Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70704.t1 | XP_013460986.1 | 99.3 | 409 | 3 | 0 | 1 | 409 | 1 | 409 | 3.70E-234 | 820.5 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70704.t1 | Q9LY87 | 73.5 | 362 | 84 | 5 | 57 | 409 | 84 | 442 | 1.3e-147 | 524.2 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70704.t1 | A0A072VA09 | 99.3 | 409 | 3 | 0 | 1 | 409 | 1 | 409 | 2.7e-234 | 820.5 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene058535 | MS.gene70704 | 0.819935 | 8.94E-53 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70704.t1 | MTR_3g075530 | 99.024 | 410 | 4 | 0 | 1 | 410 | 1 | 410 | 0.0 | 849 |
| MS.gene70704.t1 | MTR_8g089670 | 63.341 | 431 | 130 | 6 | 1 | 410 | 27 | 450 | 0.0 | 527 |
| MS.gene70704.t1 | MTR_3g086520 | 67.089 | 395 | 112 | 6 | 22 | 410 | 60 | 442 | 0.0 | 518 |
| MS.gene70704.t1 | MTR_3g086520 | 67.089 | 395 | 112 | 6 | 22 | 410 | 63 | 445 | 0.0 | 517 |
| MS.gene70704.t1 | MTR_3g086520 | 67.089 | 395 | 112 | 6 | 22 | 410 | 63 | 445 | 0.0 | 517 |
| MS.gene70704.t1 | MTR_6g021730 | 64.394 | 396 | 114 | 4 | 41 | 410 | 67 | 461 | 0.0 | 513 |
| MS.gene70704.t1 | MTR_7g033100 | 60.185 | 432 | 138 | 7 | 1 | 410 | 1 | 420 | 6.52e-174 | 494 |
| MS.gene70704.t1 | MTR_7g033100 | 58.981 | 412 | 135 | 7 | 1 | 390 | 1 | 400 | 1.06e-158 | 454 |
| MS.gene70704.t1 | MTR_3g096520 | 60.556 | 360 | 123 | 3 | 66 | 421 | 79 | 423 | 8.05e-155 | 445 |
| MS.gene70704.t1 | MTR_3g096520 | 60.556 | 360 | 123 | 3 | 66 | 421 | 96 | 440 | 2.24e-154 | 444 |
| MS.gene70704.t1 | MTR_3g096520 | 60.000 | 360 | 124 | 3 | 66 | 421 | 79 | 422 | 8.76e-154 | 442 |
| MS.gene70704.t1 | MTR_2g063857 | 59.066 | 364 | 127 | 4 | 59 | 421 | 59 | 401 | 9.10e-149 | 429 |
| MS.gene70704.t1 | MTR_6g092020 | 56.085 | 378 | 141 | 5 | 45 | 421 | 27 | 380 | 1.37e-143 | 415 |
| MS.gene70704.t1 | MTR_2g063843 | 55.065 | 385 | 128 | 7 | 45 | 421 | 40 | 387 | 4.64e-141 | 409 |
| MS.gene70704.t1 | MTR_2g063907 | 58.239 | 352 | 114 | 4 | 62 | 408 | 48 | 371 | 2.15e-139 | 405 |
| MS.gene70704.t1 | MTR_2g063857 | 65.517 | 290 | 99 | 1 | 59 | 348 | 59 | 347 | 4.02e-137 | 398 |
| MS.gene70704.t1 | MTR_8g447220 | 53.023 | 430 | 154 | 11 | 1 | 421 | 1 | 391 | 8.29e-136 | 395 |
| MS.gene70704.t1 | MTR_6g092100 | 65.480 | 281 | 94 | 2 | 68 | 348 | 2 | 279 | 1.26e-131 | 381 |
| MS.gene70704.t1 | MTR_8g447220 | 58.333 | 336 | 117 | 4 | 1 | 332 | 1 | 317 | 1.79e-126 | 369 |
| MS.gene70704.t1 | MTR_7g081160 | 61.847 | 249 | 90 | 3 | 88 | 332 | 7 | 254 | 1.43e-95 | 296 |
| MS.gene70704.t1 | MTR_7g081170 | 69.375 | 160 | 45 | 2 | 127 | 285 | 86 | 242 | 5.04e-76 | 237 |
| MS.gene70704.t1 | MTR_5g094020 | 69.565 | 92 | 20 | 1 | 324 | 415 | 2 | 85 | 4.78e-35 | 125 |
| MS.gene70704.t1 | MTR_2g063877 | 52.727 | 110 | 39 | 3 | 148 | 257 | 4 | 100 | 2.28e-29 | 112 |
| MS.gene70704.t1 | MTR_8g096190 | 33.219 | 292 | 148 | 11 | 55 | 326 | 306 | 570 | 1.48e-24 | 106 |
| MS.gene70704.t1 | MTR_8g096190 | 34.340 | 265 | 134 | 10 | 55 | 299 | 306 | 550 | 1.24e-23 | 103 |
| MS.gene70704.t1 | MTR_8g096190 | 35.897 | 234 | 119 | 9 | 55 | 277 | 306 | 519 | 2.50e-23 | 102 |
| MS.gene70704.t1 | MTR_1g048160 | 29.730 | 259 | 138 | 8 | 88 | 326 | 328 | 562 | 3.68e-20 | 93.2 |
| MS.gene70704.t1 | MTR_7g114130 | 29.286 | 280 | 149 | 10 | 87 | 346 | 331 | 581 | 4.37e-20 | 93.2 |
| MS.gene70704.t1 | MTR_7g114100 | 30.350 | 257 | 128 | 12 | 88 | 322 | 166 | 393 | 4.97e-18 | 85.9 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70704.t1 | AT5G14420 | 72.922 | 373 | 84 | 6 | 47 | 410 | 79 | 443 | 0.0 | 537 |
| MS.gene70704.t1 | AT5G14420 | 72.922 | 373 | 84 | 6 | 47 | 410 | 79 | 443 | 0.0 | 537 |
| MS.gene70704.t1 | AT5G14420 | 72.922 | 373 | 84 | 6 | 47 | 410 | 79 | 443 | 0.0 | 537 |
| MS.gene70704.t1 | AT5G14420 | 72.922 | 373 | 84 | 6 | 47 | 410 | 79 | 443 | 0.0 | 537 |
| MS.gene70704.t1 | AT3G01650 | 70.137 | 365 | 96 | 4 | 46 | 410 | 113 | 464 | 5.79e-180 | 511 |
| MS.gene70704.t1 | AT3G01650 | 70.137 | 365 | 96 | 4 | 46 | 410 | 113 | 464 | 5.79e-180 | 511 |
| MS.gene70704.t1 | AT1G67800 | 61.882 | 425 | 130 | 7 | 1 | 410 | 1 | 408 | 3.37e-176 | 499 |
| MS.gene70704.t1 | AT1G67800 | 61.882 | 425 | 130 | 7 | 1 | 410 | 1 | 408 | 3.37e-176 | 499 |
| MS.gene70704.t1 | AT1G67800 | 61.882 | 425 | 130 | 7 | 1 | 410 | 1 | 408 | 3.37e-176 | 499 |
| MS.gene70704.t1 | AT1G67800 | 61.882 | 425 | 130 | 7 | 1 | 410 | 1 | 408 | 3.37e-176 | 499 |
| MS.gene70704.t1 | AT1G67800 | 61.882 | 425 | 130 | 7 | 1 | 410 | 21 | 428 | 7.07e-176 | 499 |
| MS.gene70704.t1 | AT1G67800 | 61.787 | 403 | 124 | 6 | 1 | 390 | 21 | 406 | 1.23e-164 | 469 |
| MS.gene70704.t1 | AT5G63970 | 58.840 | 362 | 138 | 3 | 62 | 423 | 4 | 354 | 2.36e-145 | 418 |
| MS.gene70704.t1 | AT5G63970 | 58.840 | 362 | 138 | 3 | 62 | 423 | 4 | 354 | 2.36e-145 | 418 |
| MS.gene70704.t1 | AT1G79380 | 53.699 | 365 | 146 | 3 | 59 | 421 | 43 | 386 | 6.95e-136 | 395 |
| MS.gene70704.t1 | AT1G24545 | 51.376 | 109 | 15 | 1 | 110 | 218 | 46 | 116 | 3.56e-26 | 104 |
