Alfalfa Gene Editing Database
Alfalfa Gene Editing Database
Nr:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71685.t1 | AFK48785.1 | 97.2 | 179 | 5 | 0 | 2 | 180 | 26 | 204 | 1.30E-87 | 332.4 |
Swissprot:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71685.t1 | Q9LT71 | 53.6 | 179 | 75 | 1 | 2 | 180 | 30 | 200 | 1.3e-40 | 167.5 |
Trembl:
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71685.t1 | I3T8E3 | 97.2 | 179 | 5 | 0 | 2 | 180 | 26 | 204 | 9.3e-88 | 332.4 |
TFs/TRs:
| Gene ID | Type | Classification |
|---|
Protein Kinases:
| Gene ID | Type | Classification |
|---|
Network:
Co-expression Network:
| Gene1 | Gene2 | correlation coefficient | p_value | FDR |
|---|---|---|---|---|
| MS.gene049499 | MS.gene71685 | 0.801964 | 7.02E-49 | -1.69E-46 |
| MS.gene051699 | MS.gene71685 | 0.80096 | 1.13E-48 | -1.69E-46 |
| MS.gene05686 | MS.gene71685 | 0.813074 | 3.08E-51 | -1.69E-46 |
| MS.gene058159 | MS.gene71685 | 0.829733 | 4.36E-55 | -1.69E-46 |
| MS.gene060937 | MS.gene71685 | 0.804818 | 1.80E-49 | -1.69E-46 |
| MS.gene061188 | MS.gene71685 | 0.802789 | 4.75E-49 | -1.69E-46 |
PPI:
| Gene1 | Gene2 | Type |
|---|
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71685.t1 | MTR_1g107445 | 97.207 | 179 | 5 | 0 | 2 | 180 | 26 | 204 | 1.15e-124 | 349 |
| MS.gene71685.t1 | MTR_8g099060 | 35.754 | 179 | 112 | 1 | 3 | 178 | 80 | 258 | 1.90e-31 | 114 |
| MS.gene71685.t1 | MTR_8g028450 | 32.222 | 180 | 118 | 1 | 2 | 177 | 86 | 265 | 3.80e-25 | 98.2 |
| MS.gene71685.t1 | MTR_4g014700 | 39.326 | 178 | 106 | 1 | 4 | 179 | 31 | 208 | 5.05e-24 | 94.0 |
| MS.gene71685.t1 | MTR_1g099500 | 32.749 | 171 | 112 | 1 | 3 | 170 | 73 | 243 | 2.12e-23 | 93.2 |
| MS.gene71685.t1 | MTR_3g449880 | 33.951 | 162 | 104 | 1 | 3 | 161 | 65 | 226 | 6.45e-23 | 91.7 |
| MS.gene71685.t1 | MTR_3g449880 | 33.951 | 162 | 104 | 1 | 3 | 161 | 43 | 204 | 7.20e-23 | 91.3 |
| MS.gene71685.t1 | MTR_5g018250 | 27.273 | 176 | 123 | 1 | 10 | 180 | 49 | 224 | 2.36e-21 | 87.4 |
| MS.gene71685.t1 | MTR_6g012460 | 32.386 | 176 | 119 | 0 | 3 | 178 | 22 | 197 | 4.21e-21 | 86.3 |
| MS.gene71685.t1 | MTR_1g109630 | 27.545 | 167 | 117 | 1 | 14 | 180 | 44 | 206 | 6.98e-20 | 83.2 |
| MS.gene71685.t1 | MTR_5g090340 | 31.694 | 183 | 116 | 3 | 3 | 180 | 109 | 287 | 1.05e-19 | 84.3 |
