Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71028.t1 | XP_003590173.2 | 99.4 | 798 | 5 | 0 | 1 | 798 | 1 | 798 | 0.00E+00 | 1319.7 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71028.t1 | O23052 | 77.7 | 806 | 170 | 5 | 1 | 798 | 1 | 804 | 3.0e-294 | 1012.3 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71028.t1 | G7I6P0 | 99.4 | 798 | 5 | 0 | 1 | 798 | 1 | 798 | 0.0e+00 | 1319.7 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|
PPI:
| Gene1 | Gene2 | Type |
|---|---|---|
| MS.gene71028 | MS.gene002687 | PPI |
| MS.gene71028 | MS.gene002070 | PPI |
| MS.gene71028 | MS.gene004367 | PPI |
| MS.gene71028 | MS.gene067862 | PPI |
| MS.gene047176 | MS.gene71028 | PPI |
| MS.gene71028 | MS.gene072035 | PPI |
| MS.gene71028 | MS.gene00644 | PPI |
| MS.gene71028 | MS.gene05802 | PPI |
| MS.gene71028 | MS.gene41781 | PPI |
| MS.gene71028 | MS.gene08159 | PPI |
| MS.gene71028 | MS.gene042471 | PPI |
| MS.gene43594 | MS.gene71028 | PPI |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71028.t1 | MTR_1g045490 | 99.373 | 798 | 5 | 0 | 1 | 798 | 1 | 798 | 0.0 | 1643 |
| MS.gene71028.t1 | MTR_1g079510 | 23.411 | 299 | 196 | 2 | 201 | 473 | 140 | 431 | 2.39e-12 | 71.2 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71028.t1 | AT1G05150 | 77.086 | 803 | 174 | 5 | 1 | 795 | 1 | 801 | 0.0 | 1312 |
| MS.gene71028.t1 | AT2G32450 | 77.000 | 800 | 174 | 6 | 1 | 795 | 1 | 795 | 0.0 | 1296 |
| MS.gene71028.t1 | AT3G04240 | 26.506 | 249 | 168 | 3 | 201 | 449 | 131 | 364 | 2.44e-13 | 74.7 |
| MS.gene71028.t1 | AT3G04240 | 22.846 | 267 | 180 | 2 | 233 | 473 | 88 | 354 | 6.00e-12 | 70.1 |
| MS.gene71028.t1 | AT3G04240 | 23.715 | 253 | 161 | 4 | 233 | 473 | 190 | 422 | 4.74e-11 | 67.0 |
Find 200 sgRNAs with CRISPR-Local
Find 232 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TATTATCGGTTCACGCTTTA+AGG | 0.124950 | 1.4:+29704515 | MS.gene71028:CDS |
| AGAAAGAATCCTCTCATTTA+TGG | 0.127070 | 1.4:-29704100 | None:intergenic |
| ATTGATGCTCTTTATAATTT+AGG | 0.139271 | 1.4:+29703529 | MS.gene71028:CDS |
| GATGATCCAGATTGGGGTTT+TGG | 0.192976 | 1.4:+29704411 | MS.gene71028:CDS |
| TAATTTAGGTGGATTGTATA+TGG | 0.219261 | 1.4:+29703543 | MS.gene71028:CDS |
| GCAGGAAGAGTACAGATTTA+AGG | 0.228301 | 1.4:+29704605 | MS.gene71028:CDS |
| GTATGAACATCAATTGTTTA+AGG | 0.249934 | 1.4:+29703027 | MS.gene71028:CDS |
| AAGCATTGAAAATGACAAAT+AGG | 0.254087 | 1.4:+29703707 | MS.gene71028:CDS |
| TGAGAGGATTCTTTCTGTTT+TGG | 0.256631 | 1.4:+29704107 | MS.gene71028:CDS |
| TTAAAGCGTGAACCGATAAT+AGG | 0.267402 | 1.4:-29704513 | None:intergenic |
| TTTCTTCCAAGTTCGGTTTC+CGG | 0.269538 | 1.4:-29704020 | None:intergenic |
| TTCGGATAAGAGAGTGGTTT+GGG | 0.272199 | 1.4:+29702883 | MS.gene71028:CDS |
| GAGTACAGATTTAAGGAGTA+TGG | 0.280282 | 1.4:+29704612 | MS.gene71028:CDS |
| GCTAAAGATGGGAAAGTTAA+AGG | 0.283071 | 1.4:+29702797 | MS.gene71028:CDS |
| TGAGTGCTTGTGAGTATTAT+AGG | 0.285254 | 1.4:+29703275 | MS.gene71028:CDS |
| TGCTGGTTGGTCTCGCGAAT+TGG | 0.301878 | 1.4:+29702844 | MS.gene71028:CDS |
| GCTGGTTGGTCTCGCGAATT+GGG | 0.304388 | 1.4:+29702845 | MS.gene71028:CDS |
| CATCATGATTCGCGTCGAAT+TGG | 0.309699 | 1.4:-29702349 | None:intergenic |
| GCAAGTACACTTATCTTTCA+TGG | 0.311003 | 1.4:-29704649 | None:intergenic |
| GGTAATTGTTATTATGTTCT+TGG | 0.314765 | 1.4:+29703118 | MS.gene71028:CDS |
| TGAGATGTATACGAGAGTTT+TGG | 0.329243 | 1.4:+29703591 | MS.gene71028:CDS |
| GAGTGCTTGTGAGTATTATA+GGG | 0.332729 | 1.4:+29703276 | MS.gene71028:CDS |
| GGGGCCTTCGACTGAGATTT+CGG | 0.342250 | 1.4:+29702865 | MS.gene71028:CDS |
| CGTTAACCTTGGTATTTCAT+TGG | 0.351194 | 1.4:+29703234 | MS.gene71028:CDS |
| CCAGATACATCCAGTTGTTA+AGG | 0.351923 | 1.4:+29704289 | MS.gene71028:CDS |
| CTCTGGAGGACCACCACAAA+TGG | 0.355655 | 1.4:-29704184 | None:intergenic |
| GATGTGCCGGTGTCGTATTC+TGG | 0.361458 | 1.4:+29703973 | MS.gene71028:CDS |
| TTATGTTCTTGGAAGGTATA+AGG | 0.364044 | 1.4:+29703129 | MS.gene71028:CDS |
| TAAGGCTCCTGCGCCGGATT+CGG | 0.366628 | 1.4:+29702610 | MS.gene71028:CDS |
| TTTCGGATAAGAGAGTGGTT+TGG | 0.368094 | 1.4:+29702882 | MS.gene71028:CDS |
| ATTAGCACCGTCTTCGTTCA+TGG | 0.368955 | 1.4:-29704247 | None:intergenic |
| CCAAGGTGTTAGCGAATTGA+TGG | 0.371774 | 1.4:+29704329 | MS.gene71028:CDS |
| TGGCTGTGTGGCCGAATCAT+TGG | 0.382968 | 1.4:+29703611 | MS.gene71028:CDS |
| CCTTAACAACTGGATGTATC+TGG | 0.383500 | 1.4:-29704289 | None:intergenic |
| CGAAGAATTTCTTCCAAGTT+CGG | 0.385586 | 1.4:-29704027 | None:intergenic |
| GCTATTCTTGCTCCCATTTG+TGG | 0.391363 | 1.4:+29704171 | MS.gene71028:CDS |
| ATGACAAATGGCGATTCTTC+CGG | 0.395230 | 1.4:-29703802 | None:intergenic |
| TATGTTTGATGATCCAGATT+GGG | 0.395444 | 1.4:+29704404 | MS.gene71028:CDS |
| CATAAACAGCCCTTAACAAC+TGG | 0.401595 | 1.4:-29704299 | None:intergenic |
