Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71221.t1 | PNX97012.1 | 70.4 | 334 | 67 | 2 | 1 | 302 | 1 | 334 | 1.10E-131 | 479.6 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71221.t1 | P52839 | 46.7 | 323 | 141 | 4 | 9 | 302 | 4 | 324 | 2.1e-78 | 293.9 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71221.t1 | A0A2K3N1W7 | 70.4 | 334 | 67 | 2 | 1 | 302 | 1 | 334 | 8.0e-132 | 479.6 |
TFs/TRs:
Gene ID | Type | Classification |
---|
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene71221 | MS.gene53169 | PPI |
MS.gene71221 | MS.gene55382 | PPI |
MS.gene71221 | MS.gene99693 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71221.t1 | MTR_3g435130 | 69.254 | 335 | 69 | 4 | 1 | 302 | 1 | 334 | 4.22e-165 | 462 |
MS.gene71221.t1 | MTR_8g066220 | 68.563 | 334 | 72 | 3 | 1 | 302 | 1 | 333 | 9.85e-164 | 459 |
MS.gene71221.t1 | MTR_8g066210 | 68.563 | 334 | 57 | 4 | 1 | 302 | 1 | 318 | 3.20e-155 | 436 |
MS.gene71221.t1 | MTR_0071s0010 | 63.720 | 328 | 86 | 3 | 8 | 302 | 6 | 333 | 1.45e-148 | 420 |
MS.gene71221.t1 | MTR_3g046670 | 63.720 | 328 | 86 | 3 | 8 | 302 | 6 | 333 | 1.45e-148 | 420 |
MS.gene71221.t1 | MTR_8g066280 | 79.255 | 188 | 11 | 1 | 143 | 302 | 22 | 209 | 3.87e-102 | 298 |
MS.gene71221.t1 | MTR_3g013500 | 46.226 | 318 | 139 | 2 | 17 | 302 | 20 | 337 | 4.59e-98 | 292 |
MS.gene71221.t1 | MTR_7g007710 | 44.969 | 318 | 138 | 5 | 21 | 302 | 16 | 332 | 4.38e-94 | 282 |
MS.gene71221.t1 | MTR_7g007680 | 42.902 | 317 | 141 | 6 | 21 | 302 | 22 | 333 | 1.21e-89 | 272 |
MS.gene71221.t1 | MTR_8g040820 | 43.082 | 318 | 145 | 5 | 21 | 302 | 27 | 344 | 7.01e-89 | 269 |
MS.gene71221.t1 | MTR_8g035720 | 41.888 | 339 | 150 | 6 | 1 | 302 | 78 | 406 | 1.19e-86 | 265 |
MS.gene71221.t1 | MTR_8g040490 | 42.368 | 321 | 150 | 4 | 17 | 302 | 23 | 343 | 2.34e-86 | 264 |
MS.gene71221.t1 | MTR_8g040430 | 41.411 | 326 | 154 | 5 | 14 | 302 | 20 | 345 | 2.54e-83 | 255 |
MS.gene71221.t1 | MTR_8g040520 | 43.849 | 317 | 139 | 6 | 17 | 297 | 23 | 336 | 3.56e-81 | 249 |
MS.gene71221.t1 | MTR_8g041790 | 42.154 | 325 | 138 | 8 | 14 | 302 | 15 | 325 | 1.36e-79 | 244 |
MS.gene71221.t1 | MTR_3g434790 | 63.542 | 192 | 42 | 1 | 139 | 302 | 43 | 234 | 1.08e-76 | 234 |
MS.gene71221.t1 | MTR_3g434790 | 84.211 | 57 | 9 | 0 | 1 | 57 | 1 | 57 | 7.35e-26 | 102 |
MS.gene71221.t1 | MTR_8g014380 | 43.310 | 284 | 117 | 8 | 17 | 280 | 22 | 281 | 2.58e-68 | 214 |
MS.gene71221.t1 | MTR_8g040250 | 39.677 | 310 | 124 | 8 | 25 | 302 | 15 | 293 | 2.42e-67 | 213 |
