AlfalfaGEDB Alfalfa Gene Editing Database

M. sativa cultivar XinJiangDaYe / MS.gene71432

Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71432.t1 MTR_1g075600 91.561 237 20 0 1 237 1 237 4.25e-154 427
MS.gene71432.t1 MTR_1g077360 86.667 225 30 0 1 225 1 225 1.50e-144 403
MS.gene71432.t1 MTR_5g055100 70.042 237 71 0 1 237 1 237 1.27e-121 345
MS.gene71432.t1 MTR_2g085280 68.644 236 74 0 1 236 1 236 1.87e-116 332
MS.gene71432.t1 MTR_2g085250 68.644 236 74 0 1 236 1 236 5.85e-116 331
MS.gene71432.t1 MTR_8g043650 66.667 237 79 0 1 237 1 237 6.29e-115 328
MS.gene71432.t1 MTR_1g012570 68.776 237 74 0 1 237 1 237 5.21e-111 318
MS.gene71432.t1 MTR_1g105920 69.863 219 66 0 1 219 1 219 1.35e-110 317
MS.gene71432.t1 MTR_2g030740 69.198 237 73 0 1 237 1 237 2.16e-110 317
MS.gene71432.t1 MTR_5g053390 68.889 225 70 0 1 225 1 225 1.73e-109 315
MS.gene71432.t1 MTR_5g045560 67.556 225 73 0 1 225 1 225 9.19e-108 310
MS.gene71432.t1 MTR_1g105910 65.778 225 77 0 1 225 1 225 1.25e-107 310
MS.gene71432.t1 MTR_3g030770 64.681 235 65 3 1 225 1 227 5.36e-103 298
MS.gene71432.t1 MTR_3g052920 67.568 222 72 0 1 222 1 222 7.50e-103 298
MS.gene71432.t1 MTR_1g108510 64.681 235 65 3 1 225 1 227 8.21e-103 297
MS.gene71432.t1 MTR_0121s0080 61.603 237 90 1 1 237 1 236 2.37e-102 296
MS.gene71432.t1 MTR_1g105905 63.182 220 81 0 18 237 1 220 4.31e-99 288
MS.gene71432.t1 MTR_2g093190 62.979 235 69 3 1 225 1 227 1.12e-97 284
MS.gene71432.t1 MTR_1g108580 61.261 222 76 2 1 220 1 214 4.52e-94 275
MS.gene71432.t1 MTR_3g052870 63.927 219 60 2 1 219 1 200 1.16e-92 271
MS.gene71432.t1 MTR_1g106070 68.681 182 57 0 1 182 1 182 2.22e-89 262
MS.gene71432.t1 MTR_7g062350 57.848 223 92 2 16 237 27 248 1.62e-84 252
MS.gene71432.t1 MTR_1g075570 77.528 178 26 1 18 195 1 164 1.12e-83 246
MS.gene71432.t1 MTR_0121s0100 70.543 129 38 0 1 129 1 129 4.25e-57 178
MS.gene71432.t1 MTR_3g030780 67.188 128 42 0 1 128 1 128 1.76e-54 171
MS.gene71432.t1 MTR_3g080940 51.282 156 76 0 9 164 9 164 1.88e-51 166
MS.gene71432.t1 MTR_3g067910 71.845 103 29 0 21 123 2 104 2.04e-48 155
MS.gene71432.t1 MTR_2g105290 37.278 169 96 2 5 170 8 169 2.41e-31 114
MS.gene71432.t1 MTR_8g086290 38.037 163 91 2 5 164 8 163 4.23e-31 113
MS.gene71432.t1 MTR_3g067875 85.714 56 8 0 18 73 1 56 1.07e-27 101
MS.gene71432.t1 MTR_7g028448 39.161 143 75 3 22 164 25 155 2.13e-26 100
MS.gene71432.t1 MTR_4g036915 39.161 143 75 3 22 164 25 155 2.13e-26 100
MS.gene71432.t1 MTR_1g108500 57.732 97 20 1 22 118 110 185 4.94e-26 103
MS.gene71432.t1 MTR_4g127140 37.430 179 92 5 5 170 8 179 1.29e-24 96.7
MS.gene71432.t1 MTR_3g067915 51.064 94 46 0 33 126 3 96 2.99e-24 93.2
MS.gene71432.t1 MTR_3g067870 66.176 68 23 0 16 83 83 150 8.49e-23 91.3
MS.gene71432.t1 MTR_1g047550 56.338 71 31 0 9 79 2 72 1.19e-21 88.6
MS.gene71432.t1 MTR_4g131030 41.803 122 52 3 9 111 2 123 3.17e-21 88.6
MS.gene71432.t1 MTR_8g079502 54.930 71 32 0 9 79 2 72 9.05e-21 86.3
MS.gene71432.t1 MTR_8g051580 41.228 114 62 1 9 122 2 110 1.32e-20 85.9
MS.gene71432.t1 MTR_1g054265 49.367 79 40 0 9 87 2 80 6.21e-20 84.0
MS.gene71432.t1 MTR_1g063160 43.810 105 57 2 9 111 2 106 1.02e-19 83.6
MS.gene71432.t1 MTR_8g046350 49.383 81 40 1 9 89 2 81 5.88e-19 81.3