| ATGGTGCTGGTGATGTTGAT+AGG | 0.403408 | 1.4:+29702543 | MS.gene71028:CDS |
| GGAATATAAGGCTGCTGTTA+AGG | 0.403774 | 1.4:+29703369 | MS.gene71028:CDS |
| TTTAGAGCTTTGAAACTGTT+AGG | 0.403876 | 1.4:+29703325 | MS.gene71028:CDS |
| GAACAAGGCTGTGTCGTTGC+TGG | 0.409634 | 1.4:+29703645 | MS.gene71028:CDS |
| ACAGCTCCTTGAAAAGTGTC+TGG | 0.414755 | 1.4:-29704072 | None:intergenic |
| ACCTATGCTGAATTCATAGA+TGG | 0.417029 | 1.4:+29702476 | MS.gene71028:CDS |
| AAGAACATAATAACAATTAC+CGG | 0.417448 | 1.4:-29703116 | None:intergenic |
| GTCCTCCAGAGAGACGTAAA+AGG | 0.418171 | 1.4:+29704196 | MS.gene71028:CDS |
| AACTGCGCCCGCCAATGATT+CGG | 0.418538 | 1.4:-29703622 | None:intergenic |
| AATTGCAACCTGTTGATGTT+AGG | 0.419007 | 1.4:+29703080 | MS.gene71028:CDS |
| GACGACGAAGCCTCCGAATC+CGG | 0.424113 | 1.4:-29702623 | None:intergenic |
| TTTGATGCCTATTCTGATGC+TGG | 0.425129 | 1.4:+29702827 | MS.gene71028:CDS |
| GAAGGCTATTGATTTGAAAC+CGG | 0.425202 | 1.4:+29703501 | MS.gene71028:CDS |
| ACCTTAGTGAAGCTTGAAAC+AGG | 0.426443 | 1.4:+29704444 | MS.gene71028:CDS |
| TGCACATTGTGATCTGGCTT+CGG | 0.426766 | 1.4:+29703432 | MS.gene71028:CDS |
| TAAAGCGTGAACCGATAATA+GGG | 0.428075 | 1.4:-29704512 | None:intergenic |
| TGCTGATGCACATTGTGATC+TGG | 0.428424 | 1.4:+29703426 | MS.gene71028:CDS |
| AGGTGGATTGTATATGGACT+TGG | 0.432754 | 1.4:+29703549 | MS.gene71028:CDS |
| GCACTTGAAGCTGCTGAGGC+TGG | 0.432831 | 1.4:+29703175 | MS.gene71028:CDS |
| TCGTCGCACCTTCTCCGATC+TGG | 0.433820 | 1.4:-29702318 | None:intergenic |
| AAATGAGGCCTAACATCAAC+AGG | 0.435494 | 1.4:-29703088 | None:intergenic |
| CTGAGGCTGGTGGAAATCAA+TGG | 0.435659 | 1.4:+29703188 | MS.gene71028:CDS |
| ATCCATCCGGAAACCGAACT+TGG | 0.438061 | 1.4:+29704014 | MS.gene71028:CDS |
| CAGATACATCCAGTTGTTAA+GGG | 0.440498 | 1.4:+29704290 | MS.gene71028:CDS |
| GCTGTGTCGTTGCTGGGAGC+TGG | 0.440564 | 1.4:+29703652 | MS.gene71028:CDS |
| TCTTCCTGCTTAAATGTAGA+AGG | 0.441960 | 1.4:-29704591 | None:intergenic |
| ATCATGATTCGCGTCGAATT+GGG | 0.445997 | 1.4:-29702348 | None:intergenic |
| GTGTGCCGCTACCCTATTAT+CGG | 0.446048 | 1.4:+29704501 | MS.gene71028:CDS |
| TTTGATGGACATATGGCAAT+TGG | 0.447629 | 1.4:+29702995 | MS.gene71028:CDS |
| GAAGAAATGGCGTCGCTTGT+TGG | 0.450116 | 1.4:+29702386 | MS.gene71028:CDS |
| AGAGTGGTTTGGGATGAATC+AGG | 0.453698 | 1.4:+29702893 | MS.gene71028:CDS |
| AGCATTGAAAATGACAAATA+GGG | 0.458819 | 1.4:+29703708 | MS.gene71028:CDS |
| TTCATTGGAAGGTGAAGGTA+TGG | 0.460120 | 1.4:+29703249 | MS.gene71028:CDS |
| GGTTCAGGCAGATTAGATCT+TGG | 0.460339 | 1.4:+29704138 | MS.gene71028:CDS |
| AGTTCTCAAAAGACCCTCAT+AGG | 0.463697 | 1.4:-29702513 | None:intergenic |
| CATCAATTCGCTAACACCTT+GGG | 0.469273 | 1.4:-29704328 | None:intergenic |
| ATCACCAACTGTCTTAAACT+TGG | 0.470600 | 1.4:-29703836 | None:intergenic |
| TAATGTTGATGAGGCTGGTA+AGG | 0.476974 | 1.4:+29702592 | MS.gene71028:CDS |
| AAAAGAAGAACAAACCCAAT+GGG | 0.477510 | 1.4:+29703773 | MS.gene71028:CDS |
| TTAGCACCGTCTTCGTTCAT+GGG | 0.478305 | 1.4:-29704246 | None:intergenic |
| GATTGTATATGGACTTGGGT+AGG | 0.484500 | 1.4:+29703554 | MS.gene71028:CDS |
| TGGGCAGTGTCGCCGAATCA+TGG | 0.484609 | 1.4:+29702701 | MS.gene71028:CDS |
| GAAGCAGCGGACAGCTGCGT+GGG | 0.488728 | 1.4:+29702682 | MS.gene71028:CDS |
| TCTTCCGGAGTATCCCCATT+GGG | 0.488844 | 1.4:-29703787 | None:intergenic |
| CTTGCTTTAACTTGCAATCA+CGG | 0.490282 | 1.4:+29704667 | MS.gene71028:CDS |
| GCTGTTTATGTTCCTTCCCA+AGG | 0.490782 | 1.4:+29704312 | MS.gene71028:CDS |
| TGAGAGGGGTTTGACCTATG+AGG | 0.492063 | 1.4:+29702499 | MS.gene71028:CDS |
| TCCTGTTTCAAGCTTCACTA+AGG | 0.493440 | 1.4:-29704445 | None:intergenic |
| AACCTTGGTATTTCATTGGA+AGG | 0.494888 | 1.4:+29703238 | MS.gene71028:CDS |
| CCATCAATTCGCTAACACCT+TGG | 0.498413 | 1.4:-29704329 | None:intergenic |
| ATAATACCAAAACCCCAATC+TGG | 0.499632 | 1.4:-29704417 | None:intergenic |
| GGCTGGTAAGGCTCCTGCGC+CGG | 0.501904 | 1.4:+29702604 | MS.gene71028:CDS |
| AGACCAACCAGCATCAGAAT+AGG | 0.503456 | 1.4:-29702834 | None:intergenic |
| TTGTTGGTGCTGTAAACCCT+AGG | 0.505292 | 1.4:+29702402 | MS.gene71028:CDS |
| TGCTCTGATTTGCAGAGCAC+TGG | 0.505293 | 1.4:-29703884 | None:intergenic |
| GGGTTTGAATAGGGAAGAAA+TGG | 0.505358 | 1.4:+29702373 | MS.gene71028:CDS |
| TCATCGCTGAATTTCACCCT+AGG | 0.505804 | 1.4:-29702419 | None:intergenic |
| TATACATCTCAGAAGCCCTC+TGG | 0.506094 | 1.4:-29703579 | None:intergenic |
| AGTGCCTTCTACATTTAAGC+AGG | 0.506565 | 1.4:+29704587 | MS.gene71028:CDS |
| ATTTAAGGAGTATGGAAATG+AGG | 0.508497 | 1.4:+29704620 | MS.gene71028:CDS |
| ATTGTTATTATGTTCTTGGA+AGG | 0.509069 | 1.4:+29703122 | MS.gene71028:CDS |
| CATCGCTGAATTTCACCCTA+GGG | 0.509482 | 1.4:-29702418 | None:intergenic |
| GGCTCCTGCGCCGGATTCGG+AGG | 0.510604 | 1.4:+29702613 | MS.gene71028:CDS |
| GTTGGCACTTGAAGCTGCTG+AGG | 0.511145 | 1.4:+29703171 | MS.gene71028:CDS |
