Alfalfa Gene Editing Database
Nr:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71222.t1 | XP_003628742.1 | 99.2 | 240 | 2 | 0 | 1 | 240 | 1 | 240 | 1.50E-128 | 468.8 |
Swissprot:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71222.t1 | Q6E6S7 | 78.3 | 240 | 51 | 1 | 1 | 240 | 1 | 239 | 2.4e-98 | 359.8 |
Trembl:
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71222.t1 | G7LGW9 | 99.2 | 240 | 2 | 0 | 1 | 240 | 1 | 240 | 1.1e-128 | 468.8 |
TFs/TRs:
Gene ID | Type | Classification |
---|---|---|
MS.gene71222.t1 | TF | MADS-MIKC |
Protein Kinases:
Gene ID | Type | Classification |
---|
Network:
Co-expression Network:
Gene1 | Gene2 | correlation coefficient | p_value | FDR |
---|
PPI:
Gene1 | Gene2 | Type |
---|---|---|
MS.gene040784 | MS.gene71222 | PPI |
MS.gene71222 | MS.gene035541 | PPI |
MS.gene71222 | MS.gene93274 | PPI |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71222.t1 | MTR_8g066260 | 99.167 | 240 | 2 | 0 | 1 | 240 | 1 | 240 | 2.39e-180 | 494 |
MS.gene71222.t1 | MTR_5g046790 | 76.415 | 212 | 47 | 3 | 1 | 210 | 1 | 211 | 3.28e-113 | 323 |
MS.gene71222.t1 | MTR_4g109830 | 74.556 | 169 | 43 | 0 | 1 | 169 | 1 | 169 | 4.38e-89 | 263 |
MS.gene71222.t1 | MTR_7g016630 | 63.492 | 189 | 60 | 3 | 1 | 189 | 1 | 180 | 1.87e-77 | 234 |
MS.gene71222.t1 | MTR_8g097090 | 48.869 | 221 | 99 | 4 | 1 | 210 | 1 | 218 | 5.16e-60 | 189 |
MS.gene71222.t1 | MTR_4g109810 | 52.222 | 180 | 80 | 3 | 1 | 178 | 1 | 176 | 2.54e-59 | 187 |
MS.gene71222.t1 | MTR_6g015975 | 45.374 | 227 | 114 | 3 | 1 | 218 | 1 | 226 | 1.19e-58 | 186 |
MS.gene71222.t1 | MTR_3g084980 | 54.598 | 174 | 78 | 1 | 1 | 173 | 1 | 174 | 4.95e-58 | 184 |
MS.gene71222.t1 | MTR_7g016600 | 46.903 | 226 | 103 | 5 | 1 | 214 | 1 | 221 | 1.52e-57 | 183 |
MS.gene71222.t1 | MTR_7g075850 | 45.064 | 233 | 112 | 4 | 1 | 232 | 1 | 218 | 4.95e-57 | 182 |
MS.gene71222.t1 | MTR_8g033270 | 46.818 | 220 | 108 | 5 | 1 | 216 | 1 | 215 | 3.94e-54 | 174 |
MS.gene71222.t1 | MTR_2g461760 | 56.790 | 162 | 66 | 2 | 63 | 224 | 1 | 158 | 3.70e-52 | 167 |
MS.gene71222.t1 | MTR_2g461760 | 56.790 | 162 | 65 | 2 | 63 | 224 | 1 | 157 | 1.02e-51 | 166 |
MS.gene71222.t1 | MTR_7g075870 | 50.000 | 170 | 84 | 1 | 1 | 170 | 1 | 169 | 9.01e-50 | 162 |
MS.gene71222.t1 | MTR_7g075870 | 48.824 | 170 | 87 | 0 | 1 | 170 | 1 | 170 | 3.44e-49 | 160 |
MS.gene71222.t1 | MTR_3g452380 | 44.976 | 209 | 100 | 4 | 1 | 206 | 16 | 212 | 3.22e-48 | 159 |
MS.gene71222.t1 | MTR_2g017865 | 47.222 | 180 | 88 | 2 | 1 | 177 | 16 | 191 | 1.46e-47 | 158 |
MS.gene71222.t1 | MTR_6g464720 | 51.724 | 174 | 81 | 2 | 1 | 172 | 1 | 173 | 3.83e-47 | 157 |
MS.gene71222.t1 | MTR_8g033220 | 48.837 | 172 | 86 | 2 | 1 | 171 | 1 | 171 | 2.27e-46 | 154 |
MS.gene71222.t1 | MTR_8g033220 | 48.837 | 172 | 86 | 2 | 1 | 171 | 1 | 171 | 2.32e-46 | 154 |
MS.gene71222.t1 | MTR_2g009890 | 45.349 | 172 | 92 | 2 | 1 | 172 | 1 | 170 | 1.30e-45 | 154 |
MS.gene71222.t1 | MTR_8g087860 | 44.444 | 180 | 93 | 2 | 1 | 177 | 17 | 192 | 9.82e-44 | 147 |
MS.gene71222.t1 | MTR_4g102530 | 48.295 | 176 | 78 | 3 | 1 | 170 | 1 | 169 | 4.72e-43 | 145 |
MS.gene71222.t1 | MTR_5g031000 | 40.000 | 210 | 117 | 4 | 1 | 204 | 1 | 207 | 1.83e-42 | 144 |
MS.gene71222.t1 | MTR_1g101970 | 46.821 | 173 | 88 | 3 | 1 | 171 | 1 | 171 | 1.80e-41 | 140 |
MS.gene71222.t1 | MTR_5g031000 | 43.023 | 172 | 95 | 2 | 1 | 172 | 1 | 169 | 3.39e-41 | 141 |
MS.gene71222.t1 | MTR_3g005530 | 40.449 | 178 | 105 | 1 | 1 | 178 | 1 | 177 | 6.86e-41 | 140 |
MS.gene71222.t1 | MTR_4g036050 | 40.107 | 187 | 97 | 2 | 1 | 179 | 1 | 180 | 7.88e-40 | 136 |
MS.gene71222.t1 | MTR_1g038300 | 40.805 | 174 | 97 | 3 | 1 | 169 | 1 | 173 | 1.93e-39 | 136 |
MS.gene71222.t1 | MTR_4g036050 | 43.030 | 165 | 79 | 2 | 1 | 157 | 1 | 158 | 3.50e-38 | 132 |
MS.gene71222.t1 | MTR_4g036050 | 44.371 | 151 | 69 | 2 | 1 | 143 | 1 | 144 | 3.40e-36 | 126 |
MS.gene71222.t1 | MTR_4g036050 | 44.371 | 151 | 69 | 2 | 1 | 143 | 1 | 144 | 5.32e-36 | 126 |
MS.gene71222.t1 | MTR_5g032520 | 45.665 | 173 | 91 | 3 | 1 | 172 | 1 | 171 | 5.55e-36 | 127 |
MS.gene71222.t1 | MTR_2g461710 | 88.710 | 62 | 7 | 0 | 1 | 62 | 1 | 62 | 9.84e-35 | 119 |
MS.gene71222.t1 | MTR_3g088615 | 46.528 | 144 | 71 | 3 | 1 | 143 | 1 | 139 | 1.26e-33 | 120 |
MS.gene71222.t1 | MTR_5g046870 | 68.421 | 76 | 24 | 0 | 1 | 76 | 1 | 76 | 3.70e-33 | 116 |
MS.gene71222.t1 | MTR_5g032150 | 43.787 | 169 | 92 | 3 | 1 | 168 | 1 | 167 | 4.11e-33 | 120 |
MS.gene71222.t1 | MTR_0003s0590 | 37.705 | 244 | 133 | 8 | 1 | 238 | 1 | 231 | 7.19e-33 | 120 |
MS.gene71222.t1 | MTR_1g053070 | 35.656 | 244 | 129 | 7 | 1 | 233 | 1 | 227 | 1.05e-32 | 119 |
MS.gene71222.t1 | MTR_4g093970 | 38.587 | 184 | 110 | 2 | 1 | 182 | 27 | 209 | 9.12e-32 | 117 |
MS.gene71222.t1 | MTR_5g021270 | 36.979 | 192 | 99 | 6 | 1 | 181 | 1 | 181 | 1.95e-29 | 110 |
MS.gene71222.t1 | MTR_3g113030 | 38.547 | 179 | 92 | 5 | 1 | 172 | 1 | 168 | 1.17e-28 | 108 |
MS.gene71222.t1 | MTR_1g029670 | 38.554 | 166 | 92 | 4 | 1 | 165 | 1 | 157 | 1.19e-28 | 107 |
MS.gene71222.t1 | MTR_5g021270 | 36.872 | 179 | 91 | 6 | 1 | 168 | 1 | 168 | 9.24e-28 | 106 |
MS.gene71222.t1 | MTR_5g066180 | 38.150 | 173 | 102 | 4 | 1 | 172 | 1 | 169 | 9.54e-27 | 103 |
MS.gene71222.t1 | MTR_3g102570 | 55.128 | 78 | 35 | 0 | 1 | 78 | 1 | 78 | 1.20e-21 | 91.7 |
MS.gene71222.t1 | MTR_4g084740 | 33.679 | 193 | 104 | 4 | 1 | 178 | 1 | 184 | 3.17e-21 | 90.9 |
MS.gene71222.t1 | MTR_4g093030 | 54.167 | 72 | 33 | 0 | 1 | 72 | 1 | 72 | 1.35e-20 | 85.5 |
MS.gene71222.t1 | MTR_5g066960 | 59.322 | 59 | 24 | 0 | 1 | 59 | 1 | 59 | 2.18e-20 | 82.0 |
MS.gene71222.t1 | MTR_2g030740 | 38.318 | 107 | 62 | 2 | 2 | 104 | 9 | 115 | 1.11e-17 | 79.7 |
MS.gene71222.t1 | MTR_3g052920 | 44.578 | 83 | 43 | 1 | 2 | 81 | 9 | 91 | 2.79e-17 | 78.6 |
MS.gene71222.t1 | MTR_1g108510 | 47.887 | 71 | 34 | 2 | 2 | 70 | 7 | 76 | 1.40e-16 | 76.3 |
MS.gene71222.t1 | MTR_3g030770 | 47.887 | 71 | 34 | 2 | 2 | 70 | 7 | 76 | 1.62e-16 | 76.3 |
MS.gene71222.t1 | MTR_3g052870 | 35.514 | 107 | 65 | 2 | 2 | 104 | 9 | 115 | 8.83e-16 | 73.9 |
MS.gene71222.t1 | MTR_1g105910 | 40.964 | 83 | 46 | 1 | 2 | 81 | 9 | 91 | 9.35e-16 | 74.3 |
MS.gene71222.t1 | MTR_1g041615 | 70.455 | 44 | 13 | 0 | 16 | 59 | 20 | 63 | 1.03e-15 | 72.0 |
MS.gene71222.t1 | MTR_2g093190 | 44.928 | 69 | 37 | 1 | 2 | 70 | 9 | 76 | 1.21e-15 | 73.9 |
MS.gene71222.t1 | MTR_8g051580 | 45.070 | 71 | 36 | 1 | 1 | 68 | 1 | 71 | 1.29e-15 | 72.8 |
MS.gene71222.t1 | MTR_1g105920 | 40.964 | 83 | 46 | 1 | 2 | 81 | 9 | 91 | 1.37e-15 | 73.9 |
MS.gene71222.t1 | MTR_1g077360 | 49.275 | 69 | 34 | 1 | 2 | 70 | 9 | 76 | 1.55e-15 | 73.6 |
MS.gene71222.t1 | MTR_8g043650 | 46.377 | 69 | 36 | 1 | 2 | 70 | 9 | 76 | 1.70e-15 | 73.6 |
MS.gene71222.t1 | MTR_5g046830 | 39.362 | 94 | 54 | 1 | 94 | 187 | 22 | 112 | 1.80e-15 | 72.0 |
MS.gene71222.t1 | MTR_5g045560 | 47.143 | 70 | 36 | 1 | 1 | 70 | 8 | 76 | 2.47e-15 | 73.2 |
MS.gene71222.t1 | MTR_1g012570 | 36.792 | 106 | 63 | 2 | 2 | 103 | 9 | 114 | 4.09e-15 | 72.4 |
MS.gene71222.t1 | MTR_1g108580 | 46.479 | 71 | 35 | 2 | 2 | 70 | 7 | 76 | 5.92e-15 | 72.0 |
MS.gene71222.t1 | MTR_0121s0100 | 54.237 | 59 | 25 | 1 | 2 | 58 | 7 | 65 | 6.43e-15 | 69.7 |