| MS.gene70704.t1 | AT5G07300 | 30.841 | 321 | 156 | 16 | 39 | 335 | 297 | 575 | 7.29e-21 | 95.5 |
| MS.gene70704.t1 | AT5G61910 | 30.827 | 266 | 136 | 12 | 84 | 328 | 1100 | 1338 | 2.71e-19 | 91.3 |
| MS.gene70704.t1 | AT5G61900 | 31.559 | 263 | 138 | 11 | 84 | 328 | 332 | 570 | 1.83e-18 | 88.2 |
| MS.gene70704.t1 | AT5G61900 | 31.559 | 263 | 138 | 11 | 84 | 328 | 332 | 570 | 1.83e-18 | 88.2 |
| MS.gene70704.t1 | AT1G08860 | 32.161 | 199 | 110 | 6 | 88 | 277 | 338 | 520 | 1.04e-17 | 85.9 |
Find 120 sgRNAs with CRISPR-Local
Find 247 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| GTTTGCACTTTCTGCCTTAA+TGG | 0.161611 | 3.3:-65185185 | MS.gene70704:CDS |
| CAAGATCATGGGTATAATTA+TGG | 0.172281 | 3.3:-65187963 | MS.gene70704:CDS |
| TTGATTCCCTGCTTTGGATT+TGG | 0.265798 | 3.3:-65187003 | MS.gene70704:CDS |
| GGGAATTGGTCCCTCAATTA+AGG | 0.290966 | 3.3:-65186797 | MS.gene70704:CDS |
| ACACTAGAACTTAGTATATT+GGG | 0.298980 | 3.3:-65185139 | MS.gene70704:CDS |
| AACACTAGAACTTAGTATAT+TGG | 0.302323 | 3.3:-65185140 | MS.gene70704:CDS |
| GTCCCTCAATTAAGGCTTGC+AGG | 0.314298 | 3.3:-65186789 | MS.gene70704:intron |
| AGGAAGTGCTGTCACGGTAT+AGG | 0.333904 | 3.3:-65186818 | MS.gene70704:CDS |
| ATGGATATAGCTTGTTCATA+TGG | 0.335470 | 3.3:+65187063 | None:intergenic |
| ATAGCTTGTTCATATGGATT+TGG | 0.337346 | 3.3:+65187069 | None:intergenic |
| CAACCAAAGGCCATGTCCTT+TGG | 0.340444 | 3.3:+65184622 | None:intergenic |
| GGAAGTGCTGTCACGGTATA+GGG | 0.350445 | 3.3:-65186817 | MS.gene70704:CDS |
| CCTCTACCGCCACCTCAATA+TGG | 0.355560 | 3.3:-65184997 | MS.gene70704:CDS |
| CTCCGACTAACACGATTGAT+AGG | 0.359031 | 3.3:+65185644 | None:intergenic |
| CAAACAGCAATCGTAGTAGA+AGG | 0.370156 | 3.3:-65185038 | MS.gene70704:intron |
| TGAGTTTGTTGTGGCAAATA+AGG | 0.372825 | 3.3:+65187984 | None:intergenic |
| AAGATCATGGGTATAATTAT+GGG | 0.373500 | 3.3:-65187962 | MS.gene70704:CDS |
| GGCCTTTGGTTGCGGACATC+AGG | 0.383961 | 3.3:-65184611 | MS.gene70704:CDS |
| GATAACTTGATTCCCTGCTT+TGG | 0.393441 | 3.3:-65187009 | MS.gene70704:CDS |
| AATCCAAAGGACATGGCCTT+TGG | 0.399769 | 3.3:-65184625 | MS.gene70704:CDS |
| GAACAAGCTATATCCATCAT+TGG | 0.402218 | 3.3:-65187057 | MS.gene70704:CDS |
| AAGTTCTGCTTCTGATAATC+AGG | 0.402745 | 3.3:-65184878 | MS.gene70704:intron |
| GTTCTAGTGTTGCCTTGTAC+TGG | 0.417106 | 3.3:+65185152 | None:intergenic |
| TCTGTAGTTTGTGAATTTCA+CGG | 0.432671 | 3.3:-65185251 | MS.gene70704:intron |
| CCATATTGAGGTGGCGGTAG+AGG | 0.433347 | 3.3:+65184997 | None:intergenic |
| AGTGTTGCCTTGTACTGGTC+AGG | 0.437247 | 3.3:+65185157 | None:intergenic |
| GCTGTCACGGTATAGGGAAT+TGG | 0.442286 | 3.3:-65186811 | MS.gene70704:CDS |
| GTGATTGCCATCTCAATGAT+TGG | 0.451178 | 3.3:+65186660 | None:intergenic |
| AAGGACATGGCCTTTGGTTG+CGG | 0.452397 | 3.3:-65184619 | MS.gene70704:CDS |
| CTTTGGATTAGTGAGGCAAA+TGG | 0.455958 | 3.3:+65184639 | None:intergenic |
| TTGGTTGCGGACATCAGGTT+AGG | 0.461767 | 3.3:-65184606 | MS.gene70704:CDS |
| TAATCAATAAAACATGGTAT+TGG | 0.462373 | 3.3:+65186616 | None:intergenic |
| CTGGTCAGGTATTTCCATTA+AGG | 0.465741 | 3.3:+65185171 | None:intergenic |
| AACAAGCTATATCCATCATT+GGG | 0.467106 | 3.3:-65187056 | MS.gene70704:CDS |
| CGATTATAATAGCTTGGAAC+AGG | 0.471695 | 3.3:-65187850 | MS.gene70704:intron |
| AAATAAGGTGATTGATATTG+AGG | 0.472323 | 3.3:+65187999 | None:intergenic |
| GAGTCTTCTAATCTCATTGT+TGG | 0.475677 | 3.3:-65187262 | MS.gene70704:CDS |
| AGAAGTGTTGACATTGATCA+TGG | 0.476712 | 3.3:-65185814 | MS.gene70704:CDS |
| CCCTGCTTTGGATTTGGAGA+TGG | 0.478032 | 3.3:-65186997 | MS.gene70704:intron |
| TCGGAGTTGGAGACGGGCCA+TGG | 0.479810 | 3.3:-65185627 | MS.gene70704:CDS |
| ATTCAAAACGGAGGGGCTCT+AGG | 0.483859 | 3.3:-65188058 | MS.gene70704:CDS |
| GGAGATGCCTGCATGACATC+GGG | 0.485131 | 3.3:-65187098 | MS.gene70704:CDS |
| CCACAACAAACTCAAGATCA+TGG | 0.488605 | 3.3:-65187975 | MS.gene70704:CDS |
| TGATTGCCATCTCAATGATT+GGG | 0.493683 | 3.3:+65186661 | None:intergenic |
| ACCATCTCCAAATCCAAAGC+AGG | 0.494526 | 3.3:+65186996 | None:intergenic |
| ACAAAGAGCAATGAATGGAC+AGG | 0.496289 | 3.3:-65187229 | MS.gene70704:intron |
| TTTGGATTAGTGAGGCAAAT+GGG | 0.497200 | 3.3:+65184640 | None:intergenic |
| TATCAGAAGCAGAACTTGCA+TGG | 0.497272 | 3.3:+65184884 | None:intergenic |
| TGTTTCTGAGATGGTGCACT+GGG | 0.504563 | 3.3:+65184925 | None:intergenic |
| GAACATGGATCGGTCTAGAA+AGG | 0.513599 | 3.3:-65185215 | MS.gene70704:CDS |
| CCTTCGTATTATTAGGTGCA+AGG | 0.515001 | 3.3:-65187131 | MS.gene70704:intron |
| GTGTTTCTGAGATGGTGCAC+TGG | 0.522595 | 3.3:+65184924 | None:intergenic |
| TAGAAGCTATTGTGAAAGCT+AGG | 0.523251 | 3.3:-65185762 | MS.gene70704:intron |
| ACTGAGGCTCTAGCGAGTGC+TGG | 0.528317 | 3.3:-65187289 | MS.gene70704:CDS |
| TCCGACTAACACGATTGATA+GGG | 0.532859 | 3.3:+65185645 | None:intergenic |
| GCCTTCACTTTGCTCAACAA+TGG | 0.536111 | 3.3:+65186638 | None:intergenic |
| GTTCATGCCCGATGTCATGC+AGG | 0.538532 | 3.3:+65187091 | None:intergenic |
