | None:intergenic |
| CCCTCCATGAAGATAGCTGC+GGG | 0.553556 | 3.1:-63833449 | None:intergenic |
| GGAGGAGAAAGATCGGAAGT+AGG | 0.554082 | 3.1:-63831722 | None:intergenic |
| GGGAGCGTCTGAAACGGTTG+GGG | 0.557883 | 3.1:-63831532 | None:intergenic |
| ATGATTTGGCGGCGGAGAGA+CGG | 0.559649 | 3.1:-63831562 | None:intergenic |
| TGCCGACGGAATGGGTAACA+GGG | 0.564452 | 3.1:-63834983 | None:intergenic |
| ACTTCCGTCCCCGAAAGCGC+TGG | 0.564558 | 3.1:+63831752 | MS.gene70635:CDS |
| TCTTTACCAAAAGCATTCAC+AGG | 0.565255 | 3.1:-63835068 | None:intergenic |
| TCACTCGTGCCTATTGTTGG+TGG | 0.566205 | 3.1:+63833011 | MS.gene70635:CDS |
| AAGGGAGCGTCTGAAACGGT+TGG | 0.567588 | 3.1:-63831534 | None:intergenic |
| CTAACAGAGGCCTACACCCT+GGG | 0.568546 | 3.1:+63832980 | MS.gene70635:intron |
| AACTCACTTGCTGATACGCA+TGG | 0.568987 | 3.1:-63833666 | None:intergenic |
| GGCTGGATTTGCGAGTGCAA+TGG | 0.570606 | 3.1:+63833194 | MS.gene70635:CDS |
| GAACCAATCACCCAGGGTGT+AGG | 0.571373 | 3.1:-63832990 | None:intergenic |
| TCTAACAGAGGCCTACACCC+TGG | 0.571500 | 3.1:+63832979 | MS.gene70635:intron |
| CAATATGAGTCTTGGAAAGG+TGG | 0.571553 | 3.1:+63832396 | MS.gene70635:CDS |
| AAAGGTCATGGTTAAGCAAG+AGG | 0.575123 | 3.1:+63833257 | MS.gene70635:CDS |
| TCCCCTGTTACCCATTCCGT+CGG | 0.576931 | 3.1:+63834981 | MS.gene70635:CDS |
| GTTGTTGTTAGATGATTTGG+CGG | 0.577181 | 3.1:-63831573 | None:intergenic |
| GAAAGGATGACAGAAAAGAA+AGG | 0.577210 | 3.1:-63832454 | None:intergenic |
| AGGGGAGAGAGTGAAGGCTG+TGG | 0.579441 | 3.1:-63831489 | None:intergenic |
| TATTGAAGTAGATGTTGAAG+AGG | 0.581047 | 3.1:-63831844 | None:intergenic |
| TCGCTATTGTGCATACTTTG+GGG | 0.588012 | 3.1:+63832362 | MS.gene70635:CDS |
| GAACTACAGTCACGGTTACA+GGG | 0.591540 | 3.1:-63832042 | None:intergenic |
| AACGACGGCGTAAATCTCAA+TGG | 0.595180 | 3.1:+63831593 | MS.gene70635:CDS |
| TGAAACGGTTGGGGTTGGTG+TGG | 0.596713 | 3.1:-63831523 | None:intergenic |
| GGTTAAGGGAGCGTCTGAAA+CGG | 0.598374 | 3.1:-63831538 | None:intergenic |
| GGGACGGAAGTGGCTTGAGG+AGG | 0.601394 | 3.1:-63831740 | None:intergenic |
| CTCCAAGGAACATTGCAGAA+AGG | 0.601742 | 3.1:-63832471 | None:intergenic |
| ACGTGACTGGTTTGTCACAT+TGG | 0.602709 | 3.1:-63833220 | None:intergenic |
| AGCAAATTGAACTACAGTCA+CGG | 0.606377 | 3.1:-63832050 | None:intergenic |
| CCCGCAGCTATCTTCATGGA+GGG | 0.610657 | 3.1:+63833449 | MS.gene70635:CDS |
| TTTCTTACATGATATTGCAG+AGG | 0.611685 | 3.1:+63834955 | MS.gene70635:CDS |
| GTTGTTAGATGATTTGGCGG+CGG | 0.614664 | 3.1:-63831570 | None:intergenic |
| CGGAGTCACCAGCGCTTTCG+GGG | 0.619544 | 3.1:-63831760 | None:intergenic |
| AACGCCAGCAAGAGCTATAG+CGG | 0.629902 | 3.1:-63835183 | None:intergenic |
| TTAGCACTCTAACCTCTCCA+AGG | 0.630079 | 3.1:-63832486 | None:intergenic |
| TCCCGCAGCTATCTTCATGG+AGG | 0.630179 | 3.1:+63833448 | MS.gene70635:CDS |
| CAATTGTGTGAAGCGTGTTG+TGG | 0.634531 | 3.1:+63835004 | MS.gene70635:CDS |
| ATTTGGCGGCGGAGAGACGG+AGG | 0.634566 | 3.1:-63831559 | None:intergenic |
| AAAGTATGCACAATAGCGAG+TGG | 0.638254 | 3.1:-63832358 | None:intergenic |
| GAGGTACCATAAACCGAACA+AGG | 0.639078 | 3.1:-63831825 | None:intergenic |
| AGCAGATTGCAGGTAAGCAG+GGG | 0.639869 | 3.1:-63833483 | None:intergenic |
| CACGAGTGAACCAATCACCC+AGG | 0.642426 | 3.1:-63832997 | None:intergenic |
| GGGCTCTAAATCTATACAAG+AGG | 0.650564 | 3.1:+63832101 | MS.gene70635:CDS |
| ACGCTTCACACAATTGCCGA+CGG | 0.667607 | 3.1:-63834997 | None:intergenic |
| ACCCTCCATGAAGATAGCTG+CGG | 0.681078 | 3.1:-63833450 | None:intergenic |
| ACGAGTGAACCAATCACCCA+GGG | 0.685336 | 3.1:-63832996 | None:intergenic |
| GCCGACGGAATGGGTAACAG+GGG | 0.690384 | 3.1:-63834982 | None:intergenic |
| CAACGAACTAGACTCGGCGG+CGG | 0.699628 | 3.1:-63831780 | None:intergenic |