MS.gene71222.t1 | MTR_2g085280 | 46.377 | 69 | 36 | 1 | 2 | 70 | 9 | 76 | 6.49e-15 | 72.0 |
MS.gene71222.t1 | MTR_2g085250 | 46.377 | 69 | 36 | 1 | 2 | 70 | 9 | 76 | 6.90e-15 | 72.0 |
MS.gene71222.t1 | MTR_5g066990 | 30.935 | 139 | 91 | 2 | 59 | 197 | 2 | 135 | 1.17e-14 | 70.1 |
MS.gene71222.t1 | MTR_1g047550 | 40.860 | 93 | 41 | 2 | 1 | 90 | 1 | 82 | 1.62e-14 | 69.7 |
MS.gene71222.t1 | MTR_5g066990 | 34.211 | 114 | 74 | 1 | 59 | 172 | 2 | 114 | 1.97e-14 | 69.3 |
MS.gene71222.t1 | MTR_1g075600 | 46.377 | 69 | 36 | 1 | 2 | 70 | 9 | 76 | 1.98e-14 | 70.5 |
MS.gene71222.t1 | MTR_4g108720 | 43.038 | 79 | 44 | 1 | 1 | 78 | 1 | 79 | 2.01e-14 | 72.0 |
MS.gene71222.t1 | MTR_8g079502 | 48.276 | 58 | 30 | 0 | 1 | 58 | 1 | 58 | 2.51e-14 | 69.3 |
MS.gene71222.t1 | MTR_5g055100 | 44.928 | 69 | 37 | 1 | 2 | 70 | 9 | 76 | 2.52e-14 | 70.5 |
MS.gene71222.t1 | MTR_8g086290 | 46.377 | 69 | 36 | 1 | 2 | 70 | 12 | 79 | 3.68e-14 | 68.6 |
MS.gene71222.t1 | MTR_1g054265 | 35.165 | 91 | 58 | 1 | 1 | 91 | 1 | 90 | 3.75e-14 | 68.6 |
MS.gene71222.t1 | MTR_4g094632 | 44.262 | 61 | 34 | 0 | 1 | 61 | 1 | 61 | 3.75e-14 | 68.2 |
MS.gene71222.t1 | MTR_1g106070 | 38.554 | 83 | 48 | 1 | 2 | 81 | 9 | 91 | 5.49e-14 | 68.6 |
MS.gene71222.t1 | MTR_1g063160 | 46.552 | 58 | 31 | 0 | 1 | 58 | 1 | 58 | 8.57e-14 | 67.8 |
MS.gene71222.t1 | MTR_2g105290 | 50.000 | 58 | 29 | 0 | 1 | 58 | 11 | 68 | 9.15e-14 | 67.8 |
MS.gene71222.t1 | MTR_3g080940 | 44.286 | 70 | 38 | 1 | 1 | 70 | 8 | 76 | 9.87e-14 | 68.2 |
MS.gene71222.t1 | MTR_5g053390 | 44.928 | 69 | 37 | 1 | 2 | 70 | 9 | 76 | 1.72e-13 | 68.2 |
MS.gene71222.t1 | MTR_3g030780 | 43.478 | 69 | 38 | 1 | 2 | 70 | 9 | 76 | 2.40e-13 | 65.5 |
MS.gene71222.t1 | MTR_7g028448 | 58.182 | 55 | 22 | 1 | 16 | 70 | 26 | 79 | 3.65e-13 | 65.9 |
MS.gene71222.t1 | MTR_4g036915 | 58.182 | 55 | 22 | 1 | 16 | 70 | 26 | 79 | 3.65e-13 | 65.9 |
MS.gene71222.t1 | MTR_4g094638 | 35.632 | 87 | 50 | 2 | 1 | 82 | 1 | 86 | 3.79e-13 | 65.9 |
MS.gene71222.t1 | MTR_0121s0080 | 43.662 | 71 | 37 | 2 | 2 | 70 | 7 | 76 | 6.45e-13 | 66.6 |
MS.gene71222.t1 | MTR_4g131030 | 44.828 | 58 | 32 | 0 | 1 | 58 | 1 | 58 | 6.74e-13 | 65.9 |
MS.gene71222.t1 | MTR_5g041650 | 37.975 | 79 | 48 | 1 | 1 | 78 | 38 | 116 | 3.42e-12 | 65.5 |
MS.gene71222.t1 | MTR_1g105905 | 46.667 | 60 | 31 | 1 | 11 | 70 | 1 | 59 | 9.35e-12 | 62.8 |
MS.gene71222.t1 | MTR_8g046350 | 37.500 | 72 | 42 | 1 | 1 | 69 | 1 | 72 | 1.20e-11 | 61.6 |
MS.gene71222.t1 | MTR_8g033250 | 38.182 | 110 | 64 | 2 | 66 | 171 | 4 | 113 | 1.98e-11 | 60.8 |
MS.gene71222.t1 | MTR_3g031100 | 26.724 | 232 | 132 | 7 | 1 | 205 | 1 | 221 | 2.66e-11 | 62.0 |
Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
---|---|---|---|---|---|---|---|---|---|---|---|
MS.gene71222.t1 | AT1G69120 | 71.260 | 254 | 59 | 3 | 1 | 240 | 1 | 254 | 1.21e-121 | 346 |
MS.gene71222.t1 | AT1G26310 | 66.142 | 254 | 71 | 6 | 1 | 240 | 1 | 253 | 2.75e-109 | 315 |
MS.gene71222.t1 | AT1G69120 | 84.270 | 178 | 28 | 0 | 1 | 178 | 1 | 178 | 3.45e-106 | 306 |
MS.gene71222.t1 | AT5G60910 | 70.811 | 185 | 54 | 0 | 1 | 185 | 1 | 185 | 1.53e-93 | 275 |
MS.gene71222.t1 | AT1G69120 | 63.021 | 192 | 57 | 3 | 63 | 240 | 1 | 192 | 2.72e-72 | 219 |
MS.gene71222.t1 | AT3G30260 | 60.221 | 181 | 72 | 0 | 1 | 181 | 1 | 181 | 1.60e-63 | 199 |
MS.gene71222.t1 | AT1G24260 | 49.744 | 195 | 96 | 1 | 1 | 193 | 1 | 195 | 3.55e-60 | 190 |
MS.gene71222.t1 | AT1G24260 | 50.000 | 200 | 89 | 2 | 1 | 193 | 1 | 196 | 7.48e-60 | 189 |
MS.gene71222.t1 | AT5G15800 | 52.874 | 174 | 82 | 0 | 1 | 174 | 1 | 174 | 7.11e-56 | 179 |
MS.gene71222.t1 | AT5G15800 | 52.874 | 174 | 82 | 0 | 1 | 174 | 1 | 174 | 9.70e-56 | 179 |
MS.gene71222.t1 | AT3G02310 | 45.982 | 224 | 103 | 3 | 1 | 210 | 1 | 220 | 1.23e-55 | 178 |
MS.gene71222.t1 | AT1G24260 | 56.098 | 164 | 61 | 2 | 1 | 157 | 1 | 160 | 1.61e-54 | 175 |
MS.gene71222.t1 | AT3G02310 | 53.216 | 171 | 80 | 0 | 1 | 171 | 1 | 171 | 1.64e-54 | 174 |
MS.gene71222.t1 | AT2G45650 | 48.259 | 201 | 95 | 5 | 1 | 197 | 1 | 196 | 4.90e-52 | 169 |
MS.gene71222.t1 | AT2G03710 | 44.920 | 187 | 99 | 3 | 1 | 186 | 1 | 184 | 6.15e-51 | 167 |
MS.gene71222.t1 | AT2G03710 | 44.920 | 187 | 99 | 3 | 1 | 186 | 1 | 184 | 7.05e-51 | 166 |
MS.gene71222.t1 | AT2G03710 | 46.243 | 173 | 91 | 2 | 1 | 172 | 1 | 172 | 5.65e-50 | 162 |
MS.gene71222.t1 | AT3G61120 | 51.176 | 170 | 76 | 3 | 1 | 168 | 1 | 165 | 3.01e-47 | 157 |
MS.gene71222.t1 | AT5G60910 | 58.537 | 123 | 51 | 0 | 63 | 185 | 1 | 123 | 3.31e-46 | 152 |
MS.gene71222.t1 | AT2G14210 | 44.279 | 201 | 106 | 3 | 1 | 196 | 1 | 200 | 1.38e-45 | 152 |
MS.gene71222.t1 | AT2G14210 | 44.279 | 201 | 106 | 3 | 1 | 196 | 1 | 200 | 1.51e-45 | 152 |
MS.gene71222.t1 | AT3G58780 | 44.086 | 186 | 97 | 2 | 1 | 183 | 16 | 197 | 2.62e-45 | 152 |
MS.gene71222.t1 | AT3G58780 | 44.086 | 186 | 97 | 2 | 1 | 183 | 22 | 203 | 3.05e-45 | 152 |
MS.gene71222.t1 | AT4G37940 | 43.353 | 173 | 96 | 2 | 1 | 173 | 1 | 171 | 2.04e-44 | 149 |
MS.gene71222.t1 | AT2G45660 | 42.268 | 194 | 105 | 2 | 1 | 194 | 1 | 187 | 2.57e-44 | 148 |
MS.gene71222.t1 | AT4G18960 | 43.478 | 184 | 87 | 3 | 2 | 177 | 18 | 192 | 5.12e-44 | 149 |
MS.gene71222.t1 | AT3G58780 | 42.473 | 186 | 93 | 2 | 1 | 183 | 16 | 190 | 4.37e-43 | 146 |
MS.gene71222.t1 | AT3G58780 | 40.097 | 207 | 100 | 2 | 1 | 183 | 16 | 222 | 1.15e-42 | 146 |
MS.gene71222.t1 | AT2G42830 | 41.711 | 187 | 102 | 2 | 1 | 184 | 16 | 198 | 1.53e-42 | 145 |
MS.gene71222.t1 | AT2G42830 | 42.473 | 186 | 100 | 2 | 1 | 183 | 16 | 197 | 1.55e-42 | 145 |
MS.gene71222.t1 | AT2G45660 | 47.170 | 159 | 83 | 1 | 1 | 159 | 1 | 158 | 8.51e-42 | 140 |
MS.gene71222.t1 | AT4G09960 | 42.373 | 177 | 101 | 1 | 1 | 177 | 1 | 176 | 2.61e-41 | 141 |
MS.gene71222.t1 | AT4G09960 | 42.373 | 177 | 101 | 1 | 1 | 177 | 2 | 177 | 2.86e-41 | 141 |
MS.gene71222.t1 | AT4G09960 | 42.373 | 177 | 101 | 1 | 1 | 177 | 11 | 186 | 3.42e-41 | 141 |
MS.gene71222.t1 | AT4G37940 | 42.690 | 171 | 96 | 2 | 1 | 171 | 1 | 169 | 4.92e-41 | 140 |
MS.gene71222.t1 | AT4G09960 | 42.373 | 177 | 101 | 1 | 1 | 177 | 27 | 202 | 9.10e-41 | 140 |
MS.gene71222.t1 | AT5G51870 | 42.778 | 180 | 94 | 4 | 1 | 175 | 1 | 176 | 2.81e-40 | 138 |
MS.gene71222.t1 | AT5G51870 | 42.778 | 180 | 94 | 4 | 1 | 175 | 11 | 186 | 3.61e-40 | 138 |
MS.gene71222.t1 | AT5G51870 | 43.931 | 173 | 88 | 4 | 1 | 168 | 1 | 169 | 4.32e-40 | 137 |
MS.gene71222.t1 | AT3G57230 | 42.529 | 174 | 94 | 4 | 1 | 172 | 1 | 170 | 6.83e-40 | 138 |
MS.gene71222.t1 | AT3G57230 | 42.529 | 174 | 94 | 4 | 1 | 172 | 1 | 170 | 6.83e-40 | 138 |
MS.gene71222.t1 | AT2G22630 | 40.462 | 173 | 101 | 2 | 1 | 173 | 1 | 171 | 1.68e-39 | 136 |
MS.gene71222.t1 | AT2G22630 | 40.462 | 173 | 101 | 2 | 1 | 173 | 1 | 171 | 1.68e-39 | 136 |
MS.gene71222.t1 | AT4G37940 | 45.833 | 144 | 76 | 2 | 1 | 144 | 1 | 142 | 7.89e-39 | 133 |
MS.gene71222.t1 | AT5G13790 | 44.828 | 174 | 91 | 2 | 1 | 174 | 1 | 169 | 1.77e-38 | 135 |
MS.gene71222.t1 | AT3G58780 | 37.443 | 219 | 97 | 3 | 1 | 183 | 16 | 230 | 1.92e-38 | 135 |
MS.gene71222.t1 | AT5G51870 | 47.020 | 151 | 72 | 3 | 1 | 147 | 1 | 147 | 2.70e-38 | 131 |