MS.gene71432.t1 MTR_4g094638 53.623 69 32 0 9 77 2 70 8.25e-18 78.6
MS.gene71432.t1 MTR_4g093970 57.576 66 28 0 10 75 29 94 1.62e-17 79.0
MS.gene71432.t1 MTR_4g102530 46.914 81 40 1 10 87 3 83 1.63e-17 78.2
MS.gene71432.t1 MTR_3g005530 50.000 68 34 0 9 76 2 69 5.70e-17 77.4
MS.gene71432.t1 MTR_4g094632 39.048 105 62 1 9 113 2 104 5.86e-17 75.9
MS.gene71432.t1 MTR_8g033220 46.667 75 40 0 10 84 3 77 8.72e-17 77.0
MS.gene71432.t1 MTR_8g033220 46.053 76 41 0 10 85 3 78 9.38e-17 76.6
MS.gene71432.t1 MTR_3g452380 47.297 74 39 0 3 76 11 84 9.52e-17 77.0
MS.gene71432.t1 MTR_1g101970 51.471 68 33 0 9 76 2 69 3.41e-16 74.3
MS.gene71432.t1 MTR_8g033270 50.000 68 34 0 9 76 2 69 3.90e-16 75.5
MS.gene71432.t1 MTR_6g464720 49.275 69 34 1 9 76 2 70 1.17e-15 74.3
MS.gene71432.t1 MTR_1g053070 46.914 81 43 0 9 89 2 82 1.47e-15 73.9
MS.gene71432.t1 MTR_8g087860 50.000 68 34 0 9 76 18 85 1.78e-15 73.6
MS.gene71432.t1 MTR_0003s0590 31.293 147 70 2 9 124 2 148 2.11e-15 73.6
MS.gene71432.t1 MTR_2g017865 30.811 185 86 3 9 164 17 188 2.48e-15 73.6
MS.gene71432.t1 MTR_7g075870 32.258 155 72 4 10 131 3 157 2.92e-15 72.4
MS.gene71432.t1 MTR_2g461710 55.357 56 25 0 9 64 2 57 3.07e-15 68.6
MS.gene71432.t1 MTR_5g021270 40.179 112 59 4 9 114 2 111 4.06e-15 72.4
MS.gene71432.t1 MTR_5g021270 40.179 112 59 4 9 114 2 111 4.08e-15 72.4
MS.gene71432.t1 MTR_4g109830 46.377 69 36 1 9 76 2 70 5.60e-15 72.0
MS.gene71432.t1 MTR_2g009890 46.479 71 38 0 9 79 2 72 6.10e-15 72.8
MS.gene71432.t1 MTR_8g022970 30.814 172 92 6 2 159 9 167 7.02e-15 70.9
MS.gene71432.t1 MTR_5g066180 44.118 68 38 0 9 76 2 69 7.04e-15 71.6
MS.gene71432.t1 MTR_6g015975 47.826 69 35 1 9 76 2 70 7.72e-15 72.0
MS.gene71432.t1 MTR_5g032150 47.143 70 36 1 9 77 2 71 9.97e-15 71.2
MS.gene71432.t1 MTR_5g032520 47.143 70 36 1 9 77 2 71 1.07e-14 71.2
MS.gene71432.t1 MTR_7g016600 46.377 69 36 1 9 76 2 70 2.43e-14 70.5
MS.gene71432.t1 MTR_1g029670 48.485 66 33 1 9 74 2 66 2.84e-14 68.9
MS.gene71432.t1 MTR_3g102570 41.905 105 58 3 9 112 2 104 3.15e-14 70.9
MS.gene71432.t1 MTR_7g075870 32.051 156 72 5 10 131 3 158 4.46e-14 69.3
MS.gene71432.t1 MTR_5g066960 47.368 57 30 0 9 65 2 58 4.57e-14 65.1
MS.gene71432.t1 MTR_5g046790 50.877 57 28 0 9 65 2 58 5.24e-14 68.9
MS.gene71432.t1 MTR_3g088615 48.485 66 33 1 9 74 2 66 6.23e-14 68.2
MS.gene71432.t1 MTR_8g066260 52.632 57 27 0 9 65 2 58 6.32e-14 69.3
MS.gene71432.t1 MTR_5g046870 53.571 56 26 0 9 64 2 57 6.45e-14 66.2
MS.gene71432.t1 MTR_5g031000 44.118 68 38 0 9 76 2 69 6.95e-14 68.9
MS.gene71432.t1 MTR_5g031000 44.118 68 38 0 9 76 2 69 6.96e-14 68.9
MS.gene71432.t1 MTR_4g084740 49.296 71 35 1 9 78 2 72 8.37e-14 70.1
MS.gene71432.t1 MTR_3g084980 55.357 56 25 0 9 64 2 57 8.54e-14 68.9
MS.gene71432.t1 MTR_7g016630 41.667 72 41 1 9 79 2 73 1.37e-13 68.6
MS.gene71432.t1 MTR_7g075850 56.140 57 25 0 9 65 2 58 1.54e-13 68.2
MS.gene71432.t1 MTR_4g109810 50.877 57 28 0 9 65 2 58 1.63e-13 68.2
MS.gene71432.t1 MTR_8g097090 53.571 56 26 0 9 64 2 57 1.81e-13 68.2
MS.gene71432.t1 MTR_3g113030 47.619 63 33 0 9 71 2 64 2.37e-13 67.4
MS.gene71432.t1 MTR_1g038300 55.357 56 25 0 9 64 2 57 5.95e-13 66.2
MS.gene71432.t1 MTR_1g041615 36.449 107 55 2 20 126 17 110 1.04e-12 63.5