| MS.gene71685.t1 | MTR_5g090340 | 31.694 | 183 | 116 | 3 | 3 | 180 | 112 | 290 | 1.08e-19 | 84.3 |
| MS.gene71685.t1 | MTR_5g018080 | 29.457 | 129 | 91 | 0 | 6 | 134 | 27 | 155 | 5.18e-18 | 77.0 |
| MS.gene71685.t1 | MTR_5g018190 | 29.851 | 134 | 94 | 0 | 10 | 143 | 296 | 429 | 2.97e-17 | 78.6 |
| MS.gene71685.t1 | MTR_5g018110 | 27.907 | 129 | 93 | 0 | 6 | 134 | 353 | 481 | 1.20e-14 | 71.2 |
| MS.gene71685.t1 | MTR_6g012460 | 35.246 | 122 | 79 | 0 | 3 | 124 | 22 | 143 | 9.32e-12 | 61.6 |
| Query id | Subject id | identity % | alignment length | mismatches | gap openings | q. start | q. end | s. start | s. end | e-value | bit score |
|---|---|---|---|---|---|---|---|---|---|---|---|
| MS.gene71685.t1 | AT3G19460 | 53.591 | 181 | 73 | 2 | 3 | 180 | 28 | 200 | 2.35e-57 | 179 |
| MS.gene71685.t1 | AT3G19460 | 53.591 | 181 | 73 | 2 | 3 | 180 | 28 | 200 | 2.35e-57 | 179 |
| MS.gene71685.t1 | AT3G19460 | 53.591 | 181 | 73 | 2 | 3 | 180 | 28 | 200 | 2.35e-57 | 179 |
| MS.gene71685.t1 | AT2G15280 | 48.333 | 180 | 92 | 1 | 2 | 180 | 22 | 201 | 1.09e-55 | 174 |
| MS.gene71685.t1 | AT3G19460 | 45.581 | 215 | 72 | 3 | 3 | 180 | 12 | 218 | 3.30e-52 | 166 |
| MS.gene71685.t1 | AT3G19460 | 45.581 | 215 | 72 | 3 | 3 | 180 | 12 | 218 | 3.30e-52 | 166 |
| MS.gene71685.t1 | AT3G19460 | 45.581 | 215 | 72 | 3 | 3 | 180 | 28 | 234 | 4.96e-52 | 166 |
| MS.gene71685.t1 | AT3G19460 | 45.581 | 215 | 72 | 3 | 3 | 180 | 28 | 234 | 4.96e-52 | 166 |
| MS.gene71685.t1 | AT2G15280 | 38.333 | 180 | 71 | 2 | 2 | 180 | 22 | 162 | 3.09e-35 | 121 |
| MS.gene71685.t1 | AT4G23630 | 36.932 | 176 | 105 | 3 | 5 | 178 | 102 | 273 | 8.06e-29 | 108 |
| MS.gene71685.t1 | AT4G23630 | 36.932 | 176 | 105 | 3 | 5 | 178 | 102 | 273 | 8.06e-29 | 108 |
| MS.gene71685.t1 | AT2G46170 | 35.758 | 165 | 106 | 0 | 13 | 177 | 87 | 251 | 6.26e-27 | 102 |
| MS.gene71685.t1 | AT1G64090 | 34.831 | 178 | 109 | 2 | 3 | 175 | 70 | 245 | 1.12e-26 | 102 |
| MS.gene71685.t1 | AT5G41600 | 32.973 | 185 | 113 | 3 | 3 | 178 | 74 | 256 | 1.14e-26 | 102 |
| MS.gene71685.t1 | AT1G64090 | 34.857 | 175 | 107 | 2 | 3 | 172 | 86 | 258 | 1.41e-26 | 102 |
| MS.gene71685.t1 | AT4G11220 | 31.609 | 174 | 117 | 1 | 5 | 178 | 98 | 269 | 1.73e-26 | 102 |
| MS.gene71685.t1 | AT3G10915 | 32.584 | 178 | 117 | 1 | 3 | 177 | 14 | 191 | 3.20e-26 | 99.4 |