MS.gene71222.t1 | AT5G62165 | 43.023 | 172 | 95 | 3 | 1 | 171 | 1 | 170 | 4.08e-38 | 132 |
MS.gene71222.t1 | AT5G62165 | 43.023 | 172 | 95 | 3 | 1 | 171 | 1 | 170 | 4.08e-38 | 132 |
MS.gene71222.t1 | AT5G62165 | 43.023 | 172 | 95 | 3 | 1 | 171 | 1 | 170 | 4.08e-38 | 132 |
MS.gene71222.t1 | AT5G13790 | 44.253 | 174 | 89 | 2 | 1 | 174 | 1 | 166 | 5.91e-38 | 134 |
MS.gene71222.t1 | AT5G51870 | 47.020 | 151 | 72 | 3 | 1 | 147 | 24 | 170 | 7.81e-38 | 131 |
MS.gene71222.t1 | AT4G11880 | 49.689 | 161 | 76 | 3 | 1 | 160 | 1 | 157 | 8.24e-38 | 130 |
MS.gene71222.t1 | AT4G11880 | 49.689 | 161 | 76 | 3 | 1 | 160 | 1 | 157 | 8.24e-38 | 130 |
MS.gene71222.t1 | AT4G09960 | 41.436 | 181 | 101 | 2 | 1 | 177 | 96 | 275 | 2.42e-37 | 134 |
MS.gene71222.t1 | AT4G22950 | 43.429 | 175 | 91 | 3 | 1 | 172 | 1 | 170 | 4.49e-37 | 128 |
MS.gene71222.t1 | AT4G11880 | 47.674 | 172 | 87 | 2 | 1 | 171 | 1 | 170 | 5.95e-37 | 129 |
MS.gene71222.t1 | AT4G11880 | 47.674 | 172 | 87 | 2 | 1 | 171 | 1 | 170 | 5.95e-37 | 129 |
MS.gene71222.t1 | AT4G09960 | 45.455 | 143 | 77 | 1 | 1 | 143 | 1 | 142 | 7.11e-37 | 129 |
MS.gene71222.t1 | AT4G22950 | 44.767 | 172 | 91 | 3 | 1 | 171 | 1 | 169 | 2.25e-36 | 128 |
MS.gene71222.t1 | AT4G22950 | 44.767 | 172 | 91 | 3 | 1 | 171 | 1 | 169 | 2.25e-36 | 128 |
MS.gene71222.t1 | AT5G62165 | 43.038 | 158 | 87 | 3 | 1 | 157 | 1 | 156 | 4.59e-36 | 125 |
MS.gene71222.t1 | AT5G62165 | 43.038 | 158 | 87 | 3 | 1 | 157 | 1 | 156 | 4.59e-36 | 125 |
MS.gene71222.t1 | AT5G62165 | 43.038 | 158 | 87 | 3 | 1 | 157 | 1 | 156 | 4.59e-36 | 125 |
MS.gene71222.t1 | AT3G57230 | 45.517 | 145 | 73 | 4 | 1 | 143 | 1 | 141 | 1.72e-35 | 123 |
MS.gene71222.t1 | AT3G57390 | 41.209 | 182 | 93 | 5 | 1 | 172 | 1 | 178 | 6.31e-35 | 124 |
MS.gene71222.t1 | AT3G57390 | 41.209 | 182 | 93 | 5 | 1 | 172 | 1 | 178 | 9.22e-35 | 125 |
MS.gene71222.t1 | AT5G65050 | 37.321 | 209 | 115 | 5 | 1 | 207 | 1 | 195 | 1.16e-34 | 123 |
MS.gene71222.t1 | AT5G51860 | 36.872 | 179 | 105 | 2 | 1 | 175 | 1 | 175 | 2.43e-34 | 122 |
MS.gene71222.t1 | AT1G71692 | 40.107 | 187 | 93 | 2 | 1 | 174 | 1 | 181 | 7.64e-34 | 121 |
MS.gene71222.t1 | AT5G23260 | 37.838 | 185 | 111 | 3 | 1 | 184 | 1 | 182 | 8.26e-34 | 122 |
MS.gene71222.t1 | AT5G65050 | 40.698 | 172 | 94 | 3 | 1 | 172 | 1 | 164 | 8.51e-34 | 120 |
MS.gene71222.t1 | AT5G62165 | 42.282 | 149 | 83 | 3 | 1 | 148 | 1 | 147 | 9.01e-34 | 119 |
MS.gene71222.t1 | AT5G62165 | 42.282 | 149 | 83 | 3 | 1 | 148 | 1 | 147 | 9.01e-34 | 119 |
MS.gene71222.t1 | AT5G62165 | 42.282 | 149 | 83 | 3 | 1 | 148 | 1 | 147 | 9.01e-34 | 119 |
MS.gene71222.t1 | AT5G62165 | 42.282 | 149 | 83 | 3 | 1 | 148 | 1 | 147 | 9.01e-34 | 119 |
MS.gene71222.t1 | AT5G62165 | 42.282 | 149 | 83 | 3 | 1 | 148 | 1 | 147 | 9.01e-34 | 119 |
MS.gene71222.t1 | AT5G62165 | 43.038 | 158 | 86 | 4 | 1 | 156 | 1 | 156 | 1.01e-33 | 120 |
MS.gene71222.t1 | AT5G62165 | 43.038 | 158 | 86 | 4 | 1 | 156 | 1 | 156 | 1.01e-33 | 120 |
MS.gene71222.t1 | AT5G65050 | 37.321 | 209 | 104 | 5 | 1 | 207 | 1 | 184 | 1.20e-33 | 120 |
MS.gene71222.t1 | AT5G65060 | 35.751 | 193 | 116 | 3 | 1 | 193 | 1 | 185 | 1.44e-33 | 120 |
MS.gene71222.t1 | AT5G23260 | 37.838 | 185 | 111 | 3 | 1 | 184 | 17 | 198 | 1.54e-33 | 122 |
MS.gene71222.t1 | AT2G22540 | 43.195 | 169 | 93 | 3 | 1 | 168 | 1 | 167 | 1.85e-33 | 121 |
MS.gene71222.t1 | AT2G22540 | 43.195 | 169 | 93 | 3 | 1 | 168 | 1 | 167 | 1.85e-33 | 121 |
MS.gene71222.t1 | AT5G51860 | 37.143 | 175 | 102 | 2 | 1 | 171 | 1 | 171 | 2.50e-33 | 120 |
MS.gene71222.t1 | AT5G65060 | 38.372 | 172 | 98 | 3 | 1 | 172 | 1 | 164 | 6.00e-33 | 118 |
MS.gene71222.t1 | AT5G65060 | 35.897 | 195 | 102 | 3 | 1 | 193 | 1 | 174 | 1.31e-32 | 117 |
MS.gene71222.t1 | AT5G65070 | 37.561 | 205 | 115 | 5 | 1 | 200 | 1 | 197 | 1.52e-31 | 115 |
MS.gene71222.t1 | AT5G20240 | 35.185 | 216 | 120 | 6 | 1 | 207 | 1 | 205 | 1.64e-31 | 115 |
MS.gene71222.t1 | AT5G65070 | 35.526 | 228 | 119 | 6 | 1 | 200 | 1 | 228 | 2.68e-31 | 115 |
MS.gene71222.t1 | AT2G22540 | 42.012 | 169 | 90 | 3 | 1 | 168 | 1 | 162 | 7.58e-31 | 114 |
MS.gene71222.t1 | AT4G24540 | 36.559 | 186 | 115 | 2 | 1 | 184 | 1 | 185 | 1.01e-30 | 113 |
MS.gene71222.t1 | AT5G20240 | 44.681 | 141 | 72 | 3 | 1 | 140 | 1 | 136 | 1.59e-30 | 111 |
MS.gene71222.t1 | AT5G10140 | 37.799 | 209 | 116 | 6 | 1 | 208 | 1 | 196 | 2.58e-30 | 112 |
MS.gene71222.t1 | AT5G23260 | 37.297 | 185 | 107 | 4 | 1 | 184 | 17 | 193 | 6.52e-30 | 112 |
MS.gene71222.t1 | AT5G10140 | 40.506 | 158 | 84 | 4 | 1 | 157 | 1 | 149 | 1.42e-29 | 109 |
MS.gene71222.t1 | AT5G65050 | 41.667 | 156 | 83 | 3 | 1 | 156 | 1 | 148 | 1.65e-29 | 109 |
MS.gene71222.t1 | AT5G10140 | 41.040 | 173 | 92 | 4 | 1 | 172 | 1 | 164 | 2.95e-29 | 108 |
MS.gene71222.t1 | AT5G65080 | 38.994 | 159 | 85 | 3 | 1 | 157 | 8 | 156 | 4.88e-29 | 108 |
MS.gene71222.t1 | AT3G54340 | 37.288 | 177 | 90 | 5 | 1 | 168 | 1 | 165 | 5.46e-29 | 109 |
MS.gene71222.t1 | AT5G10140 | 40.462 | 173 | 93 | 4 | 1 | 172 | 1 | 164 | 1.18e-28 | 107 |
MS.gene71222.t1 | AT1G77080 | 39.106 | 179 | 101 | 3 | 1 | 179 | 1 | 171 | 3.99e-28 | 105 |
MS.gene71222.t1 | AT1G77080 | 36.538 | 208 | 120 | 5 | 1 | 208 | 1 | 196 | 2.04e-27 | 104 |
MS.gene71222.t1 | AT1G77080 | 39.535 | 172 | 96 | 3 | 1 | 172 | 1 | 164 | 2.90e-27 | 103 |
MS.gene71222.t1 | AT5G23260 | 39.073 | 151 | 88 | 3 | 1 | 150 | 1 | 148 | 3.29e-27 | 105 |
MS.gene71222.t1 | AT5G65070 | 36.612 | 183 | 93 | 4 | 1 | 160 | 1 | 183 | 3.74e-27 | 103 |
MS.gene71222.t1 | AT5G65070 | 32.911 | 237 | 114 | 7 | 1 | 200 | 1 | 229 | 3.89e-26 | 102 |
MS.gene71222.t1 | AT5G62165 | 58.108 | 74 | 30 | 1 | 1 | 74 | 1 | 73 | 7.90e-26 | 97.4 |
MS.gene71222.t1 | AT1G77080 | 33.333 | 228 | 127 | 5 | 1 | 208 | 1 | 223 | 2.10e-25 | 99.8 |
MS.gene71222.t1 | AT5G65080 | 36.364 | 209 | 118 | 6 | 1 | 207 | 8 | 203 | 2.20e-25 | 99.4 |
MS.gene71222.t1 | AT5G65070 | 40.559 | 143 | 77 | 3 | 1 | 143 | 1 | 135 | 1.70e-24 | 95.5 |
MS.gene71222.t1 | AT1G31140 | 30.222 | 225 | 137 | 5 | 1 | 218 | 1 | 212 | 1.02e-23 | 95.1 |
MS.gene71222.t1 | AT1G77080 | 33.333 | 210 | 120 | 5 | 1 | 208 | 1 | 192 | 4.64e-23 | 92.8 |
MS.gene71222.t1 | AT1G31140 | 29.515 | 227 | 138 | 5 | 1 | 218 | 1 | 214 | 5.33e-23 | 93.2 |
MS.gene71222.t1 | AT1G77980 | 34.197 | 193 | 113 | 7 | 1 | 183 | 1 | 189 | 6.46e-20 | 87.4 |
MS.gene71222.t1 | AT2G34440 | 38.889 | 108 | 56 | 2 | 1 | 105 | 1 | 101 | 7.84e-20 | 84.0 |
MS.gene71222.t1 | AT1G22130 | 48.101 | 79 | 41 | 0 | 1 | 79 | 1 | 79 | 4.20e-19 | 85.1 |
MS.gene71222.t1 | AT1G77950 | 42.857 | 98 | 53 | 1 | 1 | 95 | 1 | 98 | 8.06e-19 | 82.8 |
MS.gene71222.t1 | AT1G77950 | 42.857 | 98 | 53 | 1 | 1 | 95 | 1 | 98 | 8.06e-19 | 82.8 |
MS.gene71222.t1 | AT1G77950 | 42.857 | 98 | 53 | 1 | 1 | 95 | 1 | 98 | 8.06e-19 | 82.8 |
MS.gene71222.t1 | AT1G77950 | 42.857 | 98 | 53 | 1 | 1 | 95 | 1 | 98 | 8.06e-19 | 82.8 |
MS.gene71222.t1 | AT1G77080 | 35.849 | 159 | 90 | 2 | 1 | 159 | 1 | 147 | 2.16e-18 | 79.3 |
MS.gene71222.t1 | AT1G18750 | 40.506 | 79 | 46 | 1 | 1 | 78 | 1 | 79 | 5.43e-16 | 76.6 |
MS.gene71222.t1 | AT1G18750 | 40.506 | 79 | 46 | 1 | 1 | 78 | 1 | 79 | 5.71e-16 | 76.6 |