MS.gene71432.t1 MTR_4g093030 46.774 62 33 0 9 70 2 63 2.11e-12 63.5
Query id Subject id identity % alignment length mismatches gap openings q. start q. end s. start s. end e-value bit score
MS.gene71432.t1 AT5G60440 47.895 190 90 4 5 190 3 187 4.68e-49 163
MS.gene71432.t1 AT1G01530 42.632 190 101 3 4 192 2 184 6.80e-42 143
MS.gene71432.t1 AT4G36590 40.426 235 119 8 5 226 3 229 2.18e-38 134
MS.gene71432.t1 AT1G65360 38.793 232 113 9 5 223 3 218 9.11e-38 132
MS.gene71432.t1 AT2G24840 46.626 163 80 3 9 167 63 222 3.60e-37 131
MS.gene71432.t1 AT3G04100 29.545 176 108 3 2 167 7 176 5.05e-25 98.2
MS.gene71432.t1 AT1G72350 34.483 174 80 5 9 182 43 182 1.66e-22 92.0
MS.gene71432.t1 AT2G34440 41.441 111 64 1 9 119 2 111 1.49e-21 88.2
MS.gene71432.t1 AT3G66656 36.975 119 71 1 9 123 2 120 4.08e-19 82.0
MS.gene71432.t1 AT1G29962 28.000 175 120 3 5 173 4 178 9.98e-19 81.3
MS.gene71432.t1 AT5G51870 31.746 189 82 5 10 168 3 174 1.09e-17 79.0
MS.gene71432.t1 AT5G62165 35.664 143 63 4 10 123 3 145 1.57e-17 77.4
MS.gene71432.t1 AT5G62165 35.664 143 63 4 10 123 3 145 1.57e-17 77.4
MS.gene71432.t1 AT5G62165 35.664 143 63 4 10 123 3 145 1.57e-17 77.4
MS.gene71432.t1 AT4G22950 45.833 72 39 0 10 81 3 74 2.84e-17 77.0
MS.gene71432.t1 AT5G51870 36.111 144 62 3 10 123 3 146 3.51e-17 77.8
MS.gene71432.t1 AT5G51870 36.111 144 62 3 10 123 13 156 3.89e-17 77.8
MS.gene71432.t1 AT4G22950 33.537 164 99 4 10 169 3 160 4.23e-17 77.4
MS.gene71432.t1 AT4G22950 33.537 164 99 4 10 169 3 160 4.23e-17 77.4
MS.gene71432.t1 AT2G45650 51.471 68 33 0 9 76 2 69 4.84e-17 78.2
MS.gene71432.t1 AT2G45660 50.000 68 34 0 10 77 3 70 4.93e-17 75.9
MS.gene71432.t1 AT5G62165 34.965 143 64 3 10 123 3 145 5.71e-17 77.0
MS.gene71432.t1 AT5G62165 34.965 143 64 3 10 123 3 145 5.71e-17 77.0
MS.gene71432.t1 AT5G62165 34.965 143 64 3 10 123 3 145 5.71e-17 77.0
MS.gene71432.t1 AT5G62165 35.714 140 61 4 10 120 3 142 5.89e-17 75.5
MS.gene71432.t1 AT5G62165 35.714 140 61 4 10 120 3 142 5.89e-17 75.5
MS.gene71432.t1 AT5G62165 35.714 140 61 4 10 120 3 142 5.89e-17 75.5
MS.gene71432.t1 AT5G62165 35.714 140 61 4 10 120 3 142 5.89e-17 75.5
MS.gene71432.t1 AT5G62165 35.714 140 61 4 10 120 3 142 5.89e-17 75.5
MS.gene71432.t1 AT4G09960 42.857 98 51 2 9 101 2 99 6.49e-17 77.0
MS.gene71432.t1 AT5G10140 50.725 69 33 1 9 76 2 70 6.76e-17 75.9
MS.gene71432.t1 AT4G09960 42.857 98 51 2 9 101 3 100 7.12e-17 77.4
MS.gene71432.t1 AT4G09960 42.857 98 51 2 9 101 2 99 7.29e-17 77.0
MS.gene71432.t1 AT5G10140 50.725 69 33 1 9 76 2 70 8.73e-17 75.9
MS.gene71432.t1 AT5G10140 50.725 69 33 1 9 76 2 70 1.01e-16 76.3
MS.gene71432.t1 AT2G45660 50.000 68 34 0 10 77 3 70 1.02e-16 76.6
MS.gene71432.t1 AT4G09960 42.857 98 51 2 9 101 12 109 1.05e-16 77.0
MS.gene71432.t1 AT5G62165 33.750 160 72 4 10 135 3 162 1.13e-16 75.9
MS.gene71432.t1 AT5G62165 33.750 160 72 4 10 135 3 162 1.13e-16 75.9
MS.gene71432.t1 AT3G54340 42.342 111 57 4 9 114 2 110 1.17e-16 76.6
MS.gene71432.t1 AT5G62165 50.746 67 33 0 10 76 3 69 1.46e-16 73.2
MS.gene71432.t1 AT5G10140 50.725 69 33 1 9 76 2 70 1.64e-16 75.1
MS.gene71432.t1 AT4G09960 42.857 98 51 2 9 101 28 125 1.71e-16 76.6