| MS.gene71685.t1 | AT3G10915 | 32.402 | 179 | 118 | 1 | 3 | 178 | 15 | 193 | 3.72e-26 | 99.4 |
| MS.gene71685.t1 | AT3G61560 | 33.708 | 178 | 115 | 1 | 3 | 177 | 74 | 251 | 4.64e-26 | 100 |
| MS.gene71685.t1 | AT3G61560 | 33.708 | 178 | 115 | 1 | 3 | 177 | 74 | 251 | 4.64e-26 | 100 |
| MS.gene71685.t1 | AT3G10915 | 33.136 | 169 | 113 | 0 | 10 | 178 | 57 | 225 | 6.02e-26 | 99.4 |
| MS.gene71685.t1 | AT3G10915 | 33.333 | 168 | 112 | 0 | 10 | 177 | 82 | 249 | 1.13e-25 | 99.4 |
| MS.gene71685.t1 | AT3G10915 | 33.529 | 170 | 112 | 1 | 10 | 178 | 57 | 226 | 4.69e-25 | 97.1 |
| MS.gene71685.t1 | AT3G10915 | 33.728 | 169 | 111 | 1 | 10 | 177 | 79 | 247 | 9.10e-25 | 97.1 |
| MS.gene71685.t1 | AT3G18260 | 29.609 | 179 | 123 | 1 | 3 | 178 | 45 | 223 | 8.57e-24 | 94.0 |
| MS.gene71685.t1 | AT3G10260 | 32.240 | 183 | 117 | 4 | 3 | 180 | 67 | 247 | 1.58e-22 | 90.9 |
| MS.gene71685.t1 | AT3G10260 | 32.240 | 183 | 117 | 4 | 3 | 180 | 67 | 247 | 1.58e-22 | 90.9 |
| MS.gene71685.t1 | AT3G10260 | 32.240 | 183 | 117 | 4 | 3 | 180 | 87 | 267 | 1.99e-22 | 91.3 |
| MS.gene71685.t1 | AT3G54120 | 41.216 | 148 | 80 | 2 | 1 | 143 | 28 | 173 | 4.11e-22 | 89.0 |
| MS.gene71685.t1 | AT3G61560 | 37.302 | 126 | 76 | 1 | 3 | 125 | 74 | 199 | 2.06e-19 | 82.0 |
| MS.gene71685.t1 | AT4G01230 | 33.333 | 174 | 106 | 6 | 3 | 171 | 74 | 242 | 9.33e-15 | 70.1 |
| MS.gene71685.t1 | AT4G01230 | 33.333 | 174 | 106 | 6 | 3 | 171 | 76 | 244 | 1.05e-14 | 70.1 |
| MS.gene71685.t1 | AT2G23640 | 22.599 | 177 | 133 | 1 | 8 | 180 | 30 | 206 | 2.35e-13 | 65.9 |
| MS.gene71685.t1 | AT3G10915 | 32.979 | 94 | 63 | 0 | 10 | 103 | 57 | 150 | 1.24e-11 | 60.5 |
| MS.gene71685.t1 | AT2G46170 | 34.524 | 84 | 55 | 0 | 13 | 96 | 87 | 170 | 4.41e-11 | 59.3 |
Find 35 sgRNAs with CRISPR-Local
Find 62 sgRNAs with CRISPR-GE
CRISPR-Local
| sgRNA_sequence | on_target_score | Position | Region |
|---|---|---|---|
| TTTCTGATGTACTGCAAATT+TGG | 0.179244 | 1.1:+77149284 | MS.gene71685:CDS |
| TTGTTGTGATTCTGTTTCTA+TGG | 0.238941 | 1.1:+77148780 | MS.gene71685:CDS |
| TCTGCCTGATCTGGAGATTT+CGG | 0.363024 | 1.1:+77149243 | MS.gene71685:CDS |
| ACTTCCTCCTCTGCCTGATC+TGG | 0.365713 | 1.1:+77149234 | MS.gene71685:CDS |
| ACTGCAAATTTGGCTAAATC+AGG | 0.373614 | 1.1:+77149294 | MS.gene71685:CDS |
| AAGCTGCTAATCTTCTTAAC+AGG | 0.392636 | 1.1:+77148807 | MS.gene71685:CDS |