MS.gene71222.t1 | AT1G18750 | 40.506 | 79 | 46 | 1 | 1 | 78 | 1 | 79 | 7.08e-16 | 76.6 |
MS.gene71222.t1 | AT4G37435 | 47.143 | 70 | 37 | 0 | 1 | 70 | 1 | 70 | 3.05e-15 | 72.0 |
MS.gene71222.t1 | AT2G24840 | 48.571 | 70 | 35 | 1 | 1 | 70 | 62 | 130 | 4.44e-15 | 72.8 |
MS.gene71222.t1 | AT4G36590 | 52.308 | 65 | 31 | 0 | 2 | 66 | 7 | 71 | 7.45e-15 | 72.0 |
MS.gene71222.t1 | AT2G03060 | 41.772 | 79 | 45 | 1 | 1 | 78 | 1 | 79 | 8.56e-15 | 73.2 |
MS.gene71222.t1 | AT2G03060 | 41.772 | 79 | 45 | 1 | 1 | 78 | 1 | 79 | 8.56e-15 | 73.2 |
MS.gene71222.t1 | AT2G03060 | 41.772 | 79 | 45 | 1 | 1 | 78 | 1 | 79 | 8.56e-15 | 73.2 |
MS.gene71222.t1 | AT1G01530 | 51.724 | 58 | 28 | 0 | 1 | 58 | 6 | 63 | 9.94e-15 | 71.6 |
MS.gene71222.t1 | AT2G03060 | 41.772 | 79 | 45 | 1 | 1 | 78 | 1 | 79 | 1.07e-14 | 72.8 |
MS.gene71222.t1 | AT4G37940 | 35.135 | 111 | 71 | 1 | 63 | 173 | 1 | 110 | 1.61e-14 | 69.7 |
MS.gene71222.t1 | AT1G65360 | 51.724 | 58 | 28 | 0 | 1 | 58 | 6 | 63 | 1.94e-14 | 70.5 |
MS.gene71222.t1 | AT5G60440 | 44.928 | 69 | 35 | 1 | 2 | 67 | 7 | 75 | 8.25e-14 | 69.7 |
MS.gene71222.t1 | AT3G66656 | 40.845 | 71 | 41 | 1 | 1 | 71 | 1 | 70 | 3.11e-13 | 66.2 |
MS.gene71222.t1 | AT2G26320 | 45.000 | 80 | 43 | 1 | 1 | 79 | 17 | 96 | 1.07e-12 | 63.2 |
MS.gene71222.t1 | AT3G04100 | 38.158 | 76 | 46 | 1 | 2 | 77 | 14 | 88 | 1.27e-12 | 65.1 |
MS.gene71222.t1 | AT1G72350 | 43.478 | 69 | 38 | 1 | 2 | 69 | 43 | 111 | 1.68e-12 | 65.1 |
MS.gene71222.t1 | AT1G69540 | 37.179 | 78 | 49 | 0 | 1 | 78 | 1 | 78 | 4.12e-12 | 65.1 |
MS.gene71222.t1 | AT1G47760 | 37.179 | 78 | 48 | 1 | 1 | 78 | 1 | 77 | 4.64e-12 | 63.2 |
MS.gene71222.t1 | AT4G18960 | 29.545 | 132 | 77 | 2 | 54 | 177 | 55 | 178 | 5.59e-12 | 63.9 |
MS.gene71222.t1 | AT4G18960 | 29.545 | 132 | 77 | 2 | 54 | 177 | 55 | 178 | 5.59e-12 | 63.9 |
MS.gene71222.t1 | AT1G69540 | 37.179 | 78 | 49 | 0 | 1 | 78 | 1 | 78 | 6.91e-12 | 64.7 |
MS.gene71222.t1 | AT3G57230 | 33.058 | 121 | 79 | 2 | 54 | 172 | 16 | 136 | 3.63e-11 | 61.2 |
MS.gene71222.t1 | AT3G57230 | 33.058 | 121 | 79 | 2 | 54 | 172 | 16 | 136 | 3.63e-11 | 61.2 |
MS.gene71222.t1 | AT4G18960 | 28.906 | 128 | 75 | 2 | 54 | 173 | 55 | 174 | 9.17e-11 | 59.7 |
Find 57 sgRNAs with CRISPR-Local
Find 299 sgRNAs with CRISPR-GE
CRISPR-Local
sgRNA_sequence | on_target_score | Position | Region |
---|---|---|---|
AGTTCATTCCTCCCCATTTC+TGG | 0.113966 | 8.3:-36653969 | None:intergenic |
ATTAATTGTGCCAGGGAAAT+TGG | 0.225126 | 8.3:+36652145 | MS.gene71222:intron |
TTGAATATGCAACTGATTCT+TGG | 0.230197 | 8.3:+36648109 | MS.gene71222:CDS |
GTCAGGTTACTTTCTCTAAA+AGG | 0.230609 | 8.3:+36647995 | MS.gene71222:CDS |
TGCTGCTGTAGTAAGTAATT+TGG | 0.241789 | 8.3:-36653808 | None:intergenic |
GCACTACATGGGAGAAGATT+TGG | 0.278447 | 8.3:+36652308 | MS.gene71222:CDS |
GGTGTAGGAGAAAGTGATTC+AGG | 0.323766 | 8.3:+36652653 | MS.gene71222:intron |
AGCTCAGCAGCAGGCACAAT+GGG | 0.328378 | 8.3:+36653759 | MS.gene71222:CDS |
GGATCAACTCCGTGATGGTT+TGG | 0.359484 | 8.3:-36653787 | None:intergenic |
TCTCAAAGAGCTTCAGAGTC+TGG | 0.366659 | 8.3:+36652341 | MS.gene71222:CDS |
AAACAGCATGGAGAAGATAT+TGG | 0.383608 | 8.3:+36651676 | MS.gene71222:intron |
GATCAACTCCGTGATGGTTT+GGG | 0.390387 | 8.3:-36653786 | None:intergenic |
CCATTGTATACCTGCCATCT+TGG | 0.394586 | 8.3:+36654008 | MS.gene71222:CDS |
TTCAAAGAGCTTTCCTTTGT+GGG | 0.396584 | 8.3:-36648091 | None:intergenic |
GGCAGGTATACAATGGTTCC+AGG | 0.399372 | 8.3:-36654001 | None:intergenic |
CACTACATGGGAGAAGATTT+GGG | 0.400493 | 8.3:+36652309 | MS.gene71222:CDS |
CATTTCAGAGCTTCAGAAGA+AGG | 0.410025 | 8.3:+36652545 | MS.gene71222:CDS |
CCGTGAGGAAGCACCAGAAA+TGG | 0.422816 | 8.3:+36653956 | MS.gene71222:CDS |
CTTCTTCTGAAGCTCTGAAA+TGG | 0.425892 | 8.3:-36652544 | None:intergenic |
CGTGAGGAAGCACCAGAAAT+GGG | 0.442611 | 8.3:+36653957 | MS.gene71222:CDS |
ATTCAAAGAGCTTTCCTTTG+TGG | 0.449409 | 8.3:-36648092 | None:intergenic |
TGCAAATGATTCTGAGTCAC+AGG | 0.458014 | 8.3:+36651739 | MS.gene71222:CDS |
AAAGATTGCAGCTCAGCAGC+AGG | 0.474475 | 8.3:+36653750 | MS.gene71222:CDS |
AGAAAACAAGATCAATCGTC+AGG | 0.497892 | 8.3:+36647978 | MS.gene71222:CDS |
TATACAATGGTTCCAGGGTA+AGG | 0.501691 | 8.3:-36653995 | None:intergenic |
ACTAAACATGGGAAGGGGTA+GGG | 0.503033 | 8.3:+36647939 | None:intergenic |
TAAACCCTATAGGCACTACA+TGG | 0.510103 | 8.3:+36652296 | MS.gene71222:intron |
ACCCACCCCATGTTCAAAGT+TGG | 0.514378 | 8.3:-36653835 | None:intergenic |
TTGATTGTCTTCTCCCACAA+AGG | 0.519399 | 8.3:+36648078 | MS.gene71222:CDS |
CACTAAACATGGGAAGGGGT+AGG | 0.525426 | 8.3:+36647938 | None:intergenic |
GCAACTTCCAACTTTGAACA+TGG | 0.531201 | 8.3:+36653828 | MS.gene71222:CDS |
ACTTTCTCTAAAAGGAGAGC+TGG | 0.534012 | 8.3:+36648003 | MS.gene71222:CDS |
GGGGTAGGGTTCAGTTGAAG+AGG | 0.541711 | 8.3:+36647953 | MS.gene71222:CDS |
CTTCAGTCGTGTATACTCAA+TGG | 0.549187 | 8.3:-36652169 | None:intergenic |
TTCATCAAAAGCATCCAAGA+TGG | 0.549395 | 8.3:-36654022 | None:intergenic |
CCATTTCTGGTGCTTCCTCA+CGG | 0.562215 | 8.3:-36653956 | None:intergenic |
AAATGGACTCGTACATGAGT+TGG | 0.563530 | 8.3:-36652527 | None:intergenic |
AACATCACTAAACATGGGAA+GGG | 0.564745 | 8.3:+36647933 | None:intergenic |
AAACATCACTAAACATGGGA+AGG | 0.564857 | 8.3:+36647932 | None:intergenic |
TCAAAAGCATCCAAGATGGC+AGG | 0.571145 | 8.3:-36654018 | None:intergenic |
AACTTCCAACTTTGAACATG+GGG | 0.577960 | 8.3:+36653830 | MS.gene71222:CDS |
CAGCTCAGCAGCAGGCACAA+TGG | 0.578291 | 8.3:+36653758 | MS.gene71222:CDS |
ATAATTATAGATCAAGGAGA+AGG | 0.579249 | 8.3:+36653726 | MS.gene71222:intron |
CAACTTCCAACTTTGAACAT+GGG | 0.579873 | 8.3:+36653829 | MS.gene71222:CDS |
AGATATTGGAGCGCTATGAA+AGG | 0.585116 | 8.3:+36651690 | MS.gene71222:CDS |
AATTTGGATCAACTCCGTGA+TGG | 0.590299 | 8.3:-36653792 | None:intergenic |
AACTAGCTGTCTCTCTGCAT+AGG | 0.614444 | 8.3:-36651717 | None:intergenic |
CATTGAGTATACACGACTGA+AGG | 0.627879 | 8.3:+36652170 | MS.gene71222:CDS |
ACATCACTAAACATGGGAAG+GGG | 0.629498 | 8.3:+36647934 | None:intergenic |
GAATGAACTTGACCTTACCC+TGG | 0.641677 | 8.3:+36653983 | MS.gene71222:CDS |
CCAAGATGGCAGGTATACAA+TGG | 0.642480 | 8.3:-36654008 | None:intergenic |
AAACCCTATAGGCACTACAT+GGG | 0.653686 | 8.3:+36652297 | MS.gene71222:intron |
AGGAAGCACCAGAAATGGGG+AGG | 0.654904 | 8.3:+36653961 | MS.gene71222:CDS |
GCAGGTATACAATGGTTCCA+GGG | 0.659086 | 8.3:-36654000 | None:intergenic |
GTGAGGAAGCACCAGAAATG+GGG | 0.665247 | 8.3:+36653958 | MS.gene71222:CDS |
TGGGAGCACCCAAACCATCA+CGG | 0.666247 | 8.3:+36653778 | MS.gene71222:CDS |
TTGCAGTGGCAATTACCGTG+AGG | 0.714838 | 8.3:+36653941 | MS.gene71222:intron |
CRISPR-GE
badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
---|---|---|---|---|---|
!! | ATTTAAAAAAAAAAAAAAAA+AGG | + | chr8.3:36653091-36653110 | MS.gene71222:intron | 0.0% |
!! | TTTAAAAAAAAAAAAAAAAA+GGG | + | chr8.3:36653092-36653111 | MS.gene71222:intron | 0.0% |
!!! | ATAAATATTTTTTTTAAAAA+AGG | - | chr8.3:36649347-36649366 | None:intergenic | 0.0% |
!! | ACAATTAATTATATTTATAG+GGG | - | chr8.3:36651148-36651167 | None:intergenic | 10.0% |
!! | ATAAGTAAATGTAATATATA+TGG | + | chr8.3:36653033-36653052 | MS.gene71222:intron | 10.0% |
