Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71451.t1 | XP_003590787.1 | 92.7 | 524 | 33 | 3 | 1 | 524 | 1 | 519 | 5.70E-269 | 936.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71451.t1 | G7I3Y4 | 92.7 | 524 | 33 | 3 | 1 | 524 | 1 | 519 | 4.1e-269 | 936.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene057887 | MS.gene71451 | 0.808237 | 3.42E-50 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71451.t1 | MTR_1g075260 | 92.748 | 524 | 33 | 3 | 1 | 524 | 1 | 519 | 0.0 | 970 |
| MS.gene71451.t1 | MTR_1g075260 | 93.159 | 497 | 32 | 2 | 28 | 524 | 1 | 495 | 0.0 | 929 |
| MS.gene71451.t1 | MTR_1g075200 | 69.608 | 510 | 136 | 5 | 31 | 523 | 12 | 519 | 0.0 | 711 |
| MS.gene71451.t1 | MTR_1g475250 | 69.608 | 510 | 136 | 5 | 31 | 523 | 12 | 519 | 0.0 | 711 |
| MS.gene71451.t1 | MTR_1g075250 | 67.961 | 515 | 137 | 5 | 22 | 523 | 5 | 504 | 0.0 | 694 |
| MS.gene71451.t1 | MTR_1g070385 | 59.667 | 481 | 177 | 5 | 48 | 519 | 329 | 801 | 0.0 | 584 |
| MS.gene71451.t1 | MTR_7g096300 | 60.636 | 503 | 178 | 7 | 23 | 519 | 261 | 749 | 0.0 | 568 |
| MS.gene71451.t1 | MTR_1g475250 | 70.942 | 382 | 92 | 5 | 31 | 395 | 12 | 391 | 0.0 | 546 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71451.t1 | AT1G06750 | 59.010 | 505 | 190 | 7 | 27 | 524 | 25 | 519 | 0.0 | 561 |
| MS.gene71451.t1 | AT1G06750 | 59.010 | 505 | 190 | 7 | 27 | 524 | 18 | 512 | 0.0 | 561 |
| MS.gene71451.t1 | AT1G06750 | 59.010 | 505 | 190 | 7 | 27 | 524 | 18 | 512 | 0.0 | 561 |
| MS.gene71451.t1 | AT2G30630 | 60.377 | 477 | 176 | 6 | 47 | 519 | 54 | 521 | 0.0 | 549 |
| MS.gene71451.t1 | AT1G04280 | 60.788 | 482 | 178 | 4 | 46 | 523 | 59 | 533 | 0.0 | 546 |
| MS.gene71451.t1 | AT1G04280 | 60.788 | 482 | 178 | 4 | 46 | 523 | 5 | 479 | 0.0 | 545 |
| MS.gene71451.t1 | AT2G30630 | 58.032 | 498 | 175 | 7 | 47 | 519 | 54 | 542 | 0.0 | 538 |
| MS.gene71451.t1 | AT2G30630 | 60.907 | 353 | 125 | 5 | 47 | 395 | 54 | 397 | 2.30e-139 | 408 |
Find 113 sgRNAs with CRISPR-Local
Find 315 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TCAACAAGTTTGCAATATTT+TGG | 0.119289 | 1.3:+53869563 | None:intergenic |
| CGTTGAAGCTGATGCGTTTA+AGG | 0.191956 | 1.3:-53870249 | MS.gene71451:CDS |
| AGAAGAGATTAAAGCAATAA+AGG | 0.228358 | 1.3:-53870923 | MS.gene71451:CDS |
| GGACAATAACTGAAAATTAT+TGG | 0.237529 | 1.3:-53869889 | MS.gene71451:CDS |
| AATCAAAGGAAAATTATAAA+AGG | 0.238536 | 1.3:-53869835 | MS.gene71451:CDS |
| AGTGAGAGAATATCTCAATT+TGG | 0.244042 | 1.3:+53873424 | None:intergenic |
| TCCAAGCATTTGAGAACTTC+AGG | 0.301231 | 1.3:+53869350 | None:intergenic |
| TTCATTATAAAGTTCGTAGA+TGG | 0.319575 | 1.3:+53869295 | None:intergenic |
| GAGTCCAGTGTTGCTGCTTA+TGG | 0.322600 | 1.3:-53870848 | MS.gene71451:CDS |
| GGCTATCTTGCTGTTGTTAG+AGG | 0.330163 | 1.3:-53869758 | MS.gene71451:CDS |
| ACATTGTTCTTTCTCCTTCA+AGG | 0.341632 | 1.3:-53869235 | MS.gene71451:CDS |
| CATGCTCGAAACTGCTGAAT+TGG | 0.348113 | 1.3:-53870177 | MS.gene71451:intron |
| GAAGAGATTAAAGCAATAAA+GGG | 0.359600 | 1.3:-53870922 | MS.gene71451:CDS |
| CTATGGGACCTGGCACTGTT+TGG | 0.363637 | 1.3:-53869262 | MS.gene71451:CDS |
| GTGAGAGAATATCTCAATTT+GGG | 0.376022 | 1.3:+53873425 | None:intergenic |
| CTTTGATTCGTGCTCTTCTT+CGG | 0.378530 | 1.3:+53869850 | None:intergenic |
| GACAATAACTGAAAATTATT+GGG | 0.379749 | 1.3:-53869888 | MS.gene71451:CDS |
| AGTCCAGTGTTGCTGCTTAT+GGG | 0.381651 | 1.3:-53870847 | MS.gene71451:CDS |
| CTGCTTATGGGTGGAGGCAT+GGG | 0.397062 | 1.3:-53870835 | MS.gene71451:CDS |
| CAAGAAATATTCACAAATAT+AGG | 0.408621 | 1.3:-53869949 | MS.gene71451:CDS |
| ATGGGTGGAGGCATGGGATC+TGG | 0.410048 | 1.3:-53870829 | MS.gene71451:CDS |
| CTCAATTTGGGCAACACGGC+CGG | 0.414553 | 1.3:+53873437 | None:intergenic |
| TTGCTGTTGTTAGAGGCATT+AGG | 0.419183 | 1.3:-53869751 | MS.gene71451:intron |
| CAAGTGATGTGGAAAACTTA+AGG | 0.419408 | 1.3:-53869211 | MS.gene71451:CDS |
| CACAAATATAGGTATCGAAT+GGG | 0.422050 | 1.3:-53869938 | MS.gene71451:CDS |
| TCCACATCACTTGACCTTGA+AGG | 0.425410 | 1.3:+53869221 | None:intergenic |
| CTAGTGACAGCTCTAAATAA+AGG | 0.434780 | 1.3:-53870037 | MS.gene71451:CDS |
| ACCTGAAGTTCTCAAATGCT+TGG | 0.434910 | 1.3:-53869351 | MS.gene71451:CDS |
| AAACTGTTTGCTACCTTTGG+TGG | 0.436970 | 1.3:+53869503 | None:intergenic |
| CACTTACATCAAACCGCATC+CGG | 0.437528 | 1.3:-53873456 | MS.gene71451:CDS |
| GCTGCTTATGGGTGGAGGCA+TGG | 0.440698 | 1.3:-53870836 | MS.gene71451:CDS |
| ATGTAAGTGGGGAATGATCT+TGG | 0.443811 | 1.3:+53873470 | None:intergenic |
| GAGATATTCTCTCACTATGT+TGG | 0.445631 | 1.3:-53873417 | MS.gene71451:intron |
| TATATAAAGCTCTTAACTCT+AGG | 0.453317 | 1.3:-53870214 | MS.gene71451:CDS |
| TAATGAAACCAACACTGCTA+TGG | 0.454761 | 1.3:-53869279 | MS.gene71451:CDS |
| TACAAAAGGTTCCCATGATA+AGG | 0.460056 | 1.3:+53869991 | None:intergenic |
| AAGTGATGTGGAAAACTTAA+GGG | 0.467576 | 1.3:-53869210 | MS.gene71451:CDS |
| CGGATGCGGTTTGATGTAAG+TGG | 0.474218 | 1.3:+53873457 | None:intergenic |
| ATGTCATTCCAAACAGTGCC+AGG | 0.488602 | 1.3:+53869254 | None:intergenic |
| ATATAAAGCTCTTAACTCTA+GGG | 0.489636 | 1.3:-53870213 | MS.gene71451:CDS |
| TCATGGATGGTACCTTATCA+TGG | 0.490150 | 1.3:-53870003 | MS.gene71451:CDS |