| AAATCATCTAACAACAACGA+CGG | 0.712539 | 3.1:+63831578 | MS.gene70635:CDS |
| TAGCAACGAACTAGACTCGG+CGG | 0.750243 | 3.1:-63831783 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !!! | GTTTTTTGTTTATTTTAAAA+AGG | - | chr3.1:63834337-63834356 | None:intergenic | 10.0% |
| !! | TACAAAATATTAACAAATAG+CGG | - | chr3.1:63832809-63832828 | None:intergenic | 15.0% |
| !! | TCTTATTCTCAAATTATTAT+GGG | - | chr3.1:63832243-63832262 | None:intergenic | 15.0% |
| !!! | CTCTCATTATATTTTTTTAT+AGG | + | chr3.1:63835158-63835177 | MS.gene70635:intron | 15.0% |
| !! | AAAAAATATAATGAGAGTGA+AGG | - | chr3.1:63835155-63835174 | None:intergenic | 20.0% |
| !! | AAAAATATAATGAGAGTGAA+GGG | - | chr3.1:63835154-63835173 | None:intergenic | 20.0% |
| !! | AATACATTTGATGTATTCTA+AGG | + | chr3.1:63832918-63832937 | MS.gene70635:intron | 20.0% |
| !! | AATTGAGATGAAATAAATGA+GGG | - | chr3.1:63834022-63834041 | None:intergenic | 20.0% |
| !! | GAACAAGATTAAATTTAAAC+CGG | - | chr3.1:63832612-63832631 | None:intergenic | 20.0% |
| !! | TGTGTAATTGAAATTCTAAA+AGG | - | chr3.1:63833976-63833995 | None:intergenic | 20.0% |
| !!! | ACTCTTTTGATATATTTCTA+TGG | + | chr3.1:63832723-63832742 | MS.gene70635:intron | 20.0% |
| !!! | AGAGTATTTTATTTTCAATG+TGG | + | chr3.1:63831983-63832002 | MS.gene70635:intron | 20.0% |
| !!! | AGTAATATTTTTCTGTGAAT+GGG | + | chr3.1:63834924-63834943 | MS.gene70635:intron | 20.0% |
| !!! | ATTCCTTTAAAGAAAATAGA+GGG | - | chr3.1:63833731-63833750 | None:intergenic | 20.0% |
| !!! | GTCTTATTCTCAAATTATTA+TGG | - | chr3.1:63832244-63832263 | None:intergenic | 20.0% |
| !!! | TTTAAATTTTAATGAACGTC+AGG | + | chr3.1:63834267-63834286 | MS.gene70635:intron | 20.0% |
| ! | AACACATAACATCTAATTGA+AGG | - | chr3.1:63832293-63832312 | None:intergenic | 25.0% |
| ! | ACTTAAGCAACACTTAAATT+GGG | + | chr3.1:63834144-63834163 | MS.gene70635:intron | 25.0% |
| ! | ATACATTATCTTTCTTGACA+GGG | + | chr3.1:63833592-63833611 | MS.gene70635:intron | 25.0% |
| ! | ATATTACTCTTTCATTGCAT+TGG | - | chr3.1:63834912-63834931 | None:intergenic | 25.0% |
| ! | CATAAAATGTCTTCTTGAAT+GGG | - | chr3.1:63833313-63833332 | None:intergenic | 25.0% |
| ! | CTTCAATATTTACAACAAAC+AGG | + | chr3.1:63831859-63831878 | MS.gene70635:CDS | 25.0% |
| ! | GAATTGAGATGAAATAAATG+AGG | - | chr3.1:63834023-63834042 | None:intergenic | 25.0% |
| ! | GCATGTTATAAAACATTTCA+CGG | - | chr3.1:63833896-63833915 | None:intergenic | 25.0% |
| ! | TACTTAAGCAACACTTAAAT+TGG | + | chr3.1:63834143-63834162 | MS.gene70635:intron | 25.0% |
| ! | TACTTCATAAGATAATCTAC+AGG | - | chr3.1:63834751-63834770 | None:intergenic | 25.0% |
| ! | TATACATTATCTTTCTTGAC+AGG | + | chr3.1:63833591-63833610 | MS.gene70635:intron | 25.0% |
| ! | TCATAAAATGTCTTCTTGAA+TGG | - | chr3.1:63833314-63833333 | None:intergenic | 25.0% |
| ! | TGAATTCTAATATGCTTTGA+TGG | + | chr3.1:63833159-63833178 | MS.gene70635:intron | 25.0% |
| ! | TTGAGTTATACTATGAAACA+CGG | + | chr3.1:63832189-63832208 | MS.gene70635:intron | 25.0% |
| ! | TTTATTCATATTCCGCTATA+TGG | + | chr3.1:63832783-63832802 | MS.gene70635:intron | 25.0% |
| !! | CATTCCTTTAAAGAAAATAG+AGG | - | chr3.1:63833732-63833751 | None:intergenic | 25.0% |
| !! | GAGTAATATTTTTCTGTGAA+TGG | + | chr3.1:63834923-63834942 | MS.gene70635:intron | 25.0% |
| !! | TGGTTTGTAAAGAAAAGATT+CGG | + | chr3.1:63833127-63833146 | MS.gene70635:intron | 25.0% |
| !!! | ACAATGATTTTGTTTCTTTC+AGG | + | chr3.1:63833364-63833383 | MS.gene70635:intron | 25.0% |
| !!! | CTTTGATGGATTATTGAATA+GGG | + | chr3.1:63833173-63833192 | MS.gene70635:intron | 25.0% |
| !!! | TCTAGCTTTTGTATTGTAAT+TGG | + | chr3.1:63832888-63832907 | MS.gene70635:intron | 25.0% |
| AAAGAAATGCTGACATATGA+AGG | + | chr3.1:63834817-63834836 | MS.gene70635:intron | 30.0% | |