!! | GTACAATTAATTATATTTAT+AGG | - | chr8.3:36651150-36651169 | None:intergenic | 10.0% |
!! | TAAGTAAATGTAATATATAT+GGG | + | chr8.3:36653034-36653053 | MS.gene71222:intron | 10.0% |
!! | TTAAATAAGAAAAATATTAC+AGG | + | chr8.3:36649067-36649086 | MS.gene71222:intron | 10.0% |
!! | TTATATTTATTAAACAGAAA+AGG | - | chr8.3:36651172-36651191 | None:intergenic | 10.0% |
!! | TTATGCTTAAAATTATAAAA+TGG | + | chr8.3:36652908-36652927 | MS.gene71222:intron | 10.0% |
!!! | AAAAAATAAAATGTTTTGAT+CGG | - | chr8.3:36653338-36653357 | None:intergenic | 10.0% |
!!! | AATTTTTTTTTTTTTTGAGT+AGG | - | chr8.3:36652026-36652045 | None:intergenic | 10.0% |
!!! | ATAGCTAATTTTTATTTTTA+AGG | + | chr8.3:36648676-36648695 | MS.gene71222:intron | 10.0% |
!!! | ATGTGTATTATTATTTTTTT+CGG | - | chr8.3:36651415-36651434 | None:intergenic | 10.0% |
!!! | GGATTTTTATATTATATTTT+AGG | + | chr8.3:36650450-36650469 | MS.gene71222:intron | 10.0% |
!!! | TTATTTTTTTTCATGATAAA+TGG | - | chr8.3:36649389-36649408 | None:intergenic | 10.0% |
!!! | TTCTTTTATAACAAAAAATT+TGG | - | chr8.3:36650087-36650106 | None:intergenic | 10.0% |
!!! | TTTTTTTTTTCTTTTCAAAT+TGG | + | chr8.3:36650937-36650956 | MS.gene71222:intron | 10.0% |
!! | AAAAAAAAAAGTTTCAAGAT+TGG | + | chr8.3:36653187-36653206 | MS.gene71222:intron | 15.0% |
!! | AAAAAAAAATCACATACTTT+AGG | - | chr8.3:36648618-36648637 | None:intergenic | 15.0% |
!! | AAACATAAATAAATAGTGTT+TGG | + | chr8.3:36650712-36650731 | MS.gene71222:intron | 15.0% |
!! | AATAATTATATATCCATACT+TGG | + | chr8.3:36649404-36649423 | MS.gene71222:intron | 15.0% |
!! | ATAATTTATACCATATAAAG+TGG | + | chr8.3:36650328-36650347 | MS.gene71222:intron | 15.0% |
!! | ATCAAACAAACTATAATTAA+AGG | - | chr8.3:36653005-36653024 | None:intergenic | 15.0% |
!! | ATGATATGAATAATTAATCA+AGG | + | chr8.3:36653658-36653677 | MS.gene71222:intron | 15.0% |
!! | CTTAAAATAATTATAGATCA+AGG | + | chr8.3:36653720-36653739 | MS.gene71222:intron | 15.0% |
!! | GTATAATAAATATATACAAG+AGG | - | chr8.3:36650873-36650892 | None:intergenic | 15.0% |
!! | TAAAATAAAATTATTTGCAG+TGG | + | chr8.3:36653927-36653946 | MS.gene71222:intron | 15.0% |
!! | TATTCTAGATATATCAATTA+CGG | - | chr8.3:36651937-36651956 | None:intergenic | 15.0% |
!! | TTAAGCATAATTAATTAACA+AGG | - | chr8.3:36652898-36652917 | None:intergenic | 15.0% |
!!! | AAATAAAAAGGTATGAATAT+TGG | - | chr8.3:36648475-36648494 | None:intergenic | 15.0% |
!!! | CTTGATCTATAATTATTTTA+AGG | - | chr8.3:36653722-36653741 | None:intergenic | 15.0% |
!!! | TAAAATGATTTAGTATTTTG+AGG | - | chr8.3:36650762-36650781 | None:intergenic | 15.0% |
!!! | TCTTGAAACTTTTTTTTTTA+TGG | - | chr8.3:36653186-36653205 | None:intergenic | 15.0% |
!!! | TTATTTTTTTCATTTAGTCA+AGG | + | chr8.3:36648831-36648850 | MS.gene71222:intron | 15.0% |
!!! | TTTGTAATTGCATTATATTT+TGG | + | chr8.3:36651113-36651132 | MS.gene71222:intron | 15.0% |
!! | AAAAAAGAAAAGATAAACAC+AGG | - | chr8.3:36648867-36648886 | None:intergenic | 20.0% |
!! | AACAAGAAGGAAAAATAAAA+AGG | - | chr8.3:36648487-36648506 | None:intergenic | 20.0% |
!! | AATAAGAAAAAATAACGTAG+AGG | + | chr8.3:36648645-36648664 | MS.gene71222:intron | 20.0% |
!! | AATAGTTAATTAAGCTTACA+TGG | - | chr8.3:36652968-36652987 | None:intergenic | 20.0% |
!! | ACAAAAAAATCCACTTTATA+TGG | - | chr8.3:36650341-36650360 | None:intergenic | 20.0% |
!! | AGAACAAACTTAAATAACTA+CGG | - | chr8.3:36649174-36649193 | None:intergenic | 20.0% |
!! | AGATATTTACCTAAAATAAG+AGG | + | chr8.3:36653134-36653153 | MS.gene71222:intron | 20.0% |
!! | ATAAGAAAAAATAACGTAGA+GGG | + | chr8.3:36648646-36648665 | MS.gene71222:intron | 20.0% |
!! | ATAATATGAATTTGATCCAA+AGG | - | chr8.3:36653310-36653329 | None:intergenic | 20.0% |
!! | ATAGTTAATTAAGCTTACAT+GGG | - | chr8.3:36652967-36652986 | None:intergenic | 20.0% |
!! | ATTTATGTGTAAAGTGAATT+AGG | + | chr8.3:36648755-36648774 | MS.gene71222:intron | 20.0% |
!! | GAAGAAAAAAAAATAAACAC+AGG | - | chr8.3:36648453-36648472 | None:intergenic | 20.0% |
!! | GAGCTAATTAAATACATAAT+AGG | + | chr8.3:36651616-36651635 | MS.gene71222:intron | 20.0% |
!! | TAACAGAAACATCTAAAAAA+TGG | - | chr8.3:36650617-36650636 | None:intergenic | 20.0% |
!! | TGAAGTATGTATATTTACTT+TGG | + | chr8.3:36652493-36652512 | MS.gene71222:intron | 20.0% |
!! | TTGATCTAAACAAAAAACAA+AGG | - | chr8.3:36648585-36648604 | None:intergenic | 20.0% |
!! | TTTCTAATTTCTGTTTAGTT+AGG | - | chr8.3:36652057-36652076 | None:intergenic | 20.0% |
!!! | AAACATAAATGAAAAGTGTT+TGG | - | chr8.3:36650833-36650852 | None:intergenic | 20.0% |
!!! | ATAATTATTTTAAGGCCAAA+AGG | - | chr8.3:36653714-36653733 | None:intergenic | 20.0% |
!!! | CTATATCGTCATTATTATTT+TGG | - | chr8.3:36651806-36651825 | None:intergenic | 20.0% |
!!! | CTTTTCTGTTAAATATAAAC+AGG | + | chr8.3:36649939-36649958 | MS.gene71222:intron | 20.0% |
!!! | TAAGAGGTTTGTTTTTTTAT+TGG | + | chr8.3:36651260-36651279 | MS.gene71222:intron | 20.0% |
!!! | TATTTTAGGTAAATATCTAC+TGG | - | chr8.3:36653132-36653151 | None:intergenic | 20.0% |
!!! | TCATATTTTTTCTCTTGATA+AGG | + | chr8.3:36649210-36649229 | MS.gene71222:intron | 20.0% |
!!! | TTGATAAGACTTTTGAAATA+AGG | + | chr8.3:36651570-36651589 | MS.gene71222:intron | 20.0% |
!!! | TTTATTTTCTTTTGTGCAAT+AGG | + | chr8.3:36652730-36652749 | MS.gene71222:intron | 20.0% |
!!! | TTTGGTTTTCGATTAATAAT+GGG | - | chr8.3:36651788-36651807 | None:intergenic | 20.0% |
!!! | TTTTGGTTTTCGATTAATAA+TGG | - | chr8.3:36651789-36651808 | None:intergenic | 20.0% |
! | AAAAAAAGGGAGTCTAAATA+TGG | + | chr8.3:36653105-36653124 | MS.gene71222:intron | 25.0% |
! | AAAAATTGAAGTGCAAATTG+AGG | - | chr8.3:36650984-36651003 | None:intergenic | 25.0% |
! | AAAATAGTAAGATTCACCTT+TGG | + | chr8.3:36653291-36653310 | MS.gene71222:intron | 25.0% |
! | AAGTGAAAAAGGAAAAAACA+AGG | - | chr8.3:36648907-36648926 | None:intergenic | 25.0% |
! | AATATGATCCAAATCCAAAA+TGG | - | chr8.3:36653438-36653457 | None:intergenic | 25.0% |
! | AATTGCTTCTTACTTAATAG+TGG | - | chr8.3:36653508-36653527 | None:intergenic | 25.0% |
! | ACATCTAAAAAATGGTCTAA+AGG | - | chr8.3:36650609-36650628 | None:intergenic | 25.0% |
! | ATAATTATAGATCAAGGAGA+AGG | + | chr8.3:36653726-36653745 | MS.gene71222:intron | 25.0% |
! | ATATAGATGAAACACCAAAA+AGG | - | chr8.3:36651313-36651332 | None:intergenic | 25.0% |
! | ATGTGAAGAAAATCAAACTA+GGG | - | chr8.3:36649507-36649526 | None:intergenic | 25.0% |
! | ATTATAGCATACATGATACA+TGG | + | chr8.3:36649469-36649488 | MS.gene71222:intron | 25.0% |
! | ATTGCTTCTTACTTAATAGT+GGG | - | chr8.3:36653507-36653526 | None:intergenic | 25.0% |
! | CAATAAATCCAGTAAAAGAA+AGG | - | chr8.3:36649146-36649165 | None:intergenic | 25.0% |
! | CAATATATATGACTTAGTGA+GGG | + | chr8.3:36652940-36652959 | MS.gene71222:intron | 25.0% |
! | CATATATACTTCTCTCAAAA+GGG | + | chr8.3:36648723-36648742 | MS.gene71222:intron | 25.0% |
! | TAAAATAAGAGGTCAAGATA+GGG | + | chr8.3:36653145-36653164 | MS.gene71222:intron | 25.0% |
! | TATCAGAATATATGTACTCA+TGG | - | chr8.3:36650210-36650229 | None:intergenic | 25.0% |
! | TATGTGAAGAAAATCAAACT+AGG | - | chr8.3:36649508-36649527 | None:intergenic | 25.0% |
! | TCAACTCATCATAAAATTGA+GGG | - | chr8.3:36650646-36650665 | None:intergenic | 25.0% |