MS.gene71432.t1 AT5G51870 34.932 146 65 3 5 120 21 166 1.80e-16 75.5
MS.gene71432.t1 AT5G51870 35.461 141 61 3 10 120 3 143 2.12e-16 74.7
MS.gene71432.t1 AT4G18960 42.857 105 55 2 2 101 11 115 2.60e-16 76.3
MS.gene71432.t1 AT4G09960 42.857 98 51 2 9 101 97 194 3.33e-16 76.6
MS.gene71432.t1 AT3G57230 45.588 68 37 0 9 76 2 69 3.69e-16 73.2
MS.gene71432.t1 AT1G28460 27.326 172 122 1 5 173 4 175 4.02e-16 74.3
MS.gene71432.t1 AT5G51860 31.053 190 90 4 10 169 3 181 4.56e-16 74.7
MS.gene71432.t1 AT5G51860 50.746 67 33 0 10 76 3 69 6.22e-16 73.9
MS.gene71432.t1 AT2G22540 48.529 68 35 0 9 76 2 69 9.11e-16 74.3
MS.gene71432.t1 AT2G22540 48.529 68 35 0 9 76 2 69 9.11e-16 74.3
MS.gene71432.t1 AT5G13790 51.471 68 33 0 9 76 2 69 1.23e-15 74.3
MS.gene71432.t1 AT5G13790 51.471 68 33 0 9 76 2 69 1.31e-15 74.3
MS.gene71432.t1 AT3G57230 45.588 68 37 0 9 76 2 69 1.72e-15 73.6
MS.gene71432.t1 AT3G57230 45.588 68 37 0 9 76 2 69 1.72e-15 73.6
MS.gene71432.t1 AT1G28450 27.429 175 121 3 5 173 4 178 2.06e-15 72.4
MS.gene71432.t1 AT4G37940 47.059 68 36 0 9 76 2 69 2.45e-15 72.0
MS.gene71432.t1 AT4G37940 47.059 68 36 0 9 76 2 69 2.54e-15 72.8
MS.gene71432.t1 AT4G37940 47.059 68 36 0 9 76 2 69 2.64e-15 72.8
MS.gene71432.t1 AT2G42830 43.421 76 43 0 1 76 9 84 2.86e-15 73.2
MS.gene71432.t1 AT2G42830 43.421 76 43 0 1 76 9 84 3.19e-15 73.2
MS.gene71432.t1 AT4G24540 48.529 68 35 0 9 76 2 69 3.67e-15 72.4
MS.gene71432.t1 AT3G57390 48.529 68 35 0 9 76 2 69 4.10e-15 72.4
MS.gene71432.t1 AT3G30260 31.507 146 70 5 9 124 2 147 4.46e-15 72.8
MS.gene71432.t1 AT3G58780 47.059 68 36 0 9 76 17 84 4.49e-15 72.8
MS.gene71432.t1 AT2G22630 47.059 68 36 0 9 76 2 69 4.58e-15 72.4
MS.gene71432.t1 AT2G22630 47.059 68 36 0 9 76 2 69 4.58e-15 72.4
MS.gene71432.t1 AT1G22130 40.404 99 58 1 9 106 2 100 5.04e-15 73.6
MS.gene71432.t1 AT3G58780 47.059 68 36 0 9 76 23 90 5.11e-15 72.4
MS.gene71432.t1 AT1G77980 44.318 88 48 1 9 95 2 89 5.23e-15 73.6
MS.gene71432.t1 AT5G23260 50.667 75 35 1 5 77 14 88 7.62e-15 72.4
MS.gene71432.t1 AT3G58780 44.000 75 42 0 2 76 10 84 8.45e-15 72.4
MS.gene71432.t1 AT5G23260 50.667 75 35 1 5 77 14 88 8.69e-15 72.0
MS.gene71432.t1 AT3G57390 48.529 68 35 0 9 76 2 69 8.73e-15 72.0
MS.gene71432.t1 AT5G60910 29.756 205 100 7 9 179 2 196 1.41e-14 71.2
MS.gene71432.t1 AT1G17310 51.899 79 36 1 8 86 47 123 1.43e-14 70.9
MS.gene71432.t1 AT5G20240 47.143 70 35 1 9 76 2 71 1.63e-14 70.5
MS.gene71432.t1 AT1G69120 31.973 147 84 3 9 155 2 132 1.69e-14 70.9
MS.gene71432.t1 AT5G65050 47.826 69 35 1 9 76 2 70 1.70e-14 69.7
MS.gene71432.t1 AT5G20240 47.143 70 35 1 9 76 2 71 1.72e-14 68.9
MS.gene71432.t1 AT3G58780 29.775 178 90 4 9 164 17 181 1.82e-14 70.9
MS.gene71432.t1 AT4G11880 57.143 56 24 0 10 65 3 58 1.88e-14 69.7
MS.gene71432.t1 AT4G11880 57.143 56 24 0 10 65 3 58 1.88e-14 69.7
MS.gene71432.t1 AT1G17310 51.899 79 36 1 8 86 58 134 1.91e-14 70.5
MS.gene71432.t1 AT5G65070 33.557 149 86 4 9 152 2 142 2.26e-14 68.6
MS.gene71432.t1 AT5G65050 33.582 134 64 5 9 124 2 128 2.36e-14 69.3
MS.gene71432.t1 AT5G65050 32.857 140 68 5 9 124 2 139 2.44e-14 69.3
MS.gene71432.t1 AT5G23260 52.113 71 32 1 9 77 2 72 2.47e-14 70.5
MS.gene71432.t1 AT5G65050 32.857 140 68 5 9 124 2 139 2.57e-14 69.7