| AAAGAGAGAAGAAAATACCA+TGG | - | chr3.1:63832143-63832162 | None:intergenic | 30.0% | |
| AAATCATCTAACAACAACGA+CGG | + | chr3.1:63831578-63831597 | MS.gene70635:CDS | 30.0% | |
| AAGAAATGCTGACATATGAA+GGG | + | chr3.1:63834818-63834837 | MS.gene70635:intron | 30.0% | |
| ACGTAATGTTCTTAGCAAAA+AGG | + | chr3.1:63833239-63833258 | MS.gene70635:CDS | 30.0% | |
| AGACTAATTACAGTAACCAA+TGG | - | chr3.1:63832545-63832564 | None:intergenic | 30.0% | |
| AGTATGCATCAAACTATTAC+CGG | + | chr3.1:63832590-63832609 | MS.gene70635:intron | 30.0% | |
| ATTGTTTCGATTTCTAACAG+AGG | + | chr3.1:63832967-63832986 | MS.gene70635:intron | 30.0% | |
| CTTAAGCAACACTTAAATTG+GGG | + | chr3.1:63834145-63834164 | MS.gene70635:intron | 30.0% | |
| GACAAAGAACTATAAGCAAA+AGG | - | chr3.1:63833798-63833817 | None:intergenic | 30.0% | |
| GAGAAAATAGATCTCATGAA+AGG | - | chr3.1:63831900-63831919 | None:intergenic | 30.0% | |
| TACATTATCTTTCTTGACAG+GGG | + | chr3.1:63833593-63833612 | MS.gene70635:intron | 30.0% | |
| TACTCACACAATTAAAGCTA+TGG | + | chr3.1:63832429-63832448 | MS.gene70635:CDS | 30.0% | |
| TATTGAAGTAGATGTTGAAG+AGG | - | chr3.1:63831847-63831866 | None:intergenic | 30.0% | |
| TCAATGTTTGTGTAACTGTA+TGG | - | chr3.1:63832218-63832237 | None:intergenic | 30.0% | |
| TCTGTTAGAAATCGAAACAA+TGG | - | chr3.1:63832968-63832987 | None:intergenic | 30.0% | |
| TGCATTGAAAGATAAGGAAA+TGG | - | chr3.1:63834702-63834721 | None:intergenic | 30.0% | |
| TGCTTATAGTTCTTTGTCTT+TGG | + | chr3.1:63833800-63833819 | MS.gene70635:intron | 30.0% | |
| TGTTCTTGTAACCTTTATGT+GGG | + | chr3.1:63832081-63832100 | MS.gene70635:CDS | 30.0% | |
| TTCTTACATGATATTGCAGA+GGG | + | chr3.1:63834956-63834975 | MS.gene70635:CDS | 30.0% | |
| TTGTTCAAATTCTGCTATGA+TGG | + | chr3.1:63832859-63832878 | MS.gene70635:intron | 30.0% | |
| TTTCTTACATGATATTGCAG+AGG | + | chr3.1:63834955-63834974 | MS.gene70635:CDS | 30.0% | |
| ! | ATATGTCAGCATTTCTTTTC+AGG | - | chr3.1:63834815-63834834 | None:intergenic | 30.0% |
| ! | CTCGACTATAAATTTGCTTT+AGG | - | chr3.1:63834314-63834333 | None:intergenic | 30.0% |
| ! | GAGTAATAGAGTACACTTTT+AGG | + | chr3.1:63834181-63834200 | MS.gene70635:intron | 30.0% |
| ! | TATGTTTTGTGTTTTCGCAA+CGG | + | chr3.1:63831957-63831976 | MS.gene70635:intron | 30.0% |
| ! | TCTCGTTTGTTAAAGTTGAT+AGG | + | chr3.1:63833513-63833532 | MS.gene70635:intron | 30.0% |
| ! | TGTCCCTCTATTTTCTTTAA+AGG | + | chr3.1:63833725-63833744 | MS.gene70635:intron | 30.0% |
| ! | TTGTTTCTTTCAGGAATCAT+TGG | + | chr3.1:63833373-63833392 | MS.gene70635:intron | 30.0% |
| !! | GCTTTGATGGATTATTGAAT+AGG | + | chr3.1:63833172-63833191 | MS.gene70635:intron | 30.0% |
| !! | GTTCAAAAGTATTCTAACGT+CGG | - | chr3.1:63834680-63834699 | None:intergenic | 30.0% |
| !! | TTTTTCTGTTCTAGTCTTCT+AGG | + | chr3.1:63833694-63833713 | MS.gene70635:intron | 30.0% |
| !!! | TTTTTTCACCCTAAACTTTG+AGG | + | chr3.1:63834507-63834526 | MS.gene70635:intron | 30.0% |
| AGCAAATTGAACTACAGTCA+CGG | - | chr3.1:63832053-63832072 | None:intergenic | 35.0% | |
| AGGTCTGAATTTGAAAGAAG+AGG | - | chr3.1:63831690-63831709 | None:intergenic | 35.0% | |
| ATCCTATGTTACACTTAAGC+AGG | + | chr3.1:63834589-63834608 | MS.gene70635:intron | 35.0% | |
| CAACAGTGCATTGAAAGATA+AGG | - | chr3.1:63834708-63834727 | None:intergenic | 35.0% | |
| CAGATCTTACCAATTGAAAG+AGG | - | chr3.1:63833063-63833082 | None:intergenic | 35.0% | |
| CTGTTCTTGTAACCTTTATG+TGG | + | chr3.1:63832080-63832099 | MS.gene70635:CDS | 35.0% | |
| GAAAGGATGACAGAAAAGAA+AGG | - | chr3.1:63832457-63832476 | None:intergenic | 35.0% | |
| GAATGAAGAAGAAGAAGAAG+AGG | - | chr3.1:63831627-63831646 | None:intergenic | 35.0% | |
| GAATTTGAAAGAAGAGGAAG+AGG | - | chr3.1:63831684-63831703 | None:intergenic | 35.0% | |