| CAATTCGACGCGAATCATGA+TGG | 0.511494 | 1.4:+29702350 | MS.gene71028:CDS |
| TTCCAAGTTCGGTTTCCGGA+TGG | 0.512298 | 1.4:-29704016 | None:intergenic |
| AAGTTGAAGCAAGCTAAAGA+TGG | 0.512508 | 1.4:+29702785 | MS.gene71028:CDS |
| CTGAATTCATAGATGGTGAG+AGG | 0.512579 | 1.4:+29702483 | MS.gene71028:CDS |
| GATGGTTCAACTATGACAAA+TGG | 0.513195 | 1.4:-29703814 | None:intergenic |
| ATGCCTATTCTGATGCTGGT+TGG | 0.513715 | 1.4:+29702831 | MS.gene71028:CDS |
| CAATGTGCATCAGCATAATC+CGG | 0.513831 | 1.4:-29703418 | None:intergenic |
| CCAACTGTCTTAAACTTGGA+TGG | 0.518220 | 1.4:-29703832 | None:intergenic |
| TCTGGAGGACCACCACAAAT+GGG | 0.519206 | 1.4:-29704183 | None:intergenic |
| CCATCCAAGTTTAAGACAGT+TGG | 0.521392 | 1.4:+29703832 | MS.gene71028:CDS |
| GATGCTCTTTATAATTTAGG+TGG | 0.522580 | 1.4:+29703532 | MS.gene71028:CDS |
| TTCTTCCGGAGTATCCCCAT+TGG | 0.523550 | 1.4:-29703788 | None:intergenic |
| AATTCGACGCGAATCATGAT+GGG | 0.523961 | 1.4:+29702351 | MS.gene71028:CDS |
| TCTTGATCTTAATGTTGATG+AGG | 0.525215 | 1.4:+29702583 | MS.gene71028:CDS |
| AACAAGGCTGTGTCGTTGCT+GGG | 0.526390 | 1.4:+29703646 | MS.gene71028:CDS |
| CCGGTGTCGTATTCTGGTAC+CGG | 0.527238 | 1.4:+29703979 | MS.gene71028:CDS |
| TTATGTTTGATGATCCAGAT+TGG | 0.532134 | 1.4:+29704403 | MS.gene71028:CDS |
| GGTGGATTGTATATGGACTT+GGG | 0.533769 | 1.4:+29703550 | MS.gene71028:CDS |
| CCACAGATTTACGTTAACCT+TGG | 0.534817 | 1.4:+29703223 | MS.gene71028:CDS |
| GTATTCTGGTACCGGAGTGC+CGG | 0.535859 | 1.4:+29703987 | MS.gene71028:CDS |
| TGAGGCTGGTGGAAATCAAT+GGG | 0.536232 | 1.4:+29703189 | MS.gene71028:CDS |
| TCGAACACAATACCATGATT+CGG | 0.538456 | 1.4:-29702713 | None:intergenic |
| ACGCCACAACAGTGCATCAA+AGG | 0.539130 | 1.4:-29704223 | None:intergenic |
| GGTATTTCATTGGAAGGTGA+AGG | 0.539408 | 1.4:+29703244 | MS.gene71028:CDS |
| TGCTGTTAAGGCGCTTGAAG+AGG | 0.540825 | 1.4:+29703381 | MS.gene71028:CDS |
| TTTAAGGAGTATGGAAATGA+GGG | 0.541065 | 1.4:+29704621 | MS.gene71028:CDS |
| GATCTTAATGTTGATGAGGC+TGG | 0.541445 | 1.4:+29702587 | MS.gene71028:CDS |
| GAGAGGGGTTTGACCTATGA+GGG | 0.544066 | 1.4:+29702500 | MS.gene71028:CDS |
| AGCGAATTGATGGAGGTTCG+TGG | 0.549361 | 1.4:+29704339 | MS.gene71028:CDS |
| GAGCACTTCAGAAGGTTGCT+AGG | 0.552630 | 1.4:+29703902 | MS.gene71028:CDS |
| TGGTGCTGGTGATGTTGATA+GGG | 0.553001 | 1.4:+29702544 | MS.gene71028:CDS |
| GAAGCCTCCGAATCCGGCGC+AGG | 0.554195 | 1.4:-29702617 | None:intergenic |
| TGAGGATGAGAGGGCGATTG+AGG | 0.555091 | 1.4:+29703471 | MS.gene71028:CDS |
| TGAACATCAATTGTTTAAGG+AGG | 0.556104 | 1.4:+29703030 | MS.gene71028:CDS |
| TGATAAGACTACTGTGAGGC+AGG | 0.563005 | 1.4:+29703855 | MS.gene71028:CDS |
| AAGGCTATTGATTTGAAACC+GGG | 0.563307 | 1.4:+29703502 | MS.gene71028:CDS |
| CTGTGTGGCCGAATCATTGG+CGG | 0.563491 | 1.4:+29703614 | MS.gene71028:CDS |
| ATGTTTGATGATCCAGATTG+GGG | 0.563924 | 1.4:+29704405 | MS.gene71028:CDS |
| GTAGCGGCACACTGCGCACA+TGG | 0.564516 | 1.4:-29704490 | None:intergenic |
| GGCGATTGAGGTGTTTCAGA+AGG | 0.565595 | 1.4:+29703483 | MS.gene71028:CDS |
| CTTGAAGCTGCTGAGGCTGG+TGG | 0.566338 | 1.4:+29703178 | MS.gene71028:CDS |
| AGAACTTATGATGATGGTGC+TGG | 0.568989 | 1.4:+29702530 | MS.gene71028:CDS |
| AGTTGAAGCAAGCTAAAGAT+GGG | 0.572882 | 1.4:+29702786 | MS.gene71028:CDS |
| CAATTACCGGCTCTAAAATG+AGG | 0.573747 | 1.4:-29703103 | None:intergenic |
| ATTCTTGCTCCCATTTGTGG+TGG | 0.574006 | 1.4:+29704174 | MS.gene71028:CDS |
| AAGAGGCACCAGATCGGAGA+AGG | 0.575767 | 1.4:+29702310 | MS.gene71028:CDS |
| TGTGTGGCCGAATCATTGGC+GGG | 0.581219 | 1.4:+29703615 | MS.gene71028:CDS |
| GCAAATCAGAGCACTTCAGA+AGG | 0.581238 | 1.4:+29703894 | MS.gene71028:CDS |
| TTGGCGGGCGCAGTTGAACA+AGG | 0.581691 | 1.4:+29703630 | MS.gene71028:CDS |
| CGTCGTCGATTGTTGATGAG+AGG | 0.586246 | 1.4:+29702639 | MS.gene71028:CDS |
| GGCTTTGATTAGTTTCAAGA+GGG | 0.586536 | 1.4:+29703051 | MS.gene71028:CDS |
| CAAACCCAATGGGGATACTC+CGG | 0.586605 | 1.4:+29703783 | MS.gene71028:CDS |
| TGGAGACGTAGACACTTCAA+TGG | 0.586995 | 1.4:+29704359 | MS.gene71028:CDS |
| AGGCTTTGATTAGTTTCAAG+AGG | 0.587245 | 1.4:+29703050 | MS.gene71028:CDS |
| AAGTTGAAAATGGCGACAAG+AGG | 0.588366 | 1.4:+29702293 | None:intergenic |
| GTCGATTGTTGATGAGAGGA+TGG | 0.588641 | 1.4:+29702643 | MS.gene71028:CDS |
| GAGTGGTTTGGGATGAATCA+GGG | 0.590750 | 1.4:+29702894 | MS.gene71028:CDS |
| CTGGTTGGTCTCGCGAATTG+GGG | 0.593676 | 1.4:+29702846 | MS.gene71028:CDS |
| GGCTTTGCATGCTATGCGTG+AGG | 0.593677 | 1.4:+29703453 | MS.gene71028:CDS |
| TGAGATTTCGGATAAGAGAG+TGG | 0.596774 | 1.4:+29702877 | MS.gene71028:CDS |
| AGAAGCAGCGGACAGCTGCG+TGG | 0.598942 | 1.4:+29702681 | MS.gene71028:CDS |
| TCGCCTTTGATGCACTGTTG+TGG | 0.602680 | 1.4:+29704220 | MS.gene71028:CDS |
| CACCTTCCAATGAAATACCA+AGG | 0.606948 | 1.4:-29703240 | None:intergenic |
| TGCTATGCGTGAGGATGAGA+GGG | 0.607406 | 1.4:+29703462 | MS.gene71028:CDS |