| TTTGTGAATATTTCTTGCCA+TGG | 0.491743 | 1.3:+53869955 | None:intergenic |
| AGCCTCCATCGTCGAATCAA+TGG | 0.497510 | 1.3:-53873502 | MS.gene71451:CDS |
| GACTAATGATATATGAAGCT+TGG | 0.499250 | 1.3:+53871910 | None:intergenic |
| GCCAGGTCCCATAGCAGTGT+TGG | 0.499542 | 1.3:+53869271 | None:intergenic |
| ATCAAAGGAAAATTATAAAA+GGG | 0.500396 | 1.3:-53869834 | MS.gene71451:CDS |
| AGCTTCATATATCATTAGTC+AGG | 0.502600 | 1.3:-53871907 | MS.gene71451:intron |
| TTGGGCAACACGGCCGGATG+CGG | 0.503203 | 1.3:+53873443 | None:intergenic |
| CTAGTTGGTGTGGTTTGTGA+TGG | 0.503630 | 1.3:-53869779 | MS.gene71451:CDS |
| AATGAAACCAACACTGCTAT+GGG | 0.504209 | 1.3:-53869278 | MS.gene71451:CDS |
| GGATATAGAGAAGCTAAAGA+TGG | 0.509091 | 1.3:-53869911 | MS.gene71451:CDS |
| CAGAGATGATGCAGCATCAG+TGG | 0.510272 | 1.3:+53870060 | None:intergenic |
| GGTTCCAGAGTTATGCAGAT+TGG | 0.511336 | 1.3:-53872078 | MS.gene71451:CDS |
| GCAAACTTGTTGACAGTGCA+AGG | 0.512689 | 1.3:-53869553 | MS.gene71451:CDS |
| AGAGTTATGCAGATTGGCAC+AGG | 0.514548 | 1.3:-53872072 | MS.gene71451:CDS |
| ATACAGCTACAAGGTACTAC+TGG | 0.516118 | 1.3:-53873567 | MS.gene71451:CDS |
| TCACAAATATAGGTATCGAA+TGG | 0.521297 | 1.3:-53869939 | MS.gene71451:CDS |
| CCCTACAGAATTGTGCTAGT+TGG | 0.524552 | 1.3:-53869794 | MS.gene71451:CDS |
| CAGAATTGTGCTAGTTGGTG+TGG | 0.525790 | 1.3:-53869789 | MS.gene71451:CDS |
| CGAAGAAGAGCACGAATCAA+AGG | 0.525845 | 1.3:-53869849 | MS.gene71451:CDS |
| ACATACTGCAGTTAATAGAA+TGG | 0.530487 | 1.3:-53869403 | MS.gene71451:intron |
| GAGAGTAGCAAAGAATCTAA+AGG | 0.532305 | 1.3:-53870971 | MS.gene71451:CDS |
| TCCTTCAAGGTCAAGTGATG+TGG | 0.533467 | 1.3:-53869222 | MS.gene71451:CDS |
| AGTGAGGGTGAAATCACAAC+TGG | 0.534858 | 1.3:-53869615 | MS.gene71451:CDS |
| CCACCCATAAGCAGCAACAC+TGG | 0.545632 | 1.3:+53870844 | None:intergenic |
| ACCAACACTGCTATGGGACC+TGG | 0.548467 | 1.3:-53869272 | MS.gene71451:CDS |
| GCTATCGTCTGCTCTACAAA+AGG | 0.550676 | 1.3:+53869977 | None:intergenic |
| GGAGAGCTATCATGACAAGA+AGG | 0.552661 | 1.3:-53869640 | MS.gene71451:CDS |
| GTCTGAAGCTTCAAATGCTG+TGG | 0.553322 | 1.3:-53870273 | MS.gene71451:CDS |
| TAAAGGACGAGATGTGATCA+TGG | 0.557425 | 1.3:-53870020 | MS.gene71451:CDS |
| CATGACAAGAAGGGCAGTGA+GGG | 0.561480 | 1.3:-53869630 | MS.gene71451:CDS |
| TGTGCCAATCTGCATAACTC+TGG | 0.561897 | 1.3:+53872074 | None:intergenic |
| AGGATTTGTTGATGCTAGTG+AGG | 0.566512 | 1.3:-53872099 | MS.gene71451:CDS |
| CTCTCAAAGTTGTGACGTCA+AGG | 0.573033 | 1.3:-53870896 | MS.gene71451:CDS |
| TTATTGGGAGCAAGTTAATG+AGG | 0.573693 | 1.3:-53869873 | MS.gene71451:CDS |
| TTCGTAGATGGAATCTGCCT+CGG | 0.573861 | 1.3:+53869307 | None:intergenic |
| CAAGGTACTACTGGTAGTGT+TGG | 0.576348 | 1.3:-53873558 | MS.gene71451:CDS |
| GATATAGAGAAGCTAAAGAT+GGG | 0.576466 | 1.3:-53869910 | MS.gene71451:CDS |
| CATGGATGGTACCTTATCAT+GGG | 0.578376 | 1.3:-53870002 | MS.gene71451:CDS |
| ATCTATCAATATCTAGCCAA+CGG | 0.583112 | 1.3:-53872014 | MS.gene71451:CDS |
| GTGTTGCTGCTTATGGGTGG+AGG | 0.584402 | 1.3:-53870841 | MS.gene71451:CDS |
| CCAACTAGCACAATTCTGTA+GGG | 0.585039 | 1.3:+53869794 | None:intergenic |
| CAGTTTCGAGCATGTCGTCA+TGG | 0.587215 | 1.3:+53870186 | None:intergenic |
| TTGCTACCTTTGGTGGACCA+CGG | 0.587632 | 1.3:+53869510 | None:intergenic |
| CCGCCGTTGTCCACAGTGAG+AGG | 0.590571 | 1.3:-53870870 | MS.gene71451:CDS |
| TGAATTAGGGTCCTCTCCGT+TGG | 0.591979 | 1.3:+53871998 | None:intergenic |
| ACCAACTAGCACAATTCTGT+AGG | 0.594431 | 1.3:+53869793 | None:intergenic |
| GAGAGCTATCATGACAAGAA+GGG | 0.596487 | 1.3:-53869639 | MS.gene71451:CDS |
| ACAAATATAGGTATCGAATG+GGG | 0.597771 | 1.3:-53869937 | MS.gene71451:CDS |
| GGACGAGATGTGATCATGGA+TGG | 0.604719 | 1.3:-53870016 | MS.gene71451:CDS |
| CCAGTGTTGCTGCTTATGGG+TGG | 0.605731 | 1.3:-53870844 | MS.gene71451:CDS |
| CACCATTGATTCGACGATGG+AGG | 0.606869 | 1.3:+53873500 | None:intergenic |
| TCAAACAACATACAGCTACA+AGG | 0.610579 | 1.3:-53873576 | MS.gene71451:CDS |
| GGATGCGGTTTGATGTAAGT+GGG | 0.610947 | 1.3:+53873458 | None:intergenic |
| TGATGTCCGTGGTCCACCAA+AGG | 0.616911 | 1.3:-53869516 | MS.gene71451:intron |
| TGTAGAGCAGACGATAGCCA+TGG | 0.622550 | 1.3:-53869972 | MS.gene71451:CDS |
| TGATTCTCACAATCTACAAG+TGG | 0.622599 | 1.3:-53869375 | MS.gene71451:CDS |
| TATAAAGCTCTTAACTCTAG+GGG | 0.623229 | 1.3:-53870212 | MS.gene71451:CDS |
| ATATCTCAATTTGGGCAACA+CGG | 0.637776 | 1.3:+53873433 | None:intergenic |
| CAAATATAGGTATCGAATGG+GGG | 0.646022 | 1.3:-53869936 | MS.gene71451:CDS |
| CTCCATCGTCGAATCAATGG+TGG | 0.653590 | 1.3:-53873499 | MS.gene71451:CDS |
| GATAAGCAGTTTAAATACCG+AGG | 0.657474 | 1.3:-53869324 | MS.gene71451:CDS |
| ACACTGGACTCCTCTCACTG+TGG | 0.664444 | 1.3:+53870860 | None:intergenic |
| AATGAAAAGCGAAATAACTG+AGG | 0.665453 | 1.3:+53871937 | None:intergenic |
| GAGCAACCTCACACATGTTG+TGG | 0.674543 | 1.3:-53873526 | MS.gene71451:CDS |
| TCATGACAAGAAGGGCAGTG+AGG | 0.676129 | 1.3:-53869631 | MS.gene71451:CDS |
| GATGCGGTTTGATGTAAGTG+GGG | 0.687153 | 1.3:+53873459 | None:intergenic |
| CCTCTCACTGTGGACAACGG+CGG | 0.688206 | 1.3:+53870870 | None:intergenic |
| TACCACCATTGATTCGACGA+TGG | 0.696379 | 1.3:+53873497 | None:intergenic |
| ACTCCTCTCACTGTGGACAA+CGG | 0.700813 | 1.3:+53870867 | None:intergenic |