! | TCAATATATATGACTTAGTG+AGG | + | chr8.3:36652939-36652958 | MS.gene71222:intron | 25.0% |
! | TCATATATACTTCTCTCAAA+AGG | + | chr8.3:36648722-36648741 | MS.gene71222:intron | 25.0% |
! | TTATAGTATGTCATAAACCT+AGG | - | chr8.3:36652594-36652613 | None:intergenic | 25.0% |
! | TTTGGATTTGGATCATATTA+GGG | + | chr8.3:36653439-36653458 | MS.gene71222:intron | 25.0% |
!! | ATCTTTTGCAAAGAAACTAT+AGG | + | chr8.3:36652202-36652221 | MS.gene71222:CDS | 25.0% |
!! | ATTATATTTATAGGGGTACA+AGG | - | chr8.3:36651141-36651160 | None:intergenic | 25.0% |
!! | CAAACTATAATTAAAGGTGT+TGG | - | chr8.3:36652999-36653018 | None:intergenic | 25.0% |
!! | CAATAATTTTCTACCAAGTA+TGG | - | chr8.3:36649420-36649439 | None:intergenic | 25.0% |
!! | CTTTGTAGTTTTTATCTTAC+CGG | + | chr8.3:36651346-36651365 | MS.gene71222:intron | 25.0% |
!! | GGTATTCTTTAATTTACCAT+TGG | + | chr8.3:36652751-36652770 | MS.gene71222:intron | 25.0% |
!! | TAATTGTCACAACTTCATTT+TGG | + | chr8.3:36649693-36649712 | MS.gene71222:intron | 25.0% |
!! | TGTTTAATTGTACCTTTTGT+GGG | + | chr8.3:36651205-36651224 | MS.gene71222:intron | 25.0% |
!! | TTATATTTATAGGGGTACAA+GGG | - | chr8.3:36651140-36651159 | None:intergenic | 25.0% |
!! | TTATTGGTGTTTAAGATGTA+TGG | + | chr8.3:36651276-36651295 | MS.gene71222:intron | 25.0% |
!! | TTGTTTAATTGTACCTTTTG+TGG | + | chr8.3:36651204-36651223 | MS.gene71222:intron | 25.0% |
!! | TTTTGGATTTGGATCATATT+AGG | + | chr8.3:36653438-36653457 | MS.gene71222:intron | 25.0% |
!! | TTTTTCTTTTCAAATTGGCA+TGG | + | chr8.3:36650942-36650961 | MS.gene71222:intron | 25.0% |
!!! | AGGCTTTTTTACTCAAATAA+AGG | + | chr8.3:36648775-36648794 | MS.gene71222:intron | 25.0% |
!!! | ATAAAGTGGATTTTTTTGTG+TGG | + | chr8.3:36650342-36650361 | MS.gene71222:intron | 25.0% |
!!! | GACGATATAGTTTTAAATTG+TGG | + | chr8.3:36651816-36651835 | MS.gene71222:intron | 25.0% |
!!! | GGCTTTTTTACTCAAATAAA+GGG | + | chr8.3:36648776-36648795 | MS.gene71222:intron | 25.0% |
!!! | TATATAGAGGTATTCTTCTA+TGG | + | chr8.3:36650685-36650704 | MS.gene71222:intron | 25.0% |
!!! | TTTTTTCAAATACCTTGATG+AGG | + | chr8.3:36649538-36649557 | MS.gene71222:intron | 25.0% |
AACACGTATTTAAACAAACC+AGG | + | chr8.3:36649857-36649876 | MS.gene71222:intron | 30.0% | |
AGATCTTCTGAGTGTTTATT+TGG | + | chr8.3:36651043-36651062 | MS.gene71222:intron | 30.0% | |
AGCAAATGATGCTTCTATAT+AGG | - | chr8.3:36649743-36649762 | None:intergenic | 30.0% | |
AGCTTGTCATGATTTATCAT+TGG | + | chr8.3:36651542-36651561 | MS.gene71222:intron | 30.0% | |
ATCAGTTTATTAATTGTGCC+AGG | + | chr8.3:36652137-36652156 | MS.gene71222:intron | 30.0% | |
ATGATCATTTCTTGGTACAA+TGG | + | chr8.3:36652795-36652814 | MS.gene71222:intron | 30.0% | |
ATGATCGTAACTACTAATGA+AGG | - | chr8.3:36653898-36653917 | None:intergenic | 30.0% | |
ATTATGACACTAAACCCTAT+AGG | + | chr8.3:36652286-36652305 | MS.gene71222:intron | 30.0% | |
CATTGTAAGCTTGTATATAG+AGG | + | chr8.3:36650672-36650691 | MS.gene71222:intron | 30.0% | |
CTAAAATAAGAGGTCAAGAT+AGG | + | chr8.3:36653144-36653163 | MS.gene71222:intron | 30.0% | |
CTCAACTCATCATAAAATTG+AGG | - | chr8.3:36650647-36650666 | None:intergenic | 30.0% | |
GAATAACATGCTTGCAAAAA+AGG | + | chr8.3:36652680-36652699 | MS.gene71222:CDS | 30.0% | |
GTAATAATCTCTAAACAGCA+TGG | + | chr8.3:36651664-36651683 | MS.gene71222:intron | 30.0% | |
GTCATAGCTTCATTAGAATA+GGG | - | chr8.3:36653583-36653602 | None:intergenic | 30.0% | |
TACCAAGAAATGATCATATC+CGG | - | chr8.3:36652792-36652811 | None:intergenic | 30.0% | |
TCAGTTTATTAATTGTGCCA+GGG | + | chr8.3:36652138-36652157 | MS.gene71222:intron | 30.0% | |
TCCAACAAACAAAATGACAA+TGG | - | chr8.3:36650433-36650452 | None:intergenic | 30.0% | |
TGATTACAGCCAATACTATA+GGG | - | chr8.3:36649838-36649857 | None:intergenic | 30.0% | |
TGTCATAGCTTCATTAGAAT+AGG | - | chr8.3:36653584-36653603 | None:intergenic | 30.0% | |
TGTGTGGATAGATTATAATG+TGG | + | chr8.3:36650358-36650377 | MS.gene71222:intron | 30.0% | |
TTGATTACAGCCAATACTAT+AGG | - | chr8.3:36649839-36649858 | None:intergenic | 30.0% | |
! | AAACATGTCCTTTCTTTTAC+TGG | + | chr8.3:36649135-36649154 | MS.gene71222:intron | 30.0% |
! | AATCTTTAGACTCCCTTTTA+AGG | - | chr8.3:36653071-36653090 | None:intergenic | 30.0% |
! | AGAAGGGTTTGTATATTTTG+GGG | + | chr8.3:36648515-36648534 | MS.gene71222:intron | 30.0% |
! | AGTTTTTCTTTCAGTTCGAT+TGG | + | chr8.3:36650029-36650048 | MS.gene71222:intron | 30.0% |
! | GAGAAGGGTTTGTATATTTT+GGG | + | chr8.3:36648514-36648533 | MS.gene71222:intron | 30.0% |
! | GTTTAATTGTACCTTTTGTG+GGG | + | chr8.3:36651206-36651225 | MS.gene71222:intron | 30.0% |
! | TATATTTATAGGGGTACAAG+GGG | - | chr8.3:36651139-36651158 | None:intergenic | 30.0% |
! | TATTACAGGACAGAGTTTTA+TGG | + | chr8.3:36649081-36649100 | MS.gene71222:intron | 30.0% |
! | TGAGAAGGGTTTGTATATTT+TGG | + | chr8.3:36648513-36648532 | MS.gene71222:intron | 30.0% |
! | TGATTTTCTCCCTATAGTAT+TGG | + | chr8.3:36649826-36649845 | MS.gene71222:intron | 30.0% |
! | TTGAATATGCAACTGATTCT+TGG | + | chr8.3:36648109-36648128 | MS.gene71222:CDS | 30.0% |
! | TTGAGAAGGTTTCTTTTGTT+TGG | + | chr8.3:36648925-36648944 | MS.gene71222:intron | 30.0% |
! | TTTAATTGTACCTTTTGTGG+GGG | + | chr8.3:36651207-36651226 | MS.gene71222:intron | 30.0% |
! | TTTCTTCCAAATCTGATTTG+TGG | + | chr8.3:36648987-36649006 | MS.gene71222:intron | 30.0% |
!! | CTATAATTAAAGGTGTTGGA+TGG | - | chr8.3:36652995-36653014 | None:intergenic | 30.0% |
!! | TGAGAAGGTTTCTTTTGTTT+GGG | + | chr8.3:36648926-36648945 | MS.gene71222:intron | 30.0% |
!! | TTTTCCTTTTTCACTTGAGA+AGG | + | chr8.3:36648911-36648930 | MS.gene71222:intron | 30.0% |
!!! | ACAAGTTTTTTCTTGAGTCA+AGG | + | chr8.3:36648417-36648436 | MS.gene71222:intron | 30.0% |
!!! | AGTTTTAGAAGTCTCAACAT+CGG | + | chr8.3:36651870-36651889 | MS.gene71222:intron | 30.0% |
!!! | CTATCTTGACCTCTTATTTT+AGG | - | chr8.3:36653146-36653165 | None:intergenic | 30.0% |
!!! | CTTGGTTTTGGTGTTTATTT+GGG | + | chr8.3:36651236-36651255 | MS.gene71222:intron | 30.0% |
!!! | TCCATTGTCATTTTGTTTGT+TGG | + | chr8.3:36650429-36650448 | MS.gene71222:intron | 30.0% |
AAACAGCATGGAGAAGATAT+TGG | + | chr8.3:36651676-36651695 | MS.gene71222:intron | 35.0% | |
AACTTCCAACTTTGAACATG+GGG | + | chr8.3:36653830-36653849 | MS.gene71222:CDS | 35.0% | |
ACCATTAGTATCACTGTATC+AGG | - | chr8.3:36649032-36649051 | None:intergenic | 35.0% | |
ACCTAACCACAAATCAGATT+TGG | - | chr8.3:36648996-36649015 | None:intergenic | 35.0% | |
ACCTGATACAGTGATACTAA+TGG | + | chr8.3:36649028-36649047 | MS.gene71222:intron | 35.0% | |
AGAAAACAAGATCAATCGTC+AGG | + | chr8.3:36647978-36647997 | MS.gene71222:CDS | 35.0% | |
AGATATATCAATTACGGTCG+AGG | - | chr8.3:36651931-36651950 | None:intergenic | 35.0% | |
ATATTAGGGTTTCCTTGCTA+TGG | + | chr8.3:36653453-36653472 | MS.gene71222:intron | 35.0% | |
ATCCGGATATGATCATTTCT+TGG | + | chr8.3:36652787-36652806 | MS.gene71222:intron | 35.0% | |
ATGATCCAAATCCAAAATGG+TGG | - | chr8.3:36653435-36653454 | None:intergenic | 35.0% | |
ATTAATTGTGCCAGGGAAAT+TGG | + | chr8.3:36652145-36652164 | MS.gene71222:intron | 35.0% | |
ATTCAAAGAGCTTTCCTTTG+TGG | - | chr8.3:36648095-36648114 | None:intergenic | 35.0% | |