| ATCAGAAGCAGAACTTGCAT+GGG | 0.538923 | 3.3:+65184885 | None:intergenic |
| TAGGTGCAAGGTCGTTTCAA+AGG | 0.540109 | 3.3:-65187119 | MS.gene70704:CDS |
| TACCTGCAAGCCTTAATTGA+GGG | 0.540865 | 3.3:+65186787 | None:intergenic |
| ATTGATTATAGCAGATGGGC+AGG | 0.543503 | 3.3:-65186601 | MS.gene70704:intron |
| TGTTAGTCGGAGTTGGAGAC+GGG | 0.547110 | 3.3:-65185633 | MS.gene70704:CDS |
| AAATTATCAAATGCTCGTGC+AGG | 0.552178 | 3.3:+65185574 | None:intergenic |
| CCCCTATCAATCGTGTTAGT+CGG | 0.556894 | 3.3:-65185646 | MS.gene70704:CDS |
| GCTCAAAGCTATGGTGGTGT+TGG | 0.558744 | 3.3:-65187927 | MS.gene70704:CDS |
| GGCAGCATCAACACATGACC+AGG | 0.559053 | 3.3:-65186886 | MS.gene70704:intron |
| ACACCACCATAGCTTTGAGC+TGG | 0.560332 | 3.3:+65187930 | None:intergenic |
| ATTTGCCCCAATCATTGAGA+TGG | 0.560513 | 3.3:-65186667 | MS.gene70704:CDS |
| AGGAGATGCCTGCATGACAT+CGG | 0.561279 | 3.3:-65187099 | MS.gene70704:CDS |
| CCACCTCCAGCTCAAAGCTA+TGG | 0.561873 | 3.3:-65187936 | MS.gene70704:CDS |
| TGGATCACATTCAAAACGGA+GGG | 0.562804 | 3.3:-65188066 | MS.gene70704:CDS |
| GTGTTAGTCGGAGTTGGAGA+CGG | 0.563288 | 3.3:-65185634 | MS.gene70704:CDS |
| AACATTATCATCCTTTGATG+AGG | 0.563505 | 3.3:-65187031 | MS.gene70704:CDS |
| GATTGATATTGAGGAAACAA+AGG | 0.564823 | 3.3:+65188008 | None:intergenic |
| AACTGTTTCATCATGTCCCA+TGG | 0.564913 | 3.3:+65185610 | None:intergenic |
| CCATAGCTTTGAGCTGGAGG+TGG | 0.566424 | 3.3:+65187936 | None:intergenic |
| ATGATTGGGGCAAATGATGT+AGG | 0.568651 | 3.3:+65186675 | None:intergenic |
| GGAAATACCTGACCAGTACA+AGG | 0.568682 | 3.3:-65185164 | MS.gene70704:CDS |
| CGGAGTTGGAGACGGGCCAT+GGG | 0.571306 | 3.3:-65185626 | MS.gene70704:CDS |
| ATACCTGCAAGCCTTAATTG+AGG | 0.572097 | 3.3:+65186786 | None:intergenic |
| AATCAAGTTATCCTCATCAA+AGG | 0.573410 | 3.3:+65187020 | None:intergenic |
| AGGTGACGATTATAATAGCT+TGG | 0.574072 | 3.3:-65187856 | MS.gene70704:CDS |
| AAAGATGGTGCGCCATATTG+AGG | 0.575601 | 3.3:+65184985 | None:intergenic |
| TCAATCGTGTTAGTCGGAGT+TGG | 0.576611 | 3.3:-65185640 | MS.gene70704:CDS |
| GGTGCGCCATATTGAGGTGG+CGG | 0.578627 | 3.3:+65184991 | None:intergenic |
| CCACCATAGCTTTGAGCTGG+AGG | 0.583234 | 3.3:+65187933 | None:intergenic |
| GCGAGAACAAGTGAAGTGGC+TGG | 0.584716 | 3.3:+65184580 | None:intergenic |
| AACCTGATGTCCGCAACCAA+AGG | 0.585845 | 3.3:+65184609 | None:intergenic |
| TGGGTGGATCACATTCAAAA+CGG | 0.587543 | 3.3:-65188070 | MS.gene70704:CDS |
| GGCAACGTTCTTCATCCTCA+AGG | 0.589564 | 3.3:-65188037 | MS.gene70704:CDS |
| CTGCTATAATCAATAAAACA+TGG | 0.591905 | 3.3:+65186610 | None:intergenic |
| CCTCACTAATCCAAAGGACA+TGG | 0.593573 | 3.3:-65184632 | MS.gene70704:CDS |
| CCTCCAGCTCAAAGCTATGG+TGG | 0.594240 | 3.3:-65187933 | MS.gene70704:CDS |
| GGAAATAATGTCAAAGAACA+TGG | 0.594659 | 3.3:-65185230 | MS.gene70704:CDS |
| CACAACAAACTCAAGATCAT+GGG | 0.595326 | 3.3:-65187974 | MS.gene70704:CDS |
| ACCATTGTTGAGCAAAGTGA+AGG | 0.599368 | 3.3:-65186639 | MS.gene70704:CDS |
| CCATGATCTTGAGTTTGTTG+TGG | 0.599472 | 3.3:+65187975 | None:intergenic |
| TAATGTCAAAGAACATGGAT+CGG | 0.600427 | 3.3:-65185225 | MS.gene70704:CDS |
| CCGACTAACACGATTGATAG+GGG | 0.607843 | 3.3:+65185646 | None:intergenic |
| CCATGTCCTTTGGATTAGTG+AGG | 0.610545 | 3.3:+65184632 | None:intergenic |
| CCATCTCCAAATCCAAAGCA+GGG | 0.616817 | 3.3:+65186997 | None:intergenic |
| GATTTGAGGAAGTGCTGTCA+CGG | 0.617061 | 3.3:-65186824 | MS.gene70704:CDS |
| GAAGTGTTGACATTGATCAT+GGG | 0.625872 | 3.3:-65185813 | MS.gene70704:CDS |
| TCCATATTGAAAGGTAACTG+AGG | 0.629326 | 3.3:-65187305 | MS.gene70704:intron |
| CACTAGAACTTAGTATATTG+GGG | 0.632087 | 3.3:-65185138 | MS.gene70704:intron |
| GTAACACCGTGTTTCTGAGA+TGG | 0.632837 | 3.3:+65184916 | None:intergenic |
| AGATCATGGGTATAATTATG+GGG | 0.633547 | 3.3:-65187961 | MS.gene70704:CDS |
| GTAGAAGGAATGATATACAC+AGG | 0.636992 | 3.3:-65185023 | MS.gene70704:CDS |
| AAACAAAGGATTTGACCTTG+AGG | 0.645932 | 3.3:+65188022 | None:intergenic |
| TAGGATAAAGAAATCATGGG+TGG | 0.653785 | 3.3:-65188086 | None:intergenic |
| TCAGAAGCAGAACTTGCATG+GGG | 0.654884 | 3.3:+65184886 | None:intergenic |
| CATTTGCCTCACTAATCCAA+AGG | 0.656843 | 3.3:-65184638 | MS.gene70704:CDS |
| GTGGATCACATTCAAAACGG+AGG | 0.665184 | 3.3:-65188067 | MS.gene70704:CDS |
| GCATGCGAGAACAAGTGAAG+TGG | 0.670387 | 3.3:+65184576 | None:intergenic |
| GATGGTGCGCCATATTGAGG+TGG | 0.673589 | 3.3:+65184988 | None:intergenic |
| GATTGCCATCTCAATGATTG+GGG | 0.675274 | 3.3:+65186662 | None:intergenic |
| GGATCACATTCAAAACGGAG+GGG | 0.707784 | 3.3:-65188065 | MS.gene70704:CDS |
| CAGAAGCAGAACTTGCATGG+GGG | 0.725671 | 3.3:+65184887 | None:intergenic |
| AGTGCACCATCTCAGAAACA+CGG | 0.736607 | 3.3:-65184922 | MS.gene70704:CDS |
| GTTTCTGAGATGGTGCACTG+GGG | 0.783884 | 3.3:+65184926 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | ATTATTATTATTATTTAATA+TGG | + | chr3.3:65186258-65186277 | None:intergenic | 0.0% |
| !!! | ATATAAAATAGACTTTTTTA+GGG | - | chr3.3:65186528-65186547 | MS.gene70704:intron | 10.0% |