MS.gene71432.t1 AT5G23260 52.113 71 32 1 9 77 2 72 2.78e-14 70.1
MS.gene71432.t1 AT2G22540 48.529 68 30 1 9 76 2 64 2.80e-14 70.1
MS.gene71432.t1 AT1G77950 46.479 71 37 1 9 78 2 72 2.81e-14 70.5
MS.gene71432.t1 AT1G77950 46.479 71 37 1 9 78 2 72 2.81e-14 70.5
MS.gene71432.t1 AT1G77950 46.479 71 37 1 9 78 2 72 2.81e-14 70.5
MS.gene71432.t1 AT1G77950 46.479 71 37 1 9 78 2 72 2.81e-14 70.5
MS.gene71432.t1 AT1G69120 31.973 147 84 3 9 155 2 132 2.86e-14 70.5
MS.gene71432.t1 AT4G11880 57.143 56 24 0 10 65 3 58 3.09e-14 69.7
MS.gene71432.t1 AT4G11880 57.143 56 24 0 10 65 3 58 3.09e-14 69.7
MS.gene71432.t1 AT3G61120 31.469 143 71 3 9 124 2 144 4.02e-14 70.1
MS.gene71432.t1 AT1G47760 37.864 103 50 2 9 111 2 90 4.10e-14 68.9
MS.gene71432.t1 AT2G03710 55.357 56 25 0 9 64 2 57 4.90e-14 68.6
MS.gene71432.t1 AT5G15800 46.377 69 36 1 9 76 2 70 5.47e-14 69.7
MS.gene71432.t1 AT1G26310 52.632 57 27 0 9 65 2 58 6.60e-14 69.3
MS.gene71432.t1 AT2G14210 44.928 69 37 1 9 76 2 70 8.17e-14 68.9
MS.gene71432.t1 AT5G65070 31.206 141 69 4 9 124 2 139 8.41e-14 68.2
MS.gene71432.t1 AT5G15800 46.377 69 36 1 9 76 2 70 8.81e-14 69.3
MS.gene71432.t1 AT2G14210 44.928 69 37 1 9 76 2 70 1.01e-13 68.6
MS.gene71432.t1 AT2G03710 55.357 56 25 0 9 64 2 57 1.24e-13 68.6
MS.gene71432.t1 AT2G03710 55.357 56 25 0 9 64 2 57 1.33e-13 68.6
MS.gene71432.t1 AT1G24260 53.571 56 26 0 9 64 2 57 1.39e-13 68.2
MS.gene71432.t1 AT1G24260 53.571 56 26 0 9 64 2 57 1.57e-13 68.2
MS.gene71432.t1 AT1G24260 53.571 56 26 0 9 64 2 57 1.60e-13 68.2
MS.gene71432.t1 AT3G02310 53.571 56 26 0 9 64 2 57 1.99e-13 68.2
MS.gene71432.t1 AT5G65060 44.928 69 37 1 9 76 2 70 2.04e-13 67.0
MS.gene71432.t1 AT3G58780 46.875 64 34 0 2 65 10 73 2.05e-13 68.2
MS.gene71432.t1 AT3G02310 53.571 56 26 0 9 64 2 57 2.20e-13 67.0
MS.gene71432.t1 AT5G65060 44.928 69 37 1 9 76 2 70 2.30e-13 67.0
MS.gene71432.t1 AT5G65060 44.928 69 37 1 9 76 2 70 2.75e-13 66.6
MS.gene71432.t1 AT5G65070 42.029 69 39 1 9 76 2 70 4.30e-13 67.0
MS.gene71432.t1 AT5G65070 46.667 60 32 0 9 68 2 61 4.91e-13 66.2
MS.gene71432.t1 AT5G65070 46.667 60 32 0 9 68 2 61 5.75e-13 66.6
MS.gene71432.t1 AT5G65080 28.966 145 82 2 1 124 1 145 7.33e-13 65.9
MS.gene71432.t1 AT5G27130 48.148 81 37 3 5 81 10 89 1.07e-12 66.6
MS.gene71432.t1 AT1G71692 44.286 70 38 1 9 77 2 71 2.05e-12 64.7
MS.gene71432.t1 AT5G65080 28.767 146 82 4 1 124 1 146 3.04e-12 63.9
MS.gene71432.t1 AT5G49490 29.461 241 105 11 5 215 41 246 9.57e-12 63.5
MS.gene71432.t1 AT1G46408 36.000 125 71 5 7 122 2 126 2.80e-11 62.4
MS.gene71432.t1 AT4G37435 48.214 56 29 0 9 64 2 57 6.10e-11 60.1

Find 54 sgRNAs with CRISPR-Local

Find 66 sgRNAs with CRISPR-GE


CRISPR-Local

CRISPR-Local
sgRNA_sequence on_target_score Position Region
AGCATTAAGCTCGCGCAATT+TGG 0.231826 1.3:-54063981 None:intergenic
ATTGAAGCTTCTTGATGATT+TGG 0.278070 1.3:-54064280 None:intergenic
ATTGCAAGATCCCATTGTTT+TGG 0.301551 1.3:-54063937 None:intergenic
TTGTTTGGTTTCAACAATAT+AGG 0.376703 1.3:+54064346 MS.gene71432:CDS
AGCGAGCTTTGCACCCTTTG+TGG 0.378424 1.3:+54063809 MS.gene71432:CDS
ATGTTGCAACCTCATTTGTT+TGG 0.384083 1.3:+54064331 MS.gene71432:CDS
GACCTTATCCATCCCTTCAA+TGG 0.393032 1.3:-54064107 None:intergenic