CAACTTCCAACTTTGAACAT+GGG | + | chr8.3:36653829-36653848 | MS.gene71222:CDS | 35.0% | |
CAGCAGTGGTAGTATAATAT+TGG | + | chr8.3:36651962-36651981 | MS.gene71222:intron | 35.0% | |
CTTCTGAGTGTTTATTTGGA+GGG | + | chr8.3:36651047-36651066 | MS.gene71222:intron | 35.0% | |
GAAACCTTCTCAAGTGAAAA+AGG | - | chr8.3:36648918-36648937 | None:intergenic | 35.0% | |
GAATTCAAAGTCTCAAACTG+TGG | + | chr8.3:36653550-36653569 | MS.gene71222:intron | 35.0% | |
TACCAATTCAGTCAATCTGA+AGG | + | chr8.3:36651452-36651471 | MS.gene71222:intron | 35.0% | |
TCAGTAAGAGTGACAGTATT+TGG | + | chr8.3:36649666-36649685 | MS.gene71222:intron | 35.0% | |
TCTTCTGAGTGTTTATTTGG+AGG | + | chr8.3:36651046-36651065 | MS.gene71222:intron | 35.0% | |
TGCTGCTGTAGTAAGTAATT+TGG | - | chr8.3:36653811-36653830 | None:intergenic | 35.0% | |
TTCAAAGAGCTTTCCTTTGT+GGG | - | chr8.3:36648094-36648113 | None:intergenic | 35.0% | |
TTCTTGTTCTCACTTGAGAA+GGG | + | chr8.3:36648499-36648518 | MS.gene71222:intron | 35.0% | |
TTTCTTTCAGTTCGATTGGA+CGG | + | chr8.3:36650033-36650052 | MS.gene71222:intron | 35.0% | |
! | ATCAAACTAGGGTTTTCTAC+AGG | - | chr8.3:36649496-36649515 | None:intergenic | 35.0% |
! | GTCAGGTTACTTTCTCTAAA+AGG | + | chr8.3:36647995-36648014 | MS.gene71222:CDS | 35.0% |
! | GTGTTGCTCAAGCATTAATA+TGG | + | chr8.3:36653528-36653547 | MS.gene71222:intron | 35.0% |
! | TATTAGGGTTTCCTTGCTAT+GGG | + | chr8.3:36653454-36653473 | MS.gene71222:intron | 35.0% |
! | TCCAAATCTGATTTGTGGTT+AGG | + | chr8.3:36648992-36649011 | MS.gene71222:intron | 35.0% |
! | TCTAGAATAAACAACAGCAG+TGG | + | chr8.3:36651948-36651967 | MS.gene71222:intron | 35.0% |
! | TGGTGTATGCATTTCCTTTT+TGG | + | chr8.3:36651296-36651315 | MS.gene71222:intron | 35.0% |
! | TGGTGTTTATTTGGGTTAAG+AGG | + | chr8.3:36651244-36651263 | MS.gene71222:intron | 35.0% |
! | TTAATTGTACCTTTTGTGGG+GGG | + | chr8.3:36651208-36651227 | MS.gene71222:intron | 35.0% |
! | TTATGTTGCATGACACCTTT+TGG | + | chr8.3:36653696-36653715 | MS.gene71222:intron | 35.0% |
! | TTCTTACTTAATAGTGGGAG+TGG | - | chr8.3:36653502-36653521 | None:intergenic | 35.0% |
!! | AATGGACTACATGCTATAGT+GGG | - | chr8.3:36653407-36653426 | None:intergenic | 35.0% |
!! | GAAGGGTTTGTATATTTTGG+GGG | + | chr8.3:36648516-36648535 | MS.gene71222:intron | 35.0% |
!!! | GCTTGGTTTTGGTGTTTATT+TGG | + | chr8.3:36651235-36651254 | MS.gene71222:intron | 35.0% |
!!! | TTTAGACTCCCTTTTAAGGT+GGG | - | chr8.3:36653067-36653086 | None:intergenic | 35.0% |
AAACCCTATAGGCACTACAT+GGG | + | chr8.3:36652297-36652316 | MS.gene71222:intron | 40.0% | |
AACCTAGGCTACACAAAGAT+TGG | - | chr8.3:36652579-36652598 | None:intergenic | 40.0% | |
AATTTGGATCAACTCCGTGA+TGG | - | chr8.3:36653795-36653814 | None:intergenic | 40.0% | |
ACAGGACTTATATTCTTGCC+TGG | + | chr8.3:36649957-36649976 | MS.gene71222:intron | 40.0% | |
AGCCTTCAGATTGACTGAAT+TGG | - | chr8.3:36651457-36651476 | None:intergenic | 40.0% | |
AGTCAATCTGAAGGCTAAAG+TGG | + | chr8.3:36651461-36651480 | MS.gene71222:intron | 40.0% | |
ATCACTTTCTCCTACACCAA+AGG | - | chr8.3:36652651-36652670 | None:intergenic | 40.0% | |
CACTACATGGGAGAAGATTT+GGG | + | chr8.3:36652309-36652328 | MS.gene71222:CDS | 40.0% | |
CATCGGCATTACCAATATCA+AGG | + | chr8.3:36651887-36651906 | MS.gene71222:intron | 40.0% | |
CATTGAGTATACACGACTGA+AGG | + | chr8.3:36652170-36652189 | MS.gene71222:CDS | 40.0% | |
CATTTCAGAGCTTCAGAAGA+AGG | + | chr8.3:36652545-36652564 | MS.gene71222:CDS | 40.0% | |
CTATAGCATGTAGTCCATTC+AGG | + | chr8.3:36653408-36653427 | MS.gene71222:intron | 40.0% | |
CTTCAGTCGTGTATACTCAA+TGG | - | chr8.3:36652172-36652191 | None:intergenic | 40.0% | |
CTTCTCAAGTGAGAACAAGA+AGG | - | chr8.3:36648500-36648519 | None:intergenic | 40.0% | |
CTTCTTGTTCTCACTTGAGA+AGG | + | chr8.3:36648498-36648517 | MS.gene71222:intron | 40.0% | |
GAAGATTAAGCACCTCATCA+AGG | - | chr8.3:36649632-36649651 | None:intergenic | 40.0% | |
GATCAAGCAGCATTAACCAA+TGG | - | chr8.3:36652770-36652789 | None:intergenic | 40.0% | |
GCAACTTCCAACTTTGAACA+TGG | + | chr8.3:36653828-36653847 | MS.gene71222:CDS | 40.0% | |
GCTTAAGTCCATTCAAAGCA+TGG | + | chr8.3:36649898-36649917 | MS.gene71222:intron | 40.0% | |
GGGAAATTAATCCCATAGCA+AGG | - | chr8.3:36653468-36653487 | None:intergenic | 40.0% | |
GGGATTGTCTAATATGAACC+CGG | + | chr8.3:36650471-36650490 | MS.gene71222:intron | 40.0% | |
GTGTTTATTTGGAGGGTCTT+TGG | + | chr8.3:36651054-36651073 | MS.gene71222:intron | 40.0% | |
TAAACCCTATAGGCACTACA+TGG | + | chr8.3:36652296-36652315 | MS.gene71222:intron | 40.0% | |
TATACAATGGTTCCAGGGTA+AGG | - | chr8.3:36653998-36654017 | None:intergenic | 40.0% | |
TATCGACACAATTGCAGTTG+CGG | - | chr8.3:36651843-36651862 | None:intergenic | 40.0% | |
TATGTTGCGAGCCTTGATAT+TGG | - | chr8.3:36651901-36651920 | None:intergenic | 40.0% | |
TCAAAGTCTCAAACTGTGGT+GGG | + | chr8.3:36653554-36653573 | MS.gene71222:intron | 40.0% | |
TGCAAATGATTCTGAGTCAC+AGG | + | chr8.3:36651739-36651758 | MS.gene71222:CDS | 40.0% | |
TGTTCGTCTTGAACAAGACT+TGG | + | chr8.3:36651373-36651392 | MS.gene71222:intron | 40.0% | |
TTCAAAGTCTCAAACTGTGG+TGG | + | chr8.3:36653553-36653572 | MS.gene71222:intron | 40.0% | |
TTCAAAGTGAACACAACACC+TGG | - | chr8.3:36649878-36649897 | None:intergenic | 40.0% | |
TTGATTGTCTTCTCCCACAA+AGG | + | chr8.3:36648078-36648097 | MS.gene71222:CDS | 40.0% | |
TTGGTCACACACACATAACA+AGG | + | chr8.3:36650731-36650750 | MS.gene71222:intron | 40.0% | |
! | AAATGGACTCGTACATGAGT+TGG | - | chr8.3:36652530-36652549 | None:intergenic | 40.0% |
! | AATAGTGGGAGTGGTAACAA+AGG | - | chr8.3:36653493-36653512 | None:intergenic | 40.0% |
! | ACTTTCTCTAAAAGGAGAGC+TGG | + | chr8.3:36648003-36648022 | MS.gene71222:CDS | 40.0% |
! | AGATATTGGAGCGCTATGAA+AGG | + | chr8.3:36651690-36651709 | MS.gene71222:CDS | 40.0% |
! | AGGTTCTGCATTGATAAGAC+TGG | - | chr8.3:36649723-36649742 | None:intergenic | 40.0% |
! | ATGCTCTCTAGTTTCTTGCT+TGG | + | chr8.3:36651090-36651109 | MS.gene71222:intron | 40.0% |
! | TACCTTGATGAGGTGCTTAA+TGG | + | chr8.3:36649548-36649567 | MS.gene71222:intron | 40.0% |
! | TCTTGCTTCCATGCTTTGAA+TGG | - | chr8.3:36649909-36649928 | None:intergenic | 40.0% |
! | TGATGAGGTGCTTAATCTTC+TGG | + | chr8.3:36649632-36649651 | MS.gene71222:intron | 40.0% |
! | TTGGTTAATGCTGCTTGATC+CGG | + | chr8.3:36652770-36652789 | MS.gene71222:intron | 40.0% |
!! | CAAGAAACTAGAGAGCATTG+AGG | - | chr8.3:36651088-36651107 | None:intergenic | 40.0% |
!! | CTTCTTCTGAAGCTCTGAAA+TGG | - | chr8.3:36652547-36652566 | None:intergenic | 40.0% |
!! | CTTTAGACTCCCTTTTAAGG+TGG | - | chr8.3:36653068-36653087 | None:intergenic | 40.0% |
!! | GAATGGACTACATGCTATAG+TGG | - | chr8.3:36653408-36653427 | None:intergenic | 40.0% |
!! | TATTTTGGGGGCAAAGCTAA+AGG | + | chr8.3:36648528-36648547 | MS.gene71222:intron | 40.0% |
!!! | TTAGACTCCCTTTTAAGGTG+GGG | - | chr8.3:36653066-36653085 | None:intergenic | 40.0% |
AACTAGCTGTCTCTCTGCAT+AGG | - | chr8.3:36651720-36651739 | None:intergenic | 45.0% | |
AACTGACATGTGCTCTCCTT+TGG | + | chr8.3:36652632-36652651 | MS.gene71222:intron | 45.0% | |
ACTCAATGGTCCAATTTCCC+TGG | - | chr8.3:36652158-36652177 | None:intergenic | 45.0% | |