| TGAATTCATAGATGGTGAGA+GGG | 0.610821 | 1.4:+29702484 | MS.gene71028:CDS |
| GTTTCAAGCTTCACTAAGGT+AGG | 0.614099 | 1.4:-29704441 | None:intergenic |
| ATGCTATGCGTGAGGATGAG+AGG | 0.621923 | 1.4:+29703461 | MS.gene71028:CDS |
| AATGAGCGAACATGATGTGC+CGG | 0.625733 | 1.4:+29703960 | MS.gene71028:CDS |
| GGCGACAAGAGGCACCAGAT+CGG | 0.627503 | 1.4:+29702304 | MS.gene71028:CDS |
| TTATCCGAAATCTCAGTCGA+AGG | 0.627881 | 1.4:-29702869 | None:intergenic |
| TGGCGTCCCATGAACGAAGA+CGG | 0.628298 | 1.4:+29704240 | MS.gene71028:CDS |
| TGGACTTGGGTAGGTTCCAG+AGG | 0.630541 | 1.4:+29703563 | MS.gene71028:CDS |
| TTCAAAGCTCTAAAATGCGT+AGG | 0.630809 | 1.4:-29703316 | None:intergenic |
| GGACTTGGGTAGGTTCCAGA+GGG | 0.631626 | 1.4:+29703564 | MS.gene71028:CDS |
| AATCAACGCAATTCTCGATG+AGG | 0.631687 | 1.4:+29702445 | MS.gene71028:CDS |
| TGTAACCAATGCTACAGCGA+AGG | 0.633386 | 1.4:+29704561 | MS.gene71028:CDS |
| TGGAAGGTATAAGGAAGCGA+AGG | 0.636944 | 1.4:+29703138 | MS.gene71028:CDS |
| AGGTGTTAGCGAATTGATGG+AGG | 0.638521 | 1.4:+29704332 | MS.gene71028:CDS |
| TGTTGGTGCTGTAAACCCTA+GGG | 0.640534 | 1.4:+29702403 | MS.gene71028:CDS |
| CTGTGAAAGCCATAAATGAG+AGG | 0.642882 | 1.4:+29704091 | MS.gene71028:CDS |
| TAAAGAGCATCAATATGACC+CGG | 0.642930 | 1.4:-29703520 | None:intergenic |
| CCAAGGTTAACGTAAATCTG+TGG | 0.646831 | 1.4:-29703223 | None:intergenic |
| ACCATCTATGAATTCAGCAT+AGG | 0.650178 | 1.4:-29702477 | None:intergenic |
| TAGGTTGAGTCGTTGTAATG+TGG | 0.652395 | 1.4:+29703921 | MS.gene71028:CDS |
| ATTCGACGCGAATCATGATG+GGG | 0.660251 | 1.4:+29702352 | MS.gene71028:CDS |
| GAATTCATAGATGGTGAGAG+GGG | 0.664471 | 1.4:+29702485 | MS.gene71028:CDS |
| GTGAACCGATAATAGGGTAG+CGG | 0.667482 | 1.4:-29704506 | None:intergenic |
| TTGAGTCACAGAAGAAGCAG+CGG | 0.680651 | 1.4:+29702669 | MS.gene71028:CDS |
| TTCGACGCGAATCATGATGG+GGG | 0.686689 | 1.4:+29702353 | MS.gene71028:CDS |
| AATTCGCTAACACCTTGGGA+AGG | 0.689041 | 1.4:-29704324 | None:intergenic |
| AAAGAAGAACAAACCCAATG+GGG | 0.692654 | 1.4:+29703774 | MS.gene71028:CDS |
| GTATTGTGTTCGATGAGACG+TGG | 0.719449 | 1.4:+29702723 | MS.gene71028:CDS |
| CCGGTACCAGAATACGACAC+CGG | 0.720876 | 1.4:-29703979 | None:intergenic |
| ACAGGAGATAGAAACCGACA+TGG | 0.728698 | 1.4:+29704462 | MS.gene71028:CDS |
| TGCTTGTGAGTATTATAGGG+AGG | 0.742573 | 1.4:+29703279 | MS.gene71028:CDS |
| GATTGTTGATGAGAGGATGG+CGG | 0.753142 | 1.4:+29702646 | MS.gene71028:CDS |
| TTGGTGATAAGACTACTGTG+AGG | 0.814181 | 1.4:+29703851 | MS.gene71028:CDS |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AAGAACATAATAACAATTAC+CGG | - | chr1.4:29703119-29703138 | None:intergenic | 20.0% |
| !! | ATTGATGCTCTTTATAATTT+AGG | + | chr1.4:29703529-29703548 | MS.gene71028:CDS | 20.0% |
| !!! | ATTTAGAGATTTTGATAAAG+AGG | + | chr1.4:29702759-29702778 | MS.gene71028:CDS | 20.0% |
| ! | GTATGAACATCAATTGTTTA+AGG | + | chr1.4:29703027-29703046 | MS.gene71028:CDS | 25.0% |
| !! | AGCATTGAAAATGACAAATA+GGG | + | chr1.4:29703708-29703727 | MS.gene71028:CDS | 25.0% |
| !! | ATTGTTATTATGTTCTTGGA+AGG | + | chr1.4:29703122-29703141 | MS.gene71028:CDS | 25.0% |
| !! | GGTAATTGTTATTATGTTCT+TGG | + | chr1.4:29703118-29703137 | MS.gene71028:CDS | 25.0% |
| !!! | AAGCATTGAAAATGACAAAT+AGG | + | chr1.4:29703707-29703726 | MS.gene71028:CDS | 25.0% |
| !!! | TAATTTAGGTGGATTGTATA+TGG | + | chr1.4:29703543-29703562 | MS.gene71028:CDS | 25.0% |
| AAAAAGAAGAACAAACCCAA+TGG | + | chr1.4:29703772-29703791 | MS.gene71028:CDS | 30.0% | |
| AAAAGAAGAACAAACCCAAT+GGG | + | chr1.4:29703773-29703792 | MS.gene71028:CDS | 30.0% | |
| AGAAAGAATCCTCTCATTTA+TGG | - | chr1.4:29704103-29704122 | None:intergenic | 30.0% | |
| GATGCTCTTTATAATTTAGG+TGG | + | chr1.4:29703532-29703551 | MS.gene71028:CDS | 30.0% | |
| TCTTGATCTTAATGTTGATG+AGG | + | chr1.4:29702583-29702602 | MS.gene71028:CDS | 30.0% | |
| TGAACATCAATTGTTTAAGG+AGG | + | chr1.4:29703030-29703049 | MS.gene71028:CDS | 30.0% | |
| ! | ATTTAAGGAGTATGGAAATG+AGG | + | chr1.4:29704620-29704639 | MS.gene71028:CDS | 30.0% |
| ! | TATGTTTGATGATCCAGATT+GGG | + | chr1.4:29704404-29704423 | MS.gene71028:CDS | 30.0% |
| ! | TTATGTTCTTGGAAGGTATA+AGG | + | chr1.4:29703129-29703148 | MS.gene71028:CDS | 30.0% |
| ! | TTATGTTTGATGATCCAGAT+TGG | + | chr1.4:29704403-29704422 | MS.gene71028:CDS | 30.0% |
| ! | TTTAAGGAGTATGGAAATGA+GGG | + | chr1.4:29704621-29704640 | MS.gene71028:CDS | 30.0% |
| !! | CTTTTGAGAACTTATGATGA+TGG | + | chr1.4:29702524-29702543 | MS.gene71028:CDS | 30.0% |
| !! | TAATGTGGAGCTTTTGAAAA+AGG | + | chr1.4:29703936-29703955 | MS.gene71028:CDS | 30.0% |
| !! | TTTAGAGCTTTGAAACTGTT+AGG | + | chr1.4:29703325-29703344 | MS.gene71028:CDS | 30.0% |
| !!! | TGATTATGCTGTTTTTGTGA+AGG | + | chr1.4:29702919-29702938 | MS.gene71028:CDS | 30.0% |
| AAAGAAGAACAAACCCAATG+GGG | + | chr1.4:29703774-29703793 | MS.gene71028:CDS | 35.0% | |