| TATTACACGACTGATGTCCG+TGG | 0.704279 | 1.3:-53869527 | MS.gene71451:CDS |
| TCAATATCTAGCCAACGGAG+AGG | 0.708193 | 1.3:-53872009 | MS.gene71451:CDS |
| AGGCTGCCACAACATGTGTG+AGG | 0.761589 | 1.3:+53873520 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | TTATAAAATGGATAAATATT+TGG | - | chr1.3:53872107-53872126 | MS.gene71451:CDS | 10.0% |
| !! | AAGAAAATGAGTTTATAAAA+TGG | - | chr1.3:53872095-53872114 | MS.gene71451:CDS | 15.0% |
| !! | AATCAAAGGAAAATTATAAA+AGG | - | chr1.3:53872943-53872962 | MS.gene71451:intron | 15.0% |
| !! | ATCAAAGGAAAATTATAAAA+GGG | - | chr1.3:53872944-53872963 | MS.gene71451:intron | 15.0% |
| !! | ATTATACAAAATAAAGGTTT+GGG | + | chr1.3:53870303-53870322 | None:intergenic | 15.0% |
| !! | TAGTTGATTATACAAAATAA+AGG | + | chr1.3:53870309-53870328 | None:intergenic | 15.0% |
| !!! | AAAATATAAATGGTTTTAAC+TGG | + | chr1.3:53871654-53871673 | None:intergenic | 15.0% |
| !!! | AATTACTCAATGTTTTTTAA+AGG | + | chr1.3:53871690-53871709 | None:intergenic | 15.0% |
| !!! | ATAAACTCATTTTCTTAATT+TGG | + | chr1.3:53872091-53872110 | None:intergenic | 15.0% |
| !!! | ATATTTTTGAGATGTATTTT+CGG | + | chr1.3:53871454-53871473 | None:intergenic | 15.0% |
| !!! | TATTTCTGTAAATTCATTAA+TGG | - | chr1.3:53872183-53872202 | MS.gene71451:intron | 15.0% |
| !! | AAAACCATCAAAAAACAATA+AGG | - | chr1.3:53873611-53873630 | MS.gene71451:CDS | 20.0% |
| !! | AAATATTCAAGATAGAATCA+TGG | + | chr1.3:53869685-53869704 | None:intergenic | 20.0% |
| !! | ACATAGAATTGAAAGTTTAA+AGG | + | chr1.3:53872164-53872183 | None:intergenic | 20.0% |
| !! | ATATCTTATACAATACACTA+AGG | - | chr1.3:53872352-53872371 | MS.gene71451:intron | 20.0% |
| !! | ATGTAAATATAACAAGAGTT+GGG | + | chr1.3:53869798-53869817 | None:intergenic | 20.0% |
| !! | CAAGAAATATTCACAAATAT+AGG | - | chr1.3:53872829-53872848 | MS.gene71451:intron | 20.0% |
| !! | CATAGAATTGAAAGTTTAAA+GGG | + | chr1.3:53872163-53872182 | None:intergenic | 20.0% |
| !! | GACAATAACTGAAAATTATT+GGG | - | chr1.3:53872890-53872909 | MS.gene71451:intron | 20.0% |
| !! | GATTATACAAAATAAAGGTT+TGG | + | chr1.3:53870304-53870323 | None:intergenic | 20.0% |
| !! | TATCCAATTTCAAATAACTT+TGG | - | chr1.3:53869942-53869961 | MS.gene71451:CDS | 20.0% |
| !! | TCACCAAAAAAAATTCTATA+TGG | - | chr1.3:53869772-53869791 | MS.gene71451:CDS | 20.0% |
| !! | TTAAGTTTCTAATAAGTACA+AGG | - | chr1.3:53871726-53871745 | MS.gene71451:intron | 20.0% |
| !! | TTAGCATTAATATTGCAAAA+TGG | - | chr1.3:53873337-53873356 | MS.gene71451:intron | 20.0% |
| !! | TTTCATCCTTGATTATTAAA+TGG | - | chr1.3:53872464-53872483 | MS.gene71451:intron | 20.0% |
| !!! | AATTTTGCATATAGTGAATT+AGG | + | chr1.3:53870797-53870816 | None:intergenic | 20.0% |
| !!! | ACATCTCAAAAATATTCTTT+TGG | - | chr1.3:53871459-53871478 | MS.gene71451:intron | 20.0% |
| !!! | ACTTATCATGTGTTAAATTT+TGG | - | chr1.3:53872415-53872434 | MS.gene71451:intron | 20.0% |
| !!! | ATATAGAATTTTTTTTGGTG+AGG | + | chr1.3:53869773-53869792 | None:intergenic | 20.0% |
| !!! | ATTTTGATGACAAACTAATT+AGG | + | chr1.3:53872677-53872696 | None:intergenic | 20.0% |
| !!! | ATTTTGCATATAGTGAATTA+GGG | + | chr1.3:53870796-53870815 | None:intergenic | 20.0% |
| !!! | TATCCAAAGTTATTTGAAAT+TGG | + | chr1.3:53869948-53869967 | None:intergenic | 20.0% |
| !!! | TGACATTTTTCATTGAAATT+TGG | - | chr1.3:53873112-53873131 | MS.gene71451:intron | 20.0% |
| !!! | TTCTTATTTATTTTGAAACC+TGG | - | chr1.3:53870255-53870274 | MS.gene71451:CDS | 20.0% |
| !!! | TTTTGATGACAAACTAATTA+GGG | + | chr1.3:53872676-53872695 | None:intergenic | 20.0% |
| ! | AACGAGAAAAGTAAATGAAT+TGG | + | chr1.3:53870922-53870941 | None:intergenic | 25.0% |
| ! | AACTATAAAAAGAGAAAGTG+AGG | + | chr1.3:53871163-53871182 | None:intergenic | 25.0% |
| ! | AGAAGAGATTAAAGCAATAA+AGG | - | chr1.3:53871855-53871874 | MS.gene71451:intron | 25.0% |
| ! | AGTCATATAAAAAAACTGCA+TGG | + | chr1.3:53871361-53871380 | None:intergenic | 25.0% |
| ! | ATATAAAGCTCTTAACTCTA+GGG | - | chr1.3:53872565-53872584 | MS.gene71451:intron | 25.0% |
| ! | ATTCACTTATCAACTTTATC+AGG | + | chr1.3:53871285-53871304 | None:intergenic | 25.0% |
| ! | CACATCATTATTCACTAATA+TGG | - | chr1.3:53871755-53871774 | MS.gene71451:intron | 25.0% |
| ! | CATATTAGTGAATAATGATG+TGG | + | chr1.3:53871757-53871776 | None:intergenic | 25.0% |
| ! | CATGTAAATATAACAAGAGT+TGG | + | chr1.3:53869799-53869818 | None:intergenic | 25.0% |
| ! | CCAAAACCATTTAATAATCA+AGG | + | chr1.3:53872473-53872492 | None:intergenic | 25.0% |
| ! | GAAACTTACATATAGACAAA+AGG | + | chr1.3:53869729-53869748 | None:intergenic | 25.0% |
| ! | GAAGAGATTAAAGCAATAAA+GGG | - | chr1.3:53871856-53871875 | MS.gene71451:intron | 25.0% |
| ! | GACAAGAAAGTAAAAACAAA+TGG | - | chr1.3:53870556-53870575 | MS.gene71451:intron | 25.0% |
| ! | GGACAATAACTGAAAATTAT+TGG | - | chr1.3:53872889-53872908 | MS.gene71451:intron | 25.0% |
| ! | TATATAAAGCTCTTAACTCT+AGG | - | chr1.3:53872564-53872583 | MS.gene71451:intron | 25.0% |
| ! | TCTATCATTGAATGAAACAT+TGG | - | chr1.3:53870506-53870525 | MS.gene71451:intron | 25.0% |
| ! | TTCACTTATCAACTTTATCA+GGG | + | chr1.3:53871284-53871303 | None:intergenic | 25.0% |