AGTTCATTCCTCCCCATTTC+TGG | - | chr8.3:36653972-36653991 | None:intergenic | 45.0% | |
ATCAATTACGGTCGAGGTTG+AGG | - | chr8.3:36651925-36651944 | None:intergenic | 45.0% | |
CCAAGATGGCAGGTATACAA+TGG | - | chr8.3:36654011-36654030 | None:intergenic | 45.0% | |
CCATTGTATACCTGCCATCT+TGG | + | chr8.3:36654008-36654027 | MS.gene71222:CDS | 45.0% | |
CTAATATGAACCCGGTCCAA+TGG | + | chr8.3:36650479-36650498 | MS.gene71222:intron | 45.0% | |
CTCCAATCTTTGTGTAGCCT+AGG | + | chr8.3:36652574-36652593 | MS.gene71222:intron | 45.0% | |
GAATGAACTTGACCTTACCC+TGG | + | chr8.3:36653983-36654002 | MS.gene71222:CDS | 45.0% | |
GACCATTAAGCACCTCATCA+AGG | - | chr8.3:36649553-36649572 | None:intergenic | 45.0% | |
GATCAACTCCGTGATGGTTT+GGG | - | chr8.3:36653789-36653808 | None:intergenic | 45.0% | |
GCACTACATGGGAGAAGATT+TGG | + | chr8.3:36652308-36652327 | MS.gene71222:CDS | 45.0% | |
GCAGGTATACAATGGTTCCA+GGG | - | chr8.3:36654003-36654022 | None:intergenic | 45.0% | |
GGTGTAGGAGAAAGTGATTC+AGG | + | chr8.3:36652653-36652672 | MS.gene71222:intron | 45.0% | |
TCCAACTTTGAACATGGGGT+GGG | + | chr8.3:36653834-36653853 | MS.gene71222:intron | 45.0% | |
TCTCAAAGAGCTTCAGAGTC+TGG | + | chr8.3:36652341-36652360 | MS.gene71222:CDS | 45.0% | |
TCTCCCATGTAGTGCCTATA+GGG | - | chr8.3:36652303-36652322 | None:intergenic | 45.0% | |
TGGGAGTGGTAACAAAGGAA+GGG | - | chr8.3:36653488-36653507 | None:intergenic | 45.0% | |
TGTTCAAGACGAACAGAGAC+CGG | - | chr8.3:36651368-36651387 | None:intergenic | 45.0% | |
TTCCAACTTTGAACATGGGG+TGG | + | chr8.3:36653833-36653852 | MS.gene71222:intron | 45.0% | |
TTCTCCCATGTAGTGCCTAT+AGG | - | chr8.3:36652304-36652323 | None:intergenic | 45.0% | |
! | AGAGCTTCAGAAGAAGGTAC+AGG | + | chr8.3:36652551-36652570 | MS.gene71222:intron | 45.0% |
! | CACGAAGCACCTAAAAGTTG+AGG | - | chr8.3:36649983-36650002 | None:intergenic | 45.0% |
! | CAGGTCCACCATTTTGGATT+TGG | + | chr8.3:36653427-36653446 | MS.gene71222:intron | 45.0% |
! | TCCATTCAGGTCCACCATTT+TGG | + | chr8.3:36653421-36653440 | MS.gene71222:intron | 45.0% |
!! | GTAGTAGAAGTGTCCACCAT+TGG | - | chr8.3:36650498-36650517 | None:intergenic | 45.0% |
!! | TCAAAAGCATCCAAGATGGC+AGG | - | chr8.3:36654021-36654040 | None:intergenic | 45.0% |
!! | TCCAAAATGGTGGACCTGAA+TGG | - | chr8.3:36653425-36653444 | None:intergenic | 45.0% |
!!! | TAGACTCCCTTTTAAGGTGG+GGG | - | chr8.3:36653065-36653084 | None:intergenic | 45.0% |
!! | AAAATAAAAAGAAATAATTA+AGG | - | chr8.3:36652718-36652737 | None:intergenic | 5.0% |
!! | AAATGAAAAAAAAATTAAAT+TGG | + | chr8.3:36650402-36650421 | MS.gene71222:intron | 5.0% |
!! | TACAATTAATTATATTTATA+GGG | - | chr8.3:36651149-36651168 | None:intergenic | 5.0% |
!!! | GATTTTTATATTATATTTTA+GGG | + | chr8.3:36650451-36650470 | MS.gene71222:intron | 5.0% |
!!! | TAATAATATATAATTTGTTT+TGG | - | chr8.3:36648165-36648184 | None:intergenic | 5.0% |
!!! | TATTTTATAATAATGAAAAA+TGG | + | chr8.3:36653235-36653254 | MS.gene71222:intron | 5.0% |
AAAGATTGCAGCTCAGCAGC+AGG | + | chr8.3:36653750-36653769 | MS.gene71222:CDS | 50.0% | |
ACCCACCCCATGTTCAAAGT+TGG | - | chr8.3:36653838-36653857 | None:intergenic | 50.0% | |
AGCACCTAAAAGTTGAGGCC+AGG | - | chr8.3:36649978-36649997 | None:intergenic | 50.0% | |
ATATGAACCCGGTCCAATGG+TGG | + | chr8.3:36650482-36650501 | MS.gene71222:intron | 50.0% | |
CAAGCAAAACCCCCCACAAA+AGG | - | chr8.3:36651220-36651239 | None:intergenic | 50.0% | |
GAGCTTCCCCCACCTTAAAA+GGG | + | chr8.3:36653056-36653075 | MS.gene71222:intron | 50.0% | |
GGATCAACTCCGTGATGGTT+TGG | - | chr8.3:36653790-36653809 | None:intergenic | 50.0% | |
GGCAGGTATACAATGGTTCC+AGG | - | chr8.3:36654004-36654023 | None:intergenic | 50.0% | |
GTGGGAGTGGTAACAAAGGA+AGG | - | chr8.3:36653489-36653508 | None:intergenic | 50.0% | |
TTGCAGTGGCAATTACCGTG+AGG | + | chr8.3:36653941-36653960 | MS.gene71222:intron | 50.0% | |
! | CATGTGCTCTCCTTTGGTGT+AGG | + | chr8.3:36652638-36652657 | MS.gene71222:intron | 50.0% |
! | CTTGCCTGGCCTCAACTTTT+AGG | + | chr8.3:36649971-36649990 | MS.gene71222:intron | 50.0% |
! | CTTTTGTGGGGGGTTTTGCT+TGG | + | chr8.3:36651218-36651237 | MS.gene71222:intron | 50.0% |
! | TGGGGGGTTTTGCTTGGTTT+TGG | + | chr8.3:36651224-36651243 | MS.gene71222:intron | 50.0% |
!! | AGAAGTGTCCACCATTGGAC+CGG | - | chr8.3:36650493-36650512 | None:intergenic | 50.0% |
!! | CCATTTCTGGTGCTTCCTCA+CGG | - | chr8.3:36653959-36653978 | None:intergenic | 50.0% |
!! | CGTGAGGAAGCACCAGAAAT+GGG | + | chr8.3:36653957-36653976 | MS.gene71222:CDS | 50.0% |
!! | GTGAGGAAGCACCAGAAATG+GGG | + | chr8.3:36653958-36653977 | MS.gene71222:CDS | 50.0% |
AGCTCAGCAGCAGGCACAAT+GGG | + | chr8.3:36653759-36653778 | MS.gene71222:CDS | 55.0% | |
GGAGCTTCCCCCACCTTAAA+AGG | + | chr8.3:36653055-36653074 | MS.gene71222:intron | 55.0% | |
GGGGTAGGGTTCAGTTGAAG+AGG | + | chr8.3:36647953-36647972 | MS.gene71222:CDS | 55.0% | |
! | GAAGTGTCCACCATTGGACC+GGG | - | chr8.3:36650492-36650511 | None:intergenic | 55.0% |
!! | AGGAAGCACCAGAAATGGGG+AGG | + | chr8.3:36653961-36653980 | MS.gene71222:CDS | 55.0% |
!! | CCGTGAGGAAGCACCAGAAA+TGG | + | chr8.3:36653956-36653975 | MS.gene71222:CDS | 55.0% |
!! | TGGGAGCACCCAAACCATCA+CGG | + | chr8.3:36653778-36653797 | MS.gene71222:CDS | 55.0% |
CAGCTCAGCAGCAGGCACAA+TGG | + | chr8.3:36653758-36653777 | MS.gene71222:CDS | 60.0% |
Chromosome | Type | Strat | End | Strand | Name |
---|---|---|---|---|---|
chr8.3 | gene | 36647946 | 36654040 | 36647946 | ID=MS.gene71222 |
chr8.3 | mRNA | 36647946 | 36654040 | 36647946 | ID=MS.gene71222.t1;Parent=MS.gene71222 |
chr8.3 | exon | 36647946 | 36648130 | 36647946 | ID=MS.gene71222.t1.exon1;Parent=MS.gene71222.t1 |
chr8.3 | CDS | 36647946 | 36648130 | 36647946 | ID=cds.MS.gene71222.t1;Parent=MS.gene71222.t1 |
chr8.3 | exon | 36651682 | 36651760 | 36651682 | ID=MS.gene71222.t1.exon2;Parent=MS.gene71222.t1 |
chr8.3 | CDS | 36651682 | 36651760 | 36651682 | ID=cds.MS.gene71222.t1;Parent=MS.gene71222.t1 |
chr8.3 | exon | 36652159 | 36652223 | 36652159 | ID=MS.gene71222.t1.exon3;Parent=MS.gene71222.t1 |
chr8.3 | CDS | 36652159 | 36652223 | 36652159 | ID=cds.MS.gene71222.t1;Parent=MS.gene71222.t1 |
chr8.3 | exon | 36652308 | 36652407 | 36652308 | ID=MS.gene71222.t1.exon4;Parent=MS.gene71222.t1 |
chr8.3 | CDS | 36652308 | 36652407 | 36652308 | ID=cds.MS.gene71222.t1;Parent=MS.gene71222.t1 |
chr8.3 | exon | 36652525 | 36652566 | 36652525 | ID=MS.gene71222.t1.exon5;Parent=MS.gene71222.t1 |
chr8.3 | CDS | 36652525 | 36652566 | 36652525 | ID=cds.MS.gene71222.t1;Parent=MS.gene71222.t1 |
chr8.3 | exon | 36652660 | 36652701 | 36652660 | ID=MS.gene71222.t1.exon6;Parent=MS.gene71222.t1 |
chr8.3 | CDS | 36652660 | 36652701 | 36652660 | ID=cds.MS.gene71222.t1;Parent=MS.gene71222.t1 |
chr8.3 | exon | 36653736 | 36653851 | 36653736 | ID=MS.gene71222.t1.exon7;Parent=MS.gene71222.t1 |
chr8.3 | CDS | 36653736 | 36653851 | 36653736 | ID=cds.MS.gene71222.t1;Parent=MS.gene71222.t1 |
chr8.3 | exon | 36653947 | 36654040 | 36653947 | ID=MS.gene71222.t1.exon8;Parent=MS.gene71222.t1 |
chr8.3 | CDS | 36653947 | 36654040 | 36653947 | ID=cds.MS.gene71222.t1;Parent=MS.gene71222.t1 |
Gene Sequence |
Protein sequence |