Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70831.t1 | AFK36447.1 | 84.1 | 208 | 16 | 1 | 1 | 191 | 375 | 582 | 2.60E-81 | 311.6 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70831.t1 | Q8GUK1 | 59.6 | 208 | 67 | 1 | 1 | 191 | 388 | 595 | 3.1e-59 | 229.6 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70831.t1 | G7KCS4 | 84.1 | 208 | 16 | 1 | 1 | 191 | 375 | 582 | 1.9e-81 | 311.6 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene050838 | MS.gene70831 | 0.810037 | 1.41E-50 | -1.69E-46 |
| MS.gene057094 | MS.gene70831 | 0.838731 | 2.42E-57 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70831.t1 | MTR_5g088780 | 84.135 | 208 | 16 | 1 | 1 | 191 | 375 | 582 | 5.74e-113 | 334 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene70831.t1 | AT5G12290 | 61.058 | 208 | 64 | 4 | 1 | 191 | 388 | 595 | 1.74e-78 | 246 |
| MS.gene70831.t1 | AT5G12290 | 61.058 | 208 | 64 | 4 | 1 | 191 | 388 | 595 | 1.74e-78 | 246 |
| MS.gene70831.t1 | AT5G12290 | 73.050 | 141 | 38 | 0 | 1 | 141 | 388 | 528 | 9.64e-70 | 221 |
| MS.gene70831.t1 | AT5G12290 | 73.050 | 141 | 38 | 0 | 1 | 141 | 388 | 528 | 9.64e-70 | 221 |
Find 48 sgRNAs with CRISPR-Local
Find 337 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCATTTGCCCGTAGAATT+TGG | 0.284738 | 5.4:+70013943 | None:intergenic |
| GCGACAGGATATAATTGATT+TGG | 0.317677 | 5.4:-70011868 | MS.gene70831:intron |
| TGTGACATCACGCATTATTA+AGG | 0.358919 | 5.4:-70011811 | MS.gene70831:CDS |
| TTGTGTGAAGTTTGCAGTCC+AGG | 0.360199 | 5.4:+70011840 | None:intergenic |
| GGCTCGGGCTATGCTTATTC+AGG | 0.362953 | 5.4:-70014516 | MS.gene70831:intron |
| AAGAGGCACGCAGAAGCTTC+TGG | 0.387047 | 5.4:-70012023 | MS.gene70831:CDS |
| TGAAATCAACTTTGCTGTAC+TGG | 0.403195 | 5.4:-70013925 | MS.gene70831:CDS |
| GTACTAACATAATGAGTAGA+AGG | 0.408164 | 5.4:+70013877 | None:intergenic |
| TTCTACTCATTATGTTAGTA+CGG | 0.420224 | 5.4:-70013875 | MS.gene70831:CDS |
| TTCTCAATGGAGAGCTGGCT+CGG | 0.433442 | 5.4:-70014532 | MS.gene70831:CDS |
| GCCTCTTGACCGAACTGTAT+AGG | 0.441926 | 5.4:+70012039 | None:intergenic |
| ACAGGTTCAGAAGCTGAAAC+TGG | 0.449274 | 5.4:-70014069 | MS.gene70831:intron |
| TCCAGTGAATGCCTCAGATC+AGG | 0.452704 | 5.4:-70016289 | MS.gene70831:CDS |
| TCCTGATCTGAGGCATTCAC+TGG | 0.452856 | 5.4:+70016288 | None:intergenic |
| ATTTCTGTGCAGAATGTTGT+TGG | 0.473313 | 5.4:-70016343 | None:intergenic |
| AGAAGGGAGATAAAGAAGGC+AGG | 0.485939 | 5.4:+70013894 | None:intergenic |
| AGTACGGGCATGGTTCAAAC+AGG | 0.498837 | 5.4:-70013859 | MS.gene70831:intron |
| CCTATTCAAAACCTTCTCAA+TGG | 0.510450 | 5.4:-70014545 | MS.gene70831:CDS |
| AAACCTTCTCAATGGAGAGC+TGG | 0.516212 | 5.4:-70014537 | MS.gene70831:CDS |
| AAGCTTCTGGAGAGTGGCAG+TGG | 0.517925 | 5.4:-70012010 | MS.gene70831:intron |
| TGGAGCTGAACCAAATTCTA+CGG | 0.518403 | 5.4:-70013953 | MS.gene70831:CDS |
| CATCAAATTTATGTAGAGCA+AGG | 0.525524 | 5.4:-70012985 | MS.gene70831:CDS |
| TCTACTCATTATGTTAGTAC+GGG | 0.526903 | 5.4:-70013874 | MS.gene70831:CDS |
| TCTCAATGGAGAGCTGGCTC+GGG | 0.528130 | 5.4:-70014531 | MS.gene70831:CDS |
| GATACAAAAGCTGAAGGAAG+AGG | 0.528154 | 5.4:-70013069 | MS.gene70831:CDS |
| TGCTTGAGATAGTCATGGAC+AGG | 0.528465 | 5.4:-70016263 | MS.gene70831:intron |
| GAGTAGAAGGGAGATAAAGA+AGG | 0.535192 | 5.4:+70013890 | None:intergenic |
| CTTGGATCGCCTATACAGTT+CGG | 0.535768 | 5.4:-70012048 | MS.gene70831:CDS |
| AAGGAGGCTACTTGTTGTAG+AGG | 0.536687 | 5.4:-70013028 | MS.gene70831:CDS |
| ATCAAATTTATGTAGAGCAA+GGG | 0.539590 | 5.4:-70012984 | MS.gene70831:CDS |
| GCTTTCAGTGAGCAGACAAA+GGG | 0.539841 | 5.4:-70016321 | MS.gene70831:CDS |
| CCTTCCAGTTCTCAGACCCC+CGG | 0.547951 | 5.4:-70011774 | None:intergenic |
| ATAATTGATTTGGCTAGACC+TGG | 0.552770 | 5.4:-70011858 | MS.gene70831:CDS |
| GTAGAGTTGCTCGTATTCAA+AGG | 0.553986 | 5.4:-70013047 | MS.gene70831:CDS |
| GGCTTTCAGTGAGCAGACAA+AGG | 0.554564 | 5.4:-70016322 | MS.gene70831:CDS |
| GCCTATACAGTTCGGTCAAG+AGG | 0.560986 | 5.4:-70012040 | MS.gene70831:CDS |
| AATTTATGTAGAGCAAGGGT+TGG | 0.561932 | 5.4:-70012980 | MS.gene70831:intron |
| ACGCAGAAGCTTCTGGAGAG+TGG | 0.566127 | 5.4:-70012016 | MS.gene70831:CDS |
| TCATTATGTTAGTACGGGCA+TGG | 0.567668 | 5.4:-70013869 | MS.gene70831:CDS |
| GGAGCTGAACCAAATTCTAC+GGG | 0.569168 | 5.4:-70013952 | MS.gene70831:CDS |
| GGATAAATGTAGGTATGAGA+AGG | 0.586200 | 5.4:-70014579 | MS.gene70831:intron |
| CTCAAGCATTTCCTGATCTG+AGG | 0.591869 | 5.4:+70016278 | None:intergenic |
| GAGCCAGCTCTCCATTGAGA+AGG | 0.591992 | 5.4:+70014534 | None:intergenic |
| AATCAGGATACAAAAGCTGA+AGG | 0.597466 | 5.4:-70013075 | MS.gene70831:intron |
| GGAAATGCTTGAGATAGTCA+TGG | 0.604032 | 5.4:-70016268 | MS.gene70831:CDS |
| TTGTTGTAGAGGTTGAGAGA+AGG | 0.613158 | 5.4:-70013017 | MS.gene70831:CDS |