| ! | TTCATTATAAAGTTCGTAGA+TGG | + | chr1.3:53873486-53873505 | None:intergenic | 25.0% |
| ! | TTCGATATAAATTTACCTTG+TGG | + | chr1.3:53871488-53871507 | None:intergenic | 25.0% |
| ! | TTTAACACATGATAAGTAAG+AGG | + | chr1.3:53872412-53872431 | None:intergenic | 25.0% |
| ! | TTTGTCATCAAAATCTAAAC+AGG | - | chr1.3:53872683-53872702 | MS.gene71451:intron | 25.0% |
| !! | CAACTCTTGTTATATTTACA+TGG | - | chr1.3:53869797-53869816 | MS.gene71451:CDS | 25.0% |
| !! | CCTTGATTATTAAATGGTTT+TGG | - | chr1.3:53872470-53872489 | MS.gene71451:intron | 25.0% |
| !! | GGATAAATTTTGCTTTCTAA+GGG | + | chr1.3:53869927-53869946 | None:intergenic | 25.0% |
| !! | TCAACAAGTTTGCAATATTT+TGG | + | chr1.3:53873218-53873237 | None:intergenic | 25.0% |
| !! | TGAAATGAAAAAGACTAGTT+AGG | - | chr1.3:53870376-53870395 | MS.gene71451:intron | 25.0% |
| !! | TGGATAAATTTTGCTTTCTA+AGG | + | chr1.3:53869928-53869947 | None:intergenic | 25.0% |
| !! | TTAAACCACATGTCTTTTAT+TGG | - | chr1.3:53870469-53870488 | MS.gene71451:intron | 25.0% |
| !! | TTTAAAGTCTTGGATATGTT+TGG | + | chr1.3:53870454-53870473 | None:intergenic | 25.0% |
| !! | TTTTTCATTGAAATTTGGAC+AGG | - | chr1.3:53873117-53873136 | MS.gene71451:intron | 25.0% |
| !!! | AAATAAGAAAAAAGTGCTGT+TGG | + | chr1.3:53870244-53870263 | None:intergenic | 25.0% |
| !!! | GGTTTTTTCTATTTTCAGAA+TGG | + | chr1.3:53873597-53873616 | None:intergenic | 25.0% |
| !!! | TAAGTGCATGTTTTTATTGT+CGG | - | chr1.3:53869580-53869599 | MS.gene71451:CDS | 25.0% |
| !!! | TCGAAGCCAATTATTTTTAA+CGG | - | chr1.3:53871573-53871592 | MS.gene71451:intron | 25.0% |
| AAAACATGAAACAAGGGATT+GGG | + | chr1.3:53869869-53869888 | None:intergenic | 30.0% | |
| AAAACATGCACTTACTAAGT+TGG | + | chr1.3:53869574-53869593 | None:intergenic | 30.0% | |
| AAGGTTGAAAACATGAAACA+AGG | + | chr1.3:53869876-53869895 | None:intergenic | 30.0% | |
| AAGTGATGTGGAAAACTTAA+GGG | - | chr1.3:53873568-53873587 | MS.gene71451:CDS | 30.0% | |
| AATGAAAAGCGAAATAACTG+AGG | + | chr1.3:53870844-53870863 | None:intergenic | 30.0% | |
| ACAATGGTATTGTATTGAAG+TGG | + | chr1.3:53872029-53872048 | None:intergenic | 30.0% | |
| ACATACTGCAGTTAATAGAA+TGG | - | chr1.3:53873375-53873394 | MS.gene71451:intron | 30.0% | |
| AGCTTCATATATCATTAGTC+AGG | - | chr1.3:53870871-53870890 | MS.gene71451:CDS | 30.0% | |
| AGGTTGAAAACATGAAACAA+GGG | + | chr1.3:53869875-53869894 | None:intergenic | 30.0% | |
| AGTGAGAGAATATCTCAATT+TGG | + | chr1.3:53869357-53869376 | None:intergenic | 30.0% | |
| AGTGGAATTCAAATGAATGT+TGG | + | chr1.3:53871218-53871237 | None:intergenic | 30.0% | |
| ATAGACAAAAGGAAGATTTC+AGG | + | chr1.3:53869718-53869737 | None:intergenic | 30.0% | |
| ATCTATCAATATCTAGCCAA+CGG | - | chr1.3:53870764-53870783 | MS.gene71451:intron | 30.0% | |
| ATTCCTTAACCAATGTCTAT+AGG | + | chr1.3:53872226-53872245 | None:intergenic | 30.0% | |
| ATTCTATTAACTGCAGTATG+TGG | + | chr1.3:53873376-53873395 | None:intergenic | 30.0% | |
| ATTGAATGAAACATTGGAGT+AGG | - | chr1.3:53870512-53870531 | MS.gene71451:intron | 30.0% | |
| CATAGCTTTCGTTAAAATCA+AGG | - | chr1.3:53869652-53869671 | MS.gene71451:intron | 30.0% | |
| GACTAATGATATATGAAGCT+TGG | + | chr1.3:53870871-53870890 | None:intergenic | 30.0% | |
| GATATAGAGAAGCTAAAGAT+GGG | - | chr1.3:53872868-53872887 | MS.gene71451:intron | 30.0% | |
| GATGGTATAGTGAAATTGAA+TGG | + | chr1.3:53870428-53870447 | None:intergenic | 30.0% | |
| GTATAGTGAAATTGAATGGA+AGG | + | chr1.3:53870424-53870443 | None:intergenic | 30.0% | |
| GTGAGAGAATATCTCAATTT+GGG | + | chr1.3:53869356-53869375 | None:intergenic | 30.0% | |
| GTGGAATTCAAATGAATGTT+GGG | + | chr1.3:53871217-53871236 | None:intergenic | 30.0% | |
| TAGAAGAAAAGAAAAGCGAA+TGG | + | chr1.3:53872443-53872462 | None:intergenic | 30.0% | |
| TATAAAGCTCTTAACTCTAG+GGG | - | chr1.3:53872566-53872585 | MS.gene71451:intron | 30.0% | |
| TGATGATAATCTCAAAGTAC+AGG | - | chr1.3:53870598-53870617 | MS.gene71451:intron | 30.0% | |
| TTAATTGTTTACATGGCTAC+AGG | + | chr1.3:53869823-53869842 | None:intergenic | 30.0% | |
| TTGATACTAATTAGCTGACA+AGG | + | chr1.3:53869895-53869914 | None:intergenic | 30.0% | |
| TTGTCTATATGTAAGTTTCC+AGG | - | chr1.3:53869730-53869749 | MS.gene71451:intron | 30.0% | |
| TTTGTGAATATTTCTTGCCA+TGG | + | chr1.3:53872826-53872845 | None:intergenic | 30.0% | |
| ! | AACAGTTTTGCATACTATCT+TGG | - | chr1.3:53873290-53873309 | MS.gene71451:intron | 30.0% |
| ! | ACTTTTTAACACCGATCATA+AGG | + | chr1.3:53870352-53870371 | None:intergenic | 30.0% |
| ! | ATGTTGGGATAAGTGTTTTT+CGG | + | chr1.3:53871202-53871221 | None:intergenic | 30.0% |
| ! | CTTTTCATGAATTGAATCCA+TGG | - | chr1.3:53870623-53870642 | MS.gene71451:intron | 30.0% |
| ! | TATTCTTAGCGCATTTGTTA+AGG | + | chr1.3:53872320-53872339 | None:intergenic | 30.0% |
| ! | TTTCCTATAGACATTGGTTA+AGG | - | chr1.3:53872220-53872239 | MS.gene71451:intron | 30.0% |
| ! | TTTCTTAATTTGGACACACA+TGG | + | chr1.3:53872081-53872100 | None:intergenic | 30.0% |
| !! | AATATGGTGCTATGTTTACA+GGG | - | chr1.3:53871771-53871790 | MS.gene71451:intron | 30.0% |
| !! | ACAAATATAGGTATCGAATG+GGG | - | chr1.3:53872841-53872860 | MS.gene71451:intron | 30.0% |
| !! | ATTGTTTTGTAAGAACAACC+AGG | + | chr1.3:53870276-53870295 | None:intergenic | 30.0% |