MS.gene71221.t1 | MTR_8g040820 | 42.857 | 224 | 96 | 4 | 111 | 302 | 22 | 245 | 1.29e-56 | 183 |
MS.gene71221.t1 | MTR_8g040430 | 42.466 | 219 | 94 | 3 | 116 | 302 | 27 | 245 | 1.39e-53 | 175 |
MS.gene71221.t1 | MTR_8g040730 | 48.731 | 197 | 90 | 6 | 57 | 248 | 24 | 214 | 1.53e-47 | 167 |
MS.gene71221.t1 | MTR_8g040730 | 44.872 | 156 | 77 | 4 | 23 | 172 | 343 | 495 | 2.09e-35 | 134 |
MS.gene71221.t1 | MTR_8g066190 | 69.231 | 91 | 18 | 1 | 222 | 302 | 2 | 92 | 1.33e-32 | 116 |
MS.gene71221.t1 | MTR_8g040710 | 40.268 | 149 | 59 | 2 | 174 | 292 | 134 | 282 | 4.70e-28 | 110 |
MS.gene71221.t1 | MTR_8g040315 | 37.692 | 130 | 54 | 2 | 200 | 302 | 3 | 132 | 1.58e-19 | 83.2 |
MS.gene71221.t1 | MTR_8g066200 | 77.778 | 36 | 8 | 0 | 148 | 183 | 25 | 60 | 4.20e-14 | 66.6 |
MS.gene71221.t1 | MTR_8g040410 | 43.662 | 71 | 30 | 1 | 214 | 274 | 75 | 145 | 3.86e-12 | 63.5 |
MS.gene71221.t1 | MTR_8g040410 | 50.000 | 56 | 26 | 1 | 67 | 120 | 25 | 80 | 4.39e-12 | 63.2 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71221.t1 | AT5G07010 | 43.692 | 325 | 148 | 4 | 12 | 302 | 33 | 356 | 1.66e-95 | 286 |
MS.gene71221.t1 | AT2G03760 | 46.440 | 323 | 142 | 5 | 9 | 302 | 4 | 324 | 3.97e-94 | 282 |
MS.gene71221.t1 | AT3G45070 | 46.835 | 316 | 134 | 4 | 20 | 302 | 14 | 328 | 1.21e-91 | 275 |
MS.gene71221.t1 | AT3G45070 | 46.835 | 316 | 134 | 4 | 20 | 302 | 9 | 323 | 1.56e-91 | 275 |
MS.gene71221.t1 | AT3G45070 | 46.835 | 316 | 134 | 4 | 20 | 302 | 41 | 355 | 2.20e-91 | 276 |
MS.gene71221.t1 | AT5G07000 | 43.478 | 322 | 145 | 5 | 17 | 302 | 24 | 344 | 5.67e-89 | 269 |
MS.gene71221.t1 | AT3G45080 | 46.372 | 317 | 135 | 4 | 20 | 302 | 14 | 329 | 1.16e-85 | 260 |
MS.gene71221.t1 | AT2G03770 | 42.284 | 324 | 147 | 3 | 12 | 303 | 8 | 323 | 9.75e-85 | 258 |
MS.gene71221.t1 | AT1G13420 | 45.016 | 311 | 132 | 6 | 26 | 302 | 26 | 331 | 1.73e-79 | 244 |
MS.gene71221.t1 | AT1G28170 | 42.727 | 330 | 151 | 7 | 7 | 302 | 1 | 326 | 1.33e-77 | 239 |
MS.gene71221.t1 | AT2G03750 | 41.486 | 323 | 155 | 5 | 12 | 302 | 30 | 350 | 2.53e-77 | 239 |
MS.gene71221.t1 | AT5G43690 | 41.420 | 338 | 155 | 7 | 1 | 302 | 1 | 331 | 4.02e-77 | 238 |
MS.gene71221.t1 | AT4G26280 | 42.138 | 318 | 132 | 4 | 16 | 299 | 7 | 306 | 3.32e-75 | 233 |
MS.gene71221.t1 | AT1G18590 | 41.401 | 314 | 139 | 7 | 26 | 300 | 34 | 341 | 5.79e-73 | 228 |
MS.gene71221.t1 | AT2G14920 | 40.256 | 313 | 150 | 4 | 26 | 302 | 22 | 333 | 4.04e-71 | 223 |