| AACCTTGGTATTTCATTGGA+AGG | + | chr1.4:29703238-29703257 | MS.gene71028:CDS | 35.0% | |
| AAGTTGAAGCAAGCTAAAGA+TGG | + | chr1.4:29702785-29702804 | MS.gene71028:CDS | 35.0% | |
| AATTGCAACCTGTTGATGTT+AGG | + | chr1.4:29703080-29703099 | MS.gene71028:CDS | 35.0% | |
| ACCATCTATGAATTCAGCAT+AGG | - | chr1.4:29702480-29702499 | None:intergenic | 35.0% | |
| ACCTATGCTGAATTCATAGA+TGG | + | chr1.4:29702476-29702495 | MS.gene71028:CDS | 35.0% | |
| AGTTGAAGCAAGCTAAAGAT+GGG | + | chr1.4:29702786-29702805 | MS.gene71028:CDS | 35.0% | |
| ATAATACCAAAACCCCAATC+TGG | - | chr1.4:29704420-29704439 | None:intergenic | 35.0% | |
| ATCACCAACTGTCTTAAACT+TGG | - | chr1.4:29703839-29703858 | None:intergenic | 35.0% | |
| CAGATACATCCAGTTGTTAA+GGG | + | chr1.4:29704290-29704309 | MS.gene71028:CDS | 35.0% | |
| CGAAGAATTTCTTCCAAGTT+CGG | - | chr1.4:29704030-29704049 | None:intergenic | 35.0% | |
| CGTTAACCTTGGTATTTCAT+TGG | + | chr1.4:29703234-29703253 | MS.gene71028:CDS | 35.0% | |
| GAGTACAGATTTAAGGAGTA+TGG | + | chr1.4:29704612-29704631 | MS.gene71028:CDS | 35.0% | |
| GAGTGCTTGTGAGTATTATA+GGG | + | chr1.4:29703276-29703295 | MS.gene71028:CDS | 35.0% | |
| GATGGTTCAACTATGACAAA+TGG | - | chr1.4:29703817-29703836 | None:intergenic | 35.0% | |
| GCAAGTACACTTATCTTTCA+TGG | - | chr1.4:29704652-29704671 | None:intergenic | 35.0% | |
| GCTAAAGATGGGAAAGTTAA+AGG | + | chr1.4:29702797-29702816 | MS.gene71028:CDS | 35.0% | |
| TAAAGCGTGAACCGATAATA+GGG | - | chr1.4:29704515-29704534 | None:intergenic | 35.0% | |
| TCGAACACAATACCATGATT+CGG | - | chr1.4:29702716-29702735 | None:intergenic | 35.0% | |
| TCTTCCTGCTTAAATGTAGA+AGG | - | chr1.4:29704594-29704613 | None:intergenic | 35.0% | |
| TGAATTCATAGATGGTGAGA+GGG | + | chr1.4:29702484-29702503 | MS.gene71028:CDS | 35.0% | |
| TGAGTGCTTGTGAGTATTAT+AGG | + | chr1.4:29703275-29703294 | MS.gene71028:CDS | 35.0% | |
| TTAAAGCGTGAACCGATAAT+AGG | - | chr1.4:29704516-29704535 | None:intergenic | 35.0% | |
| ! | AGAAGCCAAAAAAGCTTTGA+AGG | + | chr1.4:29703684-29703703 | MS.gene71028:CDS | 35.0% |
| ! | ATGTTTGATGATCCAGATTG+GGG | + | chr1.4:29704405-29704424 | MS.gene71028:CDS | 35.0% |
| ! | TCAAGAGAAGAAGCTTTTGA+TGG | + | chr1.4:29702980-29702999 | MS.gene71028:CDS | 35.0% |
| ! | TGAGAGGATTCTTTCTGTTT+TGG | + | chr1.4:29704107-29704126 | MS.gene71028:CDS | 35.0% |
| ! | TGAGATGTATACGAGAGTTT+TGG | + | chr1.4:29703591-29703610 | MS.gene71028:CDS | 35.0% |
| ! | TTTGATGGACATATGGCAAT+TGG | + | chr1.4:29702995-29703014 | MS.gene71028:CDS | 35.0% |
| !! | AAGGCTATTGATTTGAAACC+GGG | + | chr1.4:29703502-29703521 | MS.gene71028:CDS | 35.0% |
| !! | AGAAGCTTTTGATGGACATA+TGG | + | chr1.4:29702988-29703007 | MS.gene71028:CDS | 35.0% |
| !! | AGAGGCTATTTTCATGAAAC+CGG | + | chr1.4:29703399-29703418 | MS.gene71028:CDS | 35.0% |
| !! | AGGCTTTGATTAGTTTCAAG+AGG | + | chr1.4:29703050-29703069 | MS.gene71028:CDS | 35.0% |
| !! | CTTGCTTTAACTTGCAATCA+CGG | + | chr1.4:29704667-29704686 | MS.gene71028:CDS | 35.0% |
| !! | CTTTCTGTTTTGGATGAAAG+TGG | + | chr1.4:29704117-29704136 | MS.gene71028:CDS | 35.0% |
| !! | GAAGGCTATTGATTTGAAAC+CGG | + | chr1.4:29703501-29703520 | MS.gene71028:CDS | 35.0% |
| !! | GGCTTTGATTAGTTTCAAGA+GGG | + | chr1.4:29703051-29703070 | MS.gene71028:CDS | 35.0% |
| !! | TAAAGAGCATCAATATGACC+CGG | - | chr1.4:29703523-29703542 | None:intergenic | 35.0% |
| !! | TATTATCGGTTCACGCTTTA+AGG | + | chr1.4:29704515-29704534 | MS.gene71028:CDS | 35.0% |
| !! | TTCAAAGCTCTAAAATGCGT+AGG | - | chr1.4:29703319-29703338 | None:intergenic | 35.0% |
| !!! | TGCTTCCTTCAAAGCTTTTT+TGG | - | chr1.4:29703692-29703711 | None:intergenic | 35.0% |
| AAATGAGGCCTAACATCAAC+AGG | - | chr1.4:29703091-29703110 | None:intergenic | 40.0% | |
| AATCAACGCAATTCTCGATG+AGG | + | chr1.4:29702445-29702464 | MS.gene71028:CDS | 40.0% | |
| AATTCGACGCGAATCATGAT+GGG | + | chr1.4:29702351-29702370 | MS.gene71028:CDS | 40.0% | |
| ACCTTAGTGAAGCTTGAAAC+AGG | + | chr1.4:29704444-29704463 | MS.gene71028:CDS | 40.0% | |
| AGTGCCTTCTACATTTAAGC+AGG | + | chr1.4:29704587-29704606 | MS.gene71028:CDS | 40.0% | |
| AGTTCTCAAAAGACCCTCAT+AGG | - | chr1.4:29702516-29702535 | None:intergenic | 40.0% | |
| ATCATGATTCGCGTCGAATT+GGG | - | chr1.4:29702351-29702370 | None:intergenic | 40.0% | |
| ATGACAAATGGCGATTCTTC+CGG | - | chr1.4:29703805-29703824 | None:intergenic | 40.0% | |
| CAATGTGCATCAGCATAATC+CGG | - | chr1.4:29703421-29703440 | None:intergenic | 40.0% | |
| CACCTTCCAATGAAATACCA+AGG | - | chr1.4:29703243-29703262 | None:intergenic | 40.0% | |
| CATAAACAGCCCTTAACAAC+TGG | - | chr1.4:29704302-29704321 | None:intergenic | 40.0% | |
| CATCAATTCGCTAACACCTT+GGG | - | chr1.4:29704331-29704350 | None:intergenic | 40.0% | |
| CCAACTGTCTTAAACTTGGA+TGG | - | chr1.4:29703835-29703854 | None:intergenic | 40.0% | |