| TACTAACATAATGAGTAGAA+GGG | 0.625247 | 5.4:+70013878 | None:intergenic |
| GAGTTGCTCGTATTCAAAGG+AGG | 0.687775 | 5.4:-70013044 | MS.gene70831:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TAAAAAAAATAAAAAAATAT+TGG | - | chr5.4:70013115-70013134 | MS.gene70831:intron | 0.0% |
| !!! | TATTTTTTTATTTTTTTTAA+AGG | + | chr5.4:70013114-70013133 | None:intergenic | 0.0% |
| !! | TAATTTAATTCAAATAATAC+AGG | - | chr5.4:70013612-70013631 | MS.gene70831:intron | 10.0% |
| !!! | ATTGATATAAATTTTAAGAT+TGG | + | chr5.4:70014082-70014101 | None:intergenic | 10.0% |
| !!! | TTTTATTTTTTTTAAAGGTT+GGG | + | chr5.4:70013109-70013128 | None:intergenic | 10.0% |
| !!! | TTTTTATTTTTTTTAAAGGT+TGG | + | chr5.4:70013110-70013129 | None:intergenic | 10.0% |
| !! | AACTAAAAAATTATATTGGA+GGG | + | chr5.4:70012515-70012534 | None:intergenic | 15.0% |
| !! | CAAATATCATTAAATCATTT+AGG | + | chr5.4:70013342-70013361 | None:intergenic | 15.0% |
| !! | CTAAATGATTTAATGATATT+TGG | - | chr5.4:70013340-70013359 | MS.gene70831:intron | 15.0% |
| !! | TATCATTTAATAACTTCTAA+TGG | + | chr5.4:70015280-70015299 | None:intergenic | 15.0% |
| !! | TTATTTAACTAGTAGTATTT+AGG | + | chr5.4:70013901-70013920 | None:intergenic | 15.0% |
| !! | TTTAAATAGGAAAAATTACT+AGG | + | chr5.4:70013844-70013863 | None:intergenic | 15.0% |
| !!! | ATATATCCTCTTTTTTTTTT+TGG | + | chr5.4:70013050-70013069 | None:intergenic | 15.0% |
| !!! | ATTTAGTACTGTATTTTTAA+TGG | - | chr5.4:70015477-70015496 | MS.gene70831:intron | 15.0% |
| !!! | TTAGTAAAATAATTTGTCTA+GGG | + | chr5.4:70012232-70012251 | None:intergenic | 15.0% |
| !!! | TTATGATCTAATCTATTTTA+TGG | - | chr5.4:70013505-70013524 | MS.gene70831:intron | 15.0% |
| !!! | TTTAGTAAAATAATTTGTCT+AGG | + | chr5.4:70012233-70012252 | None:intergenic | 15.0% |
| !! | AAGAATTACAATATTACATC+TGG | + | chr5.4:70014328-70014347 | None:intergenic | 20.0% |
| !! | AATTATATTGCTCAAATGAA+AGG | - | chr5.4:70012787-70012806 | MS.gene70831:intron | 20.0% |
| !! | ACAATTTATTTCAAAGAATC+CGG | + | chr5.4:70015314-70015333 | None:intergenic | 20.0% |
| !! | ATAAAGTTTAACACAGATTT+CGG | + | chr5.4:70014992-70015011 | None:intergenic | 20.0% |
| !! | ATATAAAAAACTTGATTCCA+TGG | + | chr5.4:70015400-70015419 | None:intergenic | 20.0% |
| !! | ATGACAAACTTATAATAGAT+AGG | - | chr5.4:70014299-70014318 | MS.gene70831:intron | 20.0% |
| !! | GAACTAAAAAATTATATTGG+AGG | + | chr5.4:70012516-70012535 | None:intergenic | 20.0% |
| !! | GCTATTAATTCTCATAAAAA+GGG | - | chr5.4:70012911-70012930 | MS.gene70831:intron | 20.0% |
| !! | GTTTCTTAATACAATTCAAA+CGG | + | chr5.4:70012876-70012895 | None:intergenic | 20.0% |
| !! | TATATTTGAAAACAAACAGA+AGG | + | chr5.4:70013280-70013299 | None:intergenic | 20.0% |
| !! | TGCTATTAATTCTCATAAAA+AGG | - | chr5.4:70012910-70012929 | MS.gene70831:intron | 20.0% |
| !! | TTAATATAGATATATGGATC+CGG | - | chr5.4:70011930-70011949 | MS.gene70831:intron | 20.0% |
| !! | TTTATTTGCATCATATTGAT+TGG | - | chr5.4:70014851-70014870 | MS.gene70831:intron | 20.0% |
| !!! | AAGTTTTAATTTCTCATGTT+TGG | - | chr5.4:70016119-70016138 | MS.gene70831:intron | 20.0% |
| !!! | AATTTTTCCTATTTAAAGCT+GGG | - | chr5.4:70013847-70013866 | MS.gene70831:intron | 20.0% |
| !!! | CTTTTTTTTTTTGGAGAAAA+TGG | + | chr5.4:70013041-70013060 | None:intergenic | 20.0% |
| !!! | GAAGTGTTAATATAGATATA+TGG | - | chr5.4:70011924-70011943 | MS.gene70831:intron | 20.0% |
| !!! | TAAAGAAGTACAATTTATCA+GGG | + | chr5.4:70013697-70013716 | None:intergenic | 20.0% |
| !!! | TAATTTTTCCTATTTAAAGC+TGG | - | chr5.4:70013846-70013865 | MS.gene70831:intron | 20.0% |
| !!! | TAGTAAAATAATTTGTCTAG+GGG | + | chr5.4:70012231-70012250 | None:intergenic | 20.0% |
| !!! | TCAATATTTCACATTGTTTT+AGG | - | chr5.4:70014097-70014116 | MS.gene70831:intron | 20.0% |
| !!! | TCTATTTTATGGATAAATGT+AGG | - | chr5.4:70013516-70013535 | MS.gene70831:intron | 20.0% |
| !!! | TCTTTTAAAAATCTCATGAT+TGG | - | chr5.4:70015588-70015607 | MS.gene70831:intron | 20.0% |
| !!! | TTTAAAAGAGTAGTTTTTAG+AGG | - | chr5.4:70012367-70012386 | MS.gene70831:intron | 20.0% |
| !!! | TTTTCTCCAAAAAAAAAAAG+AGG | - | chr5.4:70013041-70013060 | MS.gene70831:CDS | 20.0% |
| ! | AATACAGGATTAAGATTGTT+CGG | - | chr5.4:70014439-70014458 | MS.gene70831:intron | 25.0% |
| ! | AATAGTCTAAAAGTTTACAC+AGG | - | chr5.4:70013787-70013806 | MS.gene70831:intron | 25.0% |
| ! | AATTCTAACAACAAAAAGCT+TGG | + | chr5.4:70014609-70014628 | None:intergenic | 25.0% |
| ! | AGAAAAAATGCATGTTTCAT+TGG | + | chr5.4:70015873-70015892 | None:intergenic | 25.0% |
| ! | ATACAGTACTAAATTTGAGA+AGG | + | chr5.4:70015471-70015490 | None:intergenic | 25.0% |
| ! | ATCAAATTTATGTAGAGCAA+GGG | - | chr5.4:70015121-70015140 | MS.gene70831:intron | 25.0% |