MS.gene71221.t1 | AT1G74100 | 38.854 | 314 | 147 | 6 | 26 | 300 | 26 | 333 | 3.06e-70 | 221 |
MS.gene71221.t1 | AT2G27570 | 40.461 | 304 | 124 | 4 | 16 | 302 | 10 | 273 | 4.92e-69 | 216 |
MS.gene71221.t1 | AT1G13430 | 38.532 | 327 | 150 | 5 | 26 | 302 | 26 | 351 | 7.12e-69 | 218 |
MS.gene71221.t1 | AT1G74090 | 39.683 | 315 | 143 | 8 | 26 | 300 | 38 | 345 | 1.12e-67 | 215 |
Find 58 sgRNAs with CRISPR-Local
Find 80 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
CCATTCTCTTGTTCCCTTCT+TGG | 0.032882 | 8.3:-36631830 | MS.gene71221:CDS |
TCCATCAATACCAAGGATTT+TGG | 0.169594 | 8.3:-36632029 | MS.gene71221:CDS |
GTTGACTCTTTCACAGAATT+TGG | 0.172783 | 8.3:+36631712 | None:intergenic |
ACCTTTGGATTCTTCTTCTT+TGG | 0.195487 | 8.3:+36631399 | None:intergenic |
TCGTATTCTTGCAAGTATTT+TGG | 0.197192 | 8.3:+36632120 | None:intergenic |
GTATCAATTCCTTGCATTCT+TGG | 0.204814 | 8.3:+36632091 | None:intergenic |
AGCCAAGTGGTACCTGCTTT+TGG | 0.223091 | 8.3:+36631934 | None:intergenic |
CACTATCACTGAAAGTAAAT+TGG | 0.250645 | 8.3:-36631293 | MS.gene71221:CDS |
TGCGAAACAAAAGTGTCTTT+TGG | 0.289441 | 8.3:+36631661 | None:intergenic |
TGTAGAGGTGCGAGTTCTTT+TGG | 0.307639 | 8.3:-36631565 | MS.gene71221:CDS |
CCCACATTGCCATTAGAAAA+AGG | 0.310786 | 8.3:-36632069 | MS.gene71221:CDS |
GGGAGCATGTATTGGGATAT+TGG | 0.323106 | 8.3:-36631534 | MS.gene71221:CDS |
GCCAAAATCCTTGGTATTGA+TGG | 0.341469 | 8.3:+36632028 | None:intergenic |
CTCTCAAAAGCCTCTTCTAA+TGG | 0.341934 | 8.3:+36631592 | None:intergenic |
CAATATCTTTGTCATAATAA+AGG | 0.348160 | 8.3:+36631800 | None:intergenic |
TACTTGCAAGAATACGATTT+AGG | 0.377772 | 8.3:-36632114 | MS.gene71221:CDS |
GAATTTGGCAATAATTCATA+TGG | 0.378063 | 8.3:+36631727 | None:intergenic |
GGGATATTGGAAGGAAAGCT+TGG | 0.445940 | 8.3:-36631521 | MS.gene71221:CDS |
TGCAATCTCCAACTTGGCCT+AGG | 0.445986 | 8.3:+36631353 | None:intergenic |
CAAGAAGGGAACAAGAGAAT+GGG | 0.448312 | 8.3:+36631831 | None:intergenic |
GGGAACAAGAGAATGGGGAT+TGG | 0.451880 | 8.3:+36631837 | None:intergenic |
ATATGTGTAGAGAAGAGTCT+TGG | 0.476489 | 8.3:+36631751 | None:intergenic |
CCAAGAAGGGAACAAGAGAA+TGG | 0.483836 | 8.3:+36631830 | None:intergenic |
GGTGACAATGAGTCGAGATC+GGG | 0.492080 | 8.3:+36631775 | None:intergenic |
AGAAGAAGAATCCAAAGGTA+TGG | 0.503198 | 8.3:-36631395 | MS.gene71221:CDS |
TGTGTAGAGAAGAGTCTTGG+AGG | 0.507788 | 8.3:+36631754 | None:intergenic |
GGATGGTTGTTATGAATGCT+TGG | 0.509541 | 8.3:+36631871 | None:intergenic |