| !! | CACAAATATAGGTATCGAAT+GGG | - | chr1.3:53872840-53872859 | MS.gene71451:intron | 30.0% |
| !! | TAATATGGTGCTATGTTTAC+AGG | - | chr1.3:53871770-53871789 | MS.gene71451:intron | 30.0% |
| !! | TCACAAATATAGGTATCGAA+TGG | - | chr1.3:53872839-53872858 | MS.gene71451:intron | 30.0% |
| !! | TCAGTTATTTCGCTTTTCAT+TGG | - | chr1.3:53870843-53870862 | MS.gene71451:CDS | 30.0% |
| !! | TGTTTTTATTGTCGGTGAAT+TGG | - | chr1.3:53869588-53869607 | MS.gene71451:CDS | 30.0% |
| !! | TTATGATCGGTGTTAAAAAG+TGG | - | chr1.3:53870351-53870370 | MS.gene71451:intron | 30.0% |
| !! | TTTGAGATGTATTTTCGGTT+GGG | + | chr1.3:53871449-53871468 | None:intergenic | 30.0% |
| !!! | AGGTTCATAGTTTTTTTCGT+TGG | + | chr1.3:53872392-53872411 | None:intergenic | 30.0% |
| !!! | GGGCCATATAGAATTTTTTT+TGG | + | chr1.3:53869778-53869797 | None:intergenic | 30.0% |
| !!! | GGTTCATAGTTTTTTTCGTT+GGG | + | chr1.3:53872391-53872410 | None:intergenic | 30.0% |
| !!! | GTTCATAGTTTTTTTCGTTG+GGG | + | chr1.3:53872390-53872409 | None:intergenic | 30.0% |
| !!! | GTTTTGATTCTCTCAATCAT+AGG | - | chr1.3:53871408-53871427 | MS.gene71451:intron | 30.0% |
| !!! | TAGAATTTTTTTTGGTGAGG+AGG | + | chr1.3:53869770-53869789 | None:intergenic | 30.0% |
| !!! | TGTTTTTCGGGTGTTTATTT+GGG | + | chr1.3:53871189-53871208 | None:intergenic | 30.0% |
| !!! | TTCATAGTTTTTTTCGTTGG+GGG | + | chr1.3:53872389-53872408 | None:intergenic | 30.0% |
| !!! | TTTCGGTGGTTAGTTTTTAT+TGG | + | chr1.3:53870978-53870997 | None:intergenic | 30.0% |
| !!! | TTTTGAGATGTATTTTCGGT+TGG | + | chr1.3:53871450-53871469 | None:intergenic | 30.0% |
| AAACATGAAACAAGGGATTG+GGG | + | chr1.3:53869868-53869887 | None:intergenic | 35.0% | |
| AACGAGTTTCCTATAGACAT+TGG | - | chr1.3:53872214-53872233 | MS.gene71451:intron | 35.0% | |
| AATGAAACCAACACTGCTAT+GGG | - | chr1.3:53873500-53873519 | MS.gene71451:CDS | 35.0% | |
| ACATTGTTCTTTCTCCTTCA+AGG | - | chr1.3:53873543-53873562 | MS.gene71451:CDS | 35.0% | |
| AGCTTTCGTTAAAATCAAGG+TGG | - | chr1.3:53869655-53869674 | MS.gene71451:intron | 35.0% | |
| ATATCTCAATTTGGGCAACA+CGG | + | chr1.3:53869348-53869367 | None:intergenic | 35.0% | |
| CAACTGATGGAATTGAACAA+TGG | + | chr1.3:53872045-53872064 | None:intergenic | 35.0% | |
| CAAGTGATGTGGAAAACTTA+AGG | - | chr1.3:53873567-53873586 | MS.gene71451:CDS | 35.0% | |
| CACAATTAGTCGACTGTAAT+CGG | + | chr1.3:53871603-53871622 | None:intergenic | 35.0% | |
| CTACTATTGCTGAAAGCTTA+GGG | + | chr1.3:53870117-53870136 | None:intergenic | 35.0% | |
| CTTGGATATGTTTGGATTGA+TGG | + | chr1.3:53870446-53870465 | None:intergenic | 35.0% | |
| GAAAACATGAAACAAGGGAT+TGG | + | chr1.3:53869870-53869889 | None:intergenic | 35.0% | |
| GAGAGTAGCAAAGAATCTAA+AGG | - | chr1.3:53871807-53871826 | MS.gene71451:intron | 35.0% | |
| GAGATATTCTCTCACTATGT+TGG | - | chr1.3:53869361-53869380 | MS.gene71451:CDS | 35.0% | |
| GATAAGCAGTTTAAATACCG+AGG | - | chr1.3:53873454-53873473 | MS.gene71451:CDS | 35.0% | |
| GATTGCCAATAAAAGACATG+TGG | + | chr1.3:53870477-53870496 | None:intergenic | 35.0% | |
| GGATATAGAGAAGCTAAAGA+TGG | - | chr1.3:53872867-53872886 | MS.gene71451:intron | 35.0% | |
| GGGCTGATTAATTGTTTACA+TGG | + | chr1.3:53869830-53869849 | None:intergenic | 35.0% | |
| GGTGGACCGTTAAAAATAAT+TGG | + | chr1.3:53871582-53871601 | None:intergenic | 35.0% | |
| GTAAGTAGGAGGAGAAATAA+AGG | + | chr1.3:53869409-53869428 | None:intergenic | 35.0% | |
| GTATTGAAGTGGTAGAGTTA+AGG | + | chr1.3:53872018-53872037 | None:intergenic | 35.0% | |
| TAATGAAACCAACACTGCTA+TGG | - | chr1.3:53873499-53873518 | MS.gene71451:CDS | 35.0% | |
| TACAAAAGGTTCCCATGATA+AGG | + | chr1.3:53872790-53872809 | None:intergenic | 35.0% | |
| TCAAACAACATACAGCTACA+AGG | - | chr1.3:53869202-53869221 | MS.gene71451:CDS | 35.0% | |
| TCTACTATTGCTGAAAGCTT+AGG | + | chr1.3:53870118-53870137 | None:intergenic | 35.0% | |
| TCTATATGTAAGTTTCCAGG+TGG | - | chr1.3:53869733-53869752 | MS.gene71451:intron | 35.0% | |
| TGATTCTCACAATCTACAAG+TGG | - | chr1.3:53873403-53873422 | MS.gene71451:intron | 35.0% | |
| TGGGGTAATGATTTCTAACA+GGG | + | chr1.3:53869850-53869869 | None:intergenic | 35.0% | |
| TTATTGGGAGCAAGTTAATG+AGG | - | chr1.3:53872905-53872924 | MS.gene71451:intron | 35.0% | |
| TTCAGATCATTTGCAACTGA+TGG | + | chr1.3:53872058-53872077 | None:intergenic | 35.0% | |
| TTGGGGTAATGATTTCTAAC+AGG | + | chr1.3:53869851-53869870 | None:intergenic | 35.0% | |
| ! | ACACTTTCAATCAGAAGTGT+CGG | - | chr1.3:53869525-53869544 | MS.gene71451:CDS | 35.0% |
| ! | ACTTTAGTTTCTGCAGTGTA+TGG | + | chr1.3:53871015-53871034 | None:intergenic | 35.0% |
| ! | AGACATGTGGTTTAAAGTCT+TGG | + | chr1.3:53870464-53870483 | None:intergenic | 35.0% |
| ! | CTTTAGTTTCTGCAGTGTAT+GGG | + | chr1.3:53871014-53871033 | None:intergenic | 35.0% |
| ! | GTGATGAAAAGCCTTATGAT+CGG | - | chr1.3:53870338-53870357 | MS.gene71451:intron | 35.0% |
| ! | GTGTTTGGAACTTGTTTATG+TGG | + | chr1.3:53871070-53871089 | None:intergenic | 35.0% |
| ! | TGTTGGGATAAGTGTTTTTC+GGG | + | chr1.3:53871201-53871220 | None:intergenic | 35.0% |
| ! | TTCTGATTGAAAGTGTGTCT+CGG | + | chr1.3:53869521-53869540 | None:intergenic | 35.0% |