TGTTGGTATGGTTGTAAGTC+AGG 0.400193 1.3:+54064186 MS.gene71432:CDS
GTGGGACCTGAGAGAGATAA+TGG 0.405328 1.3:-54063913 None:intergenic
TGGCTACCCAGATGTTTATA+CGG 0.408391 1.3:+54063883 MS.gene71432:CDS
TGGTGGGCTTGTCCCATTGA+AGG 0.408921 1.3:+54064094 MS.gene71432:CDS
TCTATGACCGTATAAACATC+TGG 0.410748 1.3:-54063890 None:intergenic
AGAAGAATGAGGCTCAGTTT+TGG 0.412014 1.3:+54064074 MS.gene71432:CDS
GATGGTGGACATGGTCCCTC+TGG 0.456482 1.3:+54064373 MS.gene71432:CDS
AAGCTTCTTGATGATTTGGC+TGG 0.457989 1.3:-54064276 None:intergenic
ACCTTATCCATCCCTTCAAT+GGG 0.468641 1.3:-54064106 None:intergenic
CATAGACCATTATCTCTCTC+AGG 0.493066 1.3:+54063907 MS.gene71432:CDS
AACAAATGAGGTTGCAACAT+AGG 0.496587 1.3:-54064328 None:intergenic
TGTATTCTCACCTAGTGATA+AGG 0.498147 1.3:+54063850 MS.gene71432:CDS
TCCCATTGAAGGGATGGATA+AGG 0.507796 1.3:+54064105 MS.gene71432:CDS
AGCAATATATGCACCACAAA+GGG 0.513172 1.3:-54063822 None:intergenic
AGGTCCCACTCCAAAACAAT+GGG 0.517473 1.3:+54063927 MS.gene71432:CDS
ACAAATGAGGTTGCAACATA+GGG 0.527904 1.3:-54064327 None:intergenic
GGCTTGTCCCATTGAAGGGA+TGG 0.531760 1.3:+54064099 MS.gene71432:CDS
TTTGGTTTCAACAATATAGG+AGG 0.541850 1.3:+54064349 MS.gene71432:CDS
GGTGGGCTTGTCCCATTGAA+GGG 0.542115 1.3:+54064095 MS.gene71432:CDS
TTCAACAATATAGGAGGAGA+TGG 0.553417 1.3:+54064355 MS.gene71432:CDS
TTGTTGAAACCAAACAAATG+AGG 0.558095 1.3:-54064340 None:intergenic
CAGGTCCCACTCCAAAACAA+TGG 0.563813 1.3:+54063926 MS.gene71432:CDS
TGATTTGGCTGGTGCTCGAT+AGG 0.567200 1.3:-54064265 None:intergenic
ACTTTCTCGAAGCGTCGTAG+TGG 0.570157 1.3:+54063770 MS.gene71432:CDS
ATCATGTCGAGTGGAAAGAA+AGG 0.570415 1.3:+54063689 None:intergenic
TGGGATCTTGCAATTCATTG+AGG 0.581064 1.3:+54063946 MS.gene71432:CDS
ACTCAAATCAACGATGCACT+AGG 0.586796 1.3:+54064010 MS.gene71432:CDS
CGATTTATGCAAGAAGAATG+AGG 0.588461 1.3:+54064063 MS.gene71432:CDS
ATAGGGTTCTGACAAAATCC+AGG 0.592191 1.3:-54064310 None:intergenic
GTGCTCGATAGGCATGGTAG+AGG 0.592462 1.3:-54064254 None:intergenic
CTATGACCGTATAAACATCT+GGG 0.594194 1.3:-54063889 None:intergenic
TGTGCTTCAATCATGTCGAG+TGG 0.596376 1.3:+54063680 None:intergenic
AAACGAATTGCAGAACATGT+TGG 0.599135 1.3:+54064169 MS.gene71432:CDS
AATTGCAGAACATGTTGGTA+TGG 0.601458 1.3:+54064174 MS.gene71432:CDS
GTTGGTATGGTTGTAAGTCA+GGG 0.608714 1.3:+54064187 MS.gene71432:CDS
GCTCGCGCAATTTGGCGCTG+CGG 0.612951 1.3:-54063973 None:intergenic
ATAGGAGGAGATGGTGGACA+TGG 0.613263 1.3:+54064364 MS.gene71432:CDS
GGTTCTGACAAAATCCAGGC+GGG 0.613799 1.3:-54064306 None:intergenic
AACAATATAGGAGGAGATGG+TGG 0.621356 1.3:+54064358 MS.gene71432:CDS
AATGAAAACACCTTATCACT+AGG 0.625532 1.3:-54063860 None:intergenic
TGGCTGGTGCTCGATAGGCA+TGG 0.627452 1.3:-54064260 None:intergenic
TCGAGTGGAAAGAAAGGTCA+AGG 0.628900 1.3:+54063695 MS.gene71432:CDS
GAGCAATATATGCACCACAA+AGG 0.643897 1.3:-54063823 None:intergenic
TTGGTATGGTTGTAAGTCAG+GGG 0.657692 1.3:+54064188 MS.gene71432:CDS
TTGGATCAATAGAATCCAGA+GGG 0.672575 1.3:-54064388 None:intergenic
CTTGGATCAATAGAATCCAG+AGG 0.702259 1.3:-54064389 None:intergenic
GGGTTCTGACAAAATCCAGG+CGG 0.715161 1.3:-54064307 None:intergenic

CRISPR-GE

badsite warning sgRNA_sequence Strand Position Region GC_content