AGTGGTAACTAAGAGAATAT+CGG | 0.530021 | 8.3:+36631957 | None:intergenic |
CTCCAAAAGCAGGTACCACT+TGG | 0.530830 | 8.3:-36631936 | MS.gene71221:CDS |
AGGTGACAATGAGTCGAGAT+CGG | 0.533708 | 8.3:+36631774 | None:intergenic |
TGGGGATTGGAAGTGAGTAA+AGG | 0.540519 | 8.3:+36631850 | None:intergenic |
GTACCACTTGGCTCAAAGCA+TGG | 0.551523 | 8.3:-36631924 | MS.gene71221:CDS |
AAAGCCTCTTCTAATGGAAG+TGG | 0.551607 | 8.3:+36631598 | None:intergenic |
TTGTGGCAAGCCAAAATCCT+TGG | 0.564001 | 8.3:+36632019 | None:intergenic |
ATAAAGGTCATACTCCAAGA+AGG | 0.564290 | 8.3:+36631816 | None:intergenic |
CGATTTAGGCCAAGAATGCA+AGG | 0.571635 | 8.3:-36632100 | MS.gene71221:CDS |
TTAGTTACCACTCCAAAAGC+AGG | 0.574786 | 8.3:-36631946 | MS.gene71221:CDS |
TTTGACAAGATAAAACACCT+TGG | 0.581098 | 8.3:+36631989 | None:intergenic |
GCATGTATTGGGATATTGGA+AGG | 0.583242 | 8.3:-36631530 | MS.gene71221:CDS |
TAAAGGTCATACTCCAAGAA+GGG | 0.588647 | 8.3:+36631817 | None:intergenic |
AAGCTTGGAAAGGCCAGAGA+AGG | 0.595580 | 8.3:-36631506 | MS.gene71221:CDS |
AAGCTAAGAGCACAAAGTAG+AGG | 0.595604 | 8.3:-36631622 | MS.gene71221:CDS |
GAAAGTAAATTGGCTACACA+TGG | 0.597619 | 8.3:-36631283 | MS.gene71221:CDS |
AGGACCACTTCCATTAGAAG+AGG | 0.602220 | 8.3:-36631602 | MS.gene71221:CDS |
GAATGCTTGGATATTTGTTG+CGG | 0.608390 | 8.3:+36631884 | None:intergenic |
TGTGAAAGAGTCAACTTGCA+AGG | 0.618089 | 8.3:-36631704 | MS.gene71221:CDS |
CTTGCCACAAGGATTCTCCA+AGG | 0.641069 | 8.3:-36632006 | MS.gene71221:CDS |
AAGAAGGGAACAAGAGAATG+GGG | 0.641846 | 8.3:+36631832 | None:intergenic |
AATCTCCAACTTGGCCTAGG+CGG | 0.642233 | 8.3:+36631356 | None:intergenic |
GATTGGAAGTGAGTAAAGGA+TGG | 0.644416 | 8.3:+36631854 | None:intergenic |
AGTCCATGCTTTGAGCCAAG+TGG | 0.645676 | 8.3:+36631921 | None:intergenic |
TCCTACTTCCATCAATACCA+AGG | 0.653031 | 8.3:-36632036 | MS.gene71221:CDS |
TCCTTGGTATTGATGGAAGT+AGG | 0.653788 | 8.3:+36632035 | None:intergenic |
TCCAAAGAAGAAGAATCCAA+AGG | 0.663515 | 8.3:-36631400 | MS.gene71221:CDS |
AACACCTTGGAGAATCCTTG+TGG | 0.666075 | 8.3:+36632002 | None:intergenic |
ATTGGAAGGAAAGCTTGGAA+AGG | 0.672349 | 8.3:-36631516 | MS.gene71221:CDS |
AAAGTAAATTGGCTACACAT+GGG | 0.678157 | 8.3:-36631282 | MS.gene71221:CDS |
GAAAGAGTCAACTTGCAAGG+TGG | 0.777827 | 8.3:-36631701 | MS.gene71221:CDS |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATCTCTTTCAAATAAAAACT+AGG | + | chr8.3:36631975-36631994 | None:intergenic | 20.0% |