| ! | TTTAGTTTCTGCAGTGTATG+GGG | + | chr1.3:53871013-53871032 | None:intergenic | 35.0% |
| !! | AAAGTGAGGTGTTGTTATAG+GGG | + | chr1.3:53871149-53871168 | None:intergenic | 35.0% |
| !! | AGAAAGTGAGGTGTTGTTAT+AGG | + | chr1.3:53871151-53871170 | None:intergenic | 35.0% |
| !! | CAAATATAGGTATCGAATGG+GGG | - | chr1.3:53872842-53872861 | MS.gene71451:intron | 35.0% |
| !! | CTAGTGACAGCTCTAAATAA+AGG | - | chr1.3:53872741-53872760 | MS.gene71451:intron | 35.0% |
| !! | GAAAGTGAGGTGTTGTTATA+GGG | + | chr1.3:53871150-53871169 | None:intergenic | 35.0% |
| !! | GGTTTTGATGGTTTTTTGGA+GGG | + | chr1.3:53871118-53871137 | None:intergenic | 35.0% |
| !!! | ATGGTTTTGGCAGATCATTT+TGG | - | chr1.3:53872483-53872502 | MS.gene71451:intron | 35.0% |
| !!! | GTGTTTTTCGGGTGTTTATT+TGG | + | chr1.3:53871190-53871209 | None:intergenic | 35.0% |
| !!! | TCATAGTTTTTTTCGTTGGG+GGG | + | chr1.3:53872388-53872407 | None:intergenic | 35.0% |
| AAACAAATGGACAGTAGCCA+TGG | + | chr1.3:53870643-53870662 | None:intergenic | 40.0% | |
| AACATTTGAGCCAAGTCCAA+AGG | + | chr1.3:53870035-53870054 | None:intergenic | 40.0% | |
| AATTAGTCGACTGTAATCGG+TGG | + | chr1.3:53871600-53871619 | None:intergenic | 40.0% | |
| ACATTTGAGCCAAGTCCAAA+GGG | + | chr1.3:53870034-53870053 | None:intergenic | 40.0% | |
| ACCAACTAGCACAATTCTGT+AGG | + | chr1.3:53872988-53873007 | None:intergenic | 40.0% | |
| ACCTGAAGTTCTCAAATGCT+TGG | - | chr1.3:53873427-53873446 | MS.gene71451:CDS | 40.0% | |
| ACTTGTCTATTATCACCCAC+CGG | + | chr1.3:53870081-53870100 | None:intergenic | 40.0% | |
| ATGTAAGTGGGGAATGATCT+TGG | + | chr1.3:53869311-53869330 | None:intergenic | 40.0% | |
| CAAAACCTCAAACTGTATCG+TGG | - | chr1.3:53871040-53871059 | MS.gene71451:intron | 40.0% | |
| CATGGATGGTACCTTATCAT+GGG | - | chr1.3:53872776-53872795 | MS.gene71451:intron | 40.0% | |
| CCAACTAGCACAATTCTGTA+GGG | + | chr1.3:53872987-53873006 | None:intergenic | 40.0% | |
| GACTTGGCTCAAATGTTTGT+TGG | - | chr1.3:53870038-53870057 | MS.gene71451:CDS | 40.0% | |
| GAGAGCTATCATGACAAGAA+GGG | - | chr1.3:53873139-53873158 | MS.gene71451:intron | 40.0% | |
| GTGTCGTGTGTAAAGTAAGT+AGG | + | chr1.3:53869423-53869442 | None:intergenic | 40.0% | |
| TAAAGGACGAGATGTGATCA+TGG | - | chr1.3:53872758-53872777 | MS.gene71451:intron | 40.0% | |
| TCATGGATGGTACCTTATCA+TGG | - | chr1.3:53872775-53872794 | MS.gene71451:intron | 40.0% | |
| TCCAAGCATTTGAGAACTTC+AGG | + | chr1.3:53873431-53873450 | None:intergenic | 40.0% | |
| TCGTGTGTAAAGTAAGTAGG+AGG | + | chr1.3:53869420-53869439 | None:intergenic | 40.0% | |
| TGCCTAGCTGCAAAAACAAA+TGG | + | chr1.3:53870656-53870675 | None:intergenic | 40.0% | |
| TTAGTTTCTGCAGTGTATGG+GGG | + | chr1.3:53871012-53871031 | None:intergenic | 40.0% | |
| TTCATCGTAACCACAAGTGT+CGG | - | chr1.3:53869470-53869489 | MS.gene71451:intron | 40.0% | |
| ! | AAACTGTTTGCTACCTTTGG+TGG | + | chr1.3:53873278-53873297 | None:intergenic | 40.0% |
| ! | ATACAGCTACAAGGTACTAC+TGG | - | chr1.3:53869211-53869230 | MS.gene71451:CDS | 40.0% |
| ! | ATATTCTTTTGGCAGCCACA+AGG | - | chr1.3:53871470-53871489 | MS.gene71451:intron | 40.0% |
| ! | ATGTATTTTCGGTTGGGACT+CGG | + | chr1.3:53871443-53871462 | None:intergenic | 40.0% |
| ! | CTTTGATTCGTGCTCTTCTT+CGG | + | chr1.3:53872931-53872950 | None:intergenic | 40.0% |
| ! | GCAAAACTGTTTGCTACCTT+TGG | + | chr1.3:53873281-53873300 | None:intergenic | 40.0% |
| ! | GGAAGATTTCAGGTAACTAC+AGG | + | chr1.3:53869708-53869727 | None:intergenic | 40.0% |
| ! | GTTTTTGCAGCTAGGCAAAT+AGG | - | chr1.3:53870659-53870678 | MS.gene71451:intron | 40.0% |
| ! | TACAGTGTCACTGTAGTTCA+TGG | - | chr1.3:53869618-53869637 | MS.gene71451:CDS | 40.0% |
| !! | ACTTTATCAGGGCCTTGTTA+TGG | + | chr1.3:53871273-53871292 | None:intergenic | 40.0% |
| !! | AGGATTTGTTGATGCTAGTG+AGG | - | chr1.3:53870679-53870698 | MS.gene71451:intron | 40.0% |
| !! | CATGCACTTACTAAGTTGGT+AGG | + | chr1.3:53869570-53869589 | None:intergenic | 40.0% |
| !! | CGGTTTTGATGGTTTTTTGG+AGG | + | chr1.3:53871119-53871138 | None:intergenic | 40.0% |
| !! | GGTCGGTTTTGATGGTTTTT+TGG | + | chr1.3:53871122-53871141 | None:intergenic | 40.0% |
| !! | GTTGTTATAGGGGTTTTGGT+CGG | + | chr1.3:53871139-53871158 | None:intergenic | 40.0% |
| !! | TTGCTGTTGTTAGAGGCATT+AGG | - | chr1.3:53873027-53873046 | MS.gene71451:intron | 40.0% |
| !!! | AGGTGTTGTTATAGGGGTTT+TGG | + | chr1.3:53871143-53871162 | None:intergenic | 40.0% |
| !!! | CATAGTTTTTTTCGTTGGGG+GGG | + | chr1.3:53872387-53872406 | None:intergenic | 40.0% |
| !!! | GATGGTTTTTTGGAGGGTTT+TGG | + | chr1.3:53871112-53871131 | None:intergenic | 40.0% |
| !!! | GTCCATTTGTTTTTGCAGCT+AGG | - | chr1.3:53870651-53870670 | MS.gene71451:intron | 40.0% |
| !!! | TTTTTTTTGGTGAGGAGGAG+TGG | + | chr1.3:53869765-53869784 | None:intergenic | 40.0% |
| AAGTGAACAAGTTGCTCGAG+TGG | - | chr1.3:53869987-53870006 | MS.gene71451:CDS | 45.0% | |
| AGAGTTATGCAGATTGGCAC+AGG | - | chr1.3:53870706-53870725 | MS.gene71451:intron | 45.0% | |
| AGTGAACAAGTTGCTCGAGT+GGG | - | chr1.3:53869988-53870007 | MS.gene71451:CDS | 45.0% | |
| AGTTGCATGCGATAGGTGTT+TGG | + | chr1.3:53871085-53871104 | None:intergenic | 45.0% | |
| ATGTCATTCCAAACAGTGCC+AGG | + | chr1.3:53873527-53873546 | None:intergenic | 45.0% | |