!! ATTATTGAAAAATGCTTTGT+TGG + chr1.3:54064138-54064157 MS.gene71432:CDS 20.0%
!!! CATTTTTCAATAATTGAAGT+TGG - chr1.3:54064132-54064151 None:intergenic 20.0%
!! TTGTTTGGTTTCAACAATAT+AGG + chr1.3:54064346-54064365 MS.gene71432:CDS 25.0%
AATGAAAACACCTTATCACT+AGG - chr1.3:54063863-54063882 None:intergenic 30.0%
TTGTTGAAACCAAACAAATG+AGG - chr1.3:54064343-54064362 None:intergenic 30.0%
! ATTGAAGCTTCTTGATGATT+TGG - chr1.3:54064283-54064302 None:intergenic 30.0%
! TTTGGTTTCAACAATATAGG+AGG + chr1.3:54064349-54064368 MS.gene71432:CDS 30.0%
!! AGTGATAAGGTGTTTTCATT+TGG + chr1.3:54063863-54063882 MS.gene71432:CDS 30.0%
AAACGAATTGCAGAACATGT+TGG + chr1.3:54064169-54064188 MS.gene71432:CDS 35.0%
AACAAAAAACGGAAGGGTTT+GGG - chr1.3:54064221-54064240 None:intergenic 35.0%
AACAAATGAGGTTGCAACAT+AGG - chr1.3:54064331-54064350 None:intergenic 35.0%
AATTGCAGAACATGTTGGTA+TGG + chr1.3:54064174-54064193 MS.gene71432:CDS 35.0%
ACAAATGAGGTTGCAACATA+GGG - chr1.3:54064330-54064349 None:intergenic 35.0%
AGCAATATATGCACCACAAA+GGG - chr1.3:54063825-54063844 None:intergenic 35.0%
ATGTTGCAACCTCATTTGTT+TGG + chr1.3:54064331-54064350 MS.gene71432:CDS 35.0%
ATTGCCAACAAAAAACGGAA+GGG - chr1.3:54064227-54064246 None:intergenic 35.0%
CGATTTATGCAAGAAGAATG+AGG + chr1.3:54064063-54064082 MS.gene71432:CDS 35.0%
CTATGACCGTATAAACATCT+GGG - chr1.3:54063892-54063911 None:intergenic 35.0%
GAACCATTGCCAACAAAAAA+CGG - chr1.3:54064232-54064251 None:intergenic 35.0%
TCTATGACCGTATAAACATC+TGG - chr1.3:54063893-54063912 None:intergenic 35.0%
TGTATTCTCACCTAGTGATA+AGG + chr1.3:54063850-54063869 MS.gene71432:CDS 35.0%
TTCAACAATATAGGAGGAGA+TGG + chr1.3:54064355-54064374 MS.gene71432:CDS 35.0%
! ATTGCAAGATCCCATTGTTT+TGG - chr1.3:54063940-54063959 None:intergenic 35.0%
AACAATATAGGAGGAGATGG+TGG + chr1.3:54064358-54064377 MS.gene71432:CDS 40.0%
ACCTTATCCATCCCTTCAAT+GGG - chr1.3:54064109-54064128 None:intergenic 40.0%
ACTCAAATCAACGATGCACT+AGG + chr1.3:54064010-54064029 MS.gene71432:CDS 40.0%
CAACAAAAAACGGAAGGGTT+TGG - chr1.3:54064222-54064241 None:intergenic 40.0%
CATAGACCATTATCTCTCTC+AGG + chr1.3:54063907-54063926 MS.gene71432:CDS 40.0%
CATTGCCAACAAAAAACGGA+AGG - chr1.3:54064228-54064247 None:intergenic 40.0%
GAGCAATATATGCACCACAA+AGG - chr1.3:54063826-54063845 None:intergenic 40.0%
GTTGGTATGGTTGTAAGTCA+GGG + chr1.3:54064187-54064206 MS.gene71432:CDS 40.0%
TGGCTACCCAGATGTTTATA+CGG + chr1.3:54063883-54063902 MS.gene71432:CDS 40.0%
TGGGATCTTGCAATTCATTG+AGG + chr1.3:54063946-54063965 MS.gene71432:CDS 40.0%
TGTTGGTATGGTTGTAAGTC+AGG + chr1.3:54064186-54064205 MS.gene71432:CDS 40.0%
TTGGTATGGTTGTAAGTCAG+GGG + chr1.3:54064188-54064207 MS.gene71432:CDS 40.0%
! AAGCTTCTTGATGATTTGGC+TGG - chr1.3:54064279-54064298 None:intergenic 40.0%
! AGAAGAATGAGGCTCAGTTT+TGG + chr1.3:54064074-54064093 MS.gene71432:CDS 40.0%
! ATAGGGTTCTGACAAAATCC+AGG - chr1.3:54064313-54064332 None:intergenic 40.0%
!!! AAGATCCCATTGTTTTGGAG+TGG - chr1.3:54063935-54063954 None:intergenic 40.0%
!!! AGATCCCATTGTTTTGGAGT+GGG - chr1.3:54063934-54063953 None:intergenic 40.0%
!!! CAAACCCTTCCGTTTTTTGT+TGG + chr1.3:54064220-54064239 MS.gene71432:CDS 40.0%
!!! CTTCCGTTTTTTGTTGGCAA+TGG + chr1.3:54064226-54064245 MS.gene71432:CDS 40.0%