| GACACTTAAGATGAGAATGA+GGG | - | chr3.1:63833920-63833939 | None:intergenic | 35.0% | |
| GACATATGAAGGGAAAATAG+TGG | + | chr3.1:63834828-63834847 | MS.gene70635:intron | 35.0% | |
| GCAAGAGGTAATATGATCTT+TGG | + | chr3.1:63833272-63833291 | MS.gene70635:intron | 35.0% | |
| GCTTAAGTGTAACATAGGAT+AGG | - | chr3.1:63834589-63834608 | None:intergenic | 35.0% | |
| TCCTATGTTACACTTAAGCA+GGG | + | chr3.1:63834590-63834609 | MS.gene70635:intron | 35.0% | |
| TGACACTTAAGATGAGAATG+AGG | - | chr3.1:63833921-63833940 | None:intergenic | 35.0% | |
| TGATAGGATTGTTGTATCAC+AGG | + | chr3.1:63833529-63833548 | MS.gene70635:intron | 35.0% | |
| TGGTAAAGATTGCTTCTTTC+TGG | + | chr3.1:63835082-63835101 | MS.gene70635:intron | 35.0% | |
| TGTTCTTAGCAAAAAGGTCA+TGG | + | chr3.1:63833245-63833264 | MS.gene70635:CDS | 35.0% | |
| TTACTGAAGCCTCTTTCAAT+TGG | + | chr3.1:63833051-63833070 | MS.gene70635:CDS | 35.0% | |
| TTGCTAAAAACTCTTCAGCT+TGG | + | chr3.1:63831800-63831819 | MS.gene70635:CDS | 35.0% | |
| TTTAGGCCTCTAAACATGTT+GGG | - | chr3.1:63834297-63834316 | None:intergenic | 35.0% | |
| ! | ATGTGGATTTTCCTTTTTGC+AGG | + | chr3.1:63832000-63832019 | MS.gene70635:intron | 35.0% |
| ! | CTGTGGATTGCATAAAACAA+TGG | + | chr3.1:63832760-63832779 | MS.gene70635:intron | 35.0% |
| ! | CTTTTCACCAATATGAGTCT+TGG | + | chr3.1:63832388-63832407 | MS.gene70635:CDS | 35.0% |
| ! | GTCGTTGTTGTTAGATGATT+TGG | - | chr3.1:63831579-63831598 | None:intergenic | 35.0% |
| ! | GTTGTTGTTAGATGATTTGG+CGG | - | chr3.1:63831576-63831595 | None:intergenic | 35.0% |
| ! | TAGATTTAGAGCCCACATAA+AGG | - | chr3.1:63832095-63832114 | None:intergenic | 35.0% |
| ! | TTTTAGCAACGAACTAGACT+CGG | - | chr3.1:63831789-63831808 | None:intergenic | 35.0% |
| !! | ACTGTAGTTCAATTTGCTGT+TGG | + | chr3.1:63832055-63832074 | MS.gene70635:CDS | 35.0% |
| !! | ATGAGGGCATTAGTAGAAAA+AGG | - | chr3.1:63834006-63834025 | None:intergenic | 35.0% |
| !! | TCTTTACCAAAAGCATTCAC+AGG | - | chr3.1:63835071-63835090 | None:intergenic | 35.0% |
| !! | TTCCTTTTTGCAGGTTTTGA+AGG | + | chr3.1:63832009-63832028 | MS.gene70635:intron | 35.0% |
| !!! | TCAGCATTTCTTTTCAGGTT+AGG | - | chr3.1:63834810-63834829 | None:intergenic | 35.0% |
| AAAGGTCATGGTTAAGCAAG+AGG | + | chr3.1:63833257-63833276 | MS.gene70635:CDS | 40.0% | |
| AAAGTATGCACAATAGCGAG+TGG | - | chr3.1:63832361-63832380 | None:intergenic | 40.0% | |
| AACAAATAGCGGCCATATAG+CGG | - | chr3.1:63832798-63832817 | None:intergenic | 40.0% | |
| AAGATTGTAGTGCAACATCG+AGG | - | chr3.1:63832683-63832702 | None:intergenic | 40.0% | |
| AAGCAACACTTAAATTGGGG+TGG | + | chr3.1:63834148-63834167 | MS.gene70635:intron | 40.0% | |
| AAGTTGCAAGAACCTGATAG+GGG | + | chr3.1:63833757-63833776 | MS.gene70635:intron | 40.0% | |
| ACCCTGCTTAAGTGTAACAT+AGG | - | chr3.1:63834594-63834613 | None:intergenic | 40.0% | |
| ACTCGCTATTGTGCATACTT+TGG | + | chr3.1:63832360-63832379 | MS.gene70635:CDS | 40.0% | |
| AGCCTCTTGACTAACTAAGT+TGG | + | chr3.1:63834421-63834440 | MS.gene70635:intron | 40.0% | |
| AGTAACCAATGGCATATTGC+GGG | - | chr3.1:63832534-63832553 | None:intergenic | 40.0% | |
| ATCCTTTCTGCAATGTTCCT+TGG | + | chr3.1:63832469-63832488 | MS.gene70635:CDS | 40.0% | |
| CAATATGAGTCTTGGAAAGG+TGG | + | chr3.1:63832396-63832415 | MS.gene70635:CDS | 40.0% | |
| CACCAATATGAGTCTTGGAA+AGG | + | chr3.1:63832393-63832412 | MS.gene70635:CDS | 40.0% | |
| CACCTTTCCAAGACTCATAT+TGG | - | chr3.1:63832398-63832417 | None:intergenic | 40.0% | |
| CAGTAACCAATGGCATATTG+CGG | - | chr3.1:63832535-63832554 | None:intergenic | 40.0% | |
| CTCGCTATTGTGCATACTTT+GGG | + | chr3.1:63832361-63832380 | MS.gene70635:CDS | 40.0% | |
| CTTCATTCACTCGTCAATCA+TGG | + | chr3.1:63831639-63831658 | MS.gene70635:CDS | 40.0% | |