| CACTTACATCAAACCGCATC+CGG | - | chr1.3:53869322-53869341 | MS.gene71451:CDS | 45.0% | |
| CATGCTCGAAACTGCTGAAT+TGG | - | chr1.3:53872601-53872620 | MS.gene71451:intron | 45.0% | |
| CCCTACAGAATTGTGCTAGT+TGG | - | chr1.3:53872984-53873003 | MS.gene71451:intron | 45.0% | |
| CGTTGAAGCTGATGCGTTTA+AGG | - | chr1.3:53872529-53872548 | MS.gene71451:intron | 45.0% | |
| CTCTCAAAGTTGTGACGTCA+AGG | - | chr1.3:53871882-53871901 | MS.gene71451:intron | 45.0% | |
| CTGGAGAAGACACCATAACA+AGG | - | chr1.3:53871258-53871277 | MS.gene71451:intron | 45.0% | |
| GATGCGGTTTGATGTAAGTG+GGG | + | chr1.3:53869322-53869341 | None:intergenic | 45.0% | |
| GCTATCGTCTGCTCTACAAA+AGG | + | chr1.3:53872804-53872823 | None:intergenic | 45.0% | |
| GGAGAGCTATCATGACAAGA+AGG | - | chr1.3:53873138-53873157 | MS.gene71451:intron | 45.0% | |
| GGATGCGGTTTGATGTAAGT+GGG | + | chr1.3:53869323-53869342 | None:intergenic | 45.0% | |
| GGTTCCAGAGTTATGCAGAT+TGG | - | chr1.3:53870700-53870719 | MS.gene71451:intron | 45.0% | |
| GTCATCCACGATACAGTTTG+AGG | + | chr1.3:53871048-53871067 | None:intergenic | 45.0% | |
| TATTACACGACTGATGTCCG+TGG | - | chr1.3:53873251-53873270 | MS.gene71451:intron | 45.0% | |
| TCAACCAATTGTGCCTACGT+AGG | + | chr1.3:53870180-53870199 | None:intergenic | 45.0% | |
| TCAATATCTAGCCAACGGAG+AGG | - | chr1.3:53870769-53870788 | MS.gene71451:intron | 45.0% | |
| TCCACATCACTTGACCTTGA+AGG | + | chr1.3:53873560-53873579 | None:intergenic | 45.0% | |
| TCCTTCAAGGTCAAGTGATG+TGG | - | chr1.3:53873556-53873575 | MS.gene71451:CDS | 45.0% | |
| TGTGCCAATCTGCATAACTC+TGG | + | chr1.3:53870707-53870726 | None:intergenic | 45.0% | |
| TGTTATGGTGTCTTCTCCAG+CGG | + | chr1.3:53871258-53871277 | None:intergenic | 45.0% | |
| TTCGTAGATGGAATCTGCCT+CGG | + | chr1.3:53873474-53873493 | None:intergenic | 45.0% | |
| ! | AGTCCAGTGTTGCTGCTTAT+GGG | - | chr1.3:53871931-53871950 | MS.gene71451:CDS | 45.0% |
| ! | CAAGGTACTACTGGTAGTGT+TGG | - | chr1.3:53869220-53869239 | MS.gene71451:CDS | 45.0% |
| ! | CAGAATTGTGCTAGTTGGTG+TGG | - | chr1.3:53872989-53873008 | MS.gene71451:intron | 45.0% |
| ! | CGAAGAAGAGCACGAATCAA+AGG | - | chr1.3:53872929-53872948 | MS.gene71451:intron | 45.0% |
| ! | CTAGTTGGTGTGGTTTGTGA+TGG | - | chr1.3:53872999-53873018 | MS.gene71451:intron | 45.0% |
| ! | CTCGAGCAACTTGTTCACTT+AGG | + | chr1.3:53869987-53870006 | None:intergenic | 45.0% |
| ! | GTCTGAAGCTTCAAATGCTG+TGG | - | chr1.3:53872505-53872524 | MS.gene71451:intron | 45.0% |
| ! | TGTTTGTTGGTCTGCGATTC+CGG | - | chr1.3:53870051-53870070 | MS.gene71451:CDS | 45.0% |
| !! | GCAAACTTGTTGACAGTGCA+AGG | - | chr1.3:53873225-53873244 | MS.gene71451:intron | 45.0% |
| !! | GGCTATCTTGCTGTTGTTAG+AGG | - | chr1.3:53873020-53873039 | MS.gene71451:intron | 45.0% |
| !! | TACCACCATTGATTCGACGA+TGG | + | chr1.3:53869284-53869303 | None:intergenic | 45.0% |
| !!! | TTTTAATAGAAAAATATAAA+TGG | + | chr1.3:53871664-53871683 | None:intergenic | 5.0% |
| ACTCCTCTCACTGTGGACAA+CGG | + | chr1.3:53871914-53871933 | None:intergenic | 50.0% | |
| AGCCTCCATCGTCGAATCAA+TGG | - | chr1.3:53869276-53869295 | MS.gene71451:CDS | 50.0% | |
| CAGAGATGATGCAGCATCAG+TGG | + | chr1.3:53872721-53872740 | None:intergenic | 50.0% | |
| CAGTTTCGAGCATGTCGTCA+TGG | + | chr1.3:53872595-53872614 | None:intergenic | 50.0% | |
| CGCTTCCACTCTGTAGTTAG+AGG | - | chr1.3:53870149-53870168 | MS.gene71451:intron | 50.0% | |
| CGGATGCGGTTTGATGTAAG+TGG | + | chr1.3:53869324-53869343 | None:intergenic | 50.0% | |
| CTACGCCTCTAACTACAGAG+TGG | + | chr1.3:53870157-53870176 | None:intergenic | 50.0% | |
| CTCCATCGTCGAATCAATGG+TGG | - | chr1.3:53869279-53869298 | MS.gene71451:CDS | 50.0% | |
| GAGCAACCTCACACATGTTG+TGG | - | chr1.3:53869252-53869271 | MS.gene71451:CDS | 50.0% | |
| GGACGAGATGTGATCATGGA+TGG | - | chr1.3:53872762-53872781 | MS.gene71451:intron | 50.0% | |
| GTAGCCTACGTAGGCACAAT+TGG | - | chr1.3:53870173-53870192 | MS.gene71451:intron | 50.0% | |
| TGAATTAGGGTCCTCTCCGT+TGG | + | chr1.3:53870783-53870802 | None:intergenic | 50.0% | |
| TGGTGTGAGTTGCATGCGAT+AGG | + | chr1.3:53871092-53871111 | None:intergenic | 50.0% | |
| TGTAGAGCAGACGATAGCCA+TGG | - | chr1.3:53872806-53872825 | MS.gene71451:intron | 50.0% | |
| TTCTGCAGTGTATGGGGGTT+TGG | + | chr1.3:53871007-53871026 | None:intergenic | 50.0% | |
| ! | GAGTCCAGTGTTGCTGCTTA+TGG | - | chr1.3:53871930-53871949 | MS.gene71451:CDS | 50.0% |
| ! | GTTTGTTGGTCTGCGATTCC+GGG | - | chr1.3:53870052-53870071 | MS.gene71451:CDS | 50.0% |
| ! | TTGCTACCTTTGGTGGACCA+CGG | + | chr1.3:53873271-53873290 | None:intergenic | 50.0% |
| ! | TTTGTTGGTCTGCGATTCCG+GGG | - | chr1.3:53870053-53870072 | MS.gene71451:CDS | 50.0% |
| !! | CACCATTGATTCGACGATGG+AGG | + | chr1.3:53869281-53869300 | None:intergenic | 50.0% |
| !! | GGGGTTTTGGTCGGTTTTGA+TGG | + | chr1.3:53871130-53871149 | None:intergenic | 50.0% |
| !! | GTAACCACAAGTGTCGGTGT+CGG | - | chr1.3:53869476-53869495 | MS.gene71451:intron | 50.0% |
| !! | TATAGGTATCGAATGGGGGC+AGG | - | chr1.3:53872846-53872865 | MS.gene71451:intron | 50.0% |
| ACACTGGACTCCTCTCACTG+TGG | + | chr1.3:53871921-53871940 | None:intergenic | 55.0% | |