| ! | ATCTCCATTGCAATAATTTA+GGG | - | chr5.4:70015899-70015918 | MS.gene70831:intron | 25.0% |
| ! | ATGCTGATAAGATAGTAATT+TGG | - | chr5.4:70011882-70011901 | MS.gene70831:intron | 25.0% |
| ! | ATTCTAACAACAAAAAGCTT+GGG | + | chr5.4:70014608-70014627 | None:intergenic | 25.0% |
| ! | CTGATAAATTGTACTTCTTT+AGG | - | chr5.4:70013696-70013715 | MS.gene70831:intron | 25.0% |
| ! | GAACTAGATAAAATAAAGTC+AGG | + | chr5.4:70015163-70015182 | None:intergenic | 25.0% |
| ! | GGGGAACTAAAAAATTATAT+TGG | + | chr5.4:70012519-70012538 | None:intergenic | 25.0% |
| ! | TAATATAGATATATGGATCC+GGG | - | chr5.4:70011931-70011950 | MS.gene70831:intron | 25.0% |
| ! | TACAAATAGATGATATAGAG+AGG | + | chr5.4:70013413-70013432 | None:intergenic | 25.0% |
| ! | TACTAACATAATGAGTAGAA+GGG | + | chr5.4:70014230-70014249 | None:intergenic | 25.0% |
| ! | TATCACATTATAGTACCTTA+AGG | - | chr5.4:70012258-70012277 | MS.gene70831:intron | 25.0% |
| ! | TATCTCCATTGCAATAATTT+AGG | - | chr5.4:70015898-70015917 | MS.gene70831:intron | 25.0% |
| ! | TATTCACTTTGAATACTACA+TGG | + | chr5.4:70014423-70014442 | None:intergenic | 25.0% |
| ! | TCAGTATTCTATTAGTTGTT+AGG | + | chr5.4:70015977-70015996 | None:intergenic | 25.0% |
| ! | TGAAAGAAAAAATATGACCA+TGG | - | chr5.4:70015380-70015399 | MS.gene70831:intron | 25.0% |
| ! | TGAAAGAAATAGAGGAAAAT+GGG | + | chr5.4:70012597-70012616 | None:intergenic | 25.0% |
| ! | TTATAATACAGTAGTCAGTA+AGG | - | chr5.4:70014729-70014748 | MS.gene70831:intron | 25.0% |
| ! | TTCTACTCATTATGTTAGTA+CGG | - | chr5.4:70014230-70014249 | MS.gene70831:intron | 25.0% |
| ! | TTTCTCAAAAAACAAAGGTA+CGG | - | chr5.4:70012714-70012733 | MS.gene70831:intron | 25.0% |
| !! | AAAAAAATATTGGTGCTTCA+TGG | - | chr5.4:70013125-70013144 | MS.gene70831:intron | 25.0% |
| !! | AAAAAATATTGGTGCTTCAT+GGG | - | chr5.4:70013126-70013145 | MS.gene70831:intron | 25.0% |
| !! | AAAATTATATTGGAGGGTTT+TGG | + | chr5.4:70012509-70012528 | None:intergenic | 25.0% |
| !! | AAAGAAGTACAATTTATCAG+GGG | + | chr5.4:70013696-70013715 | None:intergenic | 25.0% |
| !! | AAATTATATTGGAGGGTTTT+GGG | + | chr5.4:70012508-70012527 | None:intergenic | 25.0% |
| !! | AGGTTCTCACAATTATATTT+TGG | - | chr5.4:70014117-70014136 | MS.gene70831:intron | 25.0% |
| !! | CATTTTCTCCAAAAAAAAAG+AGG | - | chr5.4:70012936-70012955 | MS.gene70831:intron | 25.0% |
| !! | CTAAAGAAGTACAATTTATC+AGG | + | chr5.4:70013698-70013717 | None:intergenic | 25.0% |
| !! | TATTCCTAAGCTATCTATTT+TGG | - | chr5.4:70014888-70014907 | MS.gene70831:intron | 25.0% |
| !! | TTATAACTTTTCACTGTTAC+AGG | - | chr5.4:70014018-70014037 | MS.gene70831:intron | 25.0% |
| !! | TTCTAATGGTGTTAAATTGT+GGG | + | chr5.4:70015266-70015285 | None:intergenic | 25.0% |
| !!! | TAGTACTGTATTTTTAATGG+AGG | - | chr5.4:70015480-70015499 | MS.gene70831:intron | 25.0% |
| AAAGTGATAACTATGAACAG+AGG | + | chr5.4:70013453-70013472 | None:intergenic | 30.0% | |
| AAATAGATGATATAGAGAGG+AGG | + | chr5.4:70013410-70013429 | None:intergenic | 30.0% | |
| AAATGATACAAATATGACGC+CGG | - | chr5.4:70015292-70015311 | MS.gene70831:intron | 30.0% | |
| AATACTAAACCTCCTCATTT+GGG | + | chr5.4:70012540-70012559 | None:intergenic | 30.0% | |
| ACTTTATCTGATATTCTGCT+TGG | - | chr5.4:70015005-70015024 | MS.gene70831:intron | 30.0% | |
| AGATACACTCTGAATAAAGA+AGG | - | chr5.4:70013745-70013764 | MS.gene70831:intron | 30.0% | |
| ATATTGCTCAAATGAAAGGT+GGG | - | chr5.4:70012791-70012810 | MS.gene70831:intron | 30.0% | |
| ATGAAACAGCTAACATAAAG+TGG | + | chr5.4:70012096-70012115 | None:intergenic | 30.0% | |
| ATTATATGTTAGCAGTAGCT+TGG | - | chr5.4:70011990-70012009 | MS.gene70831:intron | 30.0% | |
| CAAACAGAAGGAAAACATTT+AGG | + | chr5.4:70013268-70013287 | None:intergenic | 30.0% | |
| CAAACAGCGTTTAGTTAATT+TGG | - | chr5.4:70015938-70015957 | MS.gene70831:intron | 30.0% | |
| CATCAAATTTATGTAGAGCA+AGG | - | chr5.4:70015120-70015139 | MS.gene70831:intron | 30.0% | |
| CATTGCAATAATTTAGGGAA+AGG | - | chr5.4:70015904-70015923 | MS.gene70831:intron | 30.0% | |
| CGTCATTTCTCAAAAAACAA+AGG | - | chr5.4:70012709-70012728 | MS.gene70831:intron | 30.0% | |
| CTTTCCCTAAATTATTGCAA+TGG | + | chr5.4:70015906-70015925 | None:intergenic | 30.0% | |
| GAATACTACGTTATATGATG+TGG | + | chr5.4:70011970-70011989 | None:intergenic | 30.0% | |
| GATACACTCTGAATAAAGAA+GGG | - | chr5.4:70013746-70013765 | MS.gene70831:intron | 30.0% | |
| GTAAATCAAAAGAATGCTCA+AGG | + | chr5.4:70014699-70014718 | None:intergenic | 30.0% | |
| GTACTAACATAATGAGTAGA+AGG | + | chr5.4:70014231-70014250 | None:intergenic | 30.0% | |
| GTAGTATTCAAAGTGAATAC+AGG | - | chr5.4:70014424-70014443 | MS.gene70831:intron | 30.0% | |
| GTGAAAGAAATAGAGGAAAA+TGG | + | chr5.4:70012598-70012617 | None:intergenic | 30.0% | |