| CCAAGGTTAACGTAAATCTG+TGG | - | chr1.4:29703226-29703245 | None:intergenic | 40.0% | |
| CCACAGATTTACGTTAACCT+TGG | + | chr1.4:29703223-29703242 | MS.gene71028:CDS | 40.0% | |
| CCAGATACATCCAGTTGTTA+AGG | + | chr1.4:29704289-29704308 | MS.gene71028:CDS | 40.0% | |
| CCTTAACAACTGGATGTATC+TGG | - | chr1.4:29704292-29704311 | None:intergenic | 40.0% | |
| CTGAATTCATAGATGGTGAG+AGG | + | chr1.4:29702483-29702502 | MS.gene71028:CDS | 40.0% | |
| CTGTGAAAGCCATAAATGAG+AGG | + | chr1.4:29704091-29704110 | MS.gene71028:CDS | 40.0% | |
| GAATTCATAGATGGTGAGAG+GGG | + | chr1.4:29702485-29702504 | MS.gene71028:CDS | 40.0% | |
| GATTGTATATGGACTTGGGT+AGG | + | chr1.4:29703554-29703573 | MS.gene71028:CDS | 40.0% | |
| GGAATATAAGGCTGCTGTTA+AGG | + | chr1.4:29703369-29703388 | MS.gene71028:CDS | 40.0% | |
| GGGTTTGAATAGGGAAGAAA+TGG | + | chr1.4:29702373-29702392 | MS.gene71028:CDS | 40.0% | |
| GGTATTTCATTGGAAGGTGA+AGG | + | chr1.4:29703244-29703263 | MS.gene71028:CDS | 40.0% | |
| GTTTCAAGCTTCACTAAGGT+AGG | - | chr1.4:29704444-29704463 | None:intergenic | 40.0% | |
| TCCTGTTTCAAGCTTCACTA+AGG | - | chr1.4:29704448-29704467 | None:intergenic | 40.0% | |
| TGAGATTTCGGATAAGAGAG+TGG | + | chr1.4:29702877-29702896 | MS.gene71028:CDS | 40.0% | |
| TGCTTGTGAGTATTATAGGG+AGG | + | chr1.4:29703279-29703298 | MS.gene71028:CDS | 40.0% | |
| TTATCCGAAATCTCAGTCGA+AGG | - | chr1.4:29702872-29702891 | None:intergenic | 40.0% | |
| TTCATTGGAAGGTGAAGGTA+TGG | + | chr1.4:29703249-29703268 | MS.gene71028:CDS | 40.0% | |
| TTCGGATAAGAGAGTGGTTT+GGG | + | chr1.4:29702883-29702902 | MS.gene71028:CDS | 40.0% | |
| TTTCGGATAAGAGAGTGGTT+TGG | + | chr1.4:29702882-29702901 | MS.gene71028:CDS | 40.0% | |
| TTTCTTCCAAGTTCGGTTTC+CGG | - | chr1.4:29704023-29704042 | None:intergenic | 40.0% | |
| TTTGATGCCTATTCTGATGC+TGG | + | chr1.4:29702827-29702846 | MS.gene71028:CDS | 40.0% | |
| ! | AGCGAAGGAAGAGTTTTTGT+TGG | + | chr1.4:29703153-29703172 | MS.gene71028:CDS | 40.0% |
| ! | ATCATGATGGGGGTTTGAAT+AGG | + | chr1.4:29702363-29702382 | MS.gene71028:CDS | 40.0% |
| ! | CCATCCAAGTTTAAGACAGT+TGG | + | chr1.4:29703832-29703851 | MS.gene71028:CDS | 40.0% |
| ! | CTGTTAGGTAGTGCTCTTTT+TGG | + | chr1.4:29703340-29703359 | MS.gene71028:CDS | 40.0% |
| ! | GATCTTAATGTTGATGAGGC+TGG | + | chr1.4:29702587-29702606 | MS.gene71028:CDS | 40.0% |
| ! | GCAGGAAGAGTACAGATTTA+AGG | + | chr1.4:29704605-29704624 | MS.gene71028:CDS | 40.0% |
| ! | TAATGTTGATGAGGCTGGTA+AGG | + | chr1.4:29702592-29702611 | MS.gene71028:CDS | 40.0% |
| ! | TAGGTTGAGTCGTTGTAATG+TGG | + | chr1.4:29703921-29703940 | MS.gene71028:CDS | 40.0% |
| ! | TCATGATGGGGGTTTGAATA+GGG | + | chr1.4:29702364-29702383 | MS.gene71028:CDS | 40.0% |
| ! | TTGGTGATAAGACTACTGTG+AGG | + | chr1.4:29703851-29703870 | MS.gene71028:CDS | 40.0% |
| ! | TTTTGGCGTAGGGGAATATA+AGG | + | chr1.4:29703357-29703376 | MS.gene71028:CDS | 40.0% |
| !! | AGAACTTATGATGATGGTGC+TGG | + | chr1.4:29702530-29702549 | MS.gene71028:CDS | 40.0% |
| !! | AGGTGGATTGTATATGGACT+TGG | + | chr1.4:29703549-29703568 | MS.gene71028:CDS | 40.0% |
| !! | CAATTACCGGCTCTAAAATG+AGG | - | chr1.4:29703106-29703125 | None:intergenic | 40.0% |
| !! | GGTGGATTGTATATGGACTT+GGG | + | chr1.4:29703550-29703569 | MS.gene71028:CDS | 40.0% |
| !! | GTTTTGGATGAAAGTGGTTC+AGG | + | chr1.4:29704123-29704142 | MS.gene71028:CDS | 40.0% |
| !!! | GCTGTTTTTGTGAAGGAAGT+GGG | + | chr1.4:29702926-29702945 | MS.gene71028:CDS | 40.0% |
| !!! | TGCTGTTTTTGTGAAGGAAG+TGG | + | chr1.4:29702925-29702944 | MS.gene71028:CDS | 40.0% |
| AATGAGCGAACATGATGTGC+CGG | + | chr1.4:29703960-29703979 | MS.gene71028:CDS | 45.0% | |
| AATTCGCTAACACCTTGGGA+AGG | - | chr1.4:29704327-29704346 | None:intergenic | 45.0% | |
| ACAGGAGATAGAAACCGACA+TGG | + | chr1.4:29704462-29704481 | MS.gene71028:CDS | 45.0% | |
| AGACCAACCAGCATCAGAAT+AGG | - | chr1.4:29702837-29702856 | None:intergenic | 45.0% | |
| AGGTGTTAGCGAATTGATGG+AGG | + | chr1.4:29704332-29704351 | MS.gene71028:CDS | 45.0% | |
| ATGCCTATTCTGATGCTGGT+TGG | + | chr1.4:29702831-29702850 | MS.gene71028:CDS | 45.0% | |
| ATTAGCACCGTCTTCGTTCA+TGG | - | chr1.4:29704250-29704269 | None:intergenic | 45.0% | |
| ATTCGACGCGAATCATGATG+GGG | + | chr1.4:29702352-29702371 | MS.gene71028:CDS | 45.0% | |
| ATTCTTGCTCCCATTTGTGG+TGG | + | chr1.4:29704174-29704193 | MS.gene71028:CDS | 45.0% | |
| CAATTCGACGCGAATCATGA+TGG | + | chr1.4:29702350-29702369 | MS.gene71028:CDS | 45.0% | |
| CATCATGATTCGCGTCGAAT+TGG | - | chr1.4:29702352-29702371 | None:intergenic | 45.0% | |
| CATCGCTGAATTTCACCCTA+GGG | - | chr1.4:29702421-29702440 | None:intergenic | 45.0% | |
| CCATCAATTCGCTAACACCT+TGG | - | chr1.4:29704332-29704351 | None:intergenic | 45.0% | |
| GCTATTCTTGCTCCCATTTG+TGG | + | chr1.4:29704171-29704190 | MS.gene71028:CDS | 45.0% | |