!! | CAATATCTTTGTCATAATAA+AGG | + | chr8.3:36631623-36631642 | None:intergenic | 20.0% |
! | GAATTTGGCAATAATTCATA+TGG | + | chr8.3:36631696-36631715 | None:intergenic | 25.0% |
AAAGTAAATTGGCTACACAT+GGG | - | chr8.3:36632138-36632157 | MS.gene71221:CDS | 30.0% | |
AGTGGTAACTAAGAGAATAT+CGG | + | chr8.3:36631466-36631485 | None:intergenic | 30.0% | |
CACTATCACTGAAAGTAAAT+TGG | - | chr8.3:36632127-36632146 | MS.gene71221:CDS | 30.0% | |
TACTTGCAAGAATACGATTT+AGG | - | chr8.3:36631306-36631325 | MS.gene71221:CDS | 30.0% | |
TTTGACAAGATAAAACACCT+TGG | + | chr8.3:36631434-36631453 | None:intergenic | 30.0% | |
! | AAAGAGATTGCTGAGTTTTT+GGG | - | chr8.3:36631987-36632006 | MS.gene71221:CDS | 30.0% |
! | GTAATCCATCCTTTTTCTAA+TGG | + | chr8.3:36631363-36631382 | None:intergenic | 30.0% |
! | TCGTATTCTTGCAAGTATTT+TGG | + | chr8.3:36631303-36631322 | None:intergenic | 30.0% |
!! | GTATTTGTTTTCCATACCTT+TGG | + | chr8.3:36632039-36632058 | None:intergenic | 30.0% |
ACCTTTGGATTCTTCTTCTT+TGG | + | chr8.3:36632024-36632043 | None:intergenic | 35.0% | |
AGAAGAAGAATCCAAAGGTA+TGG | - | chr8.3:36632025-36632044 | MS.gene71221:CDS | 35.0% | |
ATAAAGGTCATACTCCAAGA+AGG | + | chr8.3:36631607-36631626 | None:intergenic | 35.0% | |
ATATGTGTAGAGAAGAGTCT+TGG | + | chr8.3:36631672-36631691 | None:intergenic | 35.0% | |
CATTGCCATTAGAAAAAGGA+TGG | - | chr8.3:36631355-36631374 | MS.gene71221:CDS | 35.0% | |
GAAAGTAAATTGGCTACACA+TGG | - | chr8.3:36632137-36632156 | MS.gene71221:CDS | 35.0% | |
GTATCAATTCCTTGCATTCT+TGG | + | chr8.3:36631332-36631351 | None:intergenic | 35.0% | |
TAAAGGTCATACTCCAAGAA+GGG | + | chr8.3:36631606-36631625 | None:intergenic | 35.0% | |
TCCAAAGAAGAAGAATCCAA+AGG | - | chr8.3:36632020-36632039 | MS.gene71221:CDS | 35.0% | |
TGCAAAAATGTTCTCACAAC+TGG | - | chr8.3:36632086-36632105 | MS.gene71221:CDS | 35.0% | |
TTCAAAAACATCACCTTCTC+TGG | + | chr8.3:36631930-36631949 | None:intergenic | 35.0% | |
! | CATTTTTGCAATCTCCAACT+TGG | + | chr8.3:36632076-36632095 | None:intergenic | 35.0% |
! | CCTTTTTCTAATGGCAATGT+GGG | + | chr8.3:36631354-36631373 | None:intergenic | 35.0% |
! | GAAAGAGATTGCTGAGTTTT+TGG | - | chr8.3:36631986-36632005 | MS.gene71221:CDS | 35.0% |
! | GAATGCTTGGATATTTGTTG+CGG | + | chr8.3:36631539-36631558 | None:intergenic | 35.0% |
! | GAGTTCTTTTGGACTGTTTT+GGG | - | chr8.3:36631866-36631885 | MS.gene71221:CDS | 35.0% |
! | GTTGACTCTTTCACAGAATT+TGG | + | chr8.3:36631711-36631730 | None:intergenic | 35.0% |