| TAAATTAAGTGAACGAAGTG+TGG | - | chr5.4:70014373-70014392 | MS.gene70831:intron | 30.0% | |
| TAATACTAAACCTCCTCATT+TGG | + | chr5.4:70012541-70012560 | None:intergenic | 30.0% | |
| TATATTGCTCAAATGAAAGG+TGG | - | chr5.4:70012790-70012809 | MS.gene70831:intron | 30.0% | |
| TATGCCAAAATAGATAGCTT+AGG | + | chr5.4:70014895-70014914 | None:intergenic | 30.0% | |
| TATTCTTGCACAAATTGATG+TGG | + | chr5.4:70015217-70015236 | None:intergenic | 30.0% | |
| TCTACTCATTATGTTAGTAC+GGG | - | chr5.4:70014231-70014250 | MS.gene70831:intron | 30.0% | |
| TCTGGATTTAGCATCATAAT+GGG | - | chr5.4:70012016-70012035 | MS.gene70831:CDS | 30.0% | |
| TGAAACAGCTAACATAAAGT+GGG | + | chr5.4:70012095-70012114 | None:intergenic | 30.0% | |
| TTCTGGATTTAGCATCATAA+TGG | - | chr5.4:70012015-70012034 | MS.gene70831:CDS | 30.0% | |
| ! | AATTATATTGGAGGGTTTTG+GGG | + | chr5.4:70012507-70012526 | None:intergenic | 30.0% |
| ! | AGACTTGAAACTTCATTTTG+AGG | + | chr5.4:70015187-70015206 | None:intergenic | 30.0% |
| ! | ATGTCTTTTCCTAATTTCGA+TGG | - | chr5.4:70012168-70012187 | MS.gene70831:intron | 30.0% |
| ! | ATTTGCATCATATTGATTGG+AGG | - | chr5.4:70014854-70014873 | MS.gene70831:intron | 30.0% |
| ! | CTTAATTTAGAGTCGGTAAA+AGG | + | chr5.4:70014362-70014381 | None:intergenic | 30.0% |
| ! | CTTCTAATGGTGTTAAATTG+TGG | + | chr5.4:70015267-70015286 | None:intergenic | 30.0% |
| ! | GATTTAGATTTTATGTTCCC+TGG | - | chr5.4:70016160-70016179 | MS.gene70831:intron | 30.0% |
| ! | TCGTTCACTTAATTTAGAGT+CGG | + | chr5.4:70014369-70014388 | None:intergenic | 30.0% |
| ! | TTCTCAAAAAACAAAGGTAC+GGG | - | chr5.4:70012715-70012734 | MS.gene70831:intron | 30.0% |
| ! | TTGGTCACATTTTTGTAAGA+TGG | - | chr5.4:70016138-70016157 | MS.gene70831:intron | 30.0% |
| ! | TTTATGTTCCCTGGTATTTT+GGG | - | chr5.4:70016169-70016188 | MS.gene70831:intron | 30.0% |
| ! | TTTTATGTTCCCTGGTATTT+TGG | - | chr5.4:70016168-70016187 | MS.gene70831:intron | 30.0% |
| !! | ATCTTATCCCAGCTTTAAAT+AGG | + | chr5.4:70013857-70013876 | None:intergenic | 30.0% |
| AAAGTAATTGGCATGGACAT+TGG | + | chr5.4:70012045-70012064 | None:intergenic | 35.0% | |
| AAATAAATTGTTCCCCTTCC+AGG | - | chr5.4:70015323-70015342 | MS.gene70831:intron | 35.0% | |
| AAGAAATAGAGGAAAATGGG+AGG | + | chr5.4:70012594-70012613 | None:intergenic | 35.0% | |
| AATCAGGATACAAAAGCTGA+AGG | - | chr5.4:70015030-70015049 | MS.gene70831:intron | 35.0% | |
| AATTTATGTAGAGCAAGGGT+TGG | - | chr5.4:70015125-70015144 | MS.gene70831:intron | 35.0% | |
| ACAGATGTAGTGATGTAGAT+TGG | + | chr5.4:70013973-70013992 | None:intergenic | 35.0% | |
| ACAGGTAACATGATGTATGT+AGG | - | chr5.4:70013630-70013649 | MS.gene70831:intron | 35.0% | |
| ACATCGAAGTTCTTGATGTA+TGG | - | chr5.4:70015829-70015848 | MS.gene70831:intron | 35.0% | |
| AGAAATAGAGGAAAATGGGA+GGG | + | chr5.4:70012593-70012612 | None:intergenic | 35.0% | |
| AGAGATGCACACTATATGTT+GGG | - | chr5.4:70016019-70016038 | MS.gene70831:intron | 35.0% | |
| AGGATTAAGATTGTTCGGAA+GGG | - | chr5.4:70014444-70014463 | MS.gene70831:intron | 35.0% | |
| ATAATTTAGGGAAAGGAGGT+TGG | - | chr5.4:70015911-70015930 | MS.gene70831:intron | 35.0% | |
| ATACTAAACCTCCTCATTTG+GGG | + | chr5.4:70012539-70012558 | None:intergenic | 35.0% | |
| CACAGATTTCGGAAAATCAT+TGG | + | chr5.4:70014981-70015000 | None:intergenic | 35.0% | |
| CAGATGTAGTGATGTAGATT+GGG | + | chr5.4:70013972-70013991 | None:intergenic | 35.0% | |
| CAGGTAACATGATGTATGTA+GGG | - | chr5.4:70013631-70013650 | MS.gene70831:intron | 35.0% | |
| CCTAATTTCGATGGCATTTA+AGG | - | chr5.4:70012177-70012196 | MS.gene70831:intron | 35.0% | |
| CCTATTCAAAACCTTCTCAA+TGG | - | chr5.4:70013560-70013579 | MS.gene70831:intron | 35.0% | |
| CCTTAAATGCCATCGAAATT+AGG | + | chr5.4:70012180-70012199 | None:intergenic | 35.0% | |
| CTCAATTTATACACCTGGAA+GGG | + | chr5.4:70015339-70015358 | None:intergenic | 35.0% | |
| CTGTTCTCAATTTATACACC+TGG | + | chr5.4:70015344-70015363 | None:intergenic | 35.0% | |
| GATATTCTGCTTGGTAAATC+AGG | - | chr5.4:70015014-70015033 | MS.gene70831:intron | 35.0% | |
| GCGACAGGATATAATTGATT+TGG | - | chr5.4:70016237-70016256 | MS.gene70831:intron | 35.0% | |
| GGATAAATGTAGGTATGAGA+AGG | - | chr5.4:70013526-70013545 | MS.gene70831:intron | 35.0% | |
| GTATATCATGCATTCATGCT+TGG | + | chr5.4:70015643-70015662 | None:intergenic | 35.0% | |
| TAACAACAAAAAGCTTGGGA+TGG | + | chr5.4:70014604-70014623 | None:intergenic | 35.0% | |
| TACAATTCAAACGGTTCAAG+AGG | + | chr5.4:70012867-70012886 | None:intergenic | 35.0% | |
| TATTATGAACAGTTTGCGAC+AGG | - | chr5.4:70016222-70016241 | MS.gene70831:intron | 35.0% | |
| TATTGCTCAAATGAAAGGTG+GGG | - | chr5.4:70012792-70012811 | MS.gene70831:intron | 35.0% | |