| CACATGATATAGCAATTAAC+AGG | 0.396290 | 1.1:+77149329 | MS.gene71685:CDS |
| TTGTTGACAATATCTTATAT+TGG | 0.407398 | 1.1:+77149494 | MS.gene71685:CDS |
| TTGGCTAAATCAGGCTTTGT+CGG | 0.437383 | 1.1:+77149303 | MS.gene71685:CDS |
| ACTTGGTGAATCAGGTTGTT+GGG | 0.454940 | 1.1:+77149468 | MS.gene71685:intron |
| TTCTCCGAAATCTCCAGATC+AGG | 0.456361 | 1.1:-77149247 | None:intergenic |
| AAACGATAAGAAATTGTAAC+CGG | 0.457016 | 1.1:-77148735 | None:intergenic |
| TGTTGTGATTCTGTTTCTAT+GGG | 0.474872 | 1.1:+77148781 | MS.gene71685:CDS |
| TGGTATCTGTTCGAGCGAGC+CGG | 0.484056 | 1.1:+77148716 | MS.gene71685:CDS |
| TACATATGTAGATCAAAGTC+AGG | 0.491717 | 1.1:-77149532 | None:intergenic |
| AGATCAGGCAGAGGAGGAAG+TGG | 0.496919 | 1.1:-77149232 | None:intergenic |
| CAAAGAAAAGAAAGTGCAGT+AGG | 0.516683 | 1.1:+77149800 | MS.gene71685:CDS |
| AACTTGGTGAATCAGGTTGT+TGG | 0.517512 | 1.1:+77149467 | MS.gene71685:intron |
| TCTTCTCATCAATTCGATCC+TGG | 0.524568 | 1.1:-77149695 | None:intergenic |
| ATCTCCAGATCAGGCAGAGG+AGG | 0.526888 | 1.1:-77149238 | None:intergenic |
| CACAGTATCAAAAGATTCGC+AGG | 0.529807 | 1.1:+77149745 | MS.gene71685:CDS |
| GAATTTGTTTCTCTGTGCAC+AGG | 0.543756 | 1.1:+77149351 | MS.gene71685:CDS |
| GAGAAGATTCATGTGGTACA+TGG | 0.548698 | 1.1:+77149711 | MS.gene71685:CDS |
| CTTGGTGAATCAGGTTGTTG+GGG | 0.553448 | 1.1:+77149469 | MS.gene71685:intron |
| CTGGTACTTGTCATATGCCA+CGG | 0.562166 | 1.1:-77149676 | None:intergenic |
| CGTGGCATATGACAAGTACC+AGG | 0.566409 | 1.1:+77149677 | MS.gene71685:CDS |
| TCTTAGCTTGTCTCTTCCCG+TGG | 0.595833 | 1.1:+77149659 | MS.gene71685:CDS |
| TGGTACTTGTCATATGCCAC+GGG | 0.597209 | 1.1:-77149675 | None:intergenic |
| AGAAGATTCATGTGGTACAT+GGG | 0.608693 | 1.1:+77149712 | MS.gene71685:CDS |
| TGATTTCTGCAACCACATTG+TGG | 0.618418 | 1.1:+77148696 | MS.gene71685:CDS |
| CTATGGAAGAATTGGCGTGG+AGG | 0.619260 | 1.1:+77148662 | MS.gene71685:intron |
| GAAATCTCCAGATCAGGCAG+AGG | 0.635921 | 1.1:-77149241 | None:intergenic |
| TTGCTATGGAAGAATTGGCG+TGG | 0.691195 | 1.1:+77148659 | MS.gene71685:intron |
| AATTGATGAGAAGATTCATG+TGG | 0.715992 | 1.1:+77149704 | MS.gene71685:CDS |
| CTCGAACAGATACCACAATG+TGG | 0.752392 | 1.1:-77148708 | None:intergenic |
CRISPR-GE
| badsite warning | sgRNA_sequence | Strand | Position | Region | GC_content |
|---|---|---|---|---|---|