! | TCCATCAATACCAAGGATTT+TGG | - | chr8.3:36631391-36631410 | MS.gene71221:CDS | 35.0% |
! | TCCTTTTTCTAATGGCAATG+TGG | + | chr8.3:36631355-36631374 | None:intergenic | 35.0% |
!! | AAGACACTTTTGTTTCGCAT+TGG | - | chr8.3:36631763-36631782 | MS.gene71221:CDS | 35.0% |
!! | GCTTTTGAGAGTTTTTGTAG+AGG | - | chr8.3:36631840-36631859 | MS.gene71221:CDS | 35.0% |
!!! | AACAAATACTTTTTCCGCCT+AGG | - | chr8.3:36632050-36632069 | MS.gene71221:CDS | 35.0% |
!!! | TGCGAAACAAAAGTGTCTTT+TGG | + | chr8.3:36631762-36631781 | None:intergenic | 35.0% |
AAAGCCTCTTCTAATGGAAG+TGG | + | chr8.3:36631825-36631844 | None:intergenic | 40.0% | |
AAGAAGGGAACAAGAGAATG+GGG | + | chr8.3:36631591-36631610 | None:intergenic | 40.0% | |
ATTGGAAGGAAAGCTTGGAA+AGG | - | chr8.3:36631904-36631923 | MS.gene71221:CDS | 40.0% | |
CAAGAAGGGAACAAGAGAAT+GGG | + | chr8.3:36631592-36631611 | None:intergenic | 40.0% | |
CCCACATTGCCATTAGAAAA+AGG | - | chr8.3:36631351-36631370 | MS.gene71221:CDS | 40.0% | |
CTCTCAAAAGCCTCTTCTAA+TGG | + | chr8.3:36631831-36631850 | None:intergenic | 40.0% | |
GATTGGAAGTGAGTAAAGGA+TGG | + | chr8.3:36631569-36631588 | None:intergenic | 40.0% | |
GCATGTATTGGGATATTGGA+AGG | - | chr8.3:36631890-36631909 | MS.gene71221:CDS | 40.0% | |
GGATGGTTGTTATGAATGCT+TGG | + | chr8.3:36631552-36631571 | None:intergenic | 40.0% | |
TCCTACTTCCATCAATACCA+AGG | - | chr8.3:36631384-36631403 | MS.gene71221:CDS | 40.0% | |
TGTGAAAGAGTCAACTTGCA+AGG | - | chr8.3:36631716-36631735 | MS.gene71221:CDS | 40.0% | |
TTAGTTACCACTCCAAAAGC+AGG | - | chr8.3:36631474-36631493 | MS.gene71221:CDS | 40.0% | |
! | AAGCTAAGAGCACAAAGTAG+AGG | - | chr8.3:36631798-36631817 | MS.gene71221:CDS | 40.0% |
! | CGAGTTCTTTTGGACTGTTT+TGG | - | chr8.3:36631865-36631884 | MS.gene71221:CDS | 40.0% |
! | GCCAAAATCCTTGGTATTGA+TGG | + | chr8.3:36631395-36631414 | None:intergenic | 40.0% |
!! | TCCTTGGTATTGATGGAAGT+AGG | + | chr8.3:36631388-36631407 | None:intergenic | 40.0% |
!!! | ACTGTTTTGGGAGCATGTAT+TGG | - | chr8.3:36631878-36631897 | MS.gene71221:CDS | 40.0% |
!!! | ATTGCTGAGTTTTTGGGTTG+TGG | - | chr8.3:36631993-36632012 | MS.gene71221:CDS | 40.0% |
!!! | CTGTTTTGGGAGCATGTATT+GGG | - | chr8.3:36631879-36631898 | MS.gene71221:CDS | 40.0% |
AACACCTTGGAGAATCCTTG+TGG | + | chr8.3:36631421-36631440 | None:intergenic | 45.0% | |
AGGACCACTTCCATTAGAAG+AGG | - | chr8.3:36631818-36631837 | MS.gene71221:CDS | 45.0% | |
AGGTGACAATGAGTCGAGAT+CGG | + | chr8.3:36631649-36631668 | None:intergenic | 45.0% | |