| TCAATTTATACACCTGGAAG+GGG | + | chr5.4:70015338-70015357 | None:intergenic | 35.0% | |
| TCTCAATTTATACACCTGGA+AGG | + | chr5.4:70015340-70015359 | None:intergenic | 35.0% | |
| TGACAATATATCTCCGTTAC+AGG | - | chr5.4:70015994-70016013 | MS.gene70831:intron | 35.0% | |
| TGAGCAAGTGAAAGAAATAG+AGG | + | chr5.4:70012605-70012624 | None:intergenic | 35.0% | |
| TGCAATAATTTAGGGAAAGG+AGG | - | chr5.4:70015907-70015926 | MS.gene70831:intron | 35.0% | |
| TGGTGTTCTATTCTATTTGG+AGG | + | chr5.4:70015623-70015642 | None:intergenic | 35.0% | |
| TGTGACATCACGCATTATTA+AGG | - | chr5.4:70016294-70016313 | MS.gene70831:CDS | 35.0% | |
| TTGTGCAAGAATACTCATGA+CGG | - | chr5.4:70015224-70015243 | MS.gene70831:intron | 35.0% | |
| TTTCATTTGCCCGTAGAATT+TGG | + | chr5.4:70014165-70014184 | None:intergenic | 35.0% | |
| TTTGAATACTACATGGTGCA+GGG | + | chr5.4:70014416-70014435 | None:intergenic | 35.0% | |
| ! | ATCAGAAGTACACTGAGAAT+CGG | + | chr5.4:70015775-70015794 | None:intergenic | 35.0% |
| ! | CAATTATTTTCCAAGTCTGC+GGG | - | chr5.4:70014920-70014939 | MS.gene70831:intron | 35.0% |
| ! | CCAATTATTTTCCAAGTCTG+CGG | - | chr5.4:70014919-70014938 | MS.gene70831:intron | 35.0% |
| ! | TGAAATCAACTTTGCTGTAC+TGG | - | chr5.4:70014180-70014199 | MS.gene70831:intron | 35.0% |
| ! | TTATGTTCCCTGGTATTTTG+GGG | - | chr5.4:70016170-70016189 | MS.gene70831:intron | 35.0% |
| !! | ATAATTGATTTGGCTAGACC+TGG | - | chr5.4:70016247-70016266 | MS.gene70831:intron | 35.0% |
| !! | ATTATATTGGAGGGTTTTGG+GGG | + | chr5.4:70012506-70012525 | None:intergenic | 35.0% |
| !! | CAATTACTTTTGATGGGAGT+GGG | - | chr5.4:70012055-70012074 | MS.gene70831:intron | 35.0% |
| !! | CAGTTCTAGAACATAGGAAA+TGG | - | chr5.4:70012833-70012852 | MS.gene70831:intron | 35.0% |
| !! | CCATGCCAATTACTTTTGAT+GGG | - | chr5.4:70012049-70012068 | MS.gene70831:CDS | 35.0% |
| !! | GCTTGGTGTTCTATTCTATT+TGG | + | chr5.4:70015626-70015645 | None:intergenic | 35.0% |
| !! | TCCATGCCAATTACTTTTGA+TGG | - | chr5.4:70012048-70012067 | MS.gene70831:CDS | 35.0% |
| !!! | ACGCACATCCTCTTTTTTTT+TGG | + | chr5.4:70012947-70012966 | None:intergenic | 35.0% |
| !!! | CCATTGAGAAGGTTTTGAAT+AGG | + | chr5.4:70013563-70013582 | None:intergenic | 35.0% |
| !!! | TTTTTTAGTTCCCCCAAATG+AGG | - | chr5.4:70012525-70012544 | MS.gene70831:intron | 35.0% |
| AACTCGCAAACAAAGCCTTA+AGG | + | chr5.4:70012276-70012295 | None:intergenic | 40.0% | |
| ACTCCCACATATTCTAGATG+AGG | + | chr5.4:70015731-70015750 | None:intergenic | 40.0% | |
| ATAGAGGAACTACAGGTGAA+GGG | + | chr5.4:70014539-70014558 | None:intergenic | 40.0% | |
| ATTGCTCAAATGAAAGGTGG+GGG | - | chr5.4:70012793-70012812 | MS.gene70831:intron | 40.0% | |
| CAGGATTAAGATTGTTCGGA+AGG | - | chr5.4:70014443-70014462 | MS.gene70831:intron | 40.0% | |
| CCACTCCCATCAAAAGTAAT+TGG | + | chr5.4:70012057-70012076 | None:intergenic | 40.0% | |
| CCCATCAAAAGTAATTGGCA+TGG | + | chr5.4:70012052-70012071 | None:intergenic | 40.0% | |
| CCGCAGACTTGGAAAATAAT+TGG | + | chr5.4:70014922-70014941 | None:intergenic | 40.0% | |
| CTCCCACATATTCTAGATGA+GGG | + | chr5.4:70015730-70015749 | None:intergenic | 40.0% | |
| CTTTGAATACTACATGGTGC+AGG | + | chr5.4:70014417-70014436 | None:intergenic | 40.0% | |
| GAAATAGAGGAAAATGGGAG+GGG | + | chr5.4:70012592-70012611 | None:intergenic | 40.0% | |
| GAAGAAAACTGAGACGATAG+AGG | + | chr5.4:70014555-70014574 | None:intergenic | 40.0% | |
| GAGAGATGCACACTATATGT+TGG | - | chr5.4:70016018-70016037 | MS.gene70831:intron | 40.0% | |
| GAGTAGAAGGGAGATAAAGA+AGG | + | chr5.4:70014218-70014237 | None:intergenic | 40.0% | |
| GATACAAAAGCTGAAGGAAG+AGG | - | chr5.4:70015036-70015055 | MS.gene70831:intron | 40.0% | |
| GATATTCAATAGTGCTCCTC+TGG | - | chr5.4:70013660-70013679 | MS.gene70831:intron | 40.0% | |
| GATGTGGCAATATGTTCAAG+AGG | + | chr5.4:70014503-70014522 | None:intergenic | 40.0% | |
| GGAAATGCTTGAGATAGTCA+TGG | - | chr5.4:70011837-70011856 | MS.gene70831:CDS | 40.0% | |
| GGGAAGAATACATAGAGATG+TGG | + | chr5.4:70014519-70014538 | None:intergenic | 40.0% | |
| GTAGAGTTGCTCGTATTCAA+AGG | - | chr5.4:70015058-70015077 | MS.gene70831:intron | 40.0% | |
| TAATGGAGGCTGTTTAATGC+TGG | - | chr5.4:70015494-70015513 | MS.gene70831:intron | 40.0% | |
| TACGGGTACGTTTAGCAAAA+TGG | - | chr5.4:70013188-70013207 | MS.gene70831:intron | 40.0% | |
| TACTAAACCTCCTCATTTGG+GGG | + | chr5.4:70012538-70012557 | None:intergenic | 40.0% | |
| TCATTATGTTAGTACGGGCA+TGG | - | chr5.4:70014236-70014255 | MS.gene70831:intron | 40.0% | |
| TCCCACATATTCTAGATGAG+GGG | + | chr5.4:70015729-70015748 | None:intergenic | 40.0% | |
| TGACTTGAGAAGTCGATGTT+TGG | - | chr5.4:70015544-70015563 | MS.gene70831:intron | 40.0% | |
| TGCACACTATATGTTGGGAT+TGG | - | chr5.4:70016024-70016043 | MS.gene70831:intron | 40.0% | |
| TGGAGCTGAACCAAATTCTA+CGG | - | chr5.4:70014152-70014171 | MS.gene70831:intron | 40.0% | |
| TTAAAGGTTGGGTACAGTTG+CGG | + | chr5.4:70013098-70013117 | None:intergenic | 40.0% | |
| TTGTTGTAGAGGTTGAGAGA+AGG | - | chr5.4:70015088-70015107 | MS.gene70831:intron | 40.0% | |
| ! | ATCCCCTCATCTAGAATATG+TGG | - | chr5.4:70015724-70015743 | MS.gene70831:intron | 40.0% |
| ! | GGGATTGGTACTTTATAGCT+TGG | - | chr5.4:70016039-70016058 | MS.gene70831:intron | 40.0% |
| ! | TCCCCTCATCTAGAATATGT+GGG | - | chr5.4:70015725-70015744 | MS.gene70831:intron | 40.0% |
| !! | AAGCAGCAGTTCTAGAACAT+AGG | - | chr5.4:70012827-70012846 | MS.gene70831:intron | 40.0% |
| !! | CCAATTACTTTTGATGGGAG+TGG | - | chr5.4:70012054-70012073 | MS.gene70831:intron | 40.0% |
| !! | TAAGGCTTTGTTTGCGAGTT+TGG | - | chr5.4:70012276-70012295 | MS.gene70831:intron | 40.0% |
| !! | TAGGTTGTTTTGCCTTTGCT+GGG | + | chr5.4:70013825-70013844 | None:intergenic | 40.0% |
| !! | TTAGCAGTAGCTTGGTTTTC+TGG | - | chr5.4:70011998-70012017 | MS.gene70831:intron | 40.0% |
| !! | TTAGGCTTTGTTTGCGAGTT+TGG | + | chr5.4:70013250-70013269 | None:intergenic | 40.0% |
| !!! | TATTTTGGTCAGTGCAATGC+TGG | - | chr5.4:70014132-70014151 | MS.gene70831:intron | 40.0% |
| !!! | TTATATTGGAGGGTTTTGGG+GGG | + | chr5.4:70012505-70012524 | None:intergenic | 40.0% |
| AAACCTTCTCAATGGAGAGC+TGG | - | chr5.4:70013568-70013587 | MS.gene70831:intron | 45.0% | |
| ACAGGTTCAGAAGCTGAAAC+TGG | - | chr5.4:70014036-70014055 | MS.gene70831:intron | 45.0% | |
| AGAAGGGAGATAAAGAAGGC+AGG | + | chr5.4:70014214-70014233 | None:intergenic | 45.0% | |
| AGTCATGGACAGGTGATTGA+GGG | - | chr5.4:70011852-70011871 | MS.gene70831:CDS | 45.0% | |
| ATGGGAAGGCTTGGGAAAAA+AGG | + | chr5.4:70012630-70012649 | None:intergenic | 45.0% | |
| CCTATTTATCGACCCAGCAA+AGG | - | chr5.4:70013810-70013829 | MS.gene70831:intron | 45.0% | |
| CCTTTGCTGGGTCGATAAAT+AGG | + | chr5.4:70013813-70013832 | None:intergenic | 45.0% | |
| CGATGTCACAGCGAACTATT+GGG | + | chr5.4:70015815-70015834 | None:intergenic | 45.0% | |
| CTCAAGCATTTCCTGATCTG+AGG | + | chr5.4:70011830-70011849 | None:intergenic | 45.0% | |
| CTTGGATCGCCTATACAGTT+CGG | - | chr5.4:70016057-70016076 | MS.gene70831:intron | 45.0% | |
| GAGTTGCTCGTATTCAAAGG+AGG | - | chr5.4:70015061-70015080 | MS.gene70831:intron | 45.0% | |
| GATAGAGGAACTACAGGTGA+AGG | + | chr5.4:70014540-70014559 | None:intergenic | 45.0% | |
| GCTTTCAGTGAGCAGACAAA+GGG | - | chr5.4:70011784-70011803 | MS.gene70831:CDS | 45.0% | |
| GGAGCTGAACCAAATTCTAC+GGG | - | chr5.4:70014153-70014172 | MS.gene70831:intron | 45.0% | |
| GTACTGCAGTGGTACTTGAA+GGG | + | chr5.4:70013076-70013095 | None:intergenic | 45.0% | |
| TAGTCATGGACAGGTGATTG+AGG | - | chr5.4:70011851-70011870 | MS.gene70831:CDS | 45.0% | |
| TCGAGGGGTGGAAAATATGA+GGG | - | chr5.4:70012320-70012339 | MS.gene70831:intron | 45.0% | |
| TCGATGTCACAGCGAACTAT+TGG | + | chr5.4:70015816-70015835 | None:intergenic | 45.0% | |
| TGAGACGATAGAGGAACTAC+AGG | + | chr5.4:70014546-70014565 | None:intergenic | 45.0% | |
| TGCAAGAATACTCATGACGG+TGG | - | chr5.4:70015227-70015246 | MS.gene70831:intron | 45.0% | |
| TGCTTGAGATAGTCATGGAC+AGG | - | chr5.4:70011842-70011861 | MS.gene70831:CDS | 45.0% | |
| TGTGCATCTCTCTCCTGTAA+CGG | + | chr5.4:70016010-70016029 | None:intergenic | 45.0% | |
| TGTGGAAAACTGTTCACTCC+CGG | + | chr5.4:70011952-70011971 | None:intergenic | 45.0% | |
| TTCACTTAAACCCGCAGACT+TGG | + | chr5.4:70014933-70014952 | None:intergenic | 45.0% | |
| TTCGAGGGGTGGAAAATATG+AGG | - | chr5.4:70012319-70012338 | MS.gene70831:intron | 45.0% | |
| TTGTGTGAAGTTTGCAGTCC+AGG | + | chr5.4:70016268-70016287 | None:intergenic | 45.0% | |
| TTTGCTAAACGTACCCGTAC+CGG | + | chr5.4:70013187-70013206 | None:intergenic | 45.0% | |
| ! | AACAAAGGTACGGGTACGTT+AGG | - | chr5.4:70012724-70012743 | MS.gene70831:intron | 45.0% |
| ! | CATTTAAGGCCTTGGGTTGT+GGG | - | chr5.4:70012191-70012210 | MS.gene70831:intron | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | - | chr5.4:70012281-70012300 | MS.gene70831:intron | 45.0% |
| ! | CTTTGTTTGCGAGTTTGGAG+GGG | + | chr5.4:70012300-70012281 | None:intergenic | 45.0% |
| ! | TCGATGGCATTTAAGGCCTT+GGG | - | chr5.4:70012184-70012203 | MS.gene70831:intron | 45.0% |
| ! | TTCGATGGCATTTAAGGCCT+TGG | - | chr5.4:70012183-70012202 | MS.gene70831:intron | 45.0% |
| ! | TTTAGTTCCCCCAAATGAGG+AGG | - | chr5.4:70012528-70012547 | MS.gene70831:intron | 45.0% |
| !! | AAGGAGGCTACTTGTTGTAG+AGG | - | chr5.4:70015077-70015096 | MS.gene70831:intron | 45.0% |
| !! | CTAGGTTGTTTTGCCTTTGC+TGG | + | chr5.4:70013826-70013845 | None:intergenic | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | - | chr5.4:70012280-70012299 | MS.gene70831:intron | 45.0% |
| !! | GCTTTGTTTGCGAGTTTGGA+GGG | + | chr5.4:70012299-70012280 | None:intergenic | 45.0% |
| !!! | AGCGTTTTGGGGGTTTTAGA+GGG | + | chr5.4:70012476-70012495 | None:intergenic | 45.0% |
| !!! | TATTAGTTTTATTATTTATT+AGG | + | chr5.4:70013949-70013968 | None:intergenic | 5.0% |
| AGTACGGGCATGGTTCAAAC+AGG | - | chr5.4:70014246-70014265 | MS.gene70831:intron | 50.0% | |
| ATAGAGGAAAATGGGAGGGG+AGG | + | chr5.4:70012589-70012608 | None:intergenic | 50.0% | |
| CAATAGTGCTCCTCTGGACA+GGG | - | chr5.4:70013666-70013685 | MS.gene70831:intron | 50.0% | |
| CTCTAGTTACCCACAACCCA+AGG | + | chr5.4:70012203-70012222 | None:intergenic | 50.0% | |
| GCCTATACAGTTCGGTCAAG+AGG | - | chr5.4:70016065-70016084 | MS.gene70831:intron | 50.0% | |
| GCCTCTTGACCGAACTGTAT+AGG | + | chr5.4:70016069-70016088 | None:intergenic | 50.0% | |
| GGCTTTCAGTGAGCAGACAA+AGG | - | chr5.4:70011783-70011802 | MS.gene70831:CDS | 50.0% | |
| GGTACTGCAGTGGTACTTGA+AGG | + | chr5.4:70013077-70013096 | None:intergenic | 50.0% | |
| TAGAGGAAAATGGGAGGGGA+GGG | + | chr5.4:70012588-70012607 | None:intergenic | 50.0% | |
| TCAATAGTGCTCCTCTGGAC+AGG | - | chr5.4:70013665-70013684 | MS.gene70831:intron | 50.0% | |
| TCCAACGCCCCAAAATACCA+GGG | + | chr5.4:70016180-70016199 | None:intergenic | 50.0% | |
| TCCAGTGAATGCCTCAGATC+AGG | - | chr5.4:70011816-70011835 | MS.gene70831:CDS | 50.0% | |
| TTCTCAATGGAGAGCTGGCT+CGG | - | chr5.4:70013573-70013592 | MS.gene70831:intron | 50.0% | |
| TTGCTAAACGTACCCGTACC+GGG | + | chr5.4:70013186-70013205 | None:intergenic | 50.0% | |
| TTTGCGAGTTTGGAGGGGAA+GGG | + | chr5.4:70013240-70013259 | None:intergenic | 50.0% | |
| ! | CTTGGGTTGTGGGTAACTAG+AGG | - | chr5.4:70012201-70012220 | MS.gene70831:intron | 50.0% |
| ! | GCATTTAAGGCCTTGGGTTG+TGG | - | chr5.4:70012190-70012209 | MS.gene70831:intron | 50.0% |
| ! | TCCTGATCTGAGGCATTCAC+TGG | + | chr5.4:70011820-70011839 | None:intergenic | 50.0% |
| !! | GAAAGGTGGGGGCATTTAGT+AGG | - | chr5.4:70012804-70012823 | MS.gene70831:intron | 50.0% |
| !! | GATGGGAAGCTCTGAAGCAA+GGG | + | chr5.4:70013218-70013237 | None:intergenic | 50.0% |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | - | chr5.4:70012279-70012298 | MS.gene70831:intron | 50.0% |
| !! | GGCTTTGTTTGCGAGTTTGG+AGG | + | chr5.4:70012298-70012279 | None:intergenic | 50.0% |
| !!! | GAGCGTTTTGGGGGTTTTAG+AGG | + | chr5.4:70012477-70012496 | None:intergenic | 50.0% |
| !!! | GGGGGGTTTTAGAGCGTTTT+GGG | + | chr5.4:70012488-70012507 | None:intergenic | 50.0% |
| !!! | GGGGGTTTTAGAGCGTTTTG+GGG | + | chr5.4:70012487-70012506 | None:intergenic | 50.0% |
| !!! | GGGGTTTTAGAGCGTTTTGG+GGG | + | chr5.4:70012486-70012505 | None:intergenic | 50.0% |
| !!! | TGGGGGGTTTTAGAGCGTTT+TGG | + | chr5.4:70012489-70012508 | None:intergenic | 50.0% |
| AAAATGGGAGGGGAGGGCTT+TGG | + | chr5.4:70012582-70012601 | None:intergenic | 55.0% | |
| AAATGGGAGGGGAGGGCTTT+GGG | + | chr5.4:70012581-70012600 | None:intergenic | 55.0% | |
| AGGGGAAGGGAAGACTTCGA+GGG | - | chr5.4:70012304-70012323 | MS.gene70831:intron | 55.0% | |
| CAACGCAGATGGGAAGGCTT+GGG | + | chr5.4:70012638-70012657 | None:intergenic | 55.0% | |
| CTCCAACGCCCCAAAATACC+AGG | + | chr5.4:70016181-70016200 | None:intergenic | 55.0% | |
| GAGCCAGCTCTCCATTGAGA+AGG | + | chr5.4:70013574-70013593 | None:intergenic | 55.0% | |
| GAGTTTGGAGGGGAAGGGAT+GGG | + | chr5.4:70013235-70013254 | None:intergenic | 55.0% | |
| GGCTCGGGCTATGCTTATTC+AGG | - | chr5.4:70013589-70013608 | MS.gene70831:intron | 55.0% | |
| GTACAGTTGCGGTACTGCAG+TGG | + | chr5.4:70013087-70013106 | None:intergenic | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+AGG | + | chr5.4:70012304-70012285 | None:intergenic | 55.0% | |
| GTTTGCGAGTTTGGAGGGGA+GGG | - | chr5.4:70012285-70012304 | MS.gene70831:intron | 55.0% | |
| TGTTTGCGAGTTTGGAGGGG+AGG | - | chr5.4:70012284-70012303 | MS.gene70831:intron | 55.0% | |
| TTTGCGAGTTTGGAGGGGAG+GGG | - | chr5.4:70012286-70012305 | MS.gene70831:intron | 55.0% | |
| ! | AAGAGGCACGCAGAAGCTTC+TGG | - | chr5.4:70016082-70016101 | MS.gene70831:intron | 55.0% |
| ! | AAGCTTCTGGAGAGTGGCAG+TGG | - | chr5.4:70016095-70016114 | MS.gene70831:intron | 55.0% |
| ! | ACGCAGAAGCTTCTGGAGAG+TGG | - | chr5.4:70016089-70016108 | MS.gene70831:intron | 55.0% |
| ! | TCTCAATGGAGAGCTGGCTC+GGG | - | chr5.4:70013574-70013593 | MS.gene70831:intron | 55.0% |
| !! | GGATGGGAAGCTCTGAAGCA+AGG | + | chr5.4:70013219-70013238 | None:intergenic | 55.0% |
| !! | TTGATGGGAGTGGGCTGTGA+AGG | - | chr5.4:70012064-70012083 | MS.gene70831:intron | 55.0% |
| !!! | TCCCTGGTATTTTGGGGCGT+TGG | - | chr5.4:70016176-70016195 | MS.gene70831:intron | 55.0% |
| AATGGGAGGGGAGGGCTTTG+GGG | + | chr5.4:70012580-70012599 | None:intergenic | 60.0% | |
| CCTTCCCATCTGCGTTGCAC+GGG | - | chr5.4:70012641-70012660 | MS.gene70831:intron | 60.0% | |
| CGAGTTTGGAGGGGAAGGGA+TGG | + | chr5.4:70013236-70013255 | None:intergenic | 60.0% | |
| GAAGGGAAGACTTCGAGGGG+TGG | - | chr5.4:70012308-70012327 | MS.gene70831:intron | 60.0% | |
| GAGGGGAAGGGAAGACTTCG+AGG | - | chr5.4:70012303-70012322 | MS.gene70831:intron | 60.0% | |
| GAGTTTGGAGGGGAGGGGAA+GGG | - | chr5.4:70012291-70012310 | MS.gene70831:intron | 60.0% | |
| GCAACGCAGATGGGAAGGCT+TGG | + | chr5.4:70012639-70012658 | None:intergenic | 60.0% | |
| GCCTTCCCATCTGCGTTGCA+CGG | - | chr5.4:70012640-70012659 | MS.gene70831:intron | 60.0% | |
| GGGGAAGGGAAGACTTCGAG+GGG | - | chr5.4:70012305-70012324 | MS.gene70831:intron | 60.0% | |
| TACGGTACCCGGTACGGGTA+CGG | - | chr5.4:70012670-70012689 | MS.gene70831:intron | 60.0% | |
| ACCAGTACCCGCGCAGTACC+CGG | - | chr5.4:70013165-70013184 | MS.gene70831:intron | 65.0% | |
| ACGGTACCCGGTACGGGTAC+GGG | - | chr5.4:70012671-70012690 | MS.gene70831:intron | 65.0% | |
| CATCTGCGTTGCACGGGTGC+GGG | - | chr5.4:70012647-70012666 | MS.gene70831:intron | 65.0% | |
| CCATCTGCGTTGCACGGGTG+CGG | - | chr5.4:70012646-70012665 | MS.gene70831:intron | 65.0% | |
| CCCGTGCAACGCAGATGGGA+AGG | + | chr5.4:70012644-70012663 | None:intergenic | 65.0% | |
| CGAGTTTGGAGGGGAGGGGA+AGG | - | chr5.4:70012290-70012309 | MS.gene70831:intron | 65.0% | |
| CGCACCCGTGCAACGCAGAT+GGG | + | chr5.4:70012648-70012667 | None:intergenic | 65.0% | |
| TACCCGCGCAGTACCCGGTA+CGG | - | chr5.4:70013170-70013189 | MS.gene70831:intron | 65.0% | |
| TGCGGGTACGGTACCCGGTA+CGG | - | chr5.4:70012664-70012683 | MS.gene70831:intron | 65.0% | |
| ! | ATGGGAGGGGAGGGCTTTGG+GGG | + | chr5.4:70012579-70012598 | None:intergenic | 65.0% |
| ! | TACCCGTACCGGGTACTGCG+CGG | + | chr5.4:70013176-70013195 | None:intergenic | 65.0% |
| !! | CAGGGGAGTACCCTGTCCAG+AGG | + | chr5.4:70013679-70013698 | None:intergenic | 65.0% |
| ACCCGCACCCGTACCCGTAC+CGG | + | chr5.4:70012681-70012700 | None:intergenic | 70.0% | |
| ACCCGCGCAGTACCCGGTAC+GGG | - | chr5.4:70013171-70013190 | MS.gene70831:intron | 70.0% | |
| ACCCGGTACGGGTACGGGTG+CGG | - | chr5.4:70012676-70012695 | MS.gene70831:intron | 70.0% | |
| ACGGGTGCGGGTACGGTACC+CGG | - | chr5.4:70012659-70012678 | MS.gene70831:intron | 70.0% | |
| CCGCACCCGTGCAACGCAGA+TGG | + | chr5.4:70012649-70012668 | None:intergenic | 70.0% | |
| GCGGGTACGGTACCCGGTAC+GGG | - | chr5.4:70012665-70012684 | MS.gene70831:intron | 70.0% | |
| GCGTTGCACGGGTGCGGGTA+CGG | - | chr5.4:70012652-70012671 | MS.gene70831:intron | 70.0% | |
| ! | ACCCGTACCGGGTACTGCGC+GGG | + | chr5.4:70013175-70013194 | None:intergenic | 70.0% |
| ! | ACCGGGTACTGCGCGGGTAC+TGG | + | chr5.4:70013169-70013188 | None:intergenic | 70.0% |
| !! | TGGGAGGGGAGGGCTTTGGG+GGG | + | chr5.4:70012578-70012597 | None:intergenic | 70.0% |
| CCCGCACCCGTACCCGTACC+GGG | + | chr5.4:70012680-70012699 | None:intergenic | 75.0% | |
| CCCGGTACGGGTACGGGTGC+GGG | - | chr5.4:70012677-70012696 | MS.gene70831:intron | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr5.4 | gene | 70011775 | 70016352 | 70011775 | ID=MS.gene70831 |
| chr5.4 | mRNA | 70011775 | 70016352 | 70011775 | ID=MS.gene70831.t1;Parent=MS.gene70831 |
| chr5.4 | exon | 70016264 | 70016352 | 70016264 | ID=MS.gene70831.t1.exon1;Parent=MS.gene70831.t1 |
| chr5.4 | CDS | 70016264 | 70016352 | 70016264 | ID=cds.MS.gene70831.t1;Parent=MS.gene70831.t1 |
| chr5.4 | exon | 70014517 | 70014589 | 70014517 | ID=MS.gene70831.t1.exon2;Parent=MS.gene70831.t1 |
| chr5.4 | CDS | 70014517 | 70014589 | 70014517 | ID=cds.MS.gene70831.t1;Parent=MS.gene70831.t1 |
| chr5.4 | exon | 70014059 | 70014087 | 70014059 | ID=MS.gene70831.t1.exon3;Parent=MS.gene70831.t1 |
| chr5.4 | CDS | 70014059 | 70014087 | 70014059 | ID=cds.MS.gene70831.t1;Parent=MS.gene70831.t1 |
| chr5.4 | exon | 70013860 | 70013983 | 70013860 | ID=MS.gene70831.t1.exon4;Parent=MS.gene70831.t1 |
| chr5.4 | CDS | 70013860 | 70013983 | 70013860 | ID=cds.MS.gene70831.t1;Parent=MS.gene70831.t1 |
| chr5.4 | exon | 70012981 | 70013091 | 70012981 | ID=MS.gene70831.t1.exon5;Parent=MS.gene70831.t1 |
| chr5.4 | CDS | 70012981 | 70013091 | 70012981 | ID=cds.MS.gene70831.t1;Parent=MS.gene70831.t1 |
| chr5.4 | exon | 70012011 | 70012070 | 70012011 | ID=MS.gene70831.t1.exon6;Parent=MS.gene70831.t1 |
| chr5.4 | CDS | 70012011 | 70012070 | 70012011 | ID=cds.MS.gene70831.t1;Parent=MS.gene70831.t1 |
| chr5.4 | exon | 70011775 | 70011883 | 70011775 | ID=MS.gene70831.t1.exon7;Parent=MS.gene70831.t1 |
| chr5.4 | CDS | 70011775 | 70011883 | 70011775 | ID=cds.MS.gene70831.t1;Parent=MS.gene70831.t1 |
| Gene Sequence |
| Protein sequence |