| CTTTAGGCCTCTAAACATGT+TGG | - | chr3.1:63834298-63834317 | None:intergenic | 40.0% | |
| GAAGTTGCAAGAACCTGATA+GGG | + | chr3.1:63833756-63833775 | MS.gene70635:intron | 40.0% | |
| GCCTCTTGACTAACTAAGTT+GGG | + | chr3.1:63834422-63834441 | MS.gene70635:intron | 40.0% | |
| TACAAGAGGCCTAAAATCAC+TGG | + | chr3.1:63832115-63832134 | MS.gene70635:CDS | 40.0% | |
| TCCCAACTTAGTTAGTCAAG+AGG | - | chr3.1:63834426-63834445 | None:intergenic | 40.0% | |
| TCGCTATTGTGCATACTTTG+GGG | + | chr3.1:63832362-63832381 | MS.gene70635:CDS | 40.0% | |
| TGAAGTTGCAAGAACCTGAT+AGG | + | chr3.1:63833755-63833774 | MS.gene70635:intron | 40.0% | |
| TGCCTTCAAAACCTGCAAAA+AGG | - | chr3.1:63832014-63832033 | None:intergenic | 40.0% | |
| TGCTAAGAACATTACGTGAC+TGG | - | chr3.1:63833236-63833255 | None:intergenic | 40.0% | |
| TGGTACAATGTTGTCAACTG+TGG | + | chr3.1:63832743-63832762 | MS.gene70635:intron | 40.0% | |
| TTAGGCCTCTAAACATGTTG+GGG | - | chr3.1:63834296-63834315 | None:intergenic | 40.0% | |
| TTATCTTTCTTGACAGGGGT+TGG | + | chr3.1:63833597-63833616 | MS.gene70635:intron | 40.0% | |
| TTGCTAGACTAAACTCTAGG+TGG | + | chr3.1:63834232-63834251 | MS.gene70635:intron | 40.0% | |
| TTGGATCCTTGTTCGGTTTA+TGG | + | chr3.1:63831819-63831838 | MS.gene70635:CDS | 40.0% | |
| ! | ATAACTGTCTGCTACTTGCT+GGG | + | chr3.1:63833862-63833881 | MS.gene70635:intron | 40.0% |
| ! | ATGTGTCCTTTTCCTTCTAG+AGG | + | chr3.1:63833083-63833102 | MS.gene70635:intron | 40.0% |
| ! | CAGGTGATTTTCTGTCAAGA+TGG | - | chr3.1:63834732-63834751 | None:intergenic | 40.0% |
| ! | CGTTGCAATCCATCATTTTG+CGG | + | chr3.1:63832634-63832653 | MS.gene70635:intron | 40.0% |
| ! | TGCTTGCTAGACTAAACTCT+AGG | + | chr3.1:63834229-63834248 | MS.gene70635:intron | 40.0% |
| ! | TGGCGTTTTCTTCTACTCAA+GGG | + | chr3.1:63835199-63835218 | MS.gene70635:CDS | 40.0% |
| ! | TTTTTCCCGCAATATGCCAT+TGG | + | chr3.1:63832526-63832545 | MS.gene70635:intron | 40.0% |
| !! | CGCAAAATGATGGATTGCAA+CGG | - | chr3.1:63832636-63832655 | None:intergenic | 40.0% |
| !! | GATGGATTATTGAATAGGGC+TGG | + | chr3.1:63833177-63833196 | MS.gene70635:intron | 40.0% |
| !! | GGGCTCTAAATCTATACAAG+AGG | + | chr3.1:63832101-63832120 | MS.gene70635:CDS | 40.0% |
| !! | TCTTCTTGAATGGGAGCATT+AGG | - | chr3.1:63833304-63833323 | None:intergenic | 40.0% |
| AACGACGGCGTAAATCTCAA+TGG | + | chr3.1:63831593-63831612 | MS.gene70635:CDS | 45.0% | |
| ACATCTCCCTGTTCAAACCT+TGG | - | chr3.1:63834400-63834419 | None:intergenic | 45.0% | |
| AGACTAGGGCCTCAAAGTTT+AGG | - | chr3.1:63834519-63834538 | None:intergenic | 45.0% | |
| AGATACTCACAGCAGATTGC+AGG | - | chr3.1:63833496-63833515 | None:intergenic | 45.0% | |
| AGATCGGAAGTAGGAACAAG+AGG | - | chr3.1:63831716-63831735 | None:intergenic | 45.0% | |
| AGTGCAACTCCACCAACAAT+AGG | - | chr3.1:63833023-63833042 | None:intergenic | 45.0% | |
| AGTTCGCAACCGCAAAATGA+TGG | - | chr3.1:63832646-63832665 | None:intergenic | 45.0% | |
| ATCAAATTCTGCCGAGTCCA+AGG | + | chr3.1:63834380-63834399 | MS.gene70635:intron | 45.0% | |
| CAATTGTGTGAAGCGTGTTG+TGG | + | chr3.1:63835004-63835023 | MS.gene70635:CDS | 45.0% | |
| CTCCAAGGAACATTGCAGAA+AGG | - | chr3.1:63832474-63832493 | None:intergenic | 45.0% | |
| CTTCAGCTTGGATCCTTGTT+CGG | + | chr3.1:63831812-63831831 | MS.gene70635:CDS | 45.0% | |
| GAAAGAAGAGGAAGAGGAAG+AGG | - | chr3.1:63831678-63831697 | None:intergenic | 45.0% | |
| GAACTACAGTCACGGTTACA+GGG | - | chr3.1:63832045-63832064 | None:intergenic | 45.0% | |
| GAAGTAGGAACAAGAGGAAG+AGG | - | chr3.1:63831710-63831729 | None:intergenic | 45.0% | |
| GACTAGGGCCTCAAAGTTTA+GGG | - | chr3.1:63834518-63834537 | None:intergenic | 45.0% | |
| TGAACTACAGTCACGGTTAC+AGG | - | chr3.1:63832046-63832065 | None:intergenic | 45.0% | |