CCAAGAAGGGAACAAGAGAA+TGG | + | chr8.3:36631593-36631612 | None:intergenic | 45.0% | |
CCATTCTCTTGTTCCCTTCT+TGG | - | chr8.3:36631590-36631609 | MS.gene71221:CDS | 45.0% | |
CGATTTAGGCCAAGAATGCA+AGG | - | chr8.3:36631320-36631339 | MS.gene71221:CDS | 45.0% | |
GAAAGAGTCAACTTGCAAGG+TGG | - | chr8.3:36631719-36631738 | MS.gene71221:CDS | 45.0% | |
GGGATATTGGAAGGAAAGCT+TGG | - | chr8.3:36631899-36631918 | MS.gene71221:CDS | 45.0% | |
TGGGGATTGGAAGTGAGTAA+AGG | + | chr8.3:36631573-36631592 | None:intergenic | 45.0% | |
TGTGTAGAGAAGAGTCTTGG+AGG | + | chr8.3:36631669-36631688 | None:intergenic | 45.0% | |
TTGTGGCAAGCCAAAATCCT+TGG | + | chr8.3:36631404-36631423 | None:intergenic | 45.0% | |
! | GGGAGCATGTATTGGGATAT+TGG | - | chr8.3:36631886-36631905 | MS.gene71221:CDS | 45.0% |
!! | TGTAGAGGTGCGAGTTCTTT+TGG | - | chr8.3:36631855-36631874 | MS.gene71221:CDS | 45.0% |
!!! | AAGGATTTTGGCTTGCCACA+AGG | - | chr8.3:36631403-36631422 | MS.gene71221:CDS | 45.0% |
AAGCTTGGAAAGGCCAGAGA+AGG | - | chr8.3:36631914-36631933 | MS.gene71221:CDS | 50.0% | |
AATCTCCAACTTGGCCTAGG+CGG | + | chr8.3:36632067-36632086 | None:intergenic | 50.0% | |
CTCCAAAAGCAGGTACCACT+TGG | - | chr8.3:36631484-36631503 | MS.gene71221:CDS | 50.0% | |
CTTGCCACAAGGATTCTCCA+AGG | - | chr8.3:36631414-36631433 | MS.gene71221:CDS | 50.0% | |
GGGAACAAGAGAATGGGGAT+TGG | + | chr8.3:36631586-36631605 | None:intergenic | 50.0% | |
GGTGACAATGAGTCGAGATC+GGG | + | chr8.3:36631648-36631667 | None:intergenic | 50.0% | |
GTACCACTTGGCTCAAAGCA+TGG | - | chr8.3:36631496-36631515 | MS.gene71221:CDS | 50.0% | |
TGCAATCTCCAACTTGGCCT+AGG | + | chr8.3:36632070-36632089 | None:intergenic | 50.0% | |
! | AGCCAAGTGGTACCTGCTTT+TGG | + | chr8.3:36631489-36631508 | None:intergenic | 50.0% |
! | AGTCCATGCTTTGAGCCAAG+TGG | + | chr8.3:36631502-36631521 | None:intergenic | 50.0% |
! | TTTTTCCGCCTAGGCCAAGT+TGG | - | chr8.3:36632059-36632078 | MS.gene71221:CDS | 50.0% |
!! | AGTGGTACCTGCTTTTGGAG+TGG | + | chr8.3:36631484-36631503 | None:intergenic | 50.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 36631264 | 36632178 | 36631264 | ID=MS.gene71221 |
chr8.3 | mRNA | 36631264 | 36632178 | 36631264 | ID=MS.gene71221.t1;Parent=MS.gene71221 |
chr8.3 | exon | 36631264 | 36632178 | 36631264 | ID=MS.gene71221.t1.exon1;Parent=MS.gene71221.t1 |
chr8.3 | CDS | 36631264 | 36632178 | 36631264 | ID=cds.MS.gene71221.t1;Parent=MS.gene71221.t1 |
Gene Sequence |
Protein sequence |