| GCTGTTTATGTTCCTTCCCA+AGG | + | chr1.4:29704312-29704331 | MS.gene71028:CDS | 45.0% | |
| GGTTCAGGCAGATTAGATCT+TGG | + | chr1.4:29704138-29704157 | MS.gene71028:CDS | 45.0% | |
| GTATTGTGTTCGATGAGACG+TGG | + | chr1.4:29702723-29702742 | MS.gene71028:CDS | 45.0% | |
| GTGAACCGATAATAGGGTAG+CGG | - | chr1.4:29704509-29704528 | None:intergenic | 45.0% | |
| TATACATCTCAGAAGCCCTC+TGG | - | chr1.4:29703582-29703601 | None:intergenic | 45.0% | |
| TCATCGCTGAATTTCACCCT+AGG | - | chr1.4:29702422-29702441 | None:intergenic | 45.0% | |
| TGAGGCTGGTGGAAATCAAT+GGG | + | chr1.4:29703189-29703208 | MS.gene71028:CDS | 45.0% | |
| TGATAAGACTACTGTGAGGC+AGG | + | chr1.4:29703855-29703874 | MS.gene71028:CDS | 45.0% | |
| TGCTGATGCACATTGTGATC+TGG | + | chr1.4:29703426-29703445 | MS.gene71028:CDS | 45.0% | |
| TGGAGACGTAGACACTTCAA+TGG | + | chr1.4:29704359-29704378 | MS.gene71028:CDS | 45.0% | |
| TGTAACCAATGCTACAGCGA+AGG | + | chr1.4:29704561-29704580 | MS.gene71028:CDS | 45.0% | |
| TTAGCACCGTCTTCGTTCAT+GGG | - | chr1.4:29704249-29704268 | None:intergenic | 45.0% | |
| TTGAGTCACAGAAGAAGCAG+CGG | + | chr1.4:29702669-29702688 | MS.gene71028:CDS | 45.0% | |
| ! | AGAGTGGTTTGGGATGAATC+AGG | + | chr1.4:29702893-29702912 | MS.gene71028:CDS | 45.0% |
| ! | ATCCTTTTACGTCTCTCTGG+AGG | - | chr1.4:29704201-29704220 | None:intergenic | 45.0% |
| ! | CCAAGGTGTTAGCGAATTGA+TGG | + | chr1.4:29704329-29704348 | MS.gene71028:CDS | 45.0% |
| ! | CTGAAGCCAGACACTTTTCA+AGG | + | chr1.4:29704066-29704085 | MS.gene71028:CDS | 45.0% |
| ! | CTTTTCCTTCGCTGTAGCAT+TGG | - | chr1.4:29704569-29704588 | None:intergenic | 45.0% |
| ! | GAGTGGTTTGGGATGAATCA+GGG | + | chr1.4:29702894-29702913 | MS.gene71028:CDS | 45.0% |
| ! | GATGATCCAGATTGGGGTTT+TGG | + | chr1.4:29704411-29704430 | MS.gene71028:CDS | 45.0% |
| ! | GATTGTTGATGAGAGGATGG+CGG | + | chr1.4:29702646-29702665 | MS.gene71028:CDS | 45.0% |
| ! | GCAAATCAGAGCACTTCAGA+AGG | + | chr1.4:29703894-29703913 | MS.gene71028:CDS | 45.0% |
| ! | GTCGATTGTTGATGAGAGGA+TGG | + | chr1.4:29702643-29702662 | MS.gene71028:CDS | 45.0% |
| ! | GTTTTTGTGAAGGAAGTGGG+TGG | + | chr1.4:29702929-29702948 | MS.gene71028:CDS | 45.0% |
| ! | TGCACATTGTGATCTGGCTT+CGG | + | chr1.4:29703432-29703451 | MS.gene71028:CDS | 45.0% |
| ! | TGGAAGGTATAAGGAAGCGA+AGG | + | chr1.4:29703138-29703157 | MS.gene71028:CDS | 45.0% |
| !! | ACAGCTCCTTGAAAAGTGTC+TGG | - | chr1.4:29704075-29704094 | None:intergenic | 45.0% |
| !! | ATGGTGCTGGTGATGTTGAT+AGG | + | chr1.4:29702543-29702562 | MS.gene71028:CDS | 45.0% |
| !! | GGTTTCCGGATGGATTTTTC+CGG | - | chr1.4:29704009-29704028 | None:intergenic | 45.0% |
| !! | GTAGTGCTCTTTTTGGCGTA+GGG | + | chr1.4:29703347-29703366 | MS.gene71028:CDS | 45.0% |
| !! | TAGTGCTCTTTTTGGCGTAG+GGG | + | chr1.4:29703348-29703367 | MS.gene71028:CDS | 45.0% |
| !! | TGGTGCTGGTGATGTTGATA+GGG | + | chr1.4:29702544-29702563 | MS.gene71028:CDS | 45.0% |
| !! | TGTTGGTGCTGTAAACCCTA+GGG | + | chr1.4:29702403-29702422 | MS.gene71028:CDS | 45.0% |
| !! | TTGTTGGTGCTGTAAACCCT+AGG | + | chr1.4:29702402-29702421 | MS.gene71028:CDS | 45.0% |
| !!! | ATACGAGAGTTTTGGCTGTG+TGG | + | chr1.4:29703599-29703618 | MS.gene71028:CDS | 45.0% |
| !!! | GTTAGGCCTCATTTTAGAGC+CGG | + | chr1.4:29703097-29703116 | MS.gene71028:CDS | 45.0% |
| ACGCCACAACAGTGCATCAA+AGG | - | chr1.4:29704226-29704245 | None:intergenic | 50.0% | |
| AGCGAATTGATGGAGGTTCG+TGG | + | chr1.4:29704339-29704358 | MS.gene71028:CDS | 50.0% | |
| ATCCATCCGGAAACCGAACT+TGG | + | chr1.4:29704014-29704033 | MS.gene71028:CDS | 50.0% | |
| ATGCTATGCGTGAGGATGAG+AGG | + | chr1.4:29703461-29703480 | MS.gene71028:CDS | 50.0% | |
| CAAACCCAATGGGGATACTC+CGG | + | chr1.4:29703783-29703802 | MS.gene71028:CDS | 50.0% | |
| CTGAGGCTGGTGGAAATCAA+TGG | + | chr1.4:29703188-29703207 | MS.gene71028:CDS | 50.0% | |
| GAAGAAATGGCGTCGCTTGT+TGG | + | chr1.4:29702386-29702405 | MS.gene71028:CDS | 50.0% | |
| GAGAGGGGTTTGACCTATGA+GGG | + | chr1.4:29702500-29702519 | MS.gene71028:CDS | 50.0% | |
| GAGCACTTCAGAAGGTTGCT+AGG | + | chr1.4:29703902-29703921 | MS.gene71028:CDS | 50.0% | |
| GTCCTCCAGAGAGACGTAAA+AGG | + | chr1.4:29704196-29704215 | MS.gene71028:CDS | 50.0% | |
| TCGCCTTTGATGCACTGTTG+TGG | + | chr1.4:29704220-29704239 | MS.gene71028:CDS | 50.0% | |
| TCTGGAGGACCACCACAAAT+GGG | - | chr1.4:29704186-29704205 | None:intergenic | 50.0% | |
| TGAGAGGGGTTTGACCTATG+AGG | + | chr1.4:29702499-29702518 | MS.gene71028:CDS | 50.0% | |
| TGCTATGCGTGAGGATGAGA+GGG | + | chr1.4:29703462-29703481 | MS.gene71028:CDS | 50.0% | |
| TTCCAAGTTCGGTTTCCGGA+TGG | - | chr1.4:29704019-29704038 | None:intergenic | 50.0% | |
| TTCGACGCGAATCATGATGG+GGG | + | chr1.4:29702353-29702372 | MS.gene71028:CDS | 50.0% | |
| ! | AACAAGGCTGTGTCGTTGCT+GGG | + | chr1.4:29703646-29703665 | MS.gene71028:CDS | 50.0% |