| TGTACTCTATTACTCCCTCC+AGG | - | chr3.1:63834176-63834195 | None:intergenic | 45.0% | |
| TTAGCACTCTAACCTCTCCA+AGG | - | chr3.1:63832489-63832508 | None:intergenic | 45.0% | |
| TTCTGCAATGTTCCTTGGAG+AGG | + | chr3.1:63832474-63832493 | MS.gene70635:CDS | 45.0% | |
| ! | AAAGCATTCACAGGAGAGAC+AGG | - | chr3.1:63835062-63835081 | None:intergenic | 45.0% |
| ! | AACTCACTTGCTGATACGCA+TGG | - | chr3.1:63833669-63833688 | None:intergenic | 45.0% |
| ! | ACCATGGCACCAGTGATTTT+AGG | - | chr3.1:63832127-63832146 | None:intergenic | 45.0% |
| ! | ATTTTGCGGTTGCGAACTCA+AGG | + | chr3.1:63832648-63832667 | MS.gene70635:intron | 45.0% |
| ! | CATAACTGTCTGCTACTTGC+TGG | + | chr3.1:63833861-63833880 | MS.gene70635:intron | 45.0% |
| ! | CCACTACCTCTAGAAGGAAA+AGG | - | chr3.1:63833092-63833111 | None:intergenic | 45.0% |
| ! | CTGGCGTTTTCTTCTACTCA+AGG | + | chr3.1:63835198-63835217 | MS.gene70635:CDS | 45.0% |
| ! | GAGGTACCATAAACCGAACA+AGG | - | chr3.1:63831828-63831847 | None:intergenic | 45.0% |
| ! | GTCTCTCCTGTGAATGCTTT+TGG | + | chr3.1:63835062-63835081 | MS.gene70635:CDS | 45.0% |
| ! | GTTGTTAGATGATTTGGCGG+CGG | - | chr3.1:63831573-63831592 | None:intergenic | 45.0% |
| ! | TATTGTTGGTGGAGTTGCAC+TGG | + | chr3.1:63833022-63833041 | MS.gene70635:CDS | 45.0% |
| ! | TTGCTGCTCAATGCATTGAC+TGG | + | chr3.1:63834206-63834225 | MS.gene70635:intron | 45.0% |
| !! | AAACTTTGAGGCCCTAGTCT+GGG | + | chr3.1:63834519-63834538 | MS.gene70635:intron | 45.0% |
| !! | ACGTGACTGGTTTGTCACAT+TGG | - | chr3.1:63833223-63833242 | None:intergenic | 45.0% |
| !! | CCTTTTCCTTCTAGAGGTAG+TGG | + | chr3.1:63833089-63833108 | MS.gene70635:intron | 45.0% |
| !! | CTTCTAGAGGTAGTGGAGAA+GGG | + | chr3.1:63833096-63833115 | MS.gene70635:intron | 45.0% |
| !! | TAAACTTTGAGGCCCTAGTC+TGG | + | chr3.1:63834518-63834537 | MS.gene70635:intron | 45.0% |
| !! | TTTTCTGTGAATGGGCTTGC+AGG | + | chr3.1:63834932-63834951 | MS.gene70635:intron | 45.0% |
| AACGCCAGCAAGAGCTATAG+CGG | - | chr3.1:63835186-63835205 | None:intergenic | 50.0% | |
| ACAGCAGATTGCAGGTAAGC+AGG | - | chr3.1:63833488-63833507 | None:intergenic | 50.0% | |
| ACCCTCCATGAAGATAGCTG+CGG | - | chr3.1:63833453-63833472 | None:intergenic | 50.0% | |
| ACGAGTGAACCAATCACCCA+GGG | - | chr3.1:63832999-63833018 | None:intergenic | 50.0% | |
| ACGCTTCACACAATTGCCGA+CGG | - | chr3.1:63835000-63835019 | None:intergenic | 50.0% | |
| ACTTAAATTGGGGTGGAGCC+TGG | + | chr3.1:63834155-63834174 | MS.gene70635:intron | 50.0% | |
| AGAGGAAGAGGAAGGAGACA+TGG | - | chr3.1:63831666-63831685 | None:intergenic | 50.0% | |
| AGCAGATTGCAGGTAAGCAG+GGG | - | chr3.1:63833486-63833505 | None:intergenic | 50.0% | |
| AGTGGAGAAGGGATATGGCA+TGG | + | chr3.1:63833107-63833126 | MS.gene70635:intron | 50.0% | |
| CACACAATTGCCGACGGAAT+GGG | - | chr3.1:63834994-63835013 | None:intergenic | 50.0% | |
| CAGCAGATTGCAGGTAAGCA+GGG | - | chr3.1:63833487-63833506 | None:intergenic | 50.0% | |
| CCCTGTTCAAACCTTGGACT+CGG | - | chr3.1:63834394-63834413 | None:intergenic | 50.0% | |
| CCGAGTCCAAGGTTTGAACA+GGG | + | chr3.1:63834391-63834410 | MS.gene70635:intron | 50.0% | |
| CCTTCTCCACTACCTCTAGA+AGG | - | chr3.1:63833098-63833117 | None:intergenic | 50.0% | |
| GAAGAGGAAGAGGAAGAGGA+AGG | - | chr3.1:63831674-63831693 | None:intergenic | 50.0% | |
| GAGTGCAGCAAGAAGAGATC+TGG | - | chr3.1:63833641-63833660 | None:intergenic | 50.0% | |
| GGAGGAGAAAGATCGGAAGT+AGG | - | chr3.1:63831725-63831744 | None:intergenic | 50.0% | |
| GGCTTGAGGAGGAGAAAGAT+CGG | - | chr3.1:63831732-63831751 | None:intergenic | 50.0% | |
| GGTTCACTCGTGCCTATTGT+TGG | + | chr3.1:63833008-63833027 | MS.gene70635:CDS | 50.0% | |
| TAGCAACGAACTAGACTCGG+CGG | - | chr3.1:63831786-63831805 | None:intergenic | 50.0% | |
| TCACACAATTGCCGACGGAA+TGG | - | chr3.1:63834995-63835014 | None:intergenic | 50.0% | |
| TCACTCGTGCCTATTGTTGG+TGG | + | chr3.1:63833011-63833030 | MS.gene70635:CDS | 50.0% | |
| TTGCAAGAACCTGATAGGGG+AGG | + | chr3.1:63833760-63833779 | MS.gene70635:intron | 50.0% | |
| ! | GCCTAAAATCACTGGTGCCA+TGG | + | chr3.1:63832123-63832142 | MS.gene70635:CDS | 50.0% |
| ! | GCTGCATGTTTCTGACAGTG+TGG | + | chr3.1:63834620-63834639 | MS.gene70635:intron | 50.0% |
| !! | CCTTCTAGAGGTAGTGGAGA+AGG | + | chr3.1:63833095-63833114 | MS.gene70635:intron | 50.0% |
| !! | GAGGTAGTGGAGAAGGGATA+TGG | + | chr3.1:63833102-63833121 | MS.gene70635:intron | 50.0% |
| !! | GGTTAAGGGAGCGTCTGAAA+CGG | - | chr3.1:63831541-63831560 | None:intergenic | 50.0% |
| !! | GTTGATTAGCCTCCCCTATC+AGG | - | chr3.1:63833772-63833791 | None:intergenic | 50.0% |
| AAATTGGGGTGGAGCCTGGA+GGG | + | chr3.1:63834159-63834178 | MS.gene70635:intron | 55.0% | |
| AGAGCCAAGTAGCCCAGACT+AGG | - | chr3.1:63834534-63834553 | None:intergenic | 55.0% | |
| AGCTCCCGCAGCTATCTTCA+TGG | + | chr3.1:63833445-63833464 | MS.gene70635:CDS | 55.0% | |
| CACGAGTGAACCAATCACCC+AGG | - | chr3.1:63833000-63833019 | None:intergenic | 55.0% | |
| CCCGCAGCTATCTTCATGGA+GGG | + | chr3.1:63833449-63833468 | MS.gene70635:CDS | 55.0% | |
| CCCTCCATGAAGATAGCTGC+GGG | - | chr3.1:63833452-63833471 | None:intergenic | 55.0% | |
| CTAACAGAGGCCTACACCCT+GGG | + | chr3.1:63832980-63832999 | MS.gene70635:intron | 55.0% | |
| GAACCAATCACCCAGGGTGT+AGG | - | chr3.1:63832993-63833012 | None:intergenic | 55.0% | |
| GAGCCAAGTAGCCCAGACTA+GGG | - | chr3.1:63834533-63834552 | None:intergenic | 55.0% | |
| GCCGAGTCCAAGGTTTGAAC+AGG | + | chr3.1:63834390-63834409 | MS.gene70635:intron | 55.0% | |
| GGCTGGATTTGCGAGTGCAA+TGG | + | chr3.1:63833194-63833213 | MS.gene70635:CDS | 55.0% | |
| GGTACCGCTATAGCTCTTGC+TGG | + | chr3.1:63835179-63835198 | MS.gene70635:intron | 55.0% | |
| GGTCGCCCCAACATGTTTAG+AGG | + | chr3.1:63834288-63834307 | MS.gene70635:intron | 55.0% | |
| TAAATTGGGGTGGAGCCTGG+AGG | + | chr3.1:63834158-63834177 | MS.gene70635:intron | 55.0% | |
| TCCCCTGTTACCCATTCCGT+CGG | + | chr3.1:63834981-63835000 | MS.gene70635:CDS | 55.0% | |
| TCCCGCAGCTATCTTCATGG+AGG | + | chr3.1:63833448-63833467 | MS.gene70635:CDS | 55.0% | |
| TCTAACAGAGGCCTACACCC+TGG | + | chr3.1:63832979-63832998 | MS.gene70635:intron | 55.0% | |
| TGCCGACGGAATGGGTAACA+GGG | - | chr3.1:63834986-63835005 | None:intergenic | 55.0% | |
| TTGCCGACGGAATGGGTAAC+AGG | - | chr3.1:63834987-63835006 | None:intergenic | 55.0% | |
| ! | ATGATTTGGCGGCGGAGAGA+CGG | - | chr3.1:63831565-63831584 | None:intergenic | 55.0% |
| ! | GTCTGGGCTACTTGGCTCTT+CGG | + | chr3.1:63834535-63834554 | MS.gene70635:intron | 55.0% |
| !! | AAGGGAGCGTCTGAAACGGT+TGG | - | chr3.1:63831537-63831556 | None:intergenic | 55.0% |
| !! | AGGGAGCGTCTGAAACGGTT+GGG | - | chr3.1:63831536-63831555 | None:intergenic | 55.0% |
| !! | TGAAACGGTTGGGGTTGGTG+TGG | - | chr3.1:63831526-63831545 | None:intergenic | 55.0% |
| AGGCCCTAGTCTGGGCTACT+TGG | + | chr3.1:63834527-63834546 | MS.gene70635:intron | 60.0% | |
| AGGCCTACACCCTGGGTGAT+TGG | + | chr3.1:63832987-63833006 | MS.gene70635:CDS | 60.0% | |
| AGGGGAGAGAGTGAAGGCTG+TGG | - | chr3.1:63831492-63831511 | None:intergenic | 60.0% | |
| CAACGAACTAGACTCGGCGG+CGG | - | chr3.1:63831783-63831802 | None:intergenic | 60.0% | |
| GAGGGTAGGGGAGAGAGTGA+AGG | - | chr3.1:63831498-63831517 | None:intergenic | 60.0% | |
| GCCGACGGAATGGGTAACAG+GGG | - | chr3.1:63834985-63835004 | None:intergenic | 60.0% | |
| GGCGGAGAGACGGAGGTTAA+GGG | - | chr3.1:63831555-63831574 | None:intergenic | 60.0% | |
| TGGTGTGGAGAGGGAGGGTA+GGG | - | chr3.1:63831511-63831530 | None:intergenic | 60.0% | |
| TTGGTGTGGAGAGGGAGGGT+AGG | - | chr3.1:63831512-63831531 | None:intergenic | 60.0% | |
| ! | GCGTCTGAAACGGTTGGGGT+TGG | - | chr3.1:63831531-63831550 | None:intergenic | 60.0% |
| !! | GGGAGCGTCTGAAACGGTTG+GGG | - | chr3.1:63831535-63831554 | None:intergenic | 60.0% |
| !! | GGTTGGGGTTGGTGTGGAGA+GGG | - | chr3.1:63831520-63831539 | None:intergenic | 60.0% |
| AGCGCTTTCGGGGACGGAAG+TGG | - | chr3.1:63831753-63831772 | None:intergenic | 65.0% | |
| ATTTGGCGGCGGAGAGACGG+AGG | - | chr3.1:63831562-63831581 | None:intergenic | 65.0% | |
| CGGAGTCACCAGCGCTTTCG+GGG | - | chr3.1:63831763-63831782 | None:intergenic | 65.0% | |
| CGGCGGAGAGACGGAGGTTA+AGG | - | chr3.1:63831556-63831575 | None:intergenic | 65.0% | |
| GCGGAGTCACCAGCGCTTTC+GGG | - | chr3.1:63831764-63831783 | None:intergenic | 65.0% | |
| GGCGGAGTCACCAGCGCTTT+CGG | - | chr3.1:63831765-63831784 | None:intergenic | 65.0% | |
| GGGACGGAAGTGGCTTGAGG+AGG | - | chr3.1:63831743-63831762 | None:intergenic | 65.0% | |
| GGTGTGGAGAGGGAGGGTAG+GGG | - | chr3.1:63831510-63831529 | None:intergenic | 65.0% | |
| GTCACCAGCGCTTTCGGGGA+CGG | - | chr3.1:63831759-63831778 | None:intergenic | 65.0% | |
| TCGGGGACGGAAGTGGCTTG+AGG | - | chr3.1:63831746-63831765 | None:intergenic | 65.0% | |
| ! | ACTTCCGTCCCCGAAAGCGC+TGG | + | chr3.1:63831752-63831771 | MS.gene70635:CDS | 65.0% |
| !! | CGGTTGGGGTTGGTGTGGAG+AGG | - | chr3.1:63831521-63831540 | None:intergenic | 65.0% |
| !! | GGGGTTGGTGTGGAGAGGGA+GGG | - | chr3.1:63831516-63831535 | None:intergenic | 65.0% |
| !! | TGGGGTTGGTGTGGAGAGGG+AGG | - | chr3.1:63831517-63831536 | None:intergenic | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.1 | gene | 63831482 | 63835256 | 63831482 | ID=MS.gene70635 |
| chr3.1 | mRNA | 63831482 | 63835256 | 63831482 | ID=MS.gene70635.t1;Parent=MS.gene70635 |
| chr3.1 | exon | 63831482 | 63831880 | 63831482 | ID=MS.gene70635.t1.exon1;Parent=MS.gene70635.t1 |
| chr3.1 | CDS | 63831482 | 63831880 | 63831482 | ID=cds.MS.gene70635.t1;Parent=MS.gene70635.t1 |
| chr3.1 | exon | 63832022 | 63832144 | 63832022 | ID=MS.gene70635.t1.exon2;Parent=MS.gene70635.t1 |
| chr3.1 | CDS | 63832022 | 63832144 | 63832022 | ID=cds.MS.gene70635.t1;Parent=MS.gene70635.t1 |
| chr3.1 | exon | 63832343 | 63832495 | 63832343 | ID=MS.gene70635.t1.exon3;Parent=MS.gene70635.t1 |
| chr3.1 | CDS | 63832343 | 63832495 | 63832343 | ID=cds.MS.gene70635.t1;Parent=MS.gene70635.t1 |
| chr3.1 | exon | 63832987 | 63833072 | 63832987 | ID=MS.gene70635.t1.exon4;Parent=MS.gene70635.t1 |
| chr3.1 | CDS | 63832987 | 63833072 | 63832987 | ID=cds.MS.gene70635.t1;Parent=MS.gene70635.t1 |
| chr3.1 | exon | 63833194 | 63833278 | 63833194 | ID=MS.gene70635.t1.exon5;Parent=MS.gene70635.t1 |
| chr3.1 | CDS | 63833194 | 63833278 | 63833194 | ID=cds.MS.gene70635.t1;Parent=MS.gene70635.t1 |
| chr3.1 | exon | 63833386 | 63833505 | 63833386 | ID=MS.gene70635.t1.exon6;Parent=MS.gene70635.t1 |
| chr3.1 | CDS | 63833386 | 63833505 | 63833386 | ID=cds.MS.gene70635.t1;Parent=MS.gene70635.t1 |
| chr3.1 | exon | 63833613 | 63833681 | 63833613 | ID=MS.gene70635.t1.exon7;Parent=MS.gene70635.t1 |
| chr3.1 | CDS | 63833613 | 63833681 | 63833613 | ID=cds.MS.gene70635.t1;Parent=MS.gene70635.t1 |
| chr3.1 | exon | 63834954 | 63835083 | 63834954 | ID=MS.gene70635.t1.exon8;Parent=MS.gene70635.t1 |
| chr3.1 | CDS | 63834954 | 63835083 | 63834954 | ID=cds.MS.gene70635.t1;Parent=MS.gene70635.t1 |
| chr3.1 | exon | 63835180 | 63835256 | 63835180 | ID=MS.gene70635.t1.exon9;Parent=MS.gene70635.t1 |
| chr3.1 | CDS | 63835180 | 63835256 | 63835180 | ID=cds.MS.gene70635.t1;Parent=MS.gene70635.t1 |
| Gene Sequence |
| Protein sequence |