| ACCAACACTGCTATGGGACC+TGG | - | chr1.3:53873506-53873525 | MS.gene71451:CDS | 55.0% | |
| AGGCTGCCACAACATGTGTG+AGG | + | chr1.3:53869261-53869280 | None:intergenic | 55.0% | |
| AGTGTATGGGGGTTTGGCGT+TGG | + | chr1.3:53871001-53871020 | None:intergenic | 55.0% | |
| CCACCCATAAGCAGCAACAC+TGG | + | chr1.3:53871937-53871956 | None:intergenic | 55.0% | |
| CTATGGGACCTGGCACTGTT+TGG | - | chr1.3:53873516-53873535 | MS.gene71451:CDS | 55.0% | |
| CTCAATTTGGGCAACACGGC+CGG | + | chr1.3:53869344-53869363 | None:intergenic | 55.0% | |
| GAGCGATTGCCCTTTGGACT+TGG | - | chr1.3:53870022-53870041 | MS.gene71451:CDS | 55.0% | |
| GTCCAAAGGGCAATCGCTCT+CGG | + | chr1.3:53870021-53870040 | None:intergenic | 55.0% | |
| GTGTCGGACACGACATGTGT+TGG | - | chr1.3:53869492-53869511 | MS.gene71451:intron | 55.0% | |
| TGATGTCCGTGGTCCACCAA+AGG | - | chr1.3:53873262-53873281 | MS.gene71451:intron | 55.0% | |
| TTCCACTACCAATCGACCCC+CGG | - | chr1.3:53871231-53871250 | MS.gene71451:intron | 55.0% | |
| ! | CCAGTGTTGCTGCTTATGGG+TGG | - | chr1.3:53871934-53871953 | MS.gene71451:CDS | 55.0% |
| ! | CTGCTTATGGGTGGAGGCAT+GGG | - | chr1.3:53871943-53871962 | MS.gene71451:CDS | 55.0% |
| ! | GTGTTGCTGCTTATGGGTGG+AGG | - | chr1.3:53871937-53871956 | MS.gene71451:CDS | 55.0% |
| ! | GTTAGAGGCGTAGCCTACGT+AGG | - | chr1.3:53870164-53870183 | MS.gene71451:intron | 55.0% |
| !! | TGGGGGTTTGGCGTTGGTTT+CGG | + | chr1.3:53870995-53871014 | None:intergenic | 55.0% |
| AGCCGAGAGCGATTGCCCTT+TGG | - | chr1.3:53870016-53870035 | MS.gene71451:CDS | 60.0% | |
| ATTATCACCCACCGGCACCC+CGG | + | chr1.3:53870073-53870092 | None:intergenic | 60.0% | |
| CCTCTCACTGTGGACAACGG+CGG | + | chr1.3:53871911-53871930 | None:intergenic | 60.0% | |
| GAGGAGTGGCAAACACCACC+TGG | + | chr1.3:53869751-53869770 | None:intergenic | 60.0% | |
| GCCAGGTCCCATAGCAGTGT+TGG | + | chr1.3:53873510-53873529 | None:intergenic | 60.0% | |
| GCTGCTTATGGGTGGAGGCA+TGG | - | chr1.3:53871942-53871961 | MS.gene71451:CDS | 60.0% | |
| GTGTCCGACACCGACACTTG+TGG | + | chr1.3:53869483-53869502 | None:intergenic | 60.0% | |
| TGGTGTCTTCTCCAGCGGAC+CGG | + | chr1.3:53871253-53871272 | None:intergenic | 60.0% | |
| ! | ATGGGTGGAGGCATGGGATC+TGG | - | chr1.3:53871949-53871968 | MS.gene71451:CDS | 60.0% |
| !! | GGGTTTGGCGTTGGTTTCGG+TGG | + | chr1.3:53870992-53871011 | None:intergenic | 60.0% |
| CCGCCGTTGTCCACAGTGAG+AGG | - | chr1.3:53871908-53871927 | MS.gene71451:CDS | 65.0% | |
| GACCGGGGGTCGATTGGTAG+TGG | + | chr1.3:53871236-53871255 | None:intergenic | 65.0% | |
| GGTGTCTTCTCCAGCGGACC+GGG | + | chr1.3:53871252-53871271 | None:intergenic | 65.0% | |
| GTGTCTTCTCCAGCGGACCG+GGG | + | chr1.3:53871251-53871270 | None:intergenic | 65.0% | |
| TGTCTTCTCCAGCGGACCGG+GGG | + | chr1.3:53871250-53871269 | None:intergenic | 65.0% | |
| TTGGGCAACACGGCCGGATG+CGG | + | chr1.3:53869338-53869357 | None:intergenic | 65.0% | |
| GGTCTGCGATTCCGGGGTGC+CGG | - | chr1.3:53870059-53870078 | MS.gene71451:CDS | 70.0% | |
| !! | TGCGATTCCGGGGTGCCGGT+GGG | - | chr1.3:53870063-53870082 | MS.gene71451:CDS | 70.0% |
| CCAATCGACCCCCGGTCCGC+TGG | - | chr1.3:53871239-53871258 | MS.gene71451:intron | 75.0% | |
| CCAGCGGACCGGGGGTCGAT+TGG | + | chr1.3:53871242-53871261 | None:intergenic | 75.0% | |
| !! | CTGCGATTCCGGGGTGCCGG+TGG | - | chr1.3:53870062-53870081 | MS.gene71451:CDS | 75.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.3 | gene | 53869169 | 53873631 | 53869169 | ID=MS.gene71451 |
| chr1.3 | mRNA | 53869169 | 53873631 | 53869169 | ID=MS.gene71451.t1;Parent=MS.gene71451 |
| chr1.3 | exon | 53873418 | 53873631 | 53873418 | ID=MS.gene71451.t1.exon1;Parent=MS.gene71451.t1 |
| chr1.3 | CDS | 53873418 | 53873631 | 53873418 | ID=cds.MS.gene71451.t1;Parent=MS.gene71451.t1 |
| chr1.3 | exon | 53871908 | 53872131 | 53871908 | ID=MS.gene71451.t1.exon2;Parent=MS.gene71451.t1 |
| chr1.3 | CDS | 53871908 | 53872131 | 53871908 | ID=cds.MS.gene71451.t1;Parent=MS.gene71451.t1 |
| chr1.3 | exon | 53871309 | 53871370 | 53871309 | ID=MS.gene71451.t1.exon3;Parent=MS.gene71451.t1 |
| chr1.3 | CDS | 53871309 | 53871370 | 53871309 | ID=cds.MS.gene71451.t1;Parent=MS.gene71451.t1 |
| chr1.3 | exon | 53870796 | 53871008 | 53870796 | ID=MS.gene71451.t1.exon4;Parent=MS.gene71451.t1 |
| chr1.3 | CDS | 53870796 | 53871008 | 53870796 | ID=cds.MS.gene71451.t1;Parent=MS.gene71451.t1 |
| chr1.3 | exon | 53870178 | 53870304 | 53870178 | ID=MS.gene71451.t1.exon5;Parent=MS.gene71451.t1 |
| chr1.3 | CDS | 53870178 | 53870304 | 53870178 | ID=cds.MS.gene71451.t1;Parent=MS.gene71451.t1 |
| chr1.3 | exon | 53869752 | 53870095 | 53869752 | ID=MS.gene71451.t1.exon6;Parent=MS.gene71451.t1 |
| chr1.3 | CDS | 53869752 | 53870095 | 53869752 | ID=cds.MS.gene71451.t1;Parent=MS.gene71451.t1 |
| chr1.3 | exon | 53869517 | 53869661 | 53869517 | ID=MS.gene71451.t1.exon7;Parent=MS.gene71451.t1 |
| chr1.3 | CDS | 53869517 | 53869661 | 53869517 | ID=cds.MS.gene71451.t1;Parent=MS.gene71451.t1 |
| chr1.3 | exon | 53869169 | 53869414 | 53869169 | ID=MS.gene71451.t1.exon8;Parent=MS.gene71451.t1 |
| chr1.3 | CDS | 53869169 | 53869414 | 53869169 | ID=cds.MS.gene71451.t1;Parent=MS.gene71451.t1 |
| Gene Sequence |
| Protein sequence |