| ! | CGTCGTCGATTGTTGATGAG+AGG | + | chr1.4:29702639-29702658 | MS.gene71028:CDS | 50.0% |
| ! | GCGATCCTTTTACGTCTCTC+TGG | - | chr1.4:29704204-29704223 | None:intergenic | 50.0% |
| ! | GGCGATTGAGGTGTTTCAGA+AGG | + | chr1.4:29703483-29703502 | MS.gene71028:CDS | 50.0% |
| ! | GTGTGCCGCTACCCTATTAT+CGG | + | chr1.4:29704501-29704520 | MS.gene71028:CDS | 50.0% |
| ! | TCTTCCGGAGTATCCCCATT+GGG | - | chr1.4:29703790-29703809 | None:intergenic | 50.0% |
| ! | TGCTCTGATTTGCAGAGCAC+TGG | - | chr1.4:29703887-29703906 | None:intergenic | 50.0% |
| ! | TGCTGTTAAGGCGCTTGAAG+AGG | + | chr1.4:29703381-29703400 | MS.gene71028:CDS | 50.0% |
| ! | TTCTTCCGGAGTATCCCCAT+TGG | - | chr1.4:29703791-29703810 | None:intergenic | 50.0% |
| !! | CGCACATGGTTTTGCCATGT+CGG | - | chr1.4:29704479-29704498 | None:intergenic | 50.0% |
| !! | GAGTGCCGGAAAAATCCATC+CGG | + | chr1.4:29704001-29704020 | MS.gene71028:CDS | 50.0% |
| !! | GATGGATTTTTCCGGCACTC+CGG | - | chr1.4:29704001-29704020 | None:intergenic | 50.0% |
| !! | GGTAGTGCTCTTTTTGGCGT+AGG | + | chr1.4:29703346-29703365 | MS.gene71028:CDS | 50.0% |
| AACTGCGCCCGCCAATGATT+CGG | - | chr1.4:29703625-29703644 | None:intergenic | 55.0% | |
| CCGGTACCAGAATACGACAC+CGG | - | chr1.4:29703982-29704001 | None:intergenic | 55.0% | |
| CTGTGTGGCCGAATCATTGG+CGG | + | chr1.4:29703614-29703633 | MS.gene71028:CDS | 55.0% | |
| GGACTTGGGTAGGTTCCAGA+GGG | + | chr1.4:29703564-29703583 | MS.gene71028:CDS | 55.0% | |
| GGCTTTGCATGCTATGCGTG+AGG | + | chr1.4:29703453-29703472 | MS.gene71028:CDS | 55.0% | |
| GGGGCCTTCGACTGAGATTT+CGG | + | chr1.4:29702865-29702884 | MS.gene71028:CDS | 55.0% | |
| GTTGGCACTTGAAGCTGCTG+AGG | + | chr1.4:29703171-29703190 | MS.gene71028:CDS | 55.0% | |
| TGAGGATGAGAGGGCGATTG+AGG | + | chr1.4:29703471-29703490 | MS.gene71028:CDS | 55.0% | |
| TGGACTTGGGTAGGTTCCAG+AGG | + | chr1.4:29703563-29703582 | MS.gene71028:CDS | 55.0% | |
| TGGCGTCCCATGAACGAAGA+CGG | + | chr1.4:29704240-29704259 | MS.gene71028:CDS | 55.0% | |
| TGGCTGTGTGGCCGAATCAT+TGG | + | chr1.4:29703611-29703630 | MS.gene71028:CDS | 55.0% | |
| TGTGTGGCCGAATCATTGGC+GGG | + | chr1.4:29703615-29703634 | MS.gene71028:CDS | 55.0% | |
| ! | CTCTGGAGGACCACCACAAA+TGG | - | chr1.4:29704187-29704206 | None:intergenic | 55.0% |
| ! | GAACAAGGCTGTGTCGTTGC+TGG | + | chr1.4:29703645-29703664 | MS.gene71028:CDS | 55.0% |
| ! | GTATTCTGGTACCGGAGTGC+CGG | + | chr1.4:29703987-29704006 | MS.gene71028:CDS | 55.0% |
| !! | AAGAGGCACCAGATCGGAGA+AGG | + | chr1.4:29702310-29702329 | MS.gene71028:CDS | 55.0% |
| !! | CCGGTGTCGTATTCTGGTAC+CGG | + | chr1.4:29703979-29703998 | MS.gene71028:CDS | 55.0% |
| !! | CTGGTTGGTCTCGCGAATTG+GGG | + | chr1.4:29702846-29702865 | MS.gene71028:CDS | 55.0% |
| !! | GATGTGCCGGTGTCGTATTC+TGG | + | chr1.4:29703973-29703992 | MS.gene71028:CDS | 55.0% |
| !! | GCTGGTTGGTCTCGCGAATT+GGG | + | chr1.4:29702845-29702864 | MS.gene71028:CDS | 55.0% |
| !! | TGCTGGTTGGTCTCGCGAAT+TGG | + | chr1.4:29702844-29702863 | MS.gene71028:CDS | 55.0% |
| CTTGAAGCTGCTGAGGCTGG+TGG | + | chr1.4:29703178-29703197 | MS.gene71028:CDS | 60.0% | |
| GACGACGAAGCCTCCGAATC+CGG | - | chr1.4:29702626-29702645 | None:intergenic | 60.0% | |
| GCACTTGAAGCTGCTGAGGC+TGG | + | chr1.4:29703175-29703194 | MS.gene71028:CDS | 60.0% | |
| TAAGGCTCCTGCGCCGGATT+CGG | + | chr1.4:29702610-29702629 | MS.gene71028:CDS | 60.0% | |
| TCGTCGCACCTTCTCCGATC+TGG | - | chr1.4:29702321-29702340 | None:intergenic | 60.0% | |
| TGGGCAGTGTCGCCGAATCA+TGG | + | chr1.4:29702701-29702720 | MS.gene71028:CDS | 60.0% | |
| ! | TTGGCGGGCGCAGTTGAACA+AGG | + | chr1.4:29703630-29703649 | MS.gene71028:CDS | 60.0% |
| !! | GGCGACAAGAGGCACCAGAT+CGG | + | chr1.4:29702304-29702323 | MS.gene71028:CDS | 60.0% |
| AGAAGCAGCGGACAGCTGCG+TGG | + | chr1.4:29702681-29702700 | MS.gene71028:CDS | 65.0% | |
| GAAGCAGCGGACAGCTGCGT+GGG | + | chr1.4:29702682-29702701 | MS.gene71028:CDS | 65.0% | |
| GTAGCGGCACACTGCGCACA+TGG | - | chr1.4:29704493-29704512 | None:intergenic | 65.0% | |
| ! | GCTGTGTCGTTGCTGGGAGC+TGG | + | chr1.4:29703652-29703671 | MS.gene71028:CDS | 65.0% |
| GAAGCCTCCGAATCCGGCGC+AGG | - | chr1.4:29702620-29702639 | None:intergenic | 70.0% | |
| GGCTGGTAAGGCTCCTGCGC+CGG | + | chr1.4:29702604-29702623 | MS.gene71028:CDS | 70.0% | |
| GGCTCCTGCGCCGGATTCGG+AGG | + | chr1.4:29702613-29702632 | MS.gene71028:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.4 | gene | 29702302 | 29704701 | 29702302 | ID=MS.gene71028 |
| chr1.4 | mRNA | 29702302 | 29704701 | 29702302 | ID=MS.gene71028.t1;Parent=MS.gene71028 |
| chr1.4 | exon | 29702302 | 29704701 | 29702302 | ID=MS.gene71028.t1.exon1;Parent=MS.gene71028.t1 |
| chr1.4 | CDS | 29702302 | 29704701 | 29702302 | ID=cds.MS.gene71028.t1;Parent=MS.gene71028.t1 |
| Gene Sequence |
| Protein sequence |