AAAAACGGAAGGGTTTGGGT+AGG - chr1.3:54064217-54064236 None:intergenic 45.0%
AGCATTAAGCTCGCGCAATT+TGG - chr1.3:54063984-54064003 None:intergenic 45.0%
AGGTCCCACTCCAAAACAAT+GGG + chr1.3:54063927-54063946 MS.gene71432:CDS 45.0%
GACCTTATCCATCCCTTCAA+TGG - chr1.3:54064110-54064129 None:intergenic 45.0%
TCCCATTGAAGGGATGGATA+AGG + chr1.3:54064105-54064124 MS.gene71432:CDS 45.0%
TCGAGTGGAAAGAAAGGTCA+AGG + chr1.3:54063695-54063714 MS.gene71432:CDS 45.0%
!! AGAATGAGGCTCAGTTTTGG+TGG + chr1.3:54064077-54064096 MS.gene71432:CDS 45.0%
!! GAATGAGGCTCAGTTTTGGT+GGG + chr1.3:54064078-54064097 MS.gene71432:CDS 45.0%
CAGGTCCCACTCCAAAACAA+TGG + chr1.3:54063926-54063945 MS.gene71432:CDS 50.0%
GTGGGACCTGAGAGAGATAA+TGG - chr1.3:54063916-54063935 None:intergenic 50.0%
! GAAGCTTCAATTTTCCCGCC+TGG + chr1.3:54064292-54064311 MS.gene71432:CDS 50.0%
! GGGTTCTGACAAAATCCAGG+CGG - chr1.3:54064310-54064329 None:intergenic 50.0%
! GGTTCTGACAAAATCCAGGC+GGG - chr1.3:54064309-54064328 None:intergenic 50.0%
! TGATTTGGCTGGTGCTCGAT+AGG - chr1.3:54064268-54064287 None:intergenic 50.0%
!! ACTTTCTCGAAGCGTCGTAG+TGG + chr1.3:54063770-54063789 MS.gene71432:CDS 50.0%
!! ATAGGAGGAGATGGTGGACA+TGG + chr1.3:54064364-54064383 MS.gene71432:CDS 50.0%
AGCGAGCTTTGCACCCTTTG+TGG + chr1.3:54063809-54063828 MS.gene71432:CDS 55.0%
GGCTTGTCCCATTGAAGGGA+TGG + chr1.3:54064099-54064118 MS.gene71432:CDS 55.0%
GTGCTCGATAGGCATGGTAG+AGG - chr1.3:54064257-54064276 None:intergenic 55.0%
! GGTGGGCTTGTCCCATTGAA+GGG + chr1.3:54064095-54064114 MS.gene71432:CDS 55.0%
!! TGGTGGGCTTGTCCCATTGA+AGG + chr1.3:54064094-54064113 MS.gene71432:CDS 55.0%
TGGCTGGTGCTCGATAGGCA+TGG - chr1.3:54064263-54064282 None:intergenic 60.0%
!! GATGGTGGACATGGTCCCTC+TGG + chr1.3:54064373-54064392 MS.gene71432:CDS 60.0%
GCTCGCGCAATTTGGCGCTG+CGG - chr1.3:54063976-54063995 None:intergenic 65.0%


Chromosome Type Strat End Strand Name
chr1.3 gene 54063692 54064405 54063692 ID=MS.gene71432
chr1.3 mRNA 54063692 54064405 54063692 ID=MS.gene71432.t1;Parent=MS.gene71432
chr1.3 exon 54063692 54064405 54063692 ID=MS.gene71432.t1.exon1;Parent=MS.gene71432.t1
chr1.3 CDS 54063692 54064405 54063692 ID=cds.MS.gene71432.t1;Parent=MS.gene71432.t1
Gene Sequence

>MS.gene71432

ATGTCGAGTGGAAAGAAAGGTCAAGGTCGCAAAAAAATTGAGATGAAAAAAATGAGCAACGAGAGCAATTTGCAAGTGACTTTCTCGAAGCGTCGTAGTGGACTCTTCAAGAAAGCGAGCGAGCTTTGCACCCTTTGTGGTGCATATATTGCTCTCATTGTATTCTCACCTAGTGATAAGGTGTTTTCATTTGGCTACCCAGATGTTTATACGGTCATAGACCATTATCTCTCTCAGGTCCCACTCCAAAACAATGGGATCTTGCAATTCATTGAGGCTCACCGCAGCGCCAAATTGCGCGAGCTTAATGCTATGTTAACTCAAATCAACGATGCACTAGGCATCGAAAAGAAGCGCAAGAATGAGCTGATCGATTTATGCAAGAAGAATGAGGCTCAGTTTTGGTGGGCTTGTCCCATTGAAGGGATGGATAAGGTCCAACTTCAATTATTGAAAAATGCTTTGTTGGATCTTAAGAAACGAATTGCAGAACATGTTGGTATGGTTGTAAGTCAGGGGACTCCTACCCAAACCCTTCCGTTTTTTGTTGGCAATGGTTCGTCCTCTACCATGCCTATCGAGCACCAGCCAAATCATCAAGAAGCTTCAATTTTCCCGCCTGGATTTTGTCAGAACCCTATGTTGCAACCTCATTTGTTTGGTTTCAACAATATAGGAGGAGATGGTGGACATGGTCCCTCTGGATTCTATTGA
Protein sequence

>MS.gene71432.t1

MSSGKKGQGRKKIEMKKMSNESNLQVTFSKRRSGLFKKASELCTLCGAYIALIVFSPSDKVFSFGYPDVYTVIDHYLSQVPLQNNGILQFIEAHRSAKLRELNAMLTQINDALGIEKKRKNELIDLCKKNEAQFWWACPIEGMDKVQLQLLKNALLDLKKRIAEHVGMVVSQGTPTQTLPFFVGNGSSSTMPIEHQPNHQEASIFPPGFCQNPMLQPHLFGFNNIGGDGGHGPSGFY