| !! | AATAAAATAATTTCAATCAT+AGG | - | chr1.1:77149199-77149218 | None:intergenic | 10.0% |
| !! | TTCTATCTTGAAAACAAAAT+CGG | + | chr1.1:77148591-77148610 | MS.gene71685:intron | 20.0% |
| !! | TTGTTGACAATATCTTATAT+TGG | + | chr1.1:77149494-77149513 | MS.gene71685:CDS | 20.0% |
| !!! | AATTGACCTTGTTTATAATT+CGG | + | chr1.1:77148554-77148573 | MS.gene71685:intron | 20.0% |
| ! | AAACGATAAGAAATTGTAAC+CGG | - | chr1.1:77148738-77148757 | None:intergenic | 25.0% |
| ! | ACGAGATTAATTGGAAATTT+AGG | - | chr1.1:77148886-77148905 | None:intergenic | 25.0% |
| ! | AGTGTAAGTAAGAAAACTAA+AGG | - | chr1.1:77148530-77148549 | None:intergenic | 25.0% |
| ! | ATTTCTGTAATGATCATTTC+AGG | + | chr1.1:77149630-77149649 | MS.gene71685:intron | 25.0% |
| ! | TGTTGAAGATTGAAAGAAAT+CGG | - | chr1.1:77148504-77148523 | None:intergenic | 25.0% |
| ! | TTTGTTTATGTTGAGTTCTA+TGG | + | chr1.1:77149399-77149418 | MS.gene71685:intron | 25.0% |
| AATTGATGAGAAGATTCATG+TGG | + | chr1.1:77149704-77149723 | MS.gene71685:CDS | 30.0% | |
| CACATGATATAGCAATTAAC+AGG | + | chr1.1:77149329-77149348 | MS.gene71685:CDS | 30.0% | |
| CATGAACCGAATTATAAACA+AGG | - | chr1.1:77148563-77148582 | None:intergenic | 30.0% | |
| TACATATGTAGATCAAAGTC+AGG | - | chr1.1:77149535-77149554 | None:intergenic | 30.0% | |
| TTTCTGATGTACTGCAAATT+TGG | + | chr1.1:77149284-77149303 | MS.gene71685:CDS | 30.0% | |
| ! | TTTTCTTTGCTTGAACGATT+TGG | - | chr1.1:77149789-77149808 | None:intergenic | 30.0% |
| !! | TGTTGTGATTCTGTTTCTAT+GGG | + | chr1.1:77148781-77148800 | MS.gene71685:CDS | 30.0% |
| !! | TTGTTGTGATTCTGTTTCTA+TGG | + | chr1.1:77148780-77148799 | MS.gene71685:CDS | 30.0% |
| AAGCTGCTAATCTTCTTAAC+AGG | + | chr1.1:77148807-77148826 | MS.gene71685:CDS | 35.0% | |
| ACTGCAAATTTGGCTAAATC+AGG | + | chr1.1:77149294-77149313 | MS.gene71685:CDS | 35.0% | |
| AGAAGATTCATGTGGTACAT+GGG | + | chr1.1:77149712-77149731 | MS.gene71685:CDS | 35.0% | |
| CCAATTAATCTCGTTTGAGA+GGG | + | chr1.1:77148892-77148911 | MS.gene71685:intron | 35.0% | |
| GAAATTCTCTCTGTGTAAGT+TGG | + | chr1.1:77149600-77149619 | MS.gene71685:intron | 35.0% | |
| GAAGATTGAAAGAAATCGGA+AGG | - | chr1.1:77148500-77148519 | None:intergenic | 35.0% | |
| GACACTTGTTTGTATGAACT+TGG | + | chr1.1:77149451-77149470 | MS.gene71685:intron | 35.0% | |
| TCCAATTAATCTCGTTTGAG+AGG | + | chr1.1:77148891-77148910 | MS.gene71685:intron | 35.0% | |
| ! | ATGTGTTGCTATGGAAGAAT+TGG | + | chr1.1:77148654-77148673 | MS.gene71685:intron | 35.0% |
| ! | TGCGAATCTTTTGATACTGT+GGG | - | chr1.1:77149746-77149765 | None:intergenic | 35.0% |
| ! | TTGTATGAACTTGGTGAATC+AGG | + | chr1.1:77149460-77149479 | MS.gene71685:intron | 35.0% |
| CACAGTATCAAAAGATTCGC+AGG | + | chr1.1:77149745-77149764 | MS.gene71685:CDS | 40.0% | |
| CCCTCTCAAACGAGATTAAT+TGG | - | chr1.1:77148895-77148914 | None:intergenic | 40.0% | |
| GAGAAGATTCATGTGGTACA+TGG | + | chr1.1:77149711-77149730 | MS.gene71685:CDS | 40.0% | |
| TCTTCTCATCAATTCGATCC+TGG | - | chr1.1:77149698-77149717 | None:intergenic | 40.0% | |
| TGATGAACGGAAATTCGTTG+AGG | - | chr1.1:77148432-77148451 | None:intergenic | 40.0% | |
| TGATTTCTGCAACCACATTG+TGG | + | chr1.1:77148696-77148715 | MS.gene71685:CDS | 40.0% | |
| ! | AACTTGGTGAATCAGGTTGT+TGG | + | chr1.1:77149467-77149486 | MS.gene71685:intron | 40.0% |
| ! | ACTTGGTGAATCAGGTTGTT+GGG | + | chr1.1:77149468-77149487 | MS.gene71685:intron | 40.0% |
| ! | CTGCGAATCTTTTGATACTG+TGG | - | chr1.1:77149747-77149766 | None:intergenic | 40.0% |
| ! | GAATTTGTTTCTCTGTGCAC+AGG | + | chr1.1:77149351-77149370 | MS.gene71685:CDS | 40.0% |
| ! | TAGTTGCTGATGTGTTGCTA+TGG | + | chr1.1:77148645-77148664 | MS.gene71685:intron | 40.0% |
| ! | TTGGCTAAATCAGGCTTTGT+CGG | + | chr1.1:77149303-77149322 | MS.gene71685:CDS | 40.0% |
| ATTTCCGTTCATCACGCTCT+CGG | + | chr1.1:77148438-77148457 | MS.gene71685:intron | 45.0% | |
| CTCGAACAGATACCACAATG+TGG | - | chr1.1:77148711-77148730 | None:intergenic | 45.0% | |
| CTGGTACTTGTCATATGCCA+CGG | - | chr1.1:77149679-77149698 | None:intergenic | 45.0% | |
| TCTGCCTGATCTGGAGATTT+CGG | + | chr1.1:77149243-77149262 | MS.gene71685:CDS | 45.0% | |
| TGGTACTTGTCATATGCCAC+GGG | - | chr1.1:77149678-77149697 | None:intergenic | 45.0% | |
| TTCTCCGAAATCTCCAGATC+AGG | - | chr1.1:77149250-77149269 | None:intergenic | 45.0% | |
| TTGCTATGGAAGAATTGGCG+TGG | + | chr1.1:77148659-77148678 | MS.gene71685:intron | 45.0% | |
| ! | CTTGGTGAATCAGGTTGTTG+GGG | + | chr1.1:77149469-77149488 | MS.gene71685:intron | 45.0% |
| AATCGGAAGGAGAGAGAGAG+AGG | - | chr1.1:77148487-77148506 | None:intergenic | 50.0% | |
| ATCGGAAGGAGAGAGAGAGA+GGG | - | chr1.1:77148486-77148505 | None:intergenic | 50.0% | |
| CGTGGCATATGACAAGTACC+AGG | + | chr1.1:77149677-77149696 | MS.gene71685:CDS | 50.0% | |
| CTATGGAAGAATTGGCGTGG+AGG | + | chr1.1:77148662-77148681 | MS.gene71685:intron | 50.0% | |
| GAAATCTCCAGATCAGGCAG+AGG | - | chr1.1:77149244-77149263 | None:intergenic | 50.0% | |
| !! | TCTTAGCTTGTCTCTTCCCG+TGG | + | chr1.1:77149659-77149678 | MS.gene71685:CDS | 50.0% |
| ACTTCCTCCTCTGCCTGATC+TGG | + | chr1.1:77149234-77149253 | MS.gene71685:CDS | 55.0% | |
| AGATCAGGCAGAGGAGGAAG+TGG | - | chr1.1:77149235-77149254 | None:intergenic | 55.0% | |
| ATCTCCAGATCAGGCAGAGG+AGG | - | chr1.1:77149241-77149260 | None:intergenic | 55.0% | |
| TGGTATCTGTTCGAGCGAGC+CGG | + | chr1.1:77148716-77148735 | MS.gene71685:CDS | 55.0% | |
| ! | AGAGCCGAGAGCGTGATGAA+CGG | - | chr1.1:77148445-77148464 | None:intergenic | 55.0% |
| GTTCATCACGCTCTCGGCTC+TGG | + | chr1.1:77148444-77148463 | MS.gene71685:intron | 60.0% | |
| ! | CACGCTCTCGGCTCTGGCTT+AGG | + | chr1.1:77148450-77148469 | MS.gene71685:intron | 65.0% |
| Chromosome | Type | Strat | End | Strand | Name |
|---|---|---|---|---|---|
| chr1.1 | gene | 77148420 | 77149821 | 77148420 | ID=MS.gene71685 |
| chr1.1 | mRNA | 77148420 | 77149821 | 77148420 | ID=MS.gene71685.t1;Parent=MS.gene71685 |
| chr1.1 | exon | 77148420 | 77148422 | 77148420 | ID=MS.gene71685.t1.exon1;Parent=MS.gene71685.t1 |
| chr1.1 | CDS | 77148420 | 77148422 | 77148420 | ID=cds.MS.gene71685.t1;Parent=MS.gene71685.t1 |
| chr1.1 | exon | 77148671 | 77148828 | 77148671 | ID=MS.gene71685.t1.exon2;Parent=MS.gene71685.t1 |
| chr1.1 | CDS | 77148671 | 77148828 | 77148671 | ID=cds.MS.gene71685.t1;Parent=MS.gene71685.t1 |
| chr1.1 | exon | 77149231 | 77149372 | 77149231 | ID=MS.gene71685.t1.exon3;Parent=MS.gene71685.t1 |
| chr1.1 | CDS | 77149231 | 77149372 | 77149231 | ID=cds.MS.gene71685.t1;Parent=MS.gene71685.t1 |
| chr1.1 | exon | 77149482 | 77149551 | 77149482 | ID=MS.gene71685.t1.exon4;Parent=MS.gene71685.t1 |
| chr1.1 | CDS | 77149482 | 77149551 | 77149482 | ID=cds.MS.gene71685.t1;Parent=MS.gene71685.t1 |
| chr1.1 | exon | 77149652 | 77149821 | 77149652 | ID=MS.gene71685.t1.exon5;Parent=MS.gene71685.t1 |
| chr1.1 | CDS | 77149652 | 77149821 | 77149652 | ID=cds.MS.gene71685.t1;Parent=MS.gene71685.t1 |
| Gene Sequence |
| Protein sequence |