| !!! | AAGATTTTATTTTCTTTCAA+GGG | - | chr3.3:65186167-65186186 | MS.gene70704:intron | 15.0% |
| !!! | AATTCTTTTAATTGTTATCT+TGG | - | chr3.3:65185058-65185077 | MS.gene70704:intron | 15.0% |
| !!! | GATATAAAATAGACTTTTTT+AGG | - | chr3.3:65186527-65186546 | MS.gene70704:intron | 15.0% |
| !!! | TATAAAATAGACTTTTTTAG+GGG | - | chr3.3:65186529-65186548 | MS.gene70704:intron | 15.0% |
| !! | AAAAAAAACGTCAACTTAAA+TGG | + | chr3.3:65187568-65187587 | None:intergenic | 20.0% |
| !! | ATATCATATCAAGTAAATAG+AGG | + | chr3.3:65187280-65187299 | None:intergenic | 20.0% |
| !! | CTATTTAATATTTACTCTGA+AGG | - | chr3.3:65186572-65186591 | MS.gene70704:intron | 20.0% |
| !! | TAATCAATAAAACATGGTAT+TGG | + | chr3.3:65186019-65186038 | None:intergenic | 20.0% |
| !! | TGTTGACACAATTAAAAAAA+AGG | + | chr3.3:65185463-65185482 | None:intergenic | 20.0% |
| !! | TTGAAATCAAATAAATGAAG+TGG | - | chr3.3:65186115-65186134 | MS.gene70704:intron | 20.0% |
| !!! | AGATTTTATTTTCTTTCAAG+GGG | - | chr3.3:65186168-65186187 | MS.gene70704:intron | 20.0% |
| !!! | GAAGATTTTATTTTCTTTCA+AGG | - | chr3.3:65186166-65186185 | MS.gene70704:intron | 20.0% |
| !!! | TTTTATTGATTATAGCAGAT+GGG | - | chr3.3:65186027-65186046 | MS.gene70704:intron | 20.0% |
| !!! | TTTTTCTTTTCCATATTGAA+AGG | - | chr3.3:65185318-65185337 | MS.gene70704:intron | 20.0% |
| ! | AAATAAGGTGATTGATATTG+AGG | + | chr3.3:65184636-65184655 | None:intergenic | 25.0% |
| ! | AACACTAGAACTTAGTATAT+TGG | - | chr3.3:65187492-65187511 | MS.gene70704:intron | 25.0% |
| ! | AAGATCATGGGTATAATTAT+GGG | - | chr3.3:65184670-65184689 | MS.gene70704:intron | 25.0% |
| ! | ACACTAGAACTTAGTATATT+GGG | - | chr3.3:65187493-65187512 | MS.gene70704:intron | 25.0% |
| ! | AGAGCTTAAAGTCAAAAAAA+TGG | + | chr3.3:65184836-65184855 | None:intergenic | 25.0% |
| ! | ATAGTTCCATACAAAAACTA+TGG | + | chr3.3:65186656-65186675 | None:intergenic | 25.0% |
| ! | CTGCTATAATCAATAAAACA+TGG | + | chr3.3:65186025-65186044 | None:intergenic | 25.0% |
| ! | GACAAGAAGTTTACAAAAAT+AGG | - | chr3.3:65184756-65184775 | MS.gene70704:intron | 25.0% |
| ! | GAGCTTAAAGTCAAAAAAAT+GGG | + | chr3.3:65184835-65184854 | None:intergenic | 25.0% |
| ! | TAAAATGAATGCAACATTTG+TGG | - | chr3.3:65186280-65186299 | MS.gene70704:intron | 25.0% |
| ! | TAACTTACCTTCGTATTATT+AGG | - | chr3.3:65185494-65185513 | MS.gene70704:intron | 25.0% |
| ! | TGGCATTATCATTATAAAGA+GGG | - | chr3.3:65185078-65185097 | MS.gene70704:intron | 25.0% |
| ! | TTAGAATCTAATCTAATCTC+TGG | - | chr3.3:65185694-65185713 | MS.gene70704:intron | 25.0% |
| ! | TTCCTATACAATAAACACAA+AGG | - | chr3.3:65187299-65187318 | MS.gene70704:intron | 25.0% |
| ! | TTGGCATTATCATTATAAAG+AGG | - | chr3.3:65185077-65185096 | MS.gene70704:intron | 25.0% |
| !! | AAAGAGATACAATAACTTGT+TGG | - | chr3.3:65186336-65186355 | MS.gene70704:intron | 25.0% |
| !! | AATTAGCCATAGTTTTTGTA+TGG | - | chr3.3:65186647-65186666 | MS.gene70704:CDS | 25.0% |
| !! | ACCAAAAAGATTAGTTAAGA+GGG | - | chr3.3:65186311-65186330 | MS.gene70704:intron | 25.0% |
| !! | ATTTTACAAAGAGCAATGAA+TGG | - | chr3.3:65185398-65185417 | MS.gene70704:intron | 25.0% |
| !! | TTGAATCATTTGGAACTATT+TGG | - | chr3.3:65184885-65184904 | MS.gene70704:CDS | 25.0% |
| !! | TTTAATATGGATAAGTGTTG+AGG | + | chr3.3:65186245-65186264 | None:intergenic | 25.0% |
| !!! | AAGAGATACAATAACTTGTT+GGG | - | chr3.3:65186337-65186356 | MS.gene70704:intron | 25.0% |
| !!! | GTTTTATTGATTATAGCAGA+TGG | - | chr3.3:65186026-65186045 | MS.gene70704:intron | 25.0% |
| !!! | TATTGTTTGTTGGTTTACAT+TGG | - | chr3.3:65185725-65185744 | MS.gene70704:intron | 25.0% |
| !!! | TCGATTACTCGATTTTATTT+AGG | - | chr3.3:65187213-65187232 | MS.gene70704:intron | 25.0% |
| AAAAGGATTTGACCAATGAA+TGG | + | chr3.3:65184978-65184997 | None:intergenic | 30.0% | |
| AACAAGCTATATCCATCATT+GGG | - | chr3.3:65185576-65185595 | MS.gene70704:CDS | 30.0% | |
| AACATTATCATCCTTTGATG+AGG | - | chr3.3:65185601-65185620 | MS.gene70704:CDS | 30.0% | |
| AATCAAGTTATCCTCATCAA+AGG | + | chr3.3:65185615-65185634 | None:intergenic | 30.0% | |
| AATTTCAGCATCAACAATCT+CGG | + | chr3.3:65186201-65186220 | None:intergenic | 30.0% | |
| AGATCATGGGTATAATTATG+GGG | - | chr3.3:65184671-65184690 | MS.gene70704:intron | 30.0% | |
| ATAAAGAAAGATACGAAGTG+TGG | + | chr3.3:65185882-65185901 | None:intergenic | 30.0% | |
| ATTTGACCAATGAATGGAAA+TGG | + | chr3.3:65184972-65184991 | None:intergenic | 30.0% | |
| CAAGATCATGGGTATAATTA+TGG | - | chr3.3:65184669-65184688 | MS.gene70704:intron | 30.0% | |
| CAATAAACAGCATAAGCAAA+AGG | + | chr3.3:65185918-65185937 | None:intergenic | 30.0% | |
| CACTAGAACTTAGTATATTG+GGG | - | chr3.3:65187494-65187513 | MS.gene70704:intron | 30.0% | |
| CATTGAAACTAAAAACTTCC+TGG | + | chr3.3:65185767-65185786 | None:intergenic | 30.0% | |
| CTATCGCTAATTATTCAAAG+AGG | - | chr3.3:65184808-65184827 | MS.gene70704:intron | 30.0% | |
| CTTAAGTTTAATGGTCAATG+TGG | - | chr3.3:65186595-65186614 | MS.gene70704:intron | 30.0% | |
| GACCTTTGTGTTTATTGTAT+AGG | + | chr3.3:65187304-65187323 | None:intergenic | 30.0% | |
| GATTGATATTGAGGAAACAA+AGG | + | chr3.3:65184627-65184646 | None:intergenic | 30.0% | |
| GGAAATAATGTCAAAGAACA+TGG | - | chr3.3:65187402-65187421 | MS.gene70704:intron | 30.0% | |
| GTAGCAAAGGTAAAGAATAA+AGG | + | chr3.3:65186914-65186933 | None:intergenic | 30.0% | |
| TAAGCACATTATTGTAGCAA+AGG | + | chr3.3:65186927-65186946 | None:intergenic | 30.0% | |
| TAATGTCAAAGAACATGGAT+CGG | - | chr3.3:65187407-65187426 | MS.gene70704:intron | 30.0% | |
| TACTGTATAGTTCAAACACA+CGG | + | chr3.3:65187190-65187209 | None:intergenic | 30.0% | |
| TATTGTCCCTAATTTATTGC+AGG | - | chr3.3:65185933-65185952 | MS.gene70704:intron | 30.0% | |
| TGTAATAGAGAGAAAATGAG+AGG | - | chr3.3:65187152-65187171 | MS.gene70704:intron | 30.0% | |
| ! | ATTTTCTTTCAAGGGGTAAA+AGG | - | chr3.3:65186175-65186194 | MS.gene70704:intron | 30.0% |
| ! | GACCAAAAAGATTAGTTAAG+AGG | - | chr3.3:65186310-65186329 | MS.gene70704:intron | 30.0% |
| ! | TAGATTTTGTCATGGATTTG+AGG | - | chr3.3:65185794-65185813 | MS.gene70704:CDS | 30.0% |
| ! | TCCCTCTTAACTAATCTTTT+TGG | + | chr3.3:65186315-65186334 | None:intergenic | 30.0% |
| ! | TCTGTAGTTTGTGAATTTCA+CGG | - | chr3.3:65187381-65187400 | MS.gene70704:intron | 30.0% |
| ! | TGTGGAAACATTTTCTTTTC+TGG | - | chr3.3:65185024-65185043 | MS.gene70704:CDS | 30.0% |
| ! | TTTCAAGATGTTTCTGTAGT+TGG | - | chr3.3:65185210-65185229 | MS.gene70704:CDS | 30.0% |
| !! | ACGAGCATTTGATAATTTTC+AGG | - | chr3.3:65187063-65187082 | MS.gene70704:CDS | 30.0% |
| !! | ATAGCTTGTTCATATGGATT+TGG | + | chr3.3:65185566-65185585 | None:intergenic | 30.0% |
| !! | ATGGATATAGCTTGTTCATA+TGG | + | chr3.3:65185572-65185591 | None:intergenic | 30.0% |
| !! | ATTCATGCAGTCGTTTTAAA+AGG | + | chr3.3:65184995-65185014 | None:intergenic | 30.0% |
| !! | TATGCATACTTGCTATGTTA+CGG | - | chr3.3:65184923-65184942 | MS.gene70704:CDS | 30.0% |
| !! | TGATAATGTTTTCCCAATGA+TGG | + | chr3.3:65185591-65185610 | None:intergenic | 30.0% |
| !!! | AGTTTTTAGTTTCAATGCTG+AGG | - | chr3.3:65185770-65185789 | MS.gene70704:CDS | 30.0% |
| AAACAAAGGATTTGACCTTG+AGG | + | chr3.3:65184613-65184632 | None:intergenic | 35.0% | |
| AAAGAGAAGTCGAAATGCTA+CGG | + | chr3.3:65187826-65187845 | None:intergenic | 35.0% | |
| AAATTATCAAATGCTCGTGC+AGG | + | chr3.3:65187061-65187080 | None:intergenic | 35.0% | |
| AACCGACAACTTCTATGAAT+AGG | + | chr3.3:65187098-65187117 | None:intergenic | 35.0% | |
| AAGTAAACTTTGCAGTGACT+TGG | + | chr3.3:65187898-65187917 | None:intergenic | 35.0% | |
| AAGTTCTGCTTCTGATAATC+AGG | - | chr3.3:65187754-65187773 | MS.gene70704:intron | 35.0% | |
| AATGAATGCAACATTTGTGG+TGG | - | chr3.3:65186283-65186302 | MS.gene70704:intron | 35.0% | |
| AATTGCCCAATTAACTAACC+TGG | + | chr3.3:65186485-65186504 | None:intergenic | 35.0% | |
| AGAACTTAGTATATTGGGGT+AGG | - | chr3.3:65187498-65187517 | MS.gene70704:intron | 35.0% | |
| AGGTGACGATTATAATAGCT+TGG | - | chr3.3:65184776-65184795 | MS.gene70704:intron | 35.0% | |
| AGTTGCTCAACATGAACATT+TGG | + | chr3.3:65185185-65185204 | None:intergenic | 35.0% | |
| CACAAATAGACTTCTACATG+AGG | + | chr3.3:65187862-65187881 | None:intergenic | 35.0% | |
| CACAACAAACTCAAGATCAT+GGG | - | chr3.3:65184658-65184677 | MS.gene70704:intron | 35.0% | |
| CGATTATAATAGCTTGGAAC+AGG | - | chr3.3:65184782-65184801 | MS.gene70704:intron | 35.0% | |
| CTCATGTAGAAGTCTATTTG+TGG | - | chr3.3:65187860-65187879 | MS.gene70704:CDS | 35.0% | |
| CTCCTATTCATAGAAGTTGT+CGG | - | chr3.3:65187093-65187112 | MS.gene70704:CDS | 35.0% | |
| GAAACAACAAACTCACATGT+AGG | + | chr3.3:65186398-65186417 | None:intergenic | 35.0% | |
| GAACAAGCTATATCCATCAT+TGG | - | chr3.3:65185575-65185594 | MS.gene70704:CDS | 35.0% | |
| GAGTCTTCTAATCTCATTGT+TGG | - | chr3.3:65185370-65185389 | MS.gene70704:intron | 35.0% | |
| GGCTGAGTTATATTGTTTGT+TGG | - | chr3.3:65185715-65185734 | MS.gene70704:intron | 35.0% | |
| GTAGAAGGAATGATATACAC+AGG | - | chr3.3:65187609-65187628 | MS.gene70704:intron | 35.0% | |
| GTAGGTCCTGCAATAAATTA+GGG | + | chr3.3:65185942-65185961 | None:intergenic | 35.0% | |
| TAGAAGCTATTGTGAAAGCT+AGG | - | chr3.3:65186870-65186889 | MS.gene70704:CDS | 35.0% | |
| TCCATATTGAAAGGTAACTG+AGG | - | chr3.3:65185327-65185346 | MS.gene70704:intron | 35.0% | |
| TGATTGCCATCTCAATGATT+GGG | + | chr3.3:65185974-65185993 | None:intergenic | 35.0% | |
| TGTAGGTCCTGCAATAAATT+AGG | + | chr3.3:65185943-65185962 | None:intergenic | 35.0% | |
| TGTTCAGGTCTTGAATCATT+TGG | - | chr3.3:65184875-65184894 | MS.gene70704:intron | 35.0% | |
| TTTGACAAACAACAGTGTTC+AGG | - | chr3.3:65184860-65184879 | MS.gene70704:intron | 35.0% | |
| ! | CAGAACCAGGTTAGTTAATT+GGG | - | chr3.3:65186477-65186496 | MS.gene70704:intron | 35.0% |
| ! | CTCTGAAGGCTTAAGTTTAA+TGG | - | chr3.3:65186586-65186605 | MS.gene70704:intron | 35.0% |
| ! | GTTCTGCAATATGGCTTTTT+AGG | + | chr3.3:65186463-65186482 | None:intergenic | 35.0% |
| ! | TACTTGCCATTTCCATTCAT+TGG | - | chr3.3:65184963-65184982 | MS.gene70704:CDS | 35.0% |
| !! | AGAAGTGTTGACATTGATCA+TGG | - | chr3.3:65186818-65186837 | MS.gene70704:CDS | 35.0% |
| !! | CTCGATTTTATTTAGGCTCA+AGG | - | chr3.3:65187220-65187239 | MS.gene70704:intron | 35.0% |
| !! | GAAGTGTTGACATTGATCAT+GGG | - | chr3.3:65186819-65186838 | MS.gene70704:CDS | 35.0% |
| !! | TGAGTTTGTTGTGGCAAATA+AGG | + | chr3.3:65184651-65184670 | None:intergenic | 35.0% |
| !! | TGCATGAATTTTAGAAGCTG+TGG | - | chr3.3:65185006-65185025 | MS.gene70704:CDS | 35.0% |
| !! | TTTGGATTAGTGAGGCAAAT+GGG | + | chr3.3:65187995-65188014 | None:intergenic | 35.0% |
| !!! | AATAGACTTTTTTAGGGGAG+AGG | - | chr3.3:65186534-65186553 | MS.gene70704:intron | 35.0% |
| !!! | TGTTTTGACTGGAAGCTTTT+GGG | + | chr3.3:65187679-65187698 | None:intergenic | 35.0% |
| AAAAGCCATATTGCAGAACC+AGG | - | chr3.3:65186464-65186483 | MS.gene70704:intron | 40.0% | |
| AACTGTTTCATCATGTCCCA+TGG | + | chr3.3:65187025-65187044 | None:intergenic | 40.0% | |
| AAGAGAGTAGTGTGTGTTGA+AGG | + | chr3.3:65186421-65186440 | None:intergenic | 40.0% | |
| ACAAAGAGCAATGAATGGAC+AGG | - | chr3.3:65185403-65185422 | MS.gene70704:intron | 40.0% | |
| ACAACAAACTCACATGTAGG+TGG | + | chr3.3:65186395-65186414 | None:intergenic | 40.0% | |
| ACCATTGTTGAGCAAAGTGA+AGG | - | chr3.3:65185993-65186012 | MS.gene70704:intron | 40.0% | |
| AGAGAGTAGTGTGTGTTGAA+GGG | + | chr3.3:65186420-65186439 | None:intergenic | 40.0% | |
| ATACCTGCAAGCCTTAATTG+AGG | + | chr3.3:65185849-65185868 | None:intergenic | 40.0% | |
| ATCAGAAGCAGAACTTGCAT+GGG | + | chr3.3:65187750-65187769 | None:intergenic | 40.0% | |
| ATGATTGGGGCAAATGATGT+AGG | + | chr3.3:65185960-65185979 | None:intergenic | 40.0% | |
| ATTGATTATAGCAGATGGGC+AGG | - | chr3.3:65186031-65186050 | MS.gene70704:intron | 40.0% | |
| ATTTGCCCCAATCATTGAGA+TGG | - | chr3.3:65185965-65185984 | MS.gene70704:intron | 40.0% | |
| CAAACAGCAATCGTAGTAGA+AGG | - | chr3.3:65187594-65187613 | MS.gene70704:intron | 40.0% | |
| CATTTGCCTCACTAATCCAA+AGG | - | chr3.3:65187994-65188013 | MS.gene70704:CDS | 40.0% | |
| CCACAACAAACTCAAGATCA+TGG | - | chr3.3:65184657-65184676 | MS.gene70704:intron | 40.0% | |
| CCTTCGTATTATTAGGTGCA+AGG | - | chr3.3:65185501-65185520 | MS.gene70704:intron | 40.0% | |
| CCTTGCACCTAATAATACGA+AGG | + | chr3.3:65185504-65185523 | None:intergenic | 40.0% | |
| CTGGTCAGGTATTTCCATTA+AGG | + | chr3.3:65187464-65187483 | None:intergenic | 40.0% | |
| GATAACTTGATTCCCTGCTT+TGG | - | chr3.3:65185623-65185642 | MS.gene70704:CDS | 40.0% | |
| GATTGATAGGGGATATTCAC+TGG | + | chr3.3:65186978-65186997 | None:intergenic | 40.0% | |
| GATTGCCATCTCAATGATTG+GGG | + | chr3.3:65185973-65185992 | None:intergenic | 40.0% | |
| GCCTCAGTTACCTTTCAATA+TGG | + | chr3.3:65185331-65185350 | None:intergenic | 40.0% | |
| GGTAAAGAATAAAGGACCAC+AGG | + | chr3.3:65186906-65186925 | None:intergenic | 40.0% | |
| GTGATTGCCATCTCAATGAT+TGG | + | chr3.3:65185975-65185994 | None:intergenic | 40.0% | |
| GTTTGCACTTTCTGCCTTAA+TGG | - | chr3.3:65187447-65187466 | MS.gene70704:intron | 40.0% | |
| TACCTGCAAGCCTTAATTGA+GGG | + | chr3.3:65185848-65185867 | None:intergenic | 40.0% | |
| TAGGCTACTAGTGCTATCAA+GGG | + | chr3.3:65186444-65186463 | None:intergenic | 40.0% | |
| TATCAGAAGCAGAACTTGCA+TGG | + | chr3.3:65187751-65187770 | None:intergenic | 40.0% | |
| TCCGACTAACACGATTGATA+GGG | + | chr3.3:65186990-65187009 | None:intergenic | 40.0% | |
| TGGATCACATTCAAAACGGA+GGG | - | chr3.3:65184566-65184585 | MS.gene70704:CDS | 40.0% | |
| TGGGTGGATCACATTCAAAA+CGG | - | chr3.3:65184562-65184581 | MS.gene70704:CDS | 40.0% | |
| TTAGGCTACTAGTGCTATCA+AGG | + | chr3.3:65186445-65186464 | None:intergenic | 40.0% | |
| ! | AGTGTTGAGGTGTTCAGTAA+AGG | + | chr3.3:65186232-65186251 | None:intergenic | 40.0% |
| ! | CAAGATGTTTCTGTAGTTGG+AGG | - | chr3.3:65185213-65185232 | MS.gene70704:CDS | 40.0% |
| ! | CACATGTAGGTGGTGTTTTT+AGG | + | chr3.3:65186385-65186404 | None:intergenic | 40.0% |
| ! | GAAGATTGTCAACTTTTCGC+AGG | - | chr3.3:65186790-65186809 | MS.gene70704:CDS | 40.0% |
| ! | GAGAGAAAATGAGAGGCATA+TGG | - | chr3.3:65187159-65187178 | MS.gene70704:intron | 40.0% |
| ! | GCAGAACCAGGTTAGTTAAT+TGG | - | chr3.3:65186476-65186495 | MS.gene70704:intron | 40.0% |
| ! | GCTGAGGATAGATTTTGTCA+TGG | - | chr3.3:65185786-65185805 | MS.gene70704:CDS | 40.0% |
| ! | TGTTTGCTTTCTCTTGCTGT+TGG | - | chr3.3:65187786-65187805 | MS.gene70704:intron | 40.0% |
| ! | TTGATTCCCTGCTTTGGATT+TGG | - | chr3.3:65185629-65185648 | MS.gene70704:CDS | 40.0% |
| !! | ACTAACCTGGTTCTGCAATA+TGG | + | chr3.3:65186472-65186491 | None:intergenic | 40.0% |
| !! | AGCTAAAGAGCATTCTGTCA+TGG | - | chr3.3:65186699-65186718 | MS.gene70704:intron | 40.0% |
| !! | CCATGATCTTGAGTTTGTTG+TGG | + | chr3.3:65184660-65184679 | None:intergenic | 40.0% |
| !! | CTTTGGATTAGTGAGGCAAA+TGG | + | chr3.3:65187996-65188015 | None:intergenic | 40.0% |
| !! | TGGGGTAGGCTTTATTGTAT+TGG | - | chr3.3:65187512-65187531 | MS.gene70704:intron | 40.0% |
| !! | TTTTGACTGGAAGCTTTTGG+GGG | + | chr3.3:65187677-65187696 | None:intergenic | 40.0% |
| !!! | ATGTAGGTGGTGTTTTTAGG+AGG | + | chr3.3:65186382-65186401 | None:intergenic | 40.0% |
| !!! | CTGTTTTGACTGGAAGCTTT+TGG | + | chr3.3:65187680-65187699 | None:intergenic | 40.0% |
| !!! | GTTTTGACTGGAAGCTTTTG+GGG | + | chr3.3:65187678-65187697 | None:intergenic | 40.0% |
| !!! | TGTAGGTGGTGTTTTTAGGA+GGG | + | chr3.3:65186381-65186400 | None:intergenic | 40.0% |
| AAAGATGGTGCGCCATATTG+AGG | + | chr3.3:65187650-65187669 | None:intergenic | 45.0% | |
| AATCCAAAGGACATGGCCTT+TGG | - | chr3.3:65188007-65188026 | MS.gene70704:CDS | 45.0% | |
| ACCATCTCCAAATCCAAAGC+AGG | + | chr3.3:65185639-65185658 | None:intergenic | 45.0% | |
| AGTGCACCATCTCAGAAACA+CGG | - | chr3.3:65187710-65187729 | MS.gene70704:intron | 45.0% | |
| ATTATAGCAGATGGGCAGGT+AGG | - | chr3.3:65186035-65186054 | MS.gene70704:intron | 45.0% | |
| CCAAAAGTCAGCACGTTGAT+CGG | + | chr3.3:65185249-65185268 | None:intergenic | 45.0% | |
| CCATCTCCAAATCCAAAGCA+GGG | + | chr3.3:65185638-65185657 | None:intergenic | 45.0% | |
| CCCCTATCAATCGTGTTAGT+CGG | - | chr3.3:65186986-65187005 | MS.gene70704:intron | 45.0% | |
| CCGACTAACACGATTGATAG+GGG | + | chr3.3:65186989-65187008 | None:intergenic | 45.0% | |
| CCTCACTAATCCAAAGGACA+TGG | - | chr3.3:65188000-65188019 | MS.gene70704:CDS | 45.0% | |
| CTCCGACTAACACGATTGAT+AGG | + | chr3.3:65186991-65187010 | None:intergenic | 45.0% | |
| GAACATGGATCGGTCTAGAA+AGG | - | chr3.3:65187417-65187436 | MS.gene70704:intron | 45.0% | |
| GCCTTCACTTTGCTCAACAA+TGG | + | chr3.3:65185997-65186016 | None:intergenic | 45.0% | |
| GCTAGGTAATTATCTGCCTG+TGG | - | chr3.3:65186887-65186906 | MS.gene70704:intron | 45.0% | |
| GGAAATACCTGACCAGTACA+AGG | - | chr3.3:65187468-65187487 | MS.gene70704:intron | 45.0% | |
| GGATCACATTCAAAACGGAG+GGG | - | chr3.3:65184567-65184586 | MS.gene70704:CDS | 45.0% | |
| GGCTTGCAGGTATTTGAACA+TGG | - | chr3.3:65185856-65185875 | MS.gene70704:intron | 45.0% | |
| GGGAATTGGTCCCTCAATTA+AGG | - | chr3.3:65185835-65185854 | MS.gene70704:intron | 45.0% | |
| GTGGATCACATTCAAAACGG+AGG | - | chr3.3:65184565-65184584 | MS.gene70704:CDS | 45.0% | |
| GTTCTAGTGTTGCCTTGTAC+TGG | + | chr3.3:65187483-65187502 | None:intergenic | 45.0% | |
| TAGGTGCAAGGTCGTTTCAA+AGG | - | chr3.3:65185513-65185532 | MS.gene70704:intron | 45.0% | |
| TCAATCGTGTTAGTCGGAGT+TGG | - | chr3.3:65186992-65187011 | MS.gene70704:intron | 45.0% | |
| TCAGAAGCAGAACTTGCATG+GGG | + | chr3.3:65187749-65187768 | None:intergenic | 45.0% | |
| TTATAGCAGATGGGCAGGTA+GGG | - | chr3.3:65186036-65186055 | MS.gene70704:intron | 45.0% | |
| ! | GTAACACCGTGTTTCTGAGA+TGG | + | chr3.3:65187719-65187738 | None:intergenic | 45.0% |
| ! | TTTGACTGGAAGCTTTTGGG+GGG | + | chr3.3:65187676-65187695 | None:intergenic | 45.0% |
| !! | AAGAGCATTCTGTCATGGTG+TGG | - | chr3.3:65186704-65186723 | MS.gene70704:intron | 45.0% |
| !! | CCATGTCCTTTGGATTAGTG+AGG | + | chr3.3:65188003-65188022 | None:intergenic | 45.0% |
| !! | GATTTGAGGAAGTGCTGTCA+CGG | - | chr3.3:65185808-65185827 | MS.gene70704:CDS | 45.0% |
| !! | GTTTTTAGGAGGGGGGAAAT+GGG | + | chr3.3:65186371-65186390 | None:intergenic | 45.0% |
| !! | TGTTTCTGAGATGGTGCACT+GGG | + | chr3.3:65187710-65187729 | None:intergenic | 45.0% |
| !!! | GTAGGTGGTGTTTTTAGGAG+GGG | + | chr3.3:65186380-65186399 | None:intergenic | 45.0% |
| !!! | TAGGTGGTGTTTTTAGGAGG+GGG | + | chr3.3:65186379-65186398 | None:intergenic | 45.0% |
| !!! | TGTTTTTAGGAGGGGGGAAA+TGG | + | chr3.3:65186372-65186391 | None:intergenic | 45.0% |
| AACCTGATGTCCGCAACCAA+AGG | + | chr3.3:65188026-65188045 | None:intergenic | 50.0% | |
| AAGGACATGGCCTTTGGTTG+CGG | - | chr3.3:65188013-65188032 | MS.gene70704:CDS | 50.0% | |
| AGGAGATGCCTGCATGACAT+CGG | - | chr3.3:65185533-65185552 | MS.gene70704:intron | 50.0% | |
| ATTCAAAACGGAGGGGCTCT+AGG | - | chr3.3:65184574-65184593 | MS.gene70704:CDS | 50.0% | |
| CAACCAAAGGCCATGTCCTT+TGG | + | chr3.3:65188013-65188032 | None:intergenic | 50.0% | |
| CAGAAGCAGAACTTGCATGG+GGG | + | chr3.3:65187748-65187767 | None:intergenic | 50.0% | |
| GCATGCGAGAACAAGTGAAG+TGG | + | chr3.3:65188059-65188078 | None:intergenic | 50.0% | |
| GCTGTCACGGTATAGGGAAT+TGG | - | chr3.3:65185821-65185840 | MS.gene70704:CDS | 50.0% | |
| GGCAACGTTCTTCATCCTCA+AGG | - | chr3.3:65184595-65184614 | MS.gene70704:CDS | 50.0% | |
| GTCCCTCAATTAAGGCTTGC+AGG | - | chr3.3:65185843-65185862 | MS.gene70704:intron | 50.0% | |
| GTGTTAGTCGGAGTTGGAGA+CGG | - | chr3.3:65186998-65187017 | MS.gene70704:CDS | 50.0% | |
| TGTTAGTCGGAGTTGGAGAC+GGG | - | chr3.3:65186999-65187018 | MS.gene70704:CDS | 50.0% | |
| TTGGTTGCGGACATCAGGTT+AGG | - | chr3.3:65188026-65188045 | MS.gene70704:CDS | 50.0% | |
| ! | AGTGTTGCCTTGTACTGGTC+AGG | + | chr3.3:65187478-65187497 | None:intergenic | 50.0% |
| ! | CCCTGCTTTGGATTTGGAGA+TGG | - | chr3.3:65185635-65185654 | MS.gene70704:CDS | 50.0% |
| ! | GCTCAAAGCTATGGTGGTGT+TGG | - | chr3.3:65184705-65184724 | MS.gene70704:intron | 50.0% |
| !! | ACACCACCATAGCTTTGAGC+TGG | + | chr3.3:65184705-65184724 | None:intergenic | 50.0% |
| !! | AGGAAGTGCTGTCACGGTAT+AGG | - | chr3.3:65185814-65185833 | MS.gene70704:CDS | 50.0% |
| !! | GCTTTTGGGGGGTTGAAAGA+TGG | + | chr3.3:65187665-65187684 | None:intergenic | 50.0% |
| !! | GGAAGTGCTGTCACGGTATA+GGG | - | chr3.3:65185815-65185834 | MS.gene70704:CDS | 50.0% |
| !! | GTGTTTCTGAGATGGTGCAC+TGG | + | chr3.3:65187711-65187730 | None:intergenic | 50.0% |
| !! | GTTTCTGAGATGGTGCACTG+GGG | + | chr3.3:65187709-65187728 | None:intergenic | 50.0% |
| !!! | AGGTGGTGTTTTTAGGAGGG+GGG | + | chr3.3:65186378-65186397 | None:intergenic | 50.0% |
| !!! | CCGATCAACGTGCTGACTTT+TGG | - | chr3.3:65185246-65185265 | MS.gene70704:CDS | 50.0% |
| !!! | GGGGCGAAAACTGTTTTGAC+TGG | + | chr3.3:65187690-65187709 | None:intergenic | 50.0% |
| AGAACTTGCATGGGGGTTCG+TGG | + | chr3.3:65187741-65187760 | None:intergenic | 55.0% | |
| CCACCTCCAGCTCAAAGCTA+TGG | - | chr3.3:65184696-65184715 | MS.gene70704:intron | 55.0% | |
| CCTCCAGCTCAAAGCTATGG+TGG | - | chr3.3:65184699-65184718 | MS.gene70704:intron | 55.0% | |
| CCTCTACCGCCACCTCAATA+TGG | - | chr3.3:65187635-65187654 | MS.gene70704:intron | 55.0% | |
| GATGGTGCGCCATATTGAGG+TGG | + | chr3.3:65187647-65187666 | None:intergenic | 55.0% | |
| GCGAGAACAAGTGAAGTGGC+TGG | + | chr3.3:65188055-65188074 | None:intergenic | 55.0% | |
| GGAGATGCCTGCATGACATC+GGG | - | chr3.3:65185534-65185553 | MS.gene70704:intron | 55.0% | |
| GGCAGCATCAACACATGACC+AGG | - | chr3.3:65185746-65185765 | MS.gene70704:intron | 55.0% | |
| GTTCATGCCCGATGTCATGC+AGG | + | chr3.3:65185544-65185563 | None:intergenic | 55.0% | |
| TTAGGAGGGGGGAAATGGGT+CGG | + | chr3.3:65186367-65186386 | None:intergenic | 55.0% | |
| ! | CCATATTGAGGTGGCGGTAG+AGG | + | chr3.3:65187638-65187657 | None:intergenic | 55.0% |
| !! | CCACCATAGCTTTGAGCTGG+AGG | + | chr3.3:65184702-65184721 | None:intergenic | 55.0% |
| !! | CCATAGCTTTGAGCTGGAGG+TGG | + | chr3.3:65184699-65184718 | None:intergenic | 55.0% |
| GGCCTTTGGTTGCGGACATC+AGG | - | chr3.3:65188021-65188040 | MS.gene70704:CDS | 60.0% | |
| GGTGCGCCATATTGAGGTGG+CGG | + | chr3.3:65187644-65187663 | None:intergenic | 60.0% | |
| GGTGTGGCTGTGCTTGTCGT+TGG | - | chr3.3:65186720-65186739 | MS.gene70704:intron | 60.0% | |
| ! | ACTGAGGCTCTAGCGAGTGC+TGG | - | chr3.3:65185343-65185362 | MS.gene70704:intron | 60.0% |
| CGGAGTTGGAGACGGGCCAT+GGG | - | chr3.3:65187006-65187025 | MS.gene70704:CDS | 65.0% | |
| TCGGAGTTGGAGACGGGCCA+TGG | - | chr3.3:65187005-65187024 | MS.gene70704:CDS | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr3.3 | gene | 65184561 | 65188093 | 65184561 | ID=MS.gene70704 |
| chr3.3 | mRNA | 65184561 | 65188093 | 65184561 | ID=MS.gene70704.t1;Parent=MS.gene70704 |
| chr3.3 | exon | 65187851 | 65188093 | 65187851 | ID=MS.gene70704.t1.exon1;Parent=MS.gene70704.t1 |
| chr3.3 | CDS | 65187851 | 65188093 | 65187851 | ID=cds.MS.gene70704.t1;Parent=MS.gene70704.t1 |
| chr3.3 | exon | 65187230 | 65187314 | 65187230 | ID=MS.gene70704.t1.exon2;Parent=MS.gene70704.t1 |
| chr3.3 | CDS | 65187230 | 65187314 | 65187230 | ID=cds.MS.gene70704.t1;Parent=MS.gene70704.t1 |
| chr3.3 | exon | 65186998 | 65187138 | 65186998 | ID=MS.gene70704.t1.exon3;Parent=MS.gene70704.t1 |
| chr3.3 | CDS | 65186998 | 65187138 | 65186998 | ID=cds.MS.gene70704.t1;Parent=MS.gene70704.t1 |
| chr3.3 | exon | 65186790 | 65186903 | 65186790 | ID=MS.gene70704.t1.exon4;Parent=MS.gene70704.t1 |
| chr3.3 | CDS | 65186790 | 65186903 | 65186790 | ID=cds.MS.gene70704.t1;Parent=MS.gene70704.t1 |
| chr3.3 | exon | 65186602 | 65186699 | 65186602 | ID=MS.gene70704.t1.exon5;Parent=MS.gene70704.t1 |
| chr3.3 | CDS | 65186602 | 65186699 | 65186602 | ID=cds.MS.gene70704.t1;Parent=MS.gene70704.t1 |
| chr3.3 | exon | 65185763 | 65185842 | 65185763 | ID=MS.gene70704.t1.exon6;Parent=MS.gene70704.t1 |
| chr3.3 | CDS | 65185763 | 65185842 | 65185763 | ID=cds.MS.gene70704.t1;Parent=MS.gene70704.t1 |
| chr3.3 | exon | 65185570 | 65185675 | 65185570 | ID=MS.gene70704.t1.exon7;Parent=MS.gene70704.t1 |
| chr3.3 | CDS | 65185570 | 65185675 | 65185570 | ID=cds.MS.gene70704.t1;Parent=MS.gene70704.t1 |
| chr3.3 | exon | 65185139 | 65185266 | 65185139 | ID=MS.gene70704.t1.exon8;Parent=MS.gene70704.t1 |
| chr3.3 | CDS | 65185139 | 65185266 | 65185139 | ID=cds.MS.gene70704.t1;Parent=MS.gene70704.t1 |
| chr3.3 | exon | 65184879 | 65185053 | 65184879 | ID=MS.gene70704.t1.exon9;Parent=MS.gene70704.t1 |
| chr3.3 | CDS | 65184879 | 65185053 | 65184879 | ID=cds.MS.gene70704.t1;Parent=MS.gene70704.t1 |
| chr3.3 | exon | 65184561 | 65184668 | 65184561 | ID=MS.gene70704.t1.exon10;Parent=MS.gene70704.t1 |
| chr3.3 | CDS | 65184561 | 65184668 | 65184561 | ID=cds.MS.gene70704.t1;Parent=MS.gene70704.t1 |
| Gene Sequence |
| Protein sequence